View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4581-Insertion-1 (Length: 1104)

Name: NF4581-Insertion-1
Description: NF4581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4581-Insertion-1
NF4581-Insertion-1
[»] scaffold0022 (2 HSPs)
scaffold0022 (117-1075)||(65423-66404)
scaffold0022 (8-100)||(64741-64833)
[»] chr8 (31 HSPs)
chr8 (817-960)||(4430038-4430182)
chr8 (879-962)||(30264109-30264194)
chr8 (900-962)||(32173093-32173156)
chr8 (879-962)||(25722847-25722932)
chr8 (899-962)||(11352907-11352971)
chr8 (900-962)||(18638307-18638370)
chr8 (874-962)||(24023179-24023269)
chr8 (879-962)||(30800490-30800575)
chr8 (817-855)||(5918843-5918881)
chr8 (817-954)||(13150045-13150190)
chr8 (817-855)||(38804485-38804523)
chr8 (874-962)||(43922318-43922408)
chr8 (879-962)||(4414948-4415035)
chr8 (879-935)||(33480986-33481045)
chr8 (818-962)||(45440753-45440899)
chr8 (892-962)||(1372687-1372759)
chr8 (892-962)||(24852567-24852639)
chr8 (900-962)||(8517791-8517854)
chr8 (900-962)||(27022741-27022804)
chr8 (901-962)||(1170597-1170659)
chr8 (817-855)||(1759470-1759508)
chr8 (817-855)||(2079183-2079221)
chr8 (817-855)||(11938020-11938058)
chr8 (900-953)||(15837404-15837458)
chr8 (874-962)||(41666633-41666723)
chr8 (879-962)||(1554866-1554951)
chr8 (900-960)||(13575429-13575490)
chr8 (900-952)||(29684333-29684386)
chr8 (900-960)||(33192434-33192495)
chr8 (902-962)||(33653582-33653643)
chr8 (874-932)||(38283787-38283847)
[»] chr6 (14 HSPs)
chr6 (879-960)||(1190612-1190698)
chr6 (882-962)||(14965327-14965408)
chr6 (881-962)||(26252839-26252922)
chr6 (879-962)||(3833772-3833857)
chr6 (879-962)||(31861941-31862026)
chr6 (879-946)||(10460224-10460294)
chr6 (879-963)||(20715929-20716017)
chr6 (817-855)||(32531323-32531361)
chr6 (879-962)||(31203926-31204011)
chr6 (881-962)||(17353200-17353283)
chr6 (900-962)||(2441528-2441592)
chr6 (879-962)||(6875014-6875099)
chr6 (879-962)||(7451607-7451692)
chr6 (879-962)||(22837495-22837580)
[»] chr4 (31 HSPs)
chr4 (879-962)||(13781573-13781658)
chr4 (817-962)||(20702621-20702767)
chr4 (879-962)||(23091202-23091287)
chr4 (900-960)||(37143229-37143290)
chr4 (879-962)||(55232514-55232599)
chr4 (879-962)||(21053991-21054075)
chr4 (900-962)||(43317644-43317707)
chr4 (817-962)||(35447497-35447644)
chr4 (879-962)||(7712693-7712778)
chr4 (879-954)||(12214456-12214533)
chr4 (900-962)||(35595514-35595577)
chr4 (819-865)||(17702660-17702706)
chr4 (817-862)||(376387-376432)
chr4 (879-962)||(894020-894105)
chr4 (879-962)||(5049130-5049215)
chr4 (879-962)||(49574977-49575062)
chr4 (903-962)||(10727456-10727516)
chr4 (903-962)||(10941225-10941285)
chr4 (819-855)||(17702396-17702432)
chr4 (892-958)||(38740689-38740757)
chr4 (819-866)||(669828-669875)
chr4 (874-950)||(2548529-2548607)
chr4 (900-962)||(13204091-13204152)
chr4 (874-962)||(21122320-21122410)
chr4 (817-855)||(37143616-37143654)
chr4 (879-932)||(56084987-56085041)
chr4 (879-962)||(549097-549181)
chr4 (818-855)||(5190637-5190674)
chr4 (818-855)||(15849758-15849795)
chr4 (879-962)||(26878507-26878592)
chr4 (879-962)||(44470330-44470415)
[»] chr5 (30 HSPs)
chr5 (874-962)||(40716321-40716411)
chr5 (879-962)||(3295702-3295787)
chr5 (879-958)||(1611903-1611983)
chr5 (903-962)||(32234497-32234557)
chr5 (900-962)||(32904363-32904426)
chr5 (899-960)||(6062090-6062152)
chr5 (817-866)||(936319-936368)
chr5 (900-960)||(43370273-43370334)
chr5 (818-944)||(28868144-28868273)
chr5 (818-855)||(9524098-9524135)
chr5 (879-962)||(27905079-27905164)
chr5 (817-862)||(42506447-42506492)
chr5 (817-865)||(14000664-14000712)
chr5 (886-944)||(24836882-24836942)
chr5 (892-962)||(42027545-42027617)
chr5 (879-944)||(831802-831869)
chr5 (879-944)||(4326232-4326299)
chr5 (879-962)||(7938013-7938099)
chr5 (900-962)||(8942748-8942811)
chr5 (879-948)||(17210778-17210849)
chr5 (879-944)||(36337491-36337558)
chr5 (818-865)||(39956006-39956053)
chr5 (818-932)||(834027-834142)
chr5 (874-962)||(2530338-2530428)
chr5 (817-855)||(3295812-3295850)
chr5 (817-855)||(16313458-16313496)
chr5 (817-855)||(28867411-28867449)
chr5 (900-959)||(39850939-39851000)
chr5 (879-962)||(6226088-6226173)
chr5 (817-854)||(31659594-31659631)
[»] chr3 (38 HSPs)
chr3 (879-962)||(26130872-26130957)
chr3 (892-962)||(51006267-51006339)
