View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4578_high_1 (Length: 385)

Name: NF4578_high_1
Description: NF4578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4578_high_1
NF4578_high_1
[»] chr3 (9 HSPs)
chr3 (6-377)||(13307965-13308336)
chr3 (6-377)||(10149521-10149892)
chr3 (6-377)||(14694316-14694687)
chr3 (6-377)||(10780910-10781281)
chr3 (6-170)||(16467033-16467197)
chr3 (6-170)||(16470903-16471067)
chr3 (6-108)||(15201042-15201144)
chr3 (6-124)||(14135452-14135570)
chr3 (6-91)||(15240246-15240331)
[»] chr2 (8 HSPs)
chr2 (6-370)||(23201723-23202087)
chr2 (6-370)||(23675564-23675928)
chr2 (6-370)||(22637051-22637415)
chr2 (6-369)||(24910629-24910992)
chr2 (6-369)||(23815637-23816000)
chr2 (11-108)||(19118882-19118979)
chr2 (18-93)||(25117532-25117607)
chr2 (6-114)||(25565560-25565668)
[»] chr7 (6 HSPs)
chr7 (6-370)||(18172730-18173094)
chr7 (6-377)||(14343746-14344117)
chr7 (6-370)||(15763749-15764112)
chr7 (14-370)||(11978017-11978373)
chr7 (117-377)||(18134625-18134885)
chr7 (6-123)||(18139895-18140012)
[»] scaffold0130 (1 HSPs)
scaffold0130 (6-370)||(37335-37699)
[»] chr6 (6 HSPs)
chr6 (6-377)||(23433831-23434201)
chr6 (6-377)||(19036267-19036637)
chr6 (6-370)||(1552263-1552626)
chr6 (6-246)||(16211719-16211959)
chr6 (8-186)||(19270432-19270610)
chr6 (6-73)||(17801880-17801947)
[»] chr4 (3 HSPs)
chr4 (6-370)||(13290464-13290828)
chr4 (6-377)||(14773657-14774028)
chr4 (8-351)||(18564918-18565261)
[»] chr8 (4 HSPs)
chr8 (6-377)||(17423944-17424315)
chr8 (6-377)||(22349854-22350225)
chr8 (6-370)||(22066494-22066858)
chr8 (174-377)||(15913038-15913241)
[»] scaffold0022 (1 HSPs)
scaffold0022 (6-370)||(16129-16493)
[»] scaffold0080 (1 HSPs)
scaffold0080 (6-370)||(4307-4671)
[»] scaffold0040 (1 HSPs)
scaffold0040 (6-377)||(28414-28775)
[»] chr5 (6 HSPs)
chr5 (6-369)||(21509723-21510086)
chr5 (6-361)||(26271951-26272305)
chr5 (6-108)||(22853604-22853706)
chr5 (11-108)||(23658369-23658466)
chr5 (11-108)||(23800104-23800201)
chr5 (21-153)||(25557181-25557313)
[»] scaffold0001 (1 HSPs)
scaffold0001 (6-377)||(127813-128183)
[»] chr1 (3 HSPs)
chr1 (6-377)||(22806927-22807298)
chr1 (6-371)||(41381419-41381784)
chr1 (80-369)||(21166246-21166535)
[»] scaffold0108 (1 HSPs)
scaffold0108 (6-370)||(24941-25305)
[»] scaffold0023 (3 HSPs)
scaffold0023 (6-370)||(64065-64429)
scaffold0023 (6-370)||(73243-73607)
scaffold0023 (6-159)||(4723-4876)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-377)||(65702-66073)
[»] scaffold0026 (1 HSPs)
scaffold0026 (6-369)||(140060-140423)
[»] scaffold0656 (1 HSPs)
scaffold0656 (6-370)||(3775-4139)
[»] scaffold0064 (1 HSPs)
scaffold0064 (6-370)||(38690-39053)
[»] scaffold0282 (1 HSPs)
scaffold0282 (6-377)||(6628-6999)
[»] scaffold0019 (1 HSPs)
scaffold0019 (6-370)||(160163-160527)
[»] scaffold0423 (1 HSPs)
scaffold0423 (6-370)||(3836-4200)
[»] scaffold0046 (1 HSPs)
scaffold0046 (6-313)||(32485-32791)
[»] scaffold0740 (1 HSPs)
scaffold0740 (6-187)||(280-461)
[»] scaffold0016 (1 HSPs)
scaffold0016 (6-370)||(180400-180764)
[»] scaffold0362 (1 HSPs)
scaffold0362 (6-304)||(13203-13501)
[»] scaffold0319 (1 HSPs)
scaffold0319 (6-199)||(8620-8813)
[»] scaffold0013 (6 HSPs)
scaffold0013 (6-370)||(146525-146889)
scaffold0013 (6-370)||(82514-82878)
scaffold0013 (6-370)||(120186-120550)
scaffold0013 (126-370)||(147685-147929)
scaffold0013 (6-130)||(133280-133404)
scaffold0013 (6-130)||(137809-137933)
[»] scaffold0029 (1 HSPs)
scaffold0029 (6-369)||(68765-69128)
[»] scaffold0053 (1 HSPs)
scaffold0053 (29-370)||(43376-43717)
[»] scaffold0008 (1 HSPs)
scaffold0008 (6-351)||(134699-135044)
[»] scaffold0241 (1 HSPs)
scaffold0241 (271-377)||(10472-10578)
[»] scaffold1714 (1 HSPs)
scaffold1714 (6-93)||(1358-1445)
[»] scaffold0757 (1 HSPs)
scaffold0757 (6-92)||(1868-1954)
[»] scaffold0401 (2 HSPs)
scaffold0401 (22-108)||(1397-1483)
scaffold0401 (251-371)||(1626-1746)
[»] scaffold0063 (1 HSPs)
scaffold0063 (6-108)||(45761-45863)


Alignment Details
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 13308336 - 13307965
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
13308336 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 13308237  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||||||||    
13308236 agccagaacgaataggttccctaagaaagagaaagttgcttatatcgatactagggatagtgagccagaattcgattggggttccgattctgtagaagat 13308137  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| |  |||||| ||||||||||||    
13308136 aacgaaataaatctcgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgcagaagaacccaaaaatgata 13308037  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
13308036 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctgatg 13307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 6 - 377
Target Start/End: Original strand, 10149521 - 10149892
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||||| |||||||||||    
10149521 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 10149620  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||||| || |||||||||||||||    
10149621 agccaaaacaaataggttccctaagaaagagaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagat 10149720  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| || |||||| | ||||||||||    
10149721 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaatgggaaaaacgtagaagaaccaaaaaatgata 10149820  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
10149821 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagttgctgatg 10149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 14694687 - 14694316
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
14694687 tagattattctgtccgaaagaaattggatatacaataccttagggatatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 14694588  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| | |||||||||||||||  |||||||| ||||||    
14694587 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggaaagtgagccagaattcgattggggtttcgattctgtcgaagat 14694488  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |||||| |||||||||| ||||||||||||||||  ||||||||||| ||||| |||||||||||||| |||||||| || |||||| ||||||||||||    
14694487 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagaacccaaaaatgata 14694388  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
14694387 aatatcccccaaaaacttatacttttgatgtgtctaagtgtgaagaaatattcgatcttttagttgctgatg 14694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 6 - 377
Target Start/End: Original strand, 10780910 - 10781281
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| || ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
10780910 tagattattccgtccgaaagaaattggatacacaataccttagggacatggcacaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 10781009  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || || |||||||| |||||||||||||| ||||||| ||| ||||| |||||||||||||||| | |||||||||||||||  ||||| || || ||     
10781010 ggccaggacaaatagattccctaagaaagaaaaagttggttacatcgaaactggggatagtgagccagaattcgattggggtttcgattccgttgaggac 10781109  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    ||||||||||||||||| || |||||||| ||||  |||||||||||||||||||||||||||||||| || ||||| || |||||  |||||||| |||    
10781110 agcgaaataaatctcgcggagttaaaagaagggccgccttacacttgcaaattgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaattata 10781209  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||| ||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||    
10781210 aatatccctcaaaaacttatacgtttgatgtatctaaaagcgaagaaatatttgatcttttagttgctgatg 10781281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 16467033 - 16467197
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
16467033 tagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaa 16467132  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagc 170  Q
    ||| | |||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
16467133 agccaaaacaaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagc 16467197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 16471067 - 16470903
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
