View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4579_high_4 (Length: 203)

Name: NF4579_high_4
Description: NF4579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4579_high_4
NF4579_high_4
[»] chr8 (32 HSPs)
chr8 (98-203)||(7412847-7412952)
chr8 (98-203)||(26288412-26288517)
chr8 (98-203)||(26301669-26301774)
chr8 (98-203)||(26313663-26313768)
chr8 (98-203)||(1261414-1261519)
chr8 (98-199)||(2627318-2627419)
chr8 (98-203)||(31042908-31043013)
chr8 (107-201)||(33037295-33037389)
chr8 (107-201)||(36979912-36980006)
chr8 (107-201)||(4759542-4759636)
chr8 (107-201)||(10683747-10683841)
chr8 (107-201)||(18870029-18870123)
chr8 (107-201)||(30656180-30656274)
chr8 (111-203)||(3439100-3439192)
chr8 (107-201)||(6311833-6311927)
chr8 (107-201)||(18852635-18852729)
chr8 (98-174)||(39784325-39784400)
chr8 (111-175)||(7289439-7289503)
chr8 (107-175)||(25327672-25327740)
chr8 (111-175)||(42575833-42575897)
chr8 (107-156)||(5701960-5702009)
chr8 (111-175)||(15290155-15290219)
chr8 (111-175)||(15470524-15470588)
chr8 (97-173)||(35745904-35745980)
chr8 (106-156)||(4456575-4456625)
chr8 (107-156)||(10688626-10688675)
chr8 (111-156)||(25689573-25689618)
chr8 (106-157)||(19175232-19175283)
chr8 (107-156)||(23799100-23799149)
chr8 (135-202)||(17982286-17982354)
chr8 (135-202)||(19948788-19948856)
chr8 (141-176)||(11383406-11383441)
[»] chr7 (44 HSPs)
chr7 (98-203)||(2479855-2479960)
chr7 (98-203)||(47264162-47264267)
chr7 (98-201)||(44847619-44847722)
chr7 (98-203)||(39730933-39731038)
chr7 (98-203)||(21646538-21646643)
chr7 (98-203)||(48408398-48408503)
chr7 (96-203)||(21983762-21983869)
chr7 (96-203)||(18409294-18409401)
chr7 (98-203)||(43504616-43504721)
chr7 (98-202)||(18414171-18414275)
chr7 (98-202)||(21989427-21989531)
chr7 (107-201)||(21640321-21640415)
chr7 (98-203)||(24789426-24789531)
chr7 (96-175)||(31109068-31109146)
chr7 (107-201)||(2058503-2058596)
chr7 (107-201)||(20357036-20357130)
chr7 (97-177)||(1532883-1532963)
chr7 (107-175)||(4873645-4873713)
chr7 (107-175)||(12406781-12406849)
chr7 (98-203)||(25767441-25767540)
chr7 (107-175)||(12397416-12397484)
chr7 (110-175)||(24023830-24023895)
chr7 (111-175)||(1562511-1562575)
chr7 (111-175)||(6592845-6592909)
chr7 (105-173)||(21811745-21811813)
chr7 (111-175)||(32060812-32060876)
chr7 (111-174)||(18392705-18392768)
chr7 (111-175)||(6595061-6595125)
chr7 (111-191)||(20343512-20343592)
chr7 (107-173)||(24260829-24260895)
chr7 (107-156)||(79955-80004)
chr7 (111-173)||(16880586-16880648)
chr7 (111-173)||(16885441-16885503)
chr7 (107-156)||(46515810-46515860)
chr7 (112-157)||(49092237-49092282)
chr7 (111-173)||(24265689-24265751)
chr7 (142-203)||(1532947-1533008)
chr7 (111-155)||(18390506-18390550)
chr7 (141-176)||(4509334-4509369)
chr7 (141-176)||(4511176-4511211)
chr7 (141-176)||(6431467-6431502)
chr7 (141-176)||(14070347-14070382)
chr7 (141-176)||(14380375-14380410)
chr7 (107-156)||(2647180-2647228)
[»] chr3 (72 HSPs)
chr3 (96-203)||(37408034-37408141)
chr3 (98-203)||(26928080-26928185)
chr3 (96-203)||(23198425-23198532)
chr3 (96-203)||(23200624-23200731)
chr3 (98-203)||(37726194-37726299)
chr3 (98-203)||(33386137-33386242)
chr3 (97-203)||(7782607-7782713)
chr3 (98-203)||(27453476-27453581)
chr3 (1-81)||(42770993-42771073)
chr3 (96-203)||(1306499-1306606)
chr3 (107-201)||(40372264-40372358)
chr3 (98-203)||(800685-800790)
chr3 (107-201)||(22172670-22172764)
chr3 (107-198)||(8477903-8477994)
chr3 (98-158)||(27974433-27974493)
chr3 (107-175)||(28501160-28501228)
chr3 (107-175)||(28503327-28503395)
chr3 (107-201)||(7167780-7167874)
chr3 (107-188)||(18656940-18657021)
chr3 (96-173)||(2676572-2676649)
chr3 (106-175)||(10055812-10055881)
chr3 (106-175)||(10058034-10058103)
chr3 (106-175)||(10060256-10060325)
chr3 (106-175)||(10062478-10062547)
chr3 (106-175)||(10064700-10064769)
chr3 (106-175)||(10066922-10066991)
chr3 (107-176)||(36029639-36029708)
chr3 (111-175)||(3617046-3617110)
chr3 (111-175)||(4599031-4599095)
chr3 (111-175)||(4601252-4601316)
chr3 (115-203)||(6716101-6716189)
chr3 (96-156)||(39032015-39032075)
chr3 (111-191)||(54634722-54634802)
chr3 (98-173)||(2672418-2672493)
chr3 (98-156)||(21711768-21711826)
chr3 (110-200)||(27352092-27352182)
chr3 (98-175)||(27038589-27038666)
chr3 (107-156)||(30709267-30709316)
chr3 (96-173)||(32475997-32476074)
chr3 (111-175)||(10208790-10208854)
chr3 (115-175)||(10210994-10211054)
chr3 (115-175)||(25637029-25637089)
chr3 (98-158)||(32143868-32143928)
chr3 (93-173)||(32480855-32480935)
chr3 (107-203)||(24694656-24694754)
chr3 (98-156)||(27027273-27027331)
chr3 (107-156)||(16264896-16264945)
chr3 (111-156)||(40734087-40734132)
chr3 (98-158)||(27985957-27986017)
chr3 (107-149)||(1730917-1730959)
chr3 (161-203)||(27974477-27974519)
chr3 (107-156)||(8738550-8738599)
chr3 (107-156)||(9090788-9090837)
chr3 (107-156)||(35926057-35926105)
chr3 (107-156)||(40592253-40592302)
chr3 (107-156)||(48438782-48438831)
chr3 (98-157)||(40845220-40845279)
chr3 (161-203)||(27986001-27986043)
chr3 (111-156)||(6718300-6718345)
chr3 (107-156)||(16498645-16498694)
chr3 (111-156)||(40735018-40735063)
chr3 (111-156)||(45282597-45282642)
chr3 (107-150)||(47923328-47923371)
chr3 (98-156)||(8127197-8127255)
chr3 (111-173)||(8512753-8512815)
chr3 (111-173)||(24968630-24968692)
chr3 (161-203)||(32143842-32143884)
chr3 (119-156)||(43404486-43404523)
chr3 (133-203)||(49200155-49200226)
chr3 (111-173)||(8517633-8517695)
chr3 (145-201)||(2671111-2671167)
chr3 (135-175)||(9634816-9634856)
[»] chr2 (31 HSPs)
chr2 (97-203)||(32289147-32289253)
chr2 (97-203)||(40739352-40739458)
chr2 (98-203)||(3492272-3492377)
chr2 (106-203)||(25410161-25410258)
chr2 (97-203)||(30832920-30833026)
chr2 (98-203)||(4484818-4484923)
chr2 (107-201)||(9295870-9295964)
chr2 (107-201)||(14292023-14292117)
chr2 (98-203)||(6266274-6266379)
chr2 (107-175)||(39811485-39811553)
chr2 (107-175)||(44310479-44310547)
chr2 (107-201)||(11098395-11098489)
chr2 (107-175)||(32247276-32247344)
chr2 (98-158)||(28258669-28258729)
chr2 (111-175)||(12647891-12647955)
chr2 (100-158)||(36757419-36757477)
chr2 (107-156)||(8389632-8389681)
chr2 (107-156)||(10706734-10706783)
chr2 (96-173)||(19344935-19345012)
chr2 (107-156)||(21630511-21630560)
chr2 (107-156)||(33528106-33528155)
chr2 (107-156)||(39483443-39483492)
chr2 (107-150)||(20522794-20522837)
chr2 (161-203)||(28258713-28258755)
chr2 (107-156)||(23077953-23078002)
chr2 (98-173)||(19349793-19349868)
chr2 (98-152)||(33118696-33118750)
chr2 (107-156)||(13569896-13569945)
chr2 (135-201)||(36206132-36206199)
chr2 (122-176)||(17865724-17865778)
chr2 (133-177)||(29867491-29867535)
[»] chr5 (48 HSPs)
chr5 (98-203)||(9352807-9352912)
chr5 (92-203)||(36931837-36931948)
chr5 (98-203)||(16407641-16407746)
chr5 (96-203)||(26177464-26177571)
chr5 (98-203)||(15465020-15465125)
chr5 (96-199)||(16409075-16409178)
chr5 (97-203)||(9789704-9789810)
chr5 (97-203)||(18442128-18442234)
chr5 (106-203)||(26170365-26170462)
chr5 (98-203)||(24136379-24136484)
chr5 (97-203)||(29752285-29752391)
chr5 (107-201)||(30631846-30631940)