chr3 (817-962)||(7777660-7777807)
chr3 (879-962)||(7252182-7252267)
chr3 (902-962)||(9350215-9350276)
chr3 (879-962)||(18020521-18020606)
chr3 (900-962)||(19579424-19579487)
chr3 (817-855)||(13043141-13043179)
chr3 (817-855)||(13051218-13051256)
chr3 (879-955)||(21078744-21078822)
chr3 (899-962)||(35379456-35379521)
chr3 (874-962)||(39822488-39822578)
chr3 (817-866)||(265158-265207)
chr3 (879-962)||(611906-611991)
chr3 (879-962)||(3889857-3889942)
chr3 (818-855)||(7639665-7639702)
chr3 (879-962)||(35379957-35380042)
chr3 (874-962)||(3894994-3895087)
chr3 (892-962)||(3899687-3899759)
chr3 (874-944)||(18540448-18540520)
chr3 (892-958)||(31766564-31766632)
chr3 (900-962)||(5530701-5530764)
chr3 (906-960)||(5812018-5812073)
chr3 (900-962)||(18874638-18874701)
chr3 (817-852)||(35379573-35379608)
chr3 (881-961)||(12565390-12565472)
chr3 (881-961)||(13259789-13259871)
chr3 (817-855)||(19245535-19245573)
chr3 (899-948)||(21091892-21091942)
chr3 (819-865)||(22177562-22177608)
chr3 (817-855)||(25478955-25478993)
chr3 (817-855)||(42896637-42896675)
chr3 (900-960)||(7639550-7639611)
chr3 (879-962)||(8149431-8149516)
chr3 (879-962)||(9861838-9861923)
chr3 (818-855)||(18388610-18388647)
chr3 (900-960)||(45701833-45701894)
chr3 (900-962)||(51833729-51833793)
[»] chr2 (29 HSPs)
chr2 (879-962)||(19039921-19040006)
chr2 (892-962)||(37610095-37610167)
chr2 (900-962)||(45407099-45407162)
chr2 (817-855)||(13594086-13594124)
chr2 (817-962)||(15265669-15265815)
chr2 (819-865)||(41014473-41014519)
chr2 (879-932)||(7929447-7929500)
chr2 (879-954)||(24004984-24005061)
chr2 (879-962)||(38692684-38692769)
chr2 (879-962)||(39271494-39271579)
chr2 (879-954)||(41122775-41122852)
chr2 (817-865)||(41633374-41633422)
chr2 (817-962)||(42057160-42057309)
chr2 (874-944)||(7536610-7536680)
chr2 (900-962)||(21839696-21839759)
chr2 (818-861)||(24004411-24004454)
chr2 (900-962)||(27359940-27360003)
chr2 (900-954)||(33134448-33134503)
chr2 (900-962)||(36080325-36080388)
chr2 (900-962)||(37867681-37867744)
chr2 (817-855)||(8875290-8875328)
chr2 (817-855)||(13450358-13450396)
chr2 (817-855)||(44019869-44019907)
chr2 (879-962)||(1397167-1397252)
chr2 (879-947)||(12617141-12617210)
chr2 (900-962)||(14371482-14371546)
chr2 (900-960)||(32689963-32690024)
chr2 (879-962)||(34063323-34063408)
chr2 (879-946)||(38147735-38147804)
[»] chr1 (43 HSPs)
chr1 (879-962)||(924995-925080)
chr1 (879-962)||(43723766-43723851)
chr1 (900-962)||(115789-115852)
chr1 (900-962)||(1531165-1531228)
chr1 (818-962)||(37705662-37705811)
chr1 (901-962)||(48715781-48715843)
chr1 (879-962)||(5935648-5935733)
chr1 (879-962)||(8574113-8574198)
chr1 (819-962)||(33933961-33934107)
chr1 (892-962)||(12264990-12265062)
chr1 (900-962)||(50943792-50943855)
chr1 (879-954)||(10172394-10172472)
chr1 (900-960)||(11409084-11409145)
chr1 (900-962)||(14746355-14746419)
chr1 (817-854)||(15470673-15470710)
chr1 (879-962)||(15476522-15476607)
chr1 (817-854)||(27307625-27307662)
chr1 (874-962)||(28071501-28071589)
chr1 (879-962)||(49162810-49162895)
chr1 (892-962)||(773074-773146)
chr1 (903-962)||(7297355-7297415)
chr1 (817-865)||(10729251-10729299)
chr1 (817-865)||(11842801-11842849)
chr1 (817-865)||(34011042-34011090)
chr1 (892-962)||(38619536-38619608)
chr1 (879-961)||(44667832-44667916)
chr1 (900-962)||(2666269-2666332)
chr1 (904-962)||(29717012-29717071)
chr1 (900-962)||(50884556-50884619)
chr1 (900-954)||(50946097-50946152)
chr1 (900-962)||(52043477-52043540)
chr1 (817-855)||(650149-650187)
chr1 (879-962)||(1569969-1570057)
chr1 (817-855)||(1581028-1581066)
chr1 (879-937)||(9398082-9398140)
chr1 (817-855)||(34749028-34749066)
chr1 (879-932)||(39728352-39728406)
chr1 (817-855)||(44648440-44648478)
chr1 (879-962)||(7548558-7548643)
chr1 (817-866)||(15597530-15597579)
chr1 (879-932)||(25298175-25298228)
chr1 (883-962)||(34969239-34969320)
chr1 (879-962)||(43577379-43577464)
[»] scaffold0193 (1 HSPs)
scaffold0193 (885-962)||(21408-21487)
[»] chr7 (33 HSPs)
chr7 (817-959)||(1787056-1787199)
chr7 (879-959)||(48103571-48103653)
chr7 (817-865)||(21766028-21766076)
chr7 (892-962)||(39151886-39151958)
chr7 (817-865)||(46759431-46759479)
chr7 (900-962)||(27722767-27722830)
chr7 (879-962)||(30240724-30240812)
chr7 (879-959)||(8790902-8790984)
chr7 (817-962)||(10199479-10199629)
