View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4578-Insertion-7 (Length: 604)
Name: NF4578-Insertion-7
Description: NF4578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4578-Insertion-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 496; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 25 - 604
Target Start/End: Original strand, 36929907 - 36930505
Alignment:
| Q |
25 |
caaataagaaggcatagattacaattgcttttaattgatgagttggagaacttgttaggttagcacttagcagtagcacttaaccagaataaat------ |
118 |
Q |
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| T |
36929907 |
caaataagaaggcatagattacaattgcttttaattgatgagttggagaacttgttaggttagcacttagcagtagcacttaaccagaataaatatagat |
36930006 |
T |
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| Q |
119 |
------------cctcgtgttttcgcacatgtatcactttaggcaaaatacatcctgcgacccttttaatcgatctaatagtatcatactagtcctttta |
206 |
Q |
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| T |
36930007 |
tactagtaaaatcctcgtgttttcgcacatgtatcactttaggcaaaatacatcctgcgacccttttaatcgatctaatagtatcatactagtcctttta |
36930106 |
T |
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| Q |
207 |
gttttccatccaactccgataaatcgatgtttatgtggttgtcttaatgttaatgtgcactttatgtgcttatgttgcctctaaaattacaattgactca |
306 |
Q |
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| T |
36930107 |
gttttccgtccaactccgataaatcgatgtttatgtggttgtcttaatgttaatgtgcactttatgtgcttatgttgcctctaaaattacaattgactca |
36930206 |
T |
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| Q |
307 |
ttatgttatctgattcctccccaattcattattgtccccttcacaaaaccctaaatttcataattagattcattgcatttatggaagaaaaatcaaaaca |
406 |
Q |
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| T |
36930207 |
ttatgttatctgattcctccccaattcattattgtccccttcacaaaaccctaaatttcataattagattcattgcatttatggaagaaaaatcaaaaca |
36930306 |
T |
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| Q |
407 |
ttaatttcaatctcatattatatcaccttcttattctccatatcaccatcaacccaacacaattcaccattcacaaatagatgaaaccatt-nnnnnnnn |
505 |
Q |
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| T |
36930307 |
ttaatttcaatctcatattatatcaccttcttattgtccataacaccatcaacccaacacaattcaccattcacaaatagatgaaaccattaaaaaaaaa |
36930406 |
T |
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| Q |
506 |
caaaatccatgaaatacttaaaggactaatctaatctaatactataattaaagaagttatgagtgcacaaagattacttaaaggactaatccaatataa |
604 |
Q |
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| T |
36930407 |
caaaatccatgaaatacttaaaggactaatctaatctaatactataattaaagaagttatgagtgcacaaagattacttaaaggactaatccaatataa |
36930505 |
T |
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