16471067 tagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaa 16470968  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagc 170  Q
    ||| | |||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
16470967 agccaaaacaaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagc 16470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 15201042 - 15201144
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| |||||| ||| ||||||||||||||  |||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| || ||||||||    
15201042 tagactattctattcaaaagaaattagatatgcaatatctaagagatatggcacaattagcagatagagtccgacaagtcgaaagacttaaagctgaaaa 15201141  T
106 agc 108  Q
    |||    
15201142 agc 15201144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 14135452 - 14135570
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| |||||| ||| ||||||| |||||||||||||||| || || ||||| |||||||| ||||||||| | ||||| | |||||| || | ||||||    
14135452 tagactattctattcaaaagaaactagatacacaatatctaagagatatggcacaattagctgatagagtctgacaagtcggaagacttaaagatgaaaa 14135551  T
106 agctagaacaaataggttc 124  Q
    ||| || || |||||||||    
14135552 agcaaggactaataggttc 14135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 15240246 - 15240331
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaaga 91  Q
    |||| |||||| ||| ||||||||||||||  |||||||| || || || ||||||||||||||||||||||| ||||| ||||||    
15240246 tagactattctattcaaaagaaattagatatgcaatatctaagagatatagcgcaattagcagatagagtccgacaagtcgaaaga 15240331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 289; Significance: 1e-162; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 23202087 - 23201723
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
23202087 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 23201988  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
23201987 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagat 23201888  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||||    
23201887 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23201788  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
23201787 aatatcccctaaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatcttctagtt 23201723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 23675928 - 23675564
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
23675928 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 23675829  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
23675828 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagat 23675729  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||||    
23675728 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23675629  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
23675628 aatatcccctaaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatcttctagtt 23675564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 22637051 - 22637415
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||||||||||    
22637051 tagattattttgttcgaaagaaattagatacacaatatcttagggacatggcgaaattagcagatagggttcaccaagtggaaagactcaaggctgaaaa 22637150  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
22637151 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagctagaattcgattggggttcagattctgtagaagat 22637250  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| | |||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||    
22637251 aacgaaataaatcttgtagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 22637350  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
22637351 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 22637415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 369
Target Start/End: Original strand, 24910629 - 24910992
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| || ||||| |||||||||||    
24910629 tagattattctgttcggaagaaattagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagtcgagagacttaaggctgaaaa 24910728  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| || |||    
24910729 agccagaacaaataggttccctaagaaagaaaaagttgcttatgtcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 24910828  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||||||||||||||| ||||||||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||| | || ||| | ||||||||||    
24910829 aacgaaataaatctcgcggaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaggaacctaaaaatgata 24910928  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 369  Q
    | |||| ||| ||||| || ||||| ||||| |||||||||||||| || ||||||||| ||||    
24910929 agtatcacccgaaaacatacactttcgatgtatctaaatgtgaagagatttttgatcttctagt 24910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 369
Target Start/End: Original strand, 23815637 - 23816000
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||| |||||| || ||||| || || ||||| || ||||| || || ||||| |||||||| ||||| |||||||| |||||||||||    
23815637 tagattattctgttctaaagaagttggatactcagtaccttagagatatggcacagttggcagacagagtccgacaagtcgaaagacttaaggctgaaaa 23815736  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    | |  | ||||| | |||||| || |  ||||||||||| || || || ||  | || ||||| | | ||| |||||  || ||  || |||| ||||||    
23815737 accccggacaaacaagttccccaaaagggagaaagttgcctacatagacacaagagacagtgacccagaatacgattaagggtcatatactgtcgaagat 23815836  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |  ||| | ||||| | ||||||||||||||| |  || ||  ||||||||||  |||||||||| ||||| ||||||   |||||| | ||||| || |    
23815837 aatgaagttaatcttgtagaattaaaagatggaccgccctatgcttgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaacgaca 23815936  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 369  Q
    ||||||| |  ||||| |||||||| ||||| |||||||||||||| || || ||||| |||||    
23815937 aatatcctcttaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatctcttagt 23816000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 19118979 - 19118882
Alignment:
11 tattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 108  Q
    |||||| ||||||||||||||||||| || ||||| || || ||||| ||||||||||||||| |||| ||||| |||||||  || |||||||||||    
19118979 tattctattcgaaagaaattagatacgcagtatctaagagatatggcacaattagcagatagaatccgacaagtcgaaagacataaagctgaaaaagc 19118882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 25117607 - 25117532
Alignment:
18 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagact 93  Q
    ||||||||||||||||||| || ||||| || || ||||  ||| |||||||||||||||| ||||| ||||||||    
25117607 ttcgaaagaaattagatactcagtatctaagagatatggtacaactagcagatagagtccgacaagtcgaaagact 25117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 25565560 - 25565668
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||  |||| |||||||||||||| ||| |  | || |||||||| ||||| || |||||||| |  ||  | |||||||| |||||||||||    
25565560 tagattattccattcggaagaaattagatactcaacacttgagagacatggctcaattggccgatagagttcaacatttcgaaagactaaaggctgaaaa 25565659  T
106 agctagaac 114  Q
    ||| |||||    
25565660 agccagaac 25565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 18173094 - 18172730
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||    
18173094 tagattattctgttcgaaagaaagtagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagttgaaagactcaaggctgaaaa 18172995  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||    
18172994 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactgaggatagtgagccagaattcgattggggttcagattctgtagaagat 18172895  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||| ||||||||||  ||||||||||||||||| || |||||||||||||| ||||| || |||||| ||||||||||||    
18172894 aacgaaataaatcttgcagaattgaaagatgggccgccttacacttgcaaattattgaggccatcaaatggaaaaaacgtagaagaacccaaaaatgata 18172795  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
18172794 agtatcccccgaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 18172730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 14344117 - 14343746
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
14344117 tagattattccgtccgaaagaaattggatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 14344018  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | | |||||||||||||||  |||||||| ||||||    
14344017 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 14343918  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||| || ||||| || |||||  ||||||||||||    