chr7 (817-855)||(15646959-15646997)
chr7 (817-855)||(39435177-39435215)
chr7 (879-962)||(9334800-9334885)
chr7 (879-962)||(23896758-23896843)
chr7 (879-962)||(41747625-41747710)
chr7 (879-962)||(46759501-46759586)
chr7 (819-855)||(2474884-2474920)
chr7 (817-865)||(5800444-5800492)
chr7 (879-960)||(581937-582020)
chr7 (900-962)||(7629011-7629074)
chr7 (881-962)||(20097795-20097878)
chr7 (881-962)||(27509740-27509822)
chr7 (900-962)||(38175011-38175074)
chr7 (900-962)||(42963212-42963275)
chr7 (879-922)||(46622282-46622325)
chr7 (817-855)||(581599-581637)
chr7 (874-962)||(1748513-1748603)
chr7 (886-954)||(12170639-12170709)
chr7 (819-865)||(23774700-23774746)
chr7 (874-935)||(29366031-29366093)
chr7 (817-866)||(4550507-4550556)
chr7 (892-932)||(21993116-21993157)
chr7 (900-960)||(25834692-25834753)
chr7 (879-932)||(34471052-34471105)
[»] scaffold0268 (1 HSPs)
scaffold0268 (817-960)||(21305-21452)
[»] scaffold0445 (1 HSPs)
scaffold0445 (879-962)||(4927-5012)
[»] scaffold0123 (1 HSPs)
scaffold0123 (818-963)||(30672-30819)
[»] scaffold0143 (1 HSPs)
scaffold0143 (879-935)||(5635-5694)
[»] scaffold0063 (1 HSPs)
scaffold0063 (879-962)||(33003-33088)
[»] scaffold0137 (1 HSPs)
scaffold0137 (900-962)||(6840-6903)
[»] scaffold0330 (1 HSPs)
scaffold0330 (817-855)||(18689-18727)
[»] scaffold0240 (1 HSPs)
scaffold0240 (817-855)||(2707-2745)
[»] scaffold0128 (1 HSPs)
scaffold0128 (879-963)||(43020-43106)
[»] scaffold0003 (1 HSPs)
scaffold0003 (879-932)||(227382-227436)


Alignment Details
Target: scaffold0022 (Bit Score: 606; Significance: 0; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 606; E-Value: 0
Query Start/End: Original strand, 117 - 1075
Target Start/End: Original strand, 65423 - 66404
Alignment:
Q  117 aatttggtaacttaagacgaacctacaatttgagaacaatgataagaagatgagatgaaaaacgatcatatacctgaagttttatggtgttttctggtgc 216  Q
    ||||||||||| || |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  65423 aatttggtaacctaggacgaacctacagtttgggaacaaggataagaagatgagatgaaaaacgatcatatacctgaagttttatggtgttttctggtgc 65522  T
Q  217 ggcttccatggtgaggtttcaaatcaagggttgattcagagctatcgggaagttgtcgatcgagtcgaagaatttgacgactgtgatgggaagaagaaga 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  65523 ggcttccatggtgaggtttcaaatcaagggttgattcagagctatcgggaagttgtcgatcgagtcgaagaatttgacggctgtgatgggaagaagaaga 65622  T
Q  317 acgacaacctttgttttggaacattgtacgaagaaaagaagcttccatagtattgaggtagtttacgtgtttttcatttgtccaaaacgacgcggtttta 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  65623 acgacaacctttgttttggaacattgtacgaagaaaagaagcttccatagtattgaggtagtttacgtgtttttcatttgtccaaaacgacgtggtttta 65722  T
Q  417 ctttctggtacttgcaccatagaagaatccatagctgtggaagaatgaatgggtttgtgctaaaagagatttcgaggaatgaagcaaaaatatgttggaa 516  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  65723 ctttctggtacttgcaccatagaagaatccataggtgtggaagaatgaatgggtttgtgttaaaagagatttcgaggaatgaagcaaaaatgtgttggaa 65822  T
Q  517 tttagaagaggttgtgannnnnnnnnnnnnnnnnnnnngaaggagaagaggtagtgatttttaacaatggttgtttttattttgatttataggagatttt 616  Q
    |||||||||||||||||                     ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  65823 tttagaagaggttgtga--tttttatgtttttttttttgaaagagaagaggtagtgatttttaacaatggttgtttttattttgatttataagagatttt 65920  T
Q  617 taatgaaggttgttaaaggttcggtttcttgtgtgatggtgatgaaataaatatcttagagaggtcagaggaaagtatgatgaaattgtagtagttg--- 713  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||       
T  65921 taatgaaggttgttaaaggttcggtttcttgtgtgatggtgatgaaataaatatcttagagaggtcggaggaaagtatgatgaaattgcagtagttgctt 66020  T
Q  714 --------ctttattagatctttttgaagtaacttgctttatgaggttgacacctgtattttatatgc---ctacaacaatatcatcatgcactttttct 802  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  66021 tattagatctttattagatctttttgaagtaacttgctttatgaggttgacacctgtattttatatgcctactacaacaatatcatcatgcactttttct 66120  T
Q  803 tatttgtattagcgcgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact-aa 901  Q
    || ||||  | | || |||||||||||||||||||||| |||| ||||||||  | ||||| ||       || ||||||| |||||| |||||||| ||    
T  66121 tacttgtccttgtgcatctttccgctctttttagtgcgttaacatttgaaaactgggaacgatatttttttatgatattttaatttttattaaaactaaa 66220  T
Q  902 aatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttc-atgacac--ac-atat-acaaatcaaacactaacacac 995  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || |||||||  || |||| |||||||||||  ||||||||    