chr5 (98-203)||(29719965-29720070)
chr5 (107-175)||(1456646-1456714)
chr5 (107-175)||(27450333-27450401)
chr5 (107-201)||(15045178-15045271)
chr5 (107-175)||(27445490-27445558)
chr5 (107-175)||(29402558-29402626)
chr5 (107-175)||(43599242-43599310)
chr5 (107-175)||(43604734-43604802)
chr5 (107-175)||(43610226-43610294)
chr5 (96-175)||(29722150-29722229)
chr5 (111-203)||(22536748-22536840)
chr5 (98-156)||(14520796-14520854)
chr5 (97-203)||(29751619-29751725)
chr5 (111-174)||(10592856-10592919)
chr5 (111-174)||(16544006-16544069)
chr5 (111-174)||(16546228-16546291)
chr5 (96-173)||(33768697-33768774)
chr5 (96-173)||(33791829-33791906)
chr5 (104-173)||(37556130-37556199)
chr5 (106-174)||(25077713-25077781)
chr5 (106-174)||(25135682-25135750)
chr5 (98-173)||(2785888-2785963)
chr5 (98-173)||(31396489-31396564)
chr5 (111-174)||(40379690-40379753)
chr5 (107-156)||(31180773-31180822)
chr5 (96-173)||(31401344-31401421)
chr5 (104-173)||(37560952-37561021)
chr5 (107-156)||(43592797-43592846)
chr5 (111-174)||(40381901-40381964)
chr5 (106-156)||(11916452-11916502)
chr5 (107-173)||(28807084-28807150)
chr5 (107-156)||(12083659-12083708)
chr5 (98-148)||(35388196-35388246)
chr5 (107-142)||(43625605-43625640)
chr5 (135-177)||(25412396-25412438)
chr5 (104-157)||(31004650-31004704)
[»] scaffold0491 (2 HSPs)
scaffold0491 (96-203)||(9203-9310)
scaffold0491 (98-203)||(11648-11753)
[»] chr1 (28 HSPs)
chr1 (96-203)||(24202249-24202356)
chr1 (96-203)||(19360910-19361017)
chr1 (98-203)||(19365768-19365873)
chr1 (98-203)||(51764990-51765095)
chr1 (96-200)||(13604093-13604197)
chr1 (97-203)||(20622716-20622822)
chr1 (98-199)||(26644373-26644474)
chr1 (106-201)||(41391084-41391178)
chr1 (96-174)||(44023375-44023452)
chr1 (98-175)||(39446006-39446082)
chr1 (98-203)||(40281958-40282063)
chr1 (98-200)||(9986785-9986887)
chr1 (98-176)||(21536112-21536190)
chr1 (111-203)||(9036015-9036107)
chr1 (97-174)||(1054513-1054589)
chr1 (111-175)||(21053552-21053616)
chr1 (111-174)||(44203230-44203293)
chr1 (98-156)||(3282273-3282331)
chr1 (98-156)||(37070334-37070392)
chr1 (107-156)||(13598967-13599016)
chr1 (107-175)||(25439407-25439475)
chr1 (107-175)||(25444600-25444668)
chr1 (107-156)||(24793674-24793723)
chr1 (106-156)||(41398764-41398814)
chr1 (98-173)||(43987948-43988023)
chr1 (107-156)||(13659840-13659889)
chr1 (115-156)||(16124197-16124238)
chr1 (119-156)||(29652381-29652418)
[»] scaffold0188 (1 HSPs)
scaffold0188 (98-203)||(17431-17536)
[»] chr4 (39 HSPs)
chr4 (98-203)||(28467977-28468082)
chr4 (97-203)||(13992774-13992880)
chr4 (98-203)||(31495797-31495902)
chr4 (98-203)||(5148197-5148302)
chr4 (107-201)||(24742475-24742569)
chr4 (98-203)||(31985127-31985232)
chr4 (107-175)||(3814529-3814597)
chr4 (107-175)||(9223907-9223975)
chr4 (107-175)||(9228694-9228762)
chr4 (107-175)||(51520974-51521042)
chr4 (107-175)||(56141519-56141587)
chr4 (96-174)||(18856234-18856311)
chr4 (98-174)||(18860446-18860521)
chr4 (96-158)||(5143807-5143869)
chr4 (107-188)||(5733158-5733239)
chr4 (100-159)||(8689038-8689097)
chr4 (107-174)||(45347325-45347392)
chr4 (106-175)||(7122274-7122343)
chr4 (106-175)||(7124496-7124565)
chr4 (111-175)||(8392994-8393058)
chr4 (111-175)||(8395203-8395267)
chr4 (96-203)||(6742886-6742993)
chr4 (107-156)||(16628354-16628403)
chr4 (107-156)||(38151919-38151968)
chr4 (107-155)||(3778116-3778164)
chr4 (111-175)||(5135661-5135725)
chr4 (111-175)||(5137887-5137951)
chr4 (107-157)||(5268700-5268750)
chr4 (107-156)||(10047932-10047981)
chr4 (107-156)||(16622775-16622824)
chr4 (110-156)||(29761182-29761228)
chr4 (107-156)||(54867745-54867794)
chr4 (98-156)||(5396164-5396221)
chr4 (107-156)||(9194164-9194214)
chr4 (110-156)||(36314715-36314761)
chr4 (110-156)||(36328924-36328970)
chr4 (138-175)||(18712294-18712331)
chr4 (161-202)||(5143782-5143823)
chr4 (120-156)||(25861527-25861563)
[»] scaffold0510 (1 HSPs)
scaffold0510 (97-203)||(1082-1188)
[»] chr6 (46 HSPs)
chr6 (97-203)||(23896852-23896958)
chr6 (98-203)||(5674229-5674334)
chr6 (98-203)||(6097881-6097986)
chr6 (98-203)||(22709540-22709645)
chr6 (98-203)||(2171999-2172104)
chr6 (107-201)||(30125026-30125120)
chr6 (98-203)||(3073238-3073343)
chr6 (98-203)||(5756951-5757056)
chr6 (107-175)||(11857491-11857559)
chr6 (107-175)||(14741934-14742002)
chr6 (107-175)||(22010197-22010265)
chr6 (98-203)||(26253589-26253694)
chr6 (106-203)||(27647475-27647572)
chr6 (111-203)||(16578997-16579089)
chr6 (111-203)||(16616291-16616383)
chr6 (98-203)||(411685-411790)
chr6 (106-175)||(34166673-34166742)
chr6 (111-175)||(6136471-6136535)
chr6 (98-174)||(6439008-6439083)
chr6 (107-173)||(5343990-5344056)
chr6 (106-175)||(13150856-13150925)
chr6 (96-173)||(33329930-33330007)
chr6 (111-191)||(16554466-16554546)
chr6 (111-191)||(16631022-16631102)
chr6 (97-173)||(16839256-16839332)
chr6 (107-156)||(5016977-5017026)
chr6 (107-156)||(5266596-5266645)
chr6 (107-156)||(14737093-14737142)
chr6 (96-156)||(24714938-24714999)
chr6 (107-156)||(31085954-31086003)
chr6 (96-173)||(33335427-33335504)
chr6 (106-175)||(34151835-34151904)
chr6 (106-175)||(34164451-34164520)
chr6 (111-175)||(6026846-6026910)
chr6 (111-175)||(25420809-25420873)
chr6 (111-175)||(33342612-33342676)
chr6 (98-173)||(6005932-6006007)
chr6 (107-203)||(10076673-10076769)
chr6 (107-154)||(28155098-28155145)
chr6 (107-156)||(18234650-18234699)
chr6 (104-156)||(5571754-5571806)
chr6 (119-156)||(603772-603809)
chr6 (111-156)||(16652728-16652773)
chr6 (107-151)||(21272470-21272514)
chr6 (98-145)||(31980094-31980141)
chr6 (135-176)||(5413941-5413982)
[»] scaffold0140 (1 HSPs)
scaffold0140 (98-203)||(7911-8016)
[»] scaffold0087 (3 HSPs)
scaffold0087 (98-203)||(43434-43539)
scaffold0087 (98-158)||(36324-36384)
scaffold0087 (169-203)||(36376-36410)
[»] scaffold0006 (4 HSPs)
scaffold0006 (96-200)||(132750-132854)
scaffold0006 (107-156)||(6252-6301)
scaffold0006 (107-156)||(3060-3109)
scaffold0006 (107-156)||(149601-149650)
[»] scaffold1455 (1 HSPs)
scaffold1455 (98-174)||(1709-1784)
[»] scaffold0464 (1 HSPs)
scaffold0464 (98-174)||(870-945)
[»] scaffold0135 (1 HSPs)
scaffold0135 (107-175)||(34562-34630)
[»] scaffold0286 (1 HSPs)
scaffold0286 (98-201)||(21939-22042)
[»] scaffold0355 (1 HSPs)
scaffold0355 (107-175)||(3345-3413)
[»] scaffold1519 (1 HSPs)
scaffold1519 (135-203)||(519-587)
[»] scaffold0565 (1 HSPs)
scaffold0565 (111-175)||(3109-3173)
[»] scaffold0098 (2 HSPs)
scaffold0098 (98-158)||(45744-45804)
scaffold0098 (161-203)||(45718-45760)
[»] scaffold0674 (1 HSPs)
scaffold0674 (111-176)||(4233-4298)
[»] scaffold0665 (1 HSPs)
scaffold0665 (107-156)||(8216-8265)
[»] scaffold0197 (2 HSPs)
scaffold0197 (96-173)||(18661-18738)
scaffold0197 (111-173)||(13796-13858)
[»] scaffold0137 (1 HSPs)
scaffold0137 (111-174)||(5871-5934)
[»] scaffold0259 (1 HSPs)
scaffold0259 (111-173)||(1751-1813)
[»] scaffold0036 (1 HSPs)
scaffold0036 (107-156)||(86153-86203)
[»] scaffold0028 (1 HSPs)
scaffold0028 (111-173)||(148456-148518)
[»] scaffold0009 (1 HSPs)
scaffold0009 (111-173)||(176462-176524)
[»] scaffold0466 (1 HSPs)
scaffold0466 (141-176)||(6750-6785)