14343917 agcgaaataaatctcgcggaattaaaagatgggccaccttacacttgtaaaatgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaatgata 14343818  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
14343817 aatatccccccaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctgatg 14343746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 15763749 - 15764112
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||    
15763749 tagattattctattcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaaa 15763847  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| || |||    
15763848 agccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 15763947  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||| ||||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||  ||||| |||||| | |||||| | ||||||||||    
15763948 aacgaagtaaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgata 15764047  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    | |||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||| |||||    
15764048 agtatcccccaaaaacatatagttttgatgtatctaaatgtgaagagatttttgatcttctagtt 15764112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 370
Target Start/End: Complemental strand, 11978373 - 11978017
Alignment:
14 tctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaa 113  Q
    |||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||| || |||||||||||||| || |    
11978373 tctgttcggaaaaaattagatacacaatatcttagggatatggcacaattagcagatagagtctgccaagctgaaaggcttaaggctgaaaaagccagga 11978274  T
114 caaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaat 213  Q
    |||||||||||||||||||||| || |||||||||||||||||| | |||||||| | | ||||||||||||| ||||| ||||| || |||| ||||||    
11978273 caaataggttccctaagaaagaaaaggttgcttatatcgatactcgagatagtgatccagaattcgattggggatctgagtctgttgatgataacgaaat 11978174  T
214 aaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatccc 313  Q
    |||||| |||||||||||||||||||   |||| ||||| || ||  ||||| |||||||||| |||||| |||||||| | ||||||||||||||||||    
11978173 aaatcttgcagaattaaaagatgggccggcttatacttgtaagttactaaggtcatcaaatggaaaaaatctggaagaacctaaaaatgataaatatccc 11978074  T
314 ccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    || ||||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
11978073 ccgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 11978017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 117 - 377
Target Start/End: Complemental strand, 18134885 - 18134625
Alignment:
117 ataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaa 216  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||| | | |||||||||||||  ||||| || || ||||||||| ||||    
18134885 ataggttccctaagaaagaaaaagttgcttatatcgaagctggggatagtgagccagagttcgattggggtttcgattccgtcgaggatagcgaagtaaa 18134786  T
217 tctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatccccca 316  Q
    ||||||  |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||| || ||||| ||||||||||||||||||||||||    
18134785 tctcgcgaaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaacggaaaaaacgtagaagagtccaaaaatgataaatatccccca 18134686  T
317 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
18134685 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctgatg 18134625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 18140012 - 18139895
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
18140012 tagattattctgttcgaaagaaattagatacacaataccttagagacatggcacaattagcagatagagtccgccaagttgaaagactcaaagctgaaaa 18139913  T
106 agctagaacaaataggtt 123  Q
    ||| || |||||||||||    
18139912 agccaggacaaataggtt 18139895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 37335 - 37699
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||    
37335 tagattattctgttcgaaagaaattagatacacaatatcttagggacatagcgcaattagcagatagggttcgccaagtcgaaagactcaaggctgaaaa 37434  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||| ||||  |||||||||    
37435 agccagaacaaataggttccttaagaaagagaaacttgcttatatcgatattggggatagtgagccagaattcgattggggttcagatttagtagaagat 37534  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||    
37535 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 37634  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
37635 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 37699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 6 - 377
Target Start/End: Original strand, 23433831 - 23434201
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||    
23433831 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagtagatagggttcgccaagtcgaaagactcaaggctgaaaa 23433930  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||| |||| ||||||||||    
23433931 agccagaacgaataggttccctaagaaagagaaagttgcttatattgatactggg-atagtgagccagaattcgattggggttcagattatgtagaagat 23434029  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  |||| |||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||    
23434030 aacgaaataaatcttgcagaattaaaagatgggccgcctttcacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23434129  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
23434130 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtttatgatg 23434201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 19036637 - 19036267
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||    
19036637 tagattattctattcgaaagaaattagatacacaatatcatagggacatggcgcaattagcagatagagttcgccaagtcgagagacttaaggctgaaaa 19036538  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||||||| | ||||||||||||| || |||||||||||||||    
19036537 agccagaacaaatagattccctaagaaagagaaatttgcttatatagatactggagatagtgagccagaattcgattggggatcagattctgtagaagat 19036438  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
19036437 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggcc-tcaaatgggaaaaatgtagaagaacccaaaaatgata 19036339  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
19036338 aatatcccccaaaaacttatacttttaatgtgtctaaatgtgaagaaatatttgatcttctagttgctgatg 19036267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 1552626 - 1552263
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||    
1552626 tagattattctattcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaaa 1552528  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| || |||    
1552527 agccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 1552428  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||| ||||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||  ||||| |||||| | |||||| | ||||||||||    
1552427 aacgaagtaaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgata 1552328  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    | |||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||| |||||    
1552327 agtatcccccaaaaacatatagttttgatgtatctaaatgtgaagagatttttgatcttctagtt 1552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 16211719 - 16211959
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| || ||||  || ||||||||    
16211719 tagattattctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacataaagctgaaaa 16211818  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| |||||     
16211819 ggccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagaa 16211918  T
206 agcgaaataaatctcgcagaattaaaagatgggcaacctta 246  Q
    | |||||||||||||||||||||||| ||||||| ||||||    
16211919 aacgaaataaatctcgcagaattaaaggatgggccacctta 16211959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 19270610 - 19270432
Alignment:
8 gattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaag 107  Q
    |||||||  |||||||||||  | ||||| ||||| |||||||| ||||| ||||||||||||| ||| || ||||| ||||| || |||||||| ||||    
19270610 gattatttcgttcgaaagaatatggatactcaataccttagggatatggcacaattagcagatatagttcgacaagtcgaaaggcttaaggctgagaaag 19270511  T
108 ctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattgggg 186  Q
    |  |||||||||||||||| || |  ||||||||||| ||| | || || || || ||||| | | |||||||||||||    
19270510 cccgaacaaataggttcccaaaaagggagaaagttgcctatgtagacacaggagacagtgacccagaattcgattgggg 19270432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 17801947 - 17801880