T  66221 aatataaatgtttgttactgtcaagttataaaaaatcaaactaatcatgattatatatatcaatgacaccaacaatataacaaatcaaactgtaacacac 66320  T
Q  996 caccg-cttcta-cacagaca-cgtcgttgtaccctttttctatccacct--caatcaatactagtgttttccacgatgtagcct 1075  Q
    ||||| |||||| |||||||| || ||||||||||||||||||| |||||   |||||||||||||||||| |||||||||||||    
T  66321 caccgccttctaccacagacaccgccgttgtaccctttttctattcaccttcaaatcaatactagtgtttt-cacgatgtagcct 66404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 64741 - 64833
Alignment:
Q  8 tcaactggtaagacaaattatctctcaagatatttaacactacgagttcatacataaacctttagttaaattaaaagagatcatttatcaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  64741 tcaactggtaagacaaattatctctcaagatatttaacactacgagttcatacataaaccattagttaaattaaaagagatcatttatcaatg 64833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 817 - 960
Target Start/End: Original strand, 4430038 - 4430182
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaaa-tataaatgtttg 915  Q
    ||||||| ||||||||||| || ||||||||||||||||  ||||||||        |||| ||||||||||   |||||||||||| ||||||||||||    
T  4430038 cgtcttttcgctctttttattgtgctaacgtttgaaaattatgaacggt-gttttttataaaattttgatttagattaaaactaaaaatataaatgtttg 4430136  T
Q  916 ttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    || || ||||||||||| |||||||||||| ||| |||||||||||    
T  4430137 ttgctttcaagttataacaaatcaaactaaccatgattatatattt 4430182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 30264109 - 30264194
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||| ||||| |||||||    
T  30264109 attttgattttgattaaaactaaaaatataaatgtttgttactttcaagttataacaaatcaaactaaccatgattatttatttca 30264194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 32173156 - 32173093
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||    
T  32173156 aaaatataaatgtttgttactttcaagttataacaaatcaaactaatcatgattatttatttca 32173093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 25722932 - 25722847
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataaaaatc-aaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||| ||||||||||| ||||| ||| ||||||| || | ||||||||||| |||||||||||||    
T  25722932 attttgatttttattaaaactaaaaatataaatgtttattactttcaggttataacaaactaaactaatcatgattatatatttca 25722847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 899 - 962
Target Start/End: Complemental strand, 11352971 - 11352907
Alignment:
Q  899 taaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||| ||| |||||||||||||    
T  11352971 taaaatataaatgtttgttgctttcaagttataacaaatcaaactaaccattattatatatttca 11352907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 18638370 - 18638307
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||| ||||| |||||||    
T  18638370 aaaatataaatgtttgttgctttcaagttataacaaatcaaactaatcatgattatttatttca 18638307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 874 - 962
Target Start/End: Original strand, 24023179 - 24023269
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| ||||||||||   |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  24023179 ataaaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcatgattatttatttca 24023269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 30800490 - 30800575
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || || |||||||| |||||||||||| ||| ||||| |||||||    
T  30800490 attttgattttgattaaaactaaaaatataaatgtttgttgctttcgagttataacaaatcaaactaaccatgattatctatttca 30800575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 5918881 - 5918843
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5918881 cgtctttccgctctttttattgcgctaacgtttgaaaat 5918843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 954
Target Start/End: Complemental strand, 13150190 - 13150045
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaa-------atataaa 909  Q
    ||||||||||||||||||| |||| ||||||||||||||  | ||||||        || | |||||||||||  |||||||||||       |||||||    
T  13150190 cgtctttccgctctttttattgcgttaacgtttgaaaattattaacggtgttttttaatgaaattttgattttgattaaaactaaaaaaaaatatataaa 13150091  T
Q  910 tgtttgttactgtcaagttat-aaaaatcaaactaatcataattat 954  Q
    |||||||| || ||||| ||| |||||||||||||| |||||||||    