Alignment Details
Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 7412952 - 7412847
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7412952 tgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttg 7412853  T
Q  198 cagggt 203  Q
    ||||||    
T  7412852 cagggt 7412847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 26288517 - 26288412
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26288418  T
Q  198 cagggt 203  Q
    ||||||    
T  26288417 cagggt 26288412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 26301774 - 26301669
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26301675  T
Q  198 cagggt 203  Q
    ||||||    
T  26301674 cagggt 26301669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 26313768 - 26313663
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26313669  T
Q  198 cagggt 203  Q
    ||||||    
T  26313668 cagggt 26313663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 1261414 - 1261519
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| || |||||||||||| |||||    
T  1261414 tgttgatatttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttg 1261513  T
Q  198 cagggt 203  Q
    ||||||    
T  1261514 cagggt 1261519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 2627318 - 2627419
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtttg 2627417  T
Q  198 ca 199  Q
    ||    
T  2627418 ca 2627419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 31042908 - 31043013
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  198 cagggt 203  Q
    ||||||    
T  31043008 cagggt 31043013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 33037295 - 33037389
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||    
T  33037295 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 33037389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 36980006 - 36979912
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||    
T  36980006 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 36979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 4759542 - 4759636
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |   ||||||||||| |||||||||    
T  4759542 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 4759636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 10683747 - 10683841
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||||||||    
T  10683747 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 10683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 18870029 - 18870123
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||||||| |||||||||    
T  18870029 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgcagg 18870123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 30656274 - 30656180
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||||||||    
T  30656274 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 30656180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 3439100 - 3439192
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |   ||||||||||| | |||||||||    
T  3439100 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 3439192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 6311927 - 6311833
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||     ||||||||||| |||||||||    
T  6311927 ttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 6311833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 18852635 - 18852729
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     ||||||||||| |||||||||    
T  18852635 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 18852729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 39784325 - 39784400
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39784325 tgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 39784400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 7289439 - 7289503
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7289439 cttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgattt 7289503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 25327672 - 25327740
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  25327672 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgattt 25327740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 42575897 - 42575833
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  42575897 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgattt 42575833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 5701960 - 5702009
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5701960 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 15290155 - 15290219
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||    
T  15290155 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgattt 15290219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 15470524 - 15470588
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||    
T  15470524 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgattt 15470588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 35745980 - 35745904
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  35745980 atgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 35745904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 4456625 - 4456575
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4456625 tttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 10688626 - 10688675
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10688626 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 25689573 - 25689618
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  25689573 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 19175232 - 19175283
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  19175232 tttggcttcaaatttgcggtttggaagaacagaaaaatcgtgtcacgatttt 19175283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 23799100 - 23799149
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  23799100 ttggtttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 17982286 - 17982354
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgatttt-gtaatgccgtgagctggtttgcaggg 202  Q
    |||||||||||||||| ||||| |  |||||||||||||||| |||||| || |||||||||| |||||    
T  17982286 cagagaaatcgtgacatgatttggcaatcgtgacacgattttggtaatgtcgagagctggttttcaggg 17982354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 19948856 - 19948788
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgattttg-taatgccgtgagctggtttgcaggg 202  Q
    ||||||||||||||||||||||    ||||||||||||||||| ||||| || |||||||||| |||||    
T  19948856 cagagaaatcgtgacacgatttgacaatcgtgacacgattttgataatgtcgagagctggttttcaggg 19948788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 11383406 - 11383441
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    |||||||||||||||||||||||||| |||||||||    
T  11383406 aatcgtgacacgattttggcatcgtggcacgatttt 11383441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 4e-46; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 2479960 - 2479855
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2479960 tgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttg 2479861  T
Q  198 cagggt 203  Q
    ||||||    
T  2479860 cagggt 2479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 47264267 - 47264162
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47264267 tgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttg 47264168  T
Q  198 cagggt 203  Q
     |||||    
T  47264167 tagggt 47264162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 44847619 - 44847722
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44847619 tgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttg 44847718  T
Q  198 cagg 201  Q
    ||||    
T  44847719 cagg 44847722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 39730933 - 39731038
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 39731032  T
Q  198 cagggt 203  Q
    ||||||    
T  39731033 cagggt 39731038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 21646643 - 21646538
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||    
T  21646643 tgttgacatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 21646544  T
Q  198 cagggt 203  Q
    ||||||    
T  21646543 cagggt 21646538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 48408398 - 48408503
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 48408497  T
Q  198 cagggt 203  Q
    ||||||    
T  48408498 cagggt 48408503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 21983869 - 21983762
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||| ||||||||||||    
T  21983869 aatgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtt 21983770  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  21983769 tgcagggt 21983762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 18409401 - 18409294
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||    
T  18409401 aatgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtt 18409302  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  18409301 tgcagggt 18409294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 43504721 - 43504616
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  43504721 tgttgagatttagcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 43504622  T
Q  198 cagggt 203  Q
    ||||||    
T  43504621 cagggt 43504616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 18414275 - 18414171
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||  |||||||||||||||||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  198 caggg 202  Q
    |||||    
T  18414175 caggg 18414171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 21989531 - 21989427
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||| |||| ||||||||||||||    
T  21989531 tgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttg 21989432  T
Q  198 caggg 202  Q
    |||||    
T  21989431 caggg 21989427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 21640415 - 21640321
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||    
T  21640415 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 21640321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 24789426 - 24789531
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| |||||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtttg 24789525  T
Q  198 cagggt 203  Q
    ||||||    
T  24789526 cagggt 24789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 31109068 - 31109146
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31109068 aatgttgaaatt-ggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgattt 31109146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 2058596 - 2058503
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| |||||||||    
T  2058596 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacga-tttgaggtgccgtgagctagtttgcagg 2058503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 20357036 - 20357130
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||||||||    
T  20357036 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 20357130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 1532883 - 1532963
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttg 177  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  1532883 atgttgatatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgaatttg 1532963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 4873713 - 4873645
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873713 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 4873645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 12406849 - 12406781
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406849 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 12406781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 25767540 - 25767441
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| |||||      |||||||||||||| | ||||||||||||||||||||| || ||||||||||||||||||    
T  25767540 tgttgatatttggcttcaaatttgtggtctggaa------agaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 25767447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 12397484 - 12397416
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  12397484 ttggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgattt 12397416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 24023830 - 24023895
Alignment:
Q  110 gcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  24023830 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgattt 24023895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 1562575 - 1562511
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  1562575 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 1562511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 6592909 - 6592845
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  6592909 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 6592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 21811745 - 21811813
Alignment:
Q  105 atttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  21811745 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgat 21811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 32060876 - 32060812
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32060876 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 32060812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 18392768 - 18392705
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  18392768 cttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 18392705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 6595125 - 6595061
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  6595125 cttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgattt 6595061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 20343512 - 20343592
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagct 191  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||||| |   |||||||||||    
T  20343512 cttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagct 20343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 24260829 - 24260895
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||||    
T  24260829 ttggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 80004 - 79955
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  80004 ttggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 16880648 - 16880586
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  16880648 cttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat 16880586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 16885503 - 16885441
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  16885503 cttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgat 16885441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 46515810 - 46515860
Alignment:
Q  107 ttggcttcaaatttgtggttt-ggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  46515810 ttggcttcaaatttatggttttggaagaacagagaaatcgtgacacgattt 46515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  112 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 157  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 24265689 - 24265751