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagataga 73  Q
    |||| |||||| ||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||    
17801947 tagactattctattcgaaagaaattagatacgcagtatctaagggatatggcgcaattagcagataga 17801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 13290828 - 13290464
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||    
13290828 tagattattctgttcgaaagaaattagatacacaatatattagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaa 13290729  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||| ||||||| ||| |||    
13290728 ggccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgaaccagaattcgattggggttcagattctggagaggat 13290629  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||||||||||    
13290628 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 13290529  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
13290528 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 13290464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 14774028 - 14773657
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||| || ||||||||    
14774028 tagattattctattcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 14773929  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     |  |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
14773928 ggtcagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagat 14773829  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||| || ||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||||||||||||||    
14773828 aacgaaataaatcttgcagaattgaaggatgggccaccttatacttgtaacttattaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgata 14773729  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||| |||| ||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
14773728 aatatcccccgaaaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 14773657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 351
Target Start/End: Complemental strand, 18565261 - 18564918
Alignment:
8 gattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaag 107  Q
    |||||||||||||||||||| || || || ||||| ||||| || |||||  |  | ||||| |||||||| ||||| ||||| || |||||||||||||    
18565261 gattattctgttcgaaagaagttggacactcaataccttagagatatggcatagctggcagacagagtccgacaagtcgaaaggcttaaggctgaaaaag 18565162  T
108 ctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatag 207  Q
    |  | |||| || |||||||||||  ||||||||||| ||  | || |||||  | ||||| | | ||||||||||||| || ||| |||| |||||||     
18565161 cccggacaagtaagttccctaagagggagaaagttgcctacgtagacactggaaacagtgacccagaattcgattgggggtcagatactgtcgaagataa 18565062  T
208 cgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaa 307  Q
     ||||||||||| ||||||||||||||||| |  |  ||  | ||||||||  |||||||||| ||||| ||||||   |||||| | |||||||| |||    
18565061 tgaaataaatcttgcagaattaaaagatggaccgctctatgcctgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaatgacaaa 18564962  T
308 tatcccccaaaaacttatacttttgatgtgtctaaatgtgaaga 351  Q
    ||||| || ||||| |||||||| ||||| ||||||||||||||    
18564961 tatcctcctaaaacatatactttcgatgtttctaaatgtgaaga 18564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 17424315 - 17423944
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
17424315 tagattattctgttcgaaagaaattagatacacagtatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 17424216  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||    |||||||||| |||    
17424215 agccagaacaaataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccaaaattcgattggggtcacaattctgtagaggat 17424116  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |||||||||||||||||||||||||| ||| |||  ||||||| ||||||||| || ||||||||||| |||||||| || |||||  |||||||||| |    
17424115 agcgaaataaatctcgcagaattaaaggataggccgccttacatttgcaaattattgaggccatcaaacgggaaaaacgtagaagagcccaaaaatgaca 17424016  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
17424015 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttttagttgctgatg 17423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 22350225 - 22349854
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||    
22350225 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 22350126  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
22350125 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagat 22350026  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||| |||||||||||||||||||  ||||| ||||| || || |||||||||| |||||| ||||| || ||||| |||||||||||||    
22350025 aacgagataaatcttgcagaattaaaagatgggccgccttatacttgtaagttattaaggccataaaatggaaaaaacgtagaagagtccaaaaatgata 22349926  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||    
22349925 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatctcctagttgctgatg 22349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 22066494 - 22066858
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  | |||||||||||    
22066494 tagactattctgttcggaagaaattagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaaggtttaaggctgaaaa 22066593  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| || ||||||||||||||||||||||| |  ||||||||||| |||||||| |||||||| | | ||||||||||||| ||| | ||||| || |||    
22066594 agccaggacaaataggttccctaagaaagaaatggttgcttatatagatactggagatagtgatccagaattcgattggggatctaaatctgttgatgat 22066693  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||||||||||||||||||||||| |||||| ||||| || ||  |||||||||||||||| |||||| | |||||| | ||||||||||    
22066694 aacgaaataaatctcgcagaattaaaagatgggccaccttatacttgtaagttactaaggccatcaaatggaaaaaatctagaagaacctaaaaatgata 22066793  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    |||||||||| | ||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
22066794 aatatcccccgataacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 22066858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 377
Target Start/End: Original strand, 15913038 - 15913241
Alignment:
174 aattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaa 273  Q
    ||||||||| ||| || ||| |||| |||||||  || || |||||||||||||||||||||||||  | |||  | || ||| ||||||||||||| ||    
15913038 aattcgattagggatcagatactgtcgaagataatgagattaatctcgcagaattaaaagatgggcctctttatgcatgtaaactgttaaggccatcgaa 15913137  T
274 tgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgat 373  Q
    ||| ||||||   |||||| | || ||||| ||||| || || ||||| ||||  |||||||| ||||| || || ||||| ||||||||||| |||| |    
15913138 tggaaaaaatcctgaagaaccaaagaatgacaaataccctcctaaaacatatatctttgatgtttctaagtgcgaggaaatctttgatcttttggttgct 15913237  T
374 gatg 377  Q
    ||||    
15913238 gatg 15913241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 16129 - 16493
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
16129 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 16228  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| | |||||| ||||||||| ||||||||||| |||    
16229 agccagaacaaataggttccctaataaagagaaagttgcttatatcgatactggtgattgtgagccagaattcgtttggggttcagattctgtagatgat 16328  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||| ||||||    
16329 aacgatataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaacatgata 16428  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
16429 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 4307 - 4671
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| || ||||| |||||||||||    
4307 tagattattctattcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagacagggttcgccaagtcgagagacttaaggctgaaaa 4406  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
4407 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgtggaagat 4506  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  |||||||| || ||||||||||||||||||||||| ||||| || |||||||||||||||| ||    
4507 aacgaaataaatcttgcagaattaaaagatgggccgccttacacctgtaaattgttaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgtta 4606  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||    
4607 aatatcccccaaaaacttatacttttgatgtatctaagtgtgaagagatatttgatcttctagtt 4671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 377
Target Start/End: Original strand, 28414 - 28775
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||       ||||||  ||| ||| |||||||||||    