T  13150090 tgtttgttgctttcaaggtataaaaaatcaaactaaccataattat 13150045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 38804485 - 38804523
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38804485 cgtctttccgctctttttattgcgctaacgtttgaaaat 38804523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 874 - 962
Target Start/End: Complemental strand, 43922408 - 43922318
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| ||||||||||   |||||||||||| |||||||||||||  || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  43922408 ataaaattttgatttggattaaaactaaaaatataaatgtttgtcgctttcaagttataacaaagcaaactaatcatgattatttatttca 43922318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 4414948 - 4415035
Alignment:
Q  879 attttgatttttgttaaaactaaaa---tataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  ||||||||||||   ||||||| |||||| || ||||| |||| ||||||||||||||||| ||||| |||||||    
T  4414948 attttgattttgattaaaactaaaaaaatataaatatttgttgctttcaagctatagaaaatcaaactaatcatgattatttatttca 4415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 935
Target Start/End: Complemental strand, 33481045 - 33480986
Alignment:
Q  879 attttgatttttgttaaaactaaaa---tataaatgtttgttactgtcaagttataaaaa 935  Q
    |||||||||||| ||||||||||||   |||||||||||||| || ||||||||||||||    
T  33481045 attttgatttttattaaaactaaaaaaatataaatgtttgttgctttcaagttataaaaa 33480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 818 - 962
Target Start/End: Complemental strand, 45440899 - 45440753
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaaatat-aaatgtttgt 916  Q
    ||||||||||| ||| || |||||| ||||||||||||  ||| |||||       || | |||||||||||  |||||| |||||| | ||||||||||    
T  45440899 gtctttccgctatttctaatgcgctgacgtttgaaaattatgagcggtatttttttatgaaattttgattttgattaaaattaaaattttaaatgtttgt 45440800  T
Q  917 tactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |  | ||||||||||| |||||||||||| ||| ||||| |||||||    
T  45440799 tgttttcaagttataacaaatcaaactaaccatgattatctatttca 45440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 962
Target Start/End: Complemental strand, 1372759 - 1372687
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| || |||||||||||  | |||| |||||| ||| ||||||||||||||||||||||||||    
T  1372759 ttaaaactaaaaatacaaatgtttgttgttttcaacttataacaaaccaaactaatcataattatatatttca 1372687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 962
Target Start/End: Complemental strand, 24852639 - 24852567
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataaaaatc-aaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || |||| |||||| |||| ||||||||||| ||||| |||||||    
T  24852639 ttaaaactaaaaatataaatgtttgttgctttcaaattataacaatctaaactaatcatgattatctatttca 24852567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 8517791 - 8517854
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||| || || |||| |||||| |||||||| ||| |||||||||||||||||    
T  8517791 aaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccataattatatatttca 8517854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 27022741 - 27022804
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||||| ||| |||| ||||||| ||||| |||||||    
T  27022741 aaaatataaatgtttgttgctttcaagttataacaaaccaaaataatcatgattatttatttca 27022804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 901 - 962
Target Start/End: Complemental strand, 1170659 - 1170597
Alignment:
Q  901 aaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||| |||||||    
T  1170659 aaatataaatatttgttactttcaagttataacaaaccaaactaaccatgattatctatttca 1170597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 1759470 - 1759508
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  1759470 cgtctctccgctctttttattgcgctaacgtttgaaaat 1759508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 2079183 - 2079221
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  2079183 cgtctttccgctttttttactgcgctaacgtttgaaaat 2079221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 11938058 - 11938020
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  11938058 cgtcttttcgctctttttattgcgctaacgtttgaaaat 11938020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 900 - 953
Target Start/End: Original strand, 15837404 - 15837458
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataatta 953  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||||| ||||    