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||| ||||||||| ||||||| ||||||||||   ||||||||||||    
T  24265689 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat 24265751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 1532947 - 1533008
Alignment:
Q  142 atcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||| ||||||||||||||| |||||||   |||| |||||| |||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggt 1533008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 18390550 - 18390506
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 155  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||    
T  18390550 cttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 4509369 - 4509334
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4509369 aatcgtgacacgattttgggatcgtgacacgatttt 4509334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 4511211 - 4511176
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4511211 aatcgtgacacgattttgggatcgtgacacgatttt 4511176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 6431467 - 6431502
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6431467 aatcgtgacacgattttgggatcgtgacacgatttt 6431502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 14070382 - 14070347
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    |||||||||||||||||||||||||| |||||||||    
T  14070382 aatcgtgacacgattttggcatcgtggcacgatttt 14070347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 14380410 - 14380375
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    |||||||||||||||||||||||||| |||||||||    
T  14380410 aatcgtgacacgattttggcatcgtggcacgatttt 14380375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 2647180 - 2647228
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||| |||||| || ||||||||||||||| |||||||||    
T  2647180 ttggcttcaaatttatggttttga-gaacagagaaatcgtaacacgattt 2647228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 7e-45; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 37408034 - 37408141
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  37408034 aatgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtt 37408133  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  37408134 tgcagggt 37408141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 26928080 - 26928185
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 26928179  T
Q  198 cagggt 203  Q
    ||||||    
T  26928180 cagggt 26928185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 23198532 - 23198425
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  23198532 aatgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtt 23198433  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  23198432 tgcagggt 23198425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 23200731 - 23200624
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  23200731 aatgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtt 23200632  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  23200631 tgcagggt 23200624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 37726299 - 37726194
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggtttg 37726200  T
Q  198 cagggt 203  Q
    ||||||    
T  37726199 cagggt 37726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 33386137 - 33386242
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 33386236  T
Q  198 cagggt 203  Q
    ||||||    
T  33386237 cagggt 33386242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 7782713 - 7782607
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||    
T  7782713 atgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggttt 7782614  T
Q  197 gcagggt 203  Q
    |||||||    
T  7782613 gcagggt 7782607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 27453581 - 27453476
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| || |||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  27453581 tgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 27453482  T
Q  198 cagggt 203  Q
     |||||    
T  27453481 tagggt 27453476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42770993 - 42771073
Alignment:
Q  1 ttcttcaactttttgttttcttggtgccatttctccaaaatactctctcactctatatttctccactagtttgctagttat 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42770993 ttcttcaactttgtgttttcttggtgccatttctccaaaatactctctcactctatatttctcaactagtttgctagttat 42771073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 1306606 - 1306499
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||  || ||||||||||||    
T  1306606 aatgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtt 1306507  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  1306506 tgcagggt 1306499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 40372264 - 40372358
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||    
T  40372264 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 40372358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 800685 - 800790
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| |||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  198 cagggt 203  Q
    | ||||    
T  800785 cggggt 800790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 22172670 - 22172764
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||  |||||||||    
T  22172670 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcagg 22172764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 8477994 - 8477903
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgc 198  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |   ||||||||||| ||||||    
T  8477994 ttggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 8477903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 27974433 - 27974493
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27974433 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 28501160 - 28501228
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28501160 ttggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 28501228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 28503327 - 28503395
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28503327 ttggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 28503395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 7167874 - 7167780
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||     ||||||||||| |||||||||    
T  7167874 ttggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgcagg 7167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 18657021 - 18656940
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtga 188  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||    
T  18657021 ttggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtga 18656940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 2676572 - 2676649
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  |||||||||||||    
T  2676572 aatgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10055812 - 10055881
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10055812 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10055881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10058034 - 10058103
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10058034 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10058103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10060256 - 10060325
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10060256 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10060325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10062478 - 10062547
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10062478 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10062547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10064700 - 10064769
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10064700 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10064769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 10066922 - 10066991
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10066922 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10066991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 36029708 - 36029639
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||| |||||||||    
T  36029708 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgatttt 36029639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 3617046 - 3617110
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3617046 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 3617110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 4599095 - 4599031
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  4599095 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgattt 4599031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 4601316 - 4601252
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  4601316 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgattt 4601252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 6716101 - 6716189
Alignment:
Q  115 aaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |   ||||||||||| | |||||||||    
T  6716101 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 6716189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 39032015 - 39032075
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39032015 aatgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 54634722 - 54634802
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagct 191  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |   |||||||||||    
T  54634722 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagct 54634802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 2672418 - 2672493
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  |||||||||||||    
T  2672418 tgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 21711826 - 21711768
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21711826 tgttgtaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 27352092 - 27352182
Alignment:
Q  110 gcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcag 200  Q
    |||| ||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||     ||||||||||| ||||||||    
T  27352092 gctttaaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcag 27352182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 27038666 - 27038589
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||   || |||||||||||||    
T  27038666 tgttgaaaattggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgatttcatcaacgtgacacgattt 27038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 30709267 - 30709316
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30709267 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 32476074 - 32475997
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||  ||||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||||    
T  32476074 aatgttgaagattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 10208790 - 10208854
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||    
T  10208790 cttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgattt 10208854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 10210994 - 10211054
Alignment:
Q  115 aaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  10210994 aaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 25637029 - 25637089
Alignment:
Q  115 aaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25637029 aaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgattt 25637089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 32143928 - 32143868
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 32480935 - 32480855
Alignment:
Q  93 tgtaatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||| |||||||  ||||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||||    
T  32480935 tgtactgttgaagattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 24694656 - 24694754
Alignment:
Q  107 ttggcttcaaatttgtggttt-ggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagc-tggtttgcagggt 203  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||   || |||| |||||||||| |||| ||||||| || ||||||||||    
T  24694656 ttggcttcaaatttgtggttttggaagaacagagaaatcgtgatacgatttcatcaacgtgtcacgattttgcaatgtcgtgagcatgttttgcagggt 24694754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 27027331 - 27027273
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  27027331 tgttgaaaatagacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 16264945 - 16264896
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16264945 ttggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 40734087 - 40734132
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40734087 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 27985957 - 27986017
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  27985957 tgttgagatttgatttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 1730917 - 1730959
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgac 149  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1730917 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 27974477 - 27974519
Alignment:
Q  161 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27974477 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 27974519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 8738550 - 8738599
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  8738550 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 9090788 - 9090837
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  9090788 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 35926105 - 35926057
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35926105 ttggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 40592253 - 40592302
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  40592253 ttggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 48438831 - 48438782
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  48438831 ttggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 40845279 - 40845220
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 157  Q
    |||||| ||||| |||||||||| || ||||| |||||||||||||||||||||||||||    
T  40845279 tgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 27986001 - 27986043
Alignment:
Q  161 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggt 27986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 6718300 - 6718345
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6718300 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 16498645 - 16498694
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  16498645 ttggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 40735018 - 40735063
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  40735018 cttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 45282597 - 45282642
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  45282597 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 47923328 - 47923371
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 150  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  47923328 ttggcttcaaatttgtggtttgaaaaaacagagaaatcgtgaca 47923371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 8127255 - 8127197