28414 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattag---ata-------ccaagtcaaaaaacttaaggctgaaaa 28503  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| |||||||||||||||    
28504 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggttcagattctgtagaagat 28603  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||||||||||    
28604 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 28703  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
28704 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagagatatttgatcttctagttgctgatg 28775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 6 - 369
Target Start/End: Original strand, 21509723 - 21510086
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||| || ||||| |||||||||||    
21509723 tagattattctgttcgaaagaaattagatacataatatcttagggacatggcacaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 21509822  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||| |||||||| ||||||    
21509823 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctgttgaagat 21509922  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||| |||||||||||||||||||  | ||||||||| ||||| ||||||||||||||||||||||| || |||||  ||||||||||||    
21509923 aacgagataaatcttgcagaattaaaagatgggccgctttacacttgtaaattattaaggccatcaaatgggaaaaacgtagaagagcccaaaaatgata 21510022  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 369  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
21510023 aatatcccccaaaaacttatacctttgatgtatctaaatgtgaagaaatatttgatcttctagt 21510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 361
Target Start/End: Complemental strand, 26272305 - 26271951
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| || ||||| |||||||||||    
26272305 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgagagacttaaggctgaaaa 26272206  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||| |||||| | || |||    
26272205 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctattgaggat 26272106  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||| |||||| ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||| || |||||  ||||||| ||||    
26272105 aacgagataaatcttgcagaactaaaagatgggccgccttacacttgtaaattgttgaggccatcaaatgggaaaaacgtagaagagcccaaaaa-gata 26272007  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgat 361  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
26272006 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgat 26271951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 22853706 - 22853604
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| |||||| ||| ||||||||||||||| || ||||| || || ||| | ||| ||||||||||| |||| |||||||||||||| || ||||||||    
22853706 tagactattctattcaaaagaaattagatactcagtatctaagagatatgacacaactagcagatagactccgacaagttgaaagacttaaagctgaaaa 22853607  T
106 agc 108  Q
    |||    
22853606 agc 22853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 23658369 - 23658466
Alignment:
11 tattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 108  Q
    |||||| ||||||| ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||||  |||||||| || |||||||||||    
23658369 tattctattcgaaataaattagatacgcagtatctaagagatatggcacagttagcagatagagtccgacaagccgaaagacttaaagctgaaaaagc 23658466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 23800201 - 23800104
Alignment:
11 tattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 108  Q
    |||||| ||||||| ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||||  |||||||| || |||||||||||    
23800201 tattctattcgaaataaattagatacgcagtatctaagagatatggcacagttagcagatagagtccgacaagccgaaagacttaaagctgaaaaagc 23800104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 25557181 - 25557313
Alignment:
21 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 120  Q
    ||||||||||||| || | |||| | | ||||||||  ||||| ||||||| ||| |  |||||||| || ||||| |||||||| ||||| |||| ||     
25557181 gaaagaaattagacactcgatatttaatggacatggtccaattggcagataaagttcaacaagttgagaggctcaaagctgaaaaggctaggacaagtaa 25557280  T
121 gttccctaagaaagagaaagttgcttatatcga 153  Q
     | || ||| |||||||| ||||||||| ||||    
25557281 ataccataaaaaagagaaggttgcttatgtcga 25557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 128183 - 127813
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||| |||||||||||    
128183 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggtgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 128084  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||| ||| ||||||    
128083 agccagaacaaataggttccctaacaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattttgttgaagat 127984  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |  || |||||||| |||||||||||||||||||  ||||||||||| || |  ||||||||||||||||||||||| || ||||| ||||||||||||     
127983 aatgagataaatcttgcagaattaaaagatgggccgccttacacttgtaagtcattaaggccatcaaatgggaaaaacgtagaagagtccaaaaatgat- 127885  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||    
127884 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagttgctgatg 127813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 22807298 - 22806927
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| || ||||| || ||||||||    
22807298 tagattattctgttcaaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 22807199  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| ||||||||||||||| || |||||||| ||||||    
22807198 ggccagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccaaaattcgattggggatccgattctgttgaagat 22807099  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||| |||||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||| ||||||||||    
22807098 aacgaaataaatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgata 22806999  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
22806998 aatatcccccgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 22806927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 371
Target Start/End: Complemental strand, 41381784 - 41381419
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||    
41381784 tagattattccgtccgaaagaaattggatacacaataccttagagacatggcacaattagcaaatagggtccgccaagtggaaagactcaaggctgaaaa 41381685  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || || ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| | |||||||||||||||   |||| || || |||    
41381684 ggccaggacaaataggttccctaagaaagataaagttgcttacatcgaaactggggatagtgagccagaattcgattggggtttcaattccgttgaggat 41381585  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |||||| |||||||||| || |||||||| ||||  |||||||||| |||||| ||||||| |||||| ||||||||||| |||||  ||||||| ||||    
41381584 agcgaagtaaatctcgcggagttaaaagaggggccgccttacactttcaaattattaaggcaatcaaacgggaaaaatgtagaagagcccaaaaacgata 41381485  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 371  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
41381484 aatatcccccaaaaacttatacttttgatgtatctaaatgcgaagaaatatttgatcttttagttg 41381419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 80 - 369
Target Start/End: Complemental strand, 21166535 - 21166246
Alignment:
80 caagttgaaagactcaaggctgaaaaagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcg 179  Q
    ||||| ||||| || |||||||| |||||  | | |||||| ||||||||||| ||||||||||| ||| | ||||| || || ||||| | | ||||||    
21166535 caagtcgaaaggcttaaggctgagaaagcccggagaaatagattccctaagaaggagaaagttgcctatgtggataccggagacagtgatccagaattcg 21166436  T
180 attggggttctgattctgtagaagatagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaa 279  Q
    ||||||| || ||| |||| |||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||| ||    
21166435 attgggggtcagatactgtcgaagataatgaaataaatctcgcagaattaaaagatgggccaccttatacctgcaaattattaaggccatcaaatggcaa 21166336  T
280 aaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 369  Q
    |||    |||||| | |||||||| |||||||| || ||||| ||||| |||||||| |||||||||||||| || || |||||||||||    
21166335 aaaccatgaagaacctaaaaatgacaaatatcctccgaaaacatatacctttgatgtttctaaatgtgaagagatcttcgatcttttagt 21166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 24941 - 25305
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  || |||||||| |||||||| |||||||||||    