T  15837404 aaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcatgatta 15837458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 874 - 962
Target Start/End: Original strand, 41666633 - 41666723
Alignment:
Q  874 ataatattttgatttttgttaaaact-aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  |||||||| |||||||||||||||||| || | || |||||| ||| |||| ||| ||||||||| |||||||    
T  41666633 ataaaattttgattttgattaaaactaaaaatataaatgtttgttgctttaaaattataacaaaccaaaataaccataattatctatttca 41666723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 1554951 - 1554866
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||| || || ||||||||||| || |||||||||  || ||||| |||||||    
T  1554951 attttgattttgattaaaactaaaaatataaatgtttattgctttcaagttataacaattcaaactaacaatgattatctatttca 1554866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 960
Target Start/End: Original strand, 13575429 - 13575490
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    ||||||||||||||| || || ||||||||||| |||||||||||| ||| ||||| |||||    
T  13575429 aaaatataaatgttttttgctttcaagttataataaatcaaactaaccatgattatctattt 13575490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 952
Target Start/End: Complemental strand, 29684386 - 29684333
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataatt 952  Q
    |||||||||||||||| | || ||||||||||| ||| ||||||||||||||||    
T  29684386 aaaatataaatgtttgctgctttcaagttataataaaccaaactaatcataatt 29684333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 960
Target Start/End: Original strand, 33192434 - 33192495
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    ||||| |||||||||||| || ||||||||||| ||| |||||||||||| ||||| |||||    
T  33192434 aaaatttaaatgtttgttgctttcaagttataacaaaccaaactaatcatgattatttattt 33192495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 902 - 962
Target Start/End: Original strand, 33653582 - 33653643
Alignment:
Q  902 aatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||| || ||||||||||| ||| |||| ||| ||| |||||||||||||    
T  33653582 aatataaatgtttgttgctttcaagttataacaaaccaaattaaccatgattatatatttca 33653643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 874 - 932
Target Start/End: Complemental strand, 38283847 - 38283787
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa--tataaatgtttgttactgtcaagttataa 932  Q
    |||| |||||||||||  ||||||||||||  |||||||||||||| || |||||||||||    
T  38283847 ataaaattttgattttgattaaaactaaaaaatataaatgtttgttgctttcaagttataa 38283787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 1e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 879 - 960
Target Start/End: Complemental strand, 1190698 - 1190612
Alignment:
Q  879 attttgatttttgttaaaactaaaa----tataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatattt 960  Q
    |||||||||||| ||||||||||||    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||    
T  1190698 attttgatttttattaaaactaaaaaaattataaatgtttgttactttcaagttataaaaaatcaaactaatcatgattatctattt 1190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 882 - 962
Target Start/End: Complemental strand, 14965408 - 14965327
Alignment:
Q  882 ttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||||||| ||||||||||||  || ||||| |||||||    
T  14965408 ttgattttgattaaaactaaaatataaatgtttgttgctttcaagttataacaaatcaaactaactattattatctatttca 14965327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 881 - 962
Target Start/End: Original strand, 26252839 - 26252922
Alignment:
Q  881 tttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||  |||||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||| ||||| |||||||    
T  26252839 tttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatctatttca 26252922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 3833772 - 3833857
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||||||  | ||||||||||| |||||||||||| ||| ||||| |||||||    
T  3833772 attttgattttaattaaaactaaaaatataaatgtttgttgttttcaagttataacaaatcaaactaaccatgattatctatttca 3833857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 31862026 - 31861941
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| |||| ||| ||| ||| |||||||||||||    
T  31862026 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaattaaattaaccatgattatatatttca 31861941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 879 - 946