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||| ||| ||  || ||||||||||||||| |||||    
T  8127255 tgttgaaatttggcttcaaatttgtgattttgagaaatagagaaatcgtgacaagattt 8127197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 8512815 - 8512753
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||| ||||||||| ||||||| ||||||||||   ||||||||||||    
T  8512815 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat 8512753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 24968692 - 24968630
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| |||||||||||||||| || ||||||| |||||||| |  |||||||||||||    
T  24968692 cttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgat 24968630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 32143884 - 32143842
Alignment:
Q  161 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggt 32143842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 43404523 - 43404486
Alignment:
Q  119 ttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  43404523 ttgtgttttggaagaacagagaaatcgtgacacgattt 43404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 49200226 - 49200155
Alignment:
Q  133 aacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagc-tggtttgcagggt 203  Q
    |||||||||||||||||||||||||     |||| |||||||||| |||||||||||| || ||||||||||    
T  49200226 aacagagaaatcgtgacacgattttacaggcgtgtcacgattttgcaatgccgtgagcatgttttgcagggt 49200155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 8517695 - 8517633
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||| | ||||||||| ||||||| ||||||||||   ||||||||||||    
T  8517695 cttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat 8517633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 2671111 - 2671167
Alignment:
Q  145 gtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||||||||| |||||     ||||||||||| |||||||||    
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcagg 2671167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 9634856 - 9634816
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  9634856 cagagaaatcgtgacacgatttggcaatcgtgacacgattt 9634816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 32289147 - 32289253
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  32289147 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 32289246  T
Q  197 gcagggt 203  Q
    |||||||    
T  32289247 gcagggt 32289253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 40739458 - 40739352
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  40739458 atgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggttt 40739359  T
Q  197 gcagggt 203  Q
    |||||||    
T  40739358 gcagggt 40739352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 3492377 - 3492272
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 3492278  T
Q  198 cagggt 203  Q
    ||||||    
T  3492277 cagggt 3492272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 25410258 - 25410161
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  25410258 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttgcagggt 25410161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 30832920 - 30833026
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||| || |||||||||||||||||    
T  30832920 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggttt 30833019  T
Q  197 gcagggt 203  Q
    |||||||    
T  30833020 gcagggt 30833026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 4484923 - 4484818
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||| |||||    
T  4484923 tgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtttg 4484824  T
Q  198 cagggt 203  Q
    ||||||    
T  4484823 cagggt 4484818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 9295870 - 9295964
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||| |||||||||    
T  9295870 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 9295964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 14292117 - 14292023
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |   ||||||||||| |||||||||    
T  14292117 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgcagg 14292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 6266274 - 6266379
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| ||||||||||  ||||||||||||||| |||| ||||||||||| |||| || ||||||||||||||||||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  198 cagggt 203  Q
    ||||||    
T  6266374 cagggt 6266379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 39811485 - 39811553
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811485 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 39811553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 44310479 - 44310547
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310479 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 11098395 - 11098489
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||     ||||||||||| |||||||||    
T  11098395 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgcagg 11098489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 32247344 - 32247276
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32247344 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 28258669 - 28258729
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28258669 tgttgaaatttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 12647955 - 12647891
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  12647955 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 12647891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 36757419 - 36757477
Alignment:
Q  100 ttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36757419 ttgaaaattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 8389632 - 8389681
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8389632 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 10706734 - 10706783
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10706734 ttggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 19345012 - 19344935
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  ||||||| |||||    
T  19345012 aatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgatacgat 19344935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 21630560 - 21630511
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21630560 ttggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 33528106 - 33528155
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33528106 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 39483492 - 39483443
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39483492 ttggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 20522837 - 20522794
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20522837 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 28258713 - 28258755
Alignment:
Q  161 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 28258755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 23077953 - 23078002
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||    
T  23077953 ttggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 19349868 - 19349793
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||||| | | |||| |  |||||||||||||    
T  19349868 tgttgaaaattggtttcaaatttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgat 19349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 33118750 - 33118696
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacg 152  Q
    |||||||||||| ||||||||||||| ||||| |||| |||||||||||||||||    
T  33118750 tgttgaaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacg 33118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 13569945 - 13569896
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||| |||||    
T  13569945 ttggcttcaaatttgtggtttgaaagaacagaaaaatcatgacatgattt 13569896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 36206199 - 36206132
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgatttt-gtaatgccgtgagctggtttgcagg 201  Q
    |||||||||||||||| ||||| |  |||||||||||||||| |||||| || |||||||||| ||||    
T  36206199 cagagaaatcgtgacatgatttggcaatcgtgacacgattttggtaatgtcgagagctggttttcagg 36206132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 17865778 - 17865724
Alignment:
Q  122 tggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    ||||||||||||| ||||||||||||||| |||||   ||||||| |||||||||    
T  17865778 tggtttggaagaatagagaaatcgtgacatgatttcatcatcgtgtcacgatttt 17865724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 29867491 - 29867535
Alignment:
Q  133 aacagagaaatcgtgacacgattttggcatcgtgacacgattttg 177  Q
    |||||||||||||||||||||||| |  | |||||||||||||||    
T  29867491 aacagagaaatcgtgacacgatttggcaagcgtgacacgattttg 29867535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 9352807 - 9352912
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtttg 9352906  T
Q  198 cagggt 203  Q
    ||||||    
T  9352907 cagggt 9352912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 36931837 - 36931948
Alignment:
Q  92 atgtaatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagct 191  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||    
T  36931837 atgtaatgttgagatttcgcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagct 36931936  T
Q  192 ggtttgcagggt 203  Q
    ||||||||||||    
T  36931937 ggtttgcagggt 36931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 16407641 - 16407746
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  198 cagggt 203  Q
    ||||||    
T  16407741 cagggt 16407746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 26177464 - 26177571
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  26177464 aatgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtt 26177563  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  26177564 tgcagggt 26177571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 15465125 - 15465020
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  198 cagggt 203  Q
    ||||||    
T  15465025 cagggt 15465020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 16409075 - 16409178
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  16409075 aatgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtt 16409174  T
Q  196 tgca 199  Q
    ||||    
T  16409175 tgca 16409178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 9789810 - 9789704
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  9789810 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 9789711  T
Q  197 gcagggt 203  Q
    |||||||    
T  9789710 gcagggt 9789704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 18442234 - 18442128
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||    
T  18442234 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggttt 18442135  T
Q  197 gcagggt 203  Q
    |||||||    
T  18442134 gcagggt 18442128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 26170365 - 26170462
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  26170365 tttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggt 26170462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 24136484 - 24136379
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||| || |||||||||||| |||||    
T  24136484 tgttgatatttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttg 24136385  T
Q  198 cagggt 203  Q
    ||||||    
T  24136384 cagggt 24136379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 29752391 - 29752285
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| | ||    
T  29752391 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggtt 29752292  T
Q  197 gcagggt 203  Q
    |||||||    
T  29752291 gcagggt 29752285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 30631940 - 30631846
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||  |||||||||    
T  30631940 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcagg 30631846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 29719965 - 29720070
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| || ||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 29720064  T
Q  198 cagggt 203  Q
    ||||||    
T  29720065 cagggt 29720070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 1456646 - 1456714
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456646 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 1456714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 27450401 - 27450333
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450401 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 27450333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 15045271 - 15045178
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||  |||||||||||  |||||||||    
T  15045271 ttggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-tttgagatgccgtgagccagtttgcagg 15045178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 27445558 - 27445490
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  27445558 ttggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 27445490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 29402558 - 29402626
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29402558 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgattt 29402626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 43599310 - 43599242
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43599310 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgattt 43599242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 43604802 - 43604734
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43604802 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgattt 43604734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 43610294 - 43610226
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43610294 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgattt 43610226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 29722150 - 29722229
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  29722150 aatgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 29722229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 22536840 - 22536748
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |   ||||||||||| | |||||||||    
T  22536840 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 22536748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 14520854 - 14520796
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14520854 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 29751725 - 29751619
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||| || |||||||||  |||||||||| ||  ||||||||||| | ||    
T  29751725 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggtt 29751626  T
Q  197 gcagggt 203  Q
    |||||||    
T  29751625 gcagggt 29751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 10592856 - 10592919
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  10592856 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 10592919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 16544006 - 16544069