24941 tagattattctgttcgaaagaaattagacacccaatatcttagggacatggcgcaattagcagataaggttcgccaagtcgaaagacttaaggctgaaaa 25040  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||| | ||||||||||||| || |||||||||||||||    
25041 ggccagaacaaataggttccttaagaaagagaaagtcgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagat 25140  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| || ||||| |||||||||| |||||||||||| ||| | || |||||||| || |||||||| || || ||| ||||||| ||||    
25141 aacgaaataaatcttgcggaattgaaagatgggccaccttacacttgtaaagtattgaggccatcgaacgggaaaaacgtagaggaacccaaaaacgata 25240  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
25241 aatatcccccaaaaacttaaacttttgaagtgtctaaatgcgaagaaatatttgatcttctagtt 25305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 217; Significance: 1e-119; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 64065 - 64429
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||    
64065 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 64164  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || || ||||   |||||    
64165 agccagaacaaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagat 64264  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||| |||||||||||||||||||   |||| ||||| || || ||||||||||||| ||| ||||| || ||||| | |||||||||||    
64265 aacgagataaatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgata 64364  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
64365 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagtt 64429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 73243 - 73607
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||    
73243 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 73342  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || || ||||   |||||    
73343 agccagaacaaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagat 73442  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||| |||||||||||||||||||   |||| ||||| || || ||||||||||||| ||| ||||| || ||||| | |||||||||||    
73443 aacgagataaatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgata 73542  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
73543 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagtt 73607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 4876 - 4723
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||||| ||||    
4876 tagattattctgttcggaagaagttagatacacaataccttagggatatggcacaattagtagatagagtccgccaagttgagagacttaaggctaaaaa 4777  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactgg 159  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||    
4776 agctagaacaaattggttccctaagaaagaaaaagttgcttatatcgacactgg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 6 - 377
Target Start/End: Original strand, 65702 - 66073
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||| || ||||||||    
65702 tagattattctattcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 65801  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     |  |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
65802 ggtcagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagat 65901  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||| || ||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||| ||||||||||    
65902 aacgaaataaatcttgcagaattgaatgatgggccaccttatacttgtaatttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgata 66001  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||| |||| ||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
66002 aatatcccccgaaaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 66073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 6 - 369
Target Start/End: Complemental strand, 140423 - 140060
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||| || ||||| ||| |||||||    
140423 tagattattctgtttgaaagaaattagatacacaataccttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaagtctgaaaa 140324  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
140323 ggccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagat 140224  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| ||||||||||| |||||||  ||||| ||||| ||  |  |||||||||||||||||||||| || |||||||||||||||||||    
140223 aacgaaataaatcttgcagaattaaaggatgggccgccttatacttgtaagctactaaggccatcaaatgggaaaaacgtagaagaatccaaaaatgata 140124  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 369  Q
    |||||||||| ||||| || ||||| ||||| ||||||||||||||||| ||||||||| ||||    
140123 aatatcccccgaaaacgtacactttcgatgtatctaaatgtgaagaaatttttgatcttctagt 140060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 3775 - 4139
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||| ||||| |||||||||||    
3775 tagattattctgttccaaagaaactagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagttgagagacttaaggctgaaaa 3874  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| | ||||||||||| | || |||||||| || |||    
3875 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggtgatcagattctgttgatgat 3974  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||| |||||||||||| | |||||| | ||||||||||    
3975 aacgaaataaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccatcgaatgggaaaaatttagaagaacctaaaaatgata 4074  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    | |||||||| ||||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
4075 agtatcccccgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 4139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 39053 - 38690
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||    
39053 tagattattctgttcgaaagaa-ttagacacccaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaa 38955  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     |  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||| || |||| |||||||||     
38954 ggacagaacaaataggttccctaagaaagagaaagtcgcttatatcgatactggagatagtgagccagaattcgattggggatcagattatgtagaagac 38855  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| || ||| | |||||||||| |||||||||||| ||| | || |||||||| ||| ||||||| || || ||| ||||||| ||||    
38854 aacgaaataaatcttgcggaactgaaagatgggccaccttacacttgtaaagtattgaggccatcgaattggaaaaacgtagaggaacccaaaaacgata 38755  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
38754 aatatcccccaaaaacttacacttttgacgtgtctaaatgcgaagaaatatttgatcttctagtt 38690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 377
Target Start/End: Complemental strand, 6999 - 6628
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||  | |||||||| || ||||| || ||||||||    
6999 tagattattctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagtagataggattcgccaagtcgagagacttaaagctgaaaa 6900  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||||||||||||| ||||| |||||| |||| | ||| |||||||||| | ||||| ||||||| ||  ||||||| ||||||    
6899 ggccagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgacattggagatagtgagccagaattcaattggggatccaattctgttgaagat 6800  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||| |||||||| |||||||||| |||||| ||||| || || ||||||| ||||||||| ||||| || |||||||| |||| |||||    
6799 aacgaaataaatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggctatcaaatggaaaaaacgtagaagaatctaaaattgata 6700  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 377  Q
    |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
6699 aatatcccccgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 6628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 160527 - 160163
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||| |||||| || ||||| || || |||||    
160527 tagattattctgttcgaaagaagttagatacacaatatcttagggatatgacacaattagcatatagagtccaccaagtcgagagacttaaagcagaaaa 160428  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| | ||||| ||||||| || |||||||| || |||    
160427 agccagaacaaataggtttcctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcaattggggatcagattctgttgatgat 160328  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||||||||||||||||||||||||||||||||  ||||| ||||| || ||  |||||||||| |||||||||||| |  ||||| | ||||||||||    
160327 aacgaaataaatctcgcagaattaaaagatgggccgccttatacttgtaagttactaaggccatcgaatgggaaaaatataaaagaacctaaaaatgata 160228  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    |||||||||| ||||| || ||||||| ||| |||||||||||||| || ||||||||| |||||    