Target Start/End: Complemental strand, 10460294 - 10460224
Alignment:
Q  879 attttgatttttg-ttaaaactaaaat-ataaatgtttgttactgtcaagttataa-aaatcaaactaatc 946  Q
    ||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||| ||| ||||||||||    
T  10460294 attttgatttttgattaaaactaaaattataaatgtttgttgctttcaagttataacaaaccaaactaatc 10460224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 879 - 963
Target Start/End: Complemental strand, 20716017 - 20715929
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataaaaatca---aactaatcataattatatatttcat 963  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||||||  |   |||||||||| ||||| ||||||||    
T  20716017 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataaaaaaaactaaactaatcatgattatctatttcat 20715929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 32531361 - 32531323
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  32531361 cgtctttccgctctttttattgcgctaacgtttgaaaat 32531323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 31203926 - 31204011
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||| ||||| |||||||||||||| || ||||||||||| ||| |||||||| ||| ||||| |||||||    
T  31203926 attttgattttgattaaaattaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccatgattatctatttca 31204011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 881 - 962
Target Start/End: Complemental strand, 17353283 - 17353200
Alignment:
Q  881 tttgatttttgttaaaactaaaat-ataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||  ||||||||||||| ||||||||||||| || ||||||||||| |||  |||||||| || ||||| |||||||    
T  17353283 tttgattttgattaaaactaaaattataaatgtttgttgctttcaagttataacaaacaaaactaataatgattatctatttca 17353200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 2441592 - 2441528
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat--aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||| |||||  |||||||||||||| ||| ||||| |||||||    
T  2441592 aaaatataaatgtttgttgctttcacgttataaaaaaatcaaactaaccatgattatttatttca 2441528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 6875014 - 6875099
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||| ||||| |||||||||||||| || |||| ||| || ||||||||||||||||  |||| |||||||    
T  6875014 attttgattttgattaaaattaaaaatataaatgtttgttgctttcaaattaaaataaatcaaactaatcattgttatctatttca 6875099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 7451607 - 7451692
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||||||  | ||||| ||||| |||| ||||||| ||| ||||| |||||||    
T  7451607 attttgattttgattaaaactaaaactataaatgtttgttgttttcaagatataacaaattaaactaaccatgattatctatttca 7451692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 22837580 - 22837495
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||| |||||| || |||| |||||| | |||||||||| ||| ||||| |||||||    
T  22837580 attttgattttcattaaaactaaaaatataaatttttgttgctttcaaattataacacatcaaactaaccatgattatctatttca 22837495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 1e-16; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 13781658 - 13781573
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| ||||| |||||||    
T  13781658 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaatcatgattatctatttca 13781573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 817 - 962
Target Start/End: Complemental strand, 20702767 - 20702621
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact-aaaatataaatgtttg 915  Q
    ||||||||||||||||||| |||||||||||||||||||  | ||||||        || | ||||||||||   |||||||| ||||||||||||||||    
T  20702767 cgtctttccgctctttttattgcgctaacgtttgaaaattattaacggt-tttttttatgaaattttgatttggattaaaactaaaaatataaatgtttg 20702669  T
Q  916 ttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    || || |||||| |||| ||| |||||||||||| ||||| |||||||    
T  20702668 tttctttcaagtgataacaaaccaaactaatcatgattatttatttca 20702621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 23091202 - 23091287
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||| ||||| |||||||    
T  23091202 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatctatttca 23091287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 900 - 960
Target Start/End: Original strand, 37143229 - 37143290