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  16544006 cttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 16544069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 16546228 - 16546291
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  16546228 cttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 16546291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 33768774 - 33768697
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  33768774 aatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33768697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 33791906 - 33791829
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  33791906 aatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 37556130 - 37556199
Alignment:
Q  104 aatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| |  |||||||||||||    
T  37556130 aatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgat 37556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 25077713 - 25077781
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  25077713 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgatt 25077781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 25135682 - 25135750
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  25135682 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgatt 25135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 2785963 - 2785888
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  2785963 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 2785888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 31396489 - 31396564
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||| |  |||||||||||||    
T  31396489 tgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 31396564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 40379690 - 40379753
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  40379690 cttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 40379753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 31180822 - 31180773
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31180822 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 31401344 - 31401421
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||| |||| |||| ||||||| |||||||| |  |||||||||||||    
T  31401344 aatgttgaaaattggcttcaaatttgtggtttgggagaatagaggaatcgtgtcacgatttggcaatcgtgacacgat 31401421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 37560952 - 37561021
Alignment:
Q  104 aatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    |||||||||||||    
T  37560952 aatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgat 37561021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 43592846 - 43592797
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43592846 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 40381901 - 40381964
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||| || |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  40381901 cttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 40381964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 11916452 - 11916502
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  11916452 tttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 28807084 - 28807150
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||||||| |||| ||||||||||||| ||||||| ||||||||||  |||||||||||||    
T  28807084 ttggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgat 28807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 12083659 - 12083708
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  12083659 ttggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtga 148  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 43625640 - 43625605
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaa 142  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43625640 ttggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 25412396 - 25412438
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgattttg 177  Q
    |||||||||||||||||||||| |  |||||||||||||||||    
T  25412396 cagagaaatcgtgacacgatttggcaatcgtgacacgattttg 25412438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 31004650 - 31004704
Alignment:
Q  104 aatttggcttcaaatttgtggtttggaagaacaga-gaaatcgtgacacgatttt 157  Q
    |||||| ||||||||||||| ||||| |||||||| ||||||||| |||||||||    
T  31004650 aatttgtcttcaaatttgtgttttgggagaacagatgaaatcgtgtcacgatttt 31004704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 9310 - 9203
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  9310 aatgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtt 9211  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  9210 tgcagggt 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 11753 - 11648
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 11654  T
Q  198 cagggt 203  Q
    ||||||    
T  11653 cagggt 11648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 24202249 - 24202356
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  24202249 aatgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtt 24202348  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  24202349 tgcagggt 24202356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 19360910 - 19361017
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  19360910 aatgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtt 19361009  T
Q  196 tgcagggt 203  Q
    ||||||||    
T  19361010 tgcagggt 19361017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 19365768 - 19365873
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 19365867  T
Q  198 cagggt 203  Q
    ||||||    
T  19365868 cagggt 19365873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 51764990 - 51765095
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| || ||||||||||||||||||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 51765089  T
Q  198 cagggt 203  Q
    ||||||    
T  51765090 cagggt 51765095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 13604093 - 13604197
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||| ||||||||||||    
T  13604093 aatgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtt 13604192  T
Q  196 tgcag 200  Q
    |||||    
T  13604193 tgcag 13604197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 20622822 - 20622716
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| || |    
T  20622822 atgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct 20622723  T
Q  197 gcagggt 203  Q
    |||||||    
T  20622722 gcagggt 20622716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 26644373 - 26644474
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||| ||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| | ||||||||||||    
T  26644373 tgttaaaaattggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattttgtaatgtcatgagctggtttg 26644472  T
Q  198 ca 199  Q
    ||    
T  26644473 ca 26644474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 41391178 - 41391084
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||  |||||||||||  |||||||||    
T  41391178 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-tttgagatgccgtgagccagtttgcagg 41391084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 44023375 - 44023452
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44023375 aatgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 44023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 39446082 - 39446006
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39446082 tgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 39446006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 40281958 - 40282063
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| | |||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  198 cagggt 203  Q
    ||||||    
T  40282058 cagggt 40282063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 9986785 - 9986887
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||| ||||||||| ||  |||||||||||||| ||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctg 9986884  T
Q  198 cag 200  Q
    |||    
T  9986885 cag 9986887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 21536112 - 21536190
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||    
T  21536112 tgttgtaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgacacgatttt 21536190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 9036015 - 9036107
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |   ||||||||||| | |||||||||    
T  9036015 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 9036107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 1054513 - 1054589
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  1054513 atgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgatt 1054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 21053552 - 21053616
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  21053552 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 21053616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 44203230 - 44203293
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  44203230 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgatt 44203293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 3282331 - 3282273
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3282331 tgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 37070392 - 37070334
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37070392 tgttgaaaattggtttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 13599016 - 13598967
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13599016 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 25439407 - 25439475
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |  |||||||||||||||    
T  25439407 ttggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25439475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 25444600 - 25444668
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |  |||||||||||||||    
T  25444600 ttggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25444668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 24793674 - 24793723
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24793674 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 41398814 - 41398764
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  41398814 tttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 43987948 - 43988023
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||| ||||||||||||||||||||||| ||| ||||| ||||||| | |||||| |  |||||||||||||    
T  43987948 tgttgaaaattggcttcaaatttgtggtttgggagagcagaggaatcgtgtcgcgatttggcaatcgtgacacgat 43988023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 13659889 - 13659840
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  13659889 ttggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  115 aaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 29652418 - 29652381
Alignment:
Q  119 ttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29652418 ttgtggtttggaagaacagagaaatcgtgatacgattt 29652381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 17431 - 17536
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 17530  T
Q  198 cagggt 203  Q
    ||||||    
T  17531 cagggt 17536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 28467977 - 28468082
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggtttg 28468076  T
Q  198 cagggt 203  Q
    ||||||    
T  28468077 cagggt 28468082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 13992880 - 13992774
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||    
T  13992880 atgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggttt 13992781  T
Q  197 gcagggt 203  Q
    |||||||    
T  13992780 gcagggt 13992774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 31495902 - 31495797
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  198 cagggt 203  Q
    ||||||    
T  31495802 cagggt 31495797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 5148302 - 5148197
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||| |||| |||||||| |||||    
T  5148302 tgttgaaaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttg 5148203  T
Q  198 cagggt 203  Q
    ||||||    
T  5148202 cagggt 5148197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 24742569 - 24742475
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||    
T  24742569 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 24742475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 31985127 - 31985232
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||| | || |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||| |    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagttag 31985226  T
Q  198 cagggt 203  Q
    ||||||    
T  31985227 cagggt 31985232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 3814597 - 3814529
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814597 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 3814529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 9223907 - 9223975
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9223907 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 9223975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 9228694 - 9228762
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228694 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 9228762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 51521042 - 51520974
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51521042 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 51520974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 56141519 - 56141587
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  56141519 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 56141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 18856311 - 18856234
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18856311 aatgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18856234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 18860521 - 18860446
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18860521 tgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 5143869 - 5143807
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5143869 aatgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 5733239 - 5733158
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtga 188  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||    
T  5733239 ttggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtga 5733158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 8689038 - 8689097
Alignment:
Q  100 ttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 159  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8689038 ttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 45347325 - 45347392
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  45347325 ttggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgatt 45347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 7122274 - 7122343