160227 aatatcccccgaaaacatacacttttgctgtatctaaatgtgaagagatttttgatcttctagtt 160163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 3836 - 4200
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
3836 tagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaa 3935  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| | |||||||||||||||||||||| | ||||||||||||||||||||| | |||||||||| | ||||||||||||| ||||||| ||| || |||    
3936 agccaaaacaaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatctgattatgttgatgat 4035  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||||||||||||||||||||| |  ||||| ||||| || ||  || ||||||||||||| |||||| | |||||| | || |||||||    
4036 aacgaaataaatctcgcagaattaaaagatggaccgccttatacttgtaagttactacggccatcaaatggaaaaaatatagaagaacctaagaatgata 4135  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
     ||||||||| ||||| || ||||||||||| |||||||| ||||| || ||||||||| |||||    
4136 catatcccccgaaaacatacacttttgatgtatctaaatgcgaagagatttttgatcttctagtt 4200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 32485 - 32791
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||||| || || |||||| |||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||| |||||||||||    
32485 tagactattctgttcgcaaaaagttagatgcacaatatcttagggatatggcacaattagcagatag-gtcctccaagttgaaagacttaaggctgaaaa 32583  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||||||||||| || |||    
32584 ggccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattagggatctgattctgttgatgat 32683  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | |||||||||||||| |||||||||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||| | |||||| | || |||||||    
32684 aacgaaataaatctcgtagaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaagaacctaagaatgata 32783  T
306 aatatccc 313  Q
    ||||||||    
32784 aatatccc 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 6 - 187
Target Start/End: Original strand, 280 - 461
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
280 tagattattctgttcgaaagaaattagatacaaaatatcttagggacatggcgcaattagcagatagagttcgccaagtggaaagactcaaggctgaaaa 379  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggt 187  Q
    ||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||    
380 agccagaacagataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccagaattcgattggggt 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 180764 - 180400
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||||| |||||||| || || || |||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||| || || ||||||||    
180764 tagattattctgtccgaaagaagttggacactcaatatcttagggatatggcacaattggcaaatagagtccgacaagttgaaaggcttaaagctgaaaa 180665  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || || |||||||| ||||||||||| ||||||||||||||  | |||||||| || |||||   | |||||||||||||||| ||| |||| ||||||    
180664 ggccaggacaaatagattccctaagaaggagaaagttgcttacgtagatactggtgacagtgacgcataattcgattggggttccgatactgtcgaagat 180565  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||||||||||||||||||||||| ||| || || ||||| || ||||||||||||||||| |||||    |||||| | || ||||| |    
180564 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgcaagttattaaggccatcaaatggaaaaaacccagaagaaccaaagaatgaca 180465  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||| || ||||| || ||||| ||||| |||||||| ||||| || ||||||||| |||||    
180464 aatatcctcctaaaacatacactttcgatgtttctaaatgcgaagagatctttgatcttctagtt 180400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 6 - 304
Target Start/End: Original strand, 13203 - 13501
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||||  || || |||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||    
13203 tagactattctgttcagaaaaagttagatacacaacatcttagggatatggcacaattggcagatagagtccgccaagttgaaaggcttaaggctgaaaa 13302  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    ||| || ||||||||||||||||||||||| || ||||||||||||||  |||| |||||||| | | |||| |||||||| || ||  | || || |||    
13303 agccaggacaaataggttccctaagaaagaaaaggttgcttatatcgacgctggagatagtgatccagaatttgattggggatccgaggcggttgatgat 13402  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 304  Q
    | | ||||||||||||| ||||| ||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||||| |||||| |||||||||||    
13403 aacaaaataaatctcgccgaattgaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatgtagaagaacccaaaaatgat 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 8620 - 8813
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||| | || ||||||||    
8620 tagattattctattcgaaagaaattagatacacaatatcttagggacatggcgcagttagcagatagggttcgccaagtcgagagagttaatgctgaaaa 8719  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgta 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||| || |||| ||||    
8720 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccggaattcgattggggatcagattttgta 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 125; Significance: 3e-64; HSPs: 6)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 146525 - 146889
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| || |||||||| || ||||| ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || |||||||||||    
146525 tagattattcggtccgaaagaagttggatacccaataccttagggatatggcataattggcagatagagtccgacaagttgaaaggcttaaggctgaaaa 146624  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || || |||||||| |||||||||||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||| ||| || | ||||||    
146625 ggccaggacaaatagattccctaagaaagagaaagttgcttacattgatactggagacaatgacccataatttgattggggttccgatactctcgaagat 146724  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||||||||||||||||||||||| ||| || || ||  | ||  |||||||||||||||| || ||    |||||| | || ||||| |    
146725 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgttagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgaca 146824  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||| || ||||| || ||||||||||| |||||||| ||||| || ||||||||| |||||    
146825 aatatcctcctaaaacatacacttttgatgtttctaaatgcgaagagatctttgatcttctagtt 146889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 82514 - 82878
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| ||  ||||||| || ||||| ||||| |||||||| ||||| ||||| |||| ||||||||| ||||||||||| || |||||||||||    
82514 tagattattcggtctgaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaa 82613  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || || |||||||| ||||||| |||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||  ||| || |  |||||    
82614 ggccaggacaaatagattccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagat 82713  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||||||||||||||||||||||| ||| || || || || ||  |||||||||||||||| || ||    |||||| | || ||||| |    
82714 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgaca 82813  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||| || ||||| || || || ||||| |||||||| ||||| || ||| ||||| |||||    
82814 aatatcctcctaaaacatacaccttagatgtttctaaatgcgaagagatctttcatcttctagtt 82878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 120186 - 120550
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| ||  ||||||| || ||||| ||||| |||||||| ||||| ||||| |||| ||||||||| ||||||||||| || |||||||||||    
120186 tagattattcggtctgaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaa 120285  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
     || || |||||||| ||||||| |||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||  ||| || |  |||||    
120286 ggccaggacaaatagattccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagat 120385  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    | ||| |||||||||||||||||||||||||||| ||| || || || || ||  |||||||||||||||| || ||    |||||| | || ||||| |    
120386 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgaca 120485  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||||| || ||||| || || || ||||| |||||||| ||||| || ||| ||||| |||||    
120486 aatatcctcctaaaacatacaccttagatgtttctaaatgcgaagagatctttcatcttctagtt 120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 126 - 370
Target Start/End: Original strand, 147685 - 147929