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatattt 960  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||    
T  37143229 aaaatataaatgtttgttactttcaagttataaaaaatcaaactaatcatgattatctattt 37143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 55232514 - 55232599
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| ||||||||||||| |||| |||||||    
T  55232514 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcatagttatctatttca 55232599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 21053991 - 21054075
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||| ||||||||||||||||||| || |||||||| || ||| |||||||||||| ||||| |||||||    
T  21053991 attttgattttgattaaaattaaaatataaatgtttgttgctttcaagttaaaacaaaccaaactaatcatgattatttatttca 21054075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 43317707 - 43317644
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataaaaa-tcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || |||||||||||||| ||||||||| ||| |||||||||||||    
T  43317707 aaaatataaatgtttgttgctttcaagttataaaaactcaaactaaccatgattatatatttca 43317644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 817 - 962
Target Start/End: Original strand, 35447497 - 35447644
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaaa-tataaatgtttg 915  Q
    ||||||||||||||||||| || ||||| |||| |||||  |||||| |        || | ||||| |||||  |||||||||||| ||||||||||||    
T  35447497 cgtctttccgctctttttattgtgctaaggtttaaaaattatgaacgatgtttttttatgaaatttttattttgattaaaactaaaaatataaatgtttg 35447596  T
Q  916 ttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    || || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  35447597 ttgctttcaagttataataaaccaaactaatcatgattatctatttca 35447644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 7712778 - 7712693
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||  || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  7712778 attttgattttgattaaaactaaaaatataaatgtttgtagctttcaagttataacaaaccaaactaatcatgattatctatttca 7712693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 954
Target Start/End: Original strand, 12214456 - 12214533
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattat 954  Q
    |||||||||||  |||||| ||||| ||||||||||||||||| ||||||||||| ||| |||||||| |||||||||    
T  12214456 attttgattttgattaaaattaaaaatataaatgtttgttactttcaagttataacaaaccaaactaaccataattat 12214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 35595514 - 35595577
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  35595514 aaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcatgattatctatttca 35595577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 819 - 865
Target Start/End: Complemental strand, 17702706 - 17702660
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  17702706 tctttccgctctttttattgcgctaacgtttgaaaattatgaacggt 17702660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 817 - 862
Target Start/End: Complemental strand, 376432 - 376387
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaac 862  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||    
T  376432 cgtctttccgctctttttaatgcgctaatgtttgaaaattgtgaac 376387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 894105 - 894020
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || |||| |||||| |||||||||||| ||| ||||  |||||||    
T  894105 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaaattataacaaatcaaactaaccatgattaactatttca 894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 5049130 - 5049215
Alignment:
Q  879 attttgatttttgttaaaactaa-aatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||| |||||||||||||||| || ||||||||||| ||| ||||||||  || ||||| |||||||    
T  5049130 attttgattttgattaaaactaataatataaatgtttgttgctttcaagttataacaaaacaaactaacaattattatctatttca 5049215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 49575062 - 49574977
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || | ||||||||| ||| |||||||||||| ||||| |||||||    
T  49575062 attttgatttcgattaaaactaaaaatataaatgtttgttgcttttaagttataacaaaccaaactaatcatgattatttatttca 49574977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 903 - 962
Target Start/End: Complemental strand, 10727516 - 10727456
Alignment:
Q  903 atataaatgtttgttactgtcaagttataaaaa-tcaaactaatcataattatatatttca 962  Q
    ||||||||||||| | || |||