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7122274 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 7122343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 7124496 - 7124565
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7124496 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 7124565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 8392994 - 8393058
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  8392994 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 8393058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 8395203 - 8395267
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  8395203 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 8395267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 6742886 - 6742993
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||   || |||| |||||||||| || | || |||||| ||    
T  6742886 aatgttgtaaattggcttcaaatttatggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttgcaacgtcgagagctgttt 6742985  T
Q  196 tgcagggt 203  Q
    | ||||||    
T  6742986 ttcagggt 6742993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 16628354 - 16628403
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16628354 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 38151919 - 38151968
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38151919 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 3778164 - 3778116
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3778164 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 5135661 - 5135725
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  5135661 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 5135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 5137887 - 5137951
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  5137887 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 5137951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 5268700 - 5268750
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5268700 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 10047981 - 10047932
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10047981 ttggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 16622775 - 16622824
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16622775 ttggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 29761228 - 29761182
Alignment:
Q  110 gcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  29761228 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 54867794 - 54867745
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  54867794 ttggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 5396164 - 5396221
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5396164 tgttgaaaattagcttcaaatttgtggtttgaaagaacagagaaatcgtg-cacgattt 5396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 9194214 - 9194164
Alignment:
Q  107 ttggcttcaaatttgtggttt-ggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9194214 ttggcttcaaatttgtggttttggaagaacagagaaattgtgacacgattt 9194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 36314715 - 36314761
Alignment:
Q  110 gcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  36314715 gcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 36328924 - 36328970
Alignment:
Q  110 gcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  36328924 gcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 18712294 - 18712331
Alignment:
Q  138 agaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18712294 agaaatcgtgacacgattttggcatcgtgacacgattt 18712331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 5143823 - 5143782
Alignment:
Q  161 atcgtgacacgattttgtaatgccgtgagctggtttgcaggg 202  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  5143823 atcgtgacacgattttgcaatgtcgtgagctggtttgcaggg 5143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 25861527 - 25861563
Alignment:
Q  120 tgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  25861527 tgtgttttgggagaacagagaaatcgtgacacgattt 25861563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 1082 - 1188
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  1082 atgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggttt 1181  T
Q  197 gcagggt 203  Q
    |||||||    
T  1182 gcagggt 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 23896958 - 23896852
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggttt 196  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  23896958 atgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggttt 23896859  T
Q  197 gcagggt 203  Q
    |||||||    
T  23896858 gcagggt 23896852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 5674229 - 5674334
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||||    
T  5674229 tgttgatagttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 5674328  T
Q  198 cagggt 203  Q
    ||||||    
T  5674329 cagggt 5674334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 6097986 - 6097881
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 6097887  T
Q  198 cagggt 203  Q
    ||||||    
T  6097886 cagggt 6097881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 22709645 - 22709540
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||| ||||||||||||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggtttg 22709546  T
Q  198 cagggt 203  Q
    ||||||    
T  22709545 cagggt 22709540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 2172104 - 2171999
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||| || ||||||||||||||||||    
T  2172104 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 2172005  T
Q  198 cagggt 203  Q
    ||||||    
T  2172004 cagggt 2171999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 30125026 - 30125120
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||| |||||||||    
T  30125026 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 30125120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 3073343 - 3073238
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||| || ||||||||||||||| |     
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtcta 3073244  T
Q  198 cagggt 203  Q
    ||||||    
T  3073243 cagggt 3073238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 5756951 - 5757056
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||||||||||||| |||||| ||||||  ||||| |||||||| ||||||||||| |||||||||||||| ||||||||||| |||||| |||||||    
T  5756951 tgttgaaatttggctttaaatttatggtttaaaagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtttg 5757050  T
Q  198 cagggt 203  Q
    ||||||    
T  5757051 cagggt 5757056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 11857559 - 11857491
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857559 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 11857491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 14741934 - 14742002
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14741934 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 14742002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 22010197 - 22010265
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010197 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 22010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 26253589 - 26253694
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||||| || ||||||| | ||| |    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttag 26253688  T
Q  198 cagggt 203  Q
    ||||||    
T  26253689 cagggt 26253694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 27647475 - 27647572
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |   ||||||||||| | |||||||||    
T  27647475 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 27647572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 16579089 - 16578997
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |   ||||||||||| | |||||||||    
T  16579089 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 16578997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 16616291 - 16616383
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| |   ||||||||||| | |||||||||    
T  16616291 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggt 16616383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 411685 - 411790
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||| ||||||||||||||| |||||||| || ||||||||||||||| |||||||| ||||||| |||| ||  ||||||||||| || ||    
T  411685 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtctg 411784  T
Q  198 cagggt 203  Q
    ||||||    
T  411785 cagggt 411790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 34166673 - 34166742
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  34166673 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 34166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 6136535 - 6136471
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  6136535 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgattt 6136471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 6439083 - 6439008
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||| |||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  6439083 tgttgaaatt-ggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgatt 6439008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 5344056 - 5343990
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  5344056 ttggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 13150856 - 13150925
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  13150856 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 13150925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 33329930 - 33330007
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  33329930 aatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 33330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 16554466 - 16554546
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagct 191  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||| |   |||||||||||    
T  16554466 cttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagct 16554546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 16631022 - 16631102
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagct 191  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||| |   |||||||||||    
T  16631022 cttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagct 16631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 16839332 - 16839256
Alignment:
Q  97 atgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||||    
T  16839332 atgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 16839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 5016977 - 5017026
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5016977 ttggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 5266645 - 5266596
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5266645 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 14737093 - 14737142
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14737093 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 24714999 - 24714938
Alignment:
Q  96 aatgttgaaatttggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  24714999 aatgttgaaaattggcttcaaattttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 31085954 - 31086003
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31085954 ttggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 33335427 - 33335504
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||  | |||||| |  |||||||||||||    
T  33335427 aatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgat 33335504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 34151835 - 34151904
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||||||    
T  34151835 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgattt 34151904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 34164451 - 34164520
Alignment:
Q  106 tttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||||||    
T  34164451 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgattt 34164520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 6026846 - 6026910
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    |||||||||||||||||||||||| || |||||||||||||||||  ||||| ||||||||||||    
T  6026846 cttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgattt 6026910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 25420809 - 25420873
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||| | |||||||||||||    
T  25420809 cttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgattt 25420873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 33342676 - 33342612
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||| ||||||    
T  33342676 cttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgattt 33342612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 6006007 - 6005932
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||||| | |||||| |  |||||||||||||    
T  6006007 tgttgaaaattggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 6005932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 10076673 - 10076769
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||| ||||||||| |||| ||||||||| ||||||||||| |||||   || |||| |||||||||| |||| || |||||| ||||||||||    
T  10076673 ttggctttaaatttgtgttttgaaagaacagaaaaatcgtgacatgatttcatcagcgtgtcacgattttgcaatgtcgagagctgttttgcagggt 10076769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 28155098 - 28155145
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgat 154  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  28155098 ttggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 18234699 - 18234650
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  18234699 ttggctttaaatttgtggtttggaagaacagagaaatgttgacacgattt 18234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 5571754 - 5571806
Alignment:
Q  104 aatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||||||||||    
T  5571754 aatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 603809 - 603772
Alignment:
Q  119 ttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  603809 ttgtgttttggaagaacagagaaatcgtgacacgattt 603772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 16652728 - 16652773
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||    
T  16652728 cttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 21272470 - 21272514
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacac 151  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  21272470 ttggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 31980141 - 31980094
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcg 145  Q
    |||||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  31980141 tgttgatatttgtcttcaaatttgtgttttgggagaacagagaaatcg 31980094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 5413982 - 5413941
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  5413982 cagagaaatcgtgacacgatttggtaatcgtgacacgatttt 5413941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 7911 - 8016
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggtttg 8010  T
Q  198 cagggt 203  Q
    ||||||    
T  8011 cagggt 8016  T