Alignment:
126 ctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcaga 225  Q
    |||||||||||||||||||||| || |||||||| || ||||| | | ||||||||| |||||| ||| || | ||||||| ||| ||||||||||||||    
147685 ctaagaaagagaaagttgcttacattgatactggagacagtgacccagaattcgattagggttccgatactctcgaagataacgagataaatctcgcaga 147784  T
226 attaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttat 325  Q
    |||||||||||||| ||| || || || || ||  |||||||||||||||| |||||    |||||| | || ||||| |||||||| || ||||| ||     
147785 attaaaagatgggccaccatatacctgaaagttaataaggccatcaaatggaaaaaacccagaagaaccaaagaatgacaaatatcctcctaaaacatac 147884  T
326 acttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    ||||| ||||| |||||||| ||||| || ||||||||| |||||    
147885 actttcgatgtttctaaatgcgaagagatctttgatcttctagtt 147929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 133280 - 133404
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| || |||||||| || ||||  ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || |||||||||||    
133280 tagattattcggtccgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaaa 133379  T
106 agctagaacaaataggttccctaag 130  Q
     || || |||||||| |||||||||    
133380 ggccaggacaaatagattccctaag 133404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 137809 - 137933
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||| || |||||||| || ||||  ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || |||||||||||    
137809 tagattattcggtccgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaaa 137908  T
106 agctagaacaaataggttccctaag 130  Q
     || || |||||||| |||||||||    
137909 ggccaggacaaatagattccctaag 137933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 6 - 369
Target Start/End: Complemental strand, 69128 - 68765
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||||||||||||||||||||| || || || |||||||||||||| ||||| ||| | ||||| |||||||| ||||| ||||| || | |||||| ||    
69128 tagattattctgttcgaaagaagttggacactcaatatcttagggatatggcacaagtggcagacagagtccgacaagtcgaaaggcttatggctgagaa 69029  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    |||  | |||||||| ||||||||||| || |||||||| ||  | ||||| || || | ||| | | ||||||||||||| || ||| |||| ||||||    
69028 agcccggacaaatagattccctaagaaggaaaaagttgcctacgtggataccggagacaatgacccataattcgattgggggtcagatactgtcgaagat 68929  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |  ||||||||||||||||| ||||||||||||| |||||| |  |||||||| ||||||||||||||||| |||||    |||||| | |||||||| |    
68928 aatgaaataaatctcgcagagttaaaagatgggccaccttataactgcaaattattaaggccatcaaatggaaaaaaccctgaagaacctaaaaatgaca 68829  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 369  Q
    ||||| | || ||||| |||||||| ||||| |||||||||||||| || || |||||||||||    
68828 aatattctcctaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatcttttagt 68765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 370
Target Start/End: Complemental strand, 43717 - 43376
Alignment:
29 ttagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaataggttcccta 128  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||| | |||||  |||| || ||||| |||||||| || ||||||||||| |||     
43717 ttagatacacaatatcttagggatatggtacaattagcagatagagtctggcaagtcaaaagccttaaggccgaaaaagccaggacaaataggtttcctt 43618  T
129 agaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaatt 228  Q
    ||||||| || ||||||||||||| |||||| || || || | | ||||||||||||| |||||| |||| || |||| ||| |||||||| |||||||     
43617 agaaagaaaaggttgcttatatcgttactggagacagcgacccagaattcgattggggatctgatactgtcgatgataacgagataaatcttgcagaatc 43518  T
229 aaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatact 328  Q
    |||||||||||  || || ||||| || ||  |||||||||||||||| || |||   |||||| | || |||||||||||||| |||||||| || |||    
43517 aaaagatgggccgccctatacttgtaagttactaaggccatcaaatggaaagaatcctgaagaagcaaagaatgataaatatcctccaaaaacatacact 43418  T
329 tttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    |||||| | |||||||| ||||| || ||||||||| |||||    
43417 tttgatttatctaaatgcgaagagatttttgatcttctagtt 43376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 6 - 351
Target Start/End: Complemental strand, 135044 - 134699
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    |||| ||||||||| ||||||| || || || |||||||||||||| || ||||| || ||||| |||| ||| ||||| ||||| || |||||||| ||    
135044 tagactattctgtttgaaagaagttggacactcaatatcttagggatatagcgcagttggcagacagagcccgacaagtcgaaaggcttaaggctgagaa 134945  T
106 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 205  Q
    |||    |||||||||||||||||||| ||||||||| | ||  | ||||||||  | ||||| | | ||||||||||||| || ||| |||| ||||||    
134944 agcccagacaaataggttccctaagaaggagaaagtttcctaagtagatactggatacagtgacccagaattcgattggggatcagatactgttgaagat 134845  T
206 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 305  Q
    |  ||||||||||| ||||||||||||||||||| ||||||  | ||||||||  |||||||||| || || || |||   ||||||   |||||||| |    
134844 aatgaaataaatcttgcagaattaaaagatgggccaccttatgcctgcaaattactaaggccatcgaacggaaagaatcctgaagaacttaaaaatgaca 134745  T
306 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaaga 351  Q
    ||||||| || ||||| |||||||| ||||| ||||||||||||||    
134744 aatatcctcctaaaacatatactttcgatgtttctaaatgtgaaga 134699  T

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Target: scaffold0241 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 271 - 377
Target Start/End: Original strand, 10472 - 10578
Alignment:
271 aaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 370  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
10472 aaatggaaaaaatgtagaagagtccaaaaatgataaatatcccccaaaaacttatacttttgatgtatctaagtgtgaagaaatatttgatcttctagtt 10571  T
371 gatgatg 377  Q
    | |||||    
10572 gctgatg 10578  T

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Target: scaffold1714 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1714
Description:

Target: scaffold1714; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 1358 - 1445
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagact 93  Q
    |||| ||||||||||| || || ||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||    
1358 tagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcggatagaatccgccaagttgaaagact 1445  T

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Target: scaffold0757 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 1868 - 1954
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagac 92  Q
    |||| |||||| ||||||||||| ||||||| |||||||| || || ||||| |||||||| ||||||||||| |||||||||||||    
1868 tagactattctattcgaaagaaactagatacgcaatatctcagagatatggcacaattagctgatagagtccgacaagttgaaagac 1954  T

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Target: scaffold0401 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 1397 - 1483
Alignment:
22 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 108  Q
    |||||||||||||||||||||||| || || ||||| |||||||| ||||| ||||  ||||| |||||||| || |||||||||||    
1397 aaagaaattagatacacaatatctaagagatatggcacaattagctgatagggtccaacaagtcgaaagacttaaagctgaaaaagc 1483  T

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Target: scaffold0401; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 371
Target Start/End: Original strand, 1626 - 1746
Alignment:
251 tgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaag 350  Q
    |||||| | |||| |||||| ||||| ||||||   || ||| | ||||||||||||||| |  | ||||| ||||| ||||||||  | |||||||| |    
1626 tgcaaagtattaaagccatctaatggcaaaaatcatgaggaacctaaaaatgataaatatgcatctaaaacatatacatttgatgttaccaaatgtgatg 1725  T
351 aaatatttgatcttttagttg 371  Q
    |||| || |||||||||||||    
1726 aaatcttcgatcttttagttg 1746  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 45863 - 45761
Alignment:
6 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 105  Q
    ||||||||||| ||||||||||||||||||   | ||||| || || ||||| ||  ||||||||||||| |  ||||| |||||||| || ||||||||    
45863 tagattattctattcgaaagaaattagatatttagtatctaagagatatggcacatctagcagatagagttcaacaagtcgaaagacttaaagctgaaaa 45764  T
106 agc 108  Q
    |||    
45763 agc 45761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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