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Target: scaffold0087 (Bit Score: 82; Significance: 6e-39; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 43434 - 43539
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||     
T  43434 tgttggaatttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggttta 43533  T
Q  198 cagggt 203  Q
    ||||||    
T  43534 cagggt 43539  T

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Target: scaffold0087; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 36324 - 36384
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  36324 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

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Target: scaffold0087; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 36376 - 36410
Alignment:
Q  169 acgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||||||| ||||||||||||||||||||    
T  36376 acgattttgtaatgtcgtgagctggtttgcagggt 36410  T

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Target: scaffold0006 (Bit Score: 77; Significance: 6e-36; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 132750 - 132854
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtt 195  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||| ||||||||||||    
T  132750 aatgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtt 132849  T
Q  196 tgcag 200  Q
    |||||    
T  132850 tgcag 132854  T

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Target: scaffold0006; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 6301 - 6252
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6301 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

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Target: scaffold0006; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 3109 - 3060
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3109 ttggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

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Target: scaffold0006; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 149650 - 149601
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  149650 ttggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

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Target: scaffold1455 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 1709 - 1784
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1709 tgttgaaatt-ggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

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Target: scaffold0464 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 945 - 870
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  945 tgttgaaatt-ggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 870  T

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Target: scaffold0135 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 34562 - 34630
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34562 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactattt 34630  T

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Target: scaffold0286 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 21939 - 22042
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttg 197  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||| |   ||||||||||| |||||    
T  21939 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttg 22038  T
Q  198 cagg 201  Q
    ||||    
T  22039 cagg 22042  T

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Target: scaffold0355 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 3345 - 3413
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  3345 ttggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgattt 3413  T

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Target: scaffold1519 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 519 - 587
Alignment:
Q  135 cagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||||||    
T  519 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggt 587  T

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Target: scaffold0565 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 3173 - 3109
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 175  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgattt 3109  T

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Target: scaffold0098 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 45804 - 45744
Alignment:
Q  98 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 158  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

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Target: scaffold0098; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 45760 - 45718
Alignment:
Q  161 atcgtgacacgattttgtaatgccgtgagctggtttgcagggt 203  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||    
T  45760 atcgtgacacaattttgtaatgtcgtgagctgatttgcagggt 45718  T

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Target: scaffold0674 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 4298 - 4233
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  4298 cttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatttt 4233  T

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Target: scaffold0665 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 8265 - 8216
Alignment:
Q  107 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8265 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 18661 - 18738
Alignment:
Q  96 aatgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||| | |||||| |  |||||||||||||    
T  18661 aatgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat 18738  T

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Target: scaffold0197; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 13796 - 13858
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||| ||||||||| ||||||| ||||||||||   ||||||||||||    
T  13796 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat 13858  T

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Target: scaffold0137 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 5871 - 5934
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 174  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  5871 cttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgatt 5934  T

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Target: scaffold0259 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 1751 - 1813
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  1751 cttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 1813  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 86203 - 86153
Alignment:
Q  107 ttggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 156  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  86203 ttggcttcaaattttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 148456 - 148518
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  148456 cttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 148518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 176462 - 176524
Alignment:
Q  111 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 173  Q
    ||||||||| ||||||||| ||||||||| ||||||| ||||||||||   ||||||||||||    
T  176462 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgat 176524  T

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Target: scaffold0466 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 6750 - 6785
Alignment:
Q  141 aatcgtgacacgattttggcatcgtgacacgatttt 176  Q
    |||||||||||||||||||||||||| |||||||||    
T  6750 aatcgtgacacgattttggcatcgtggcacgatttt 6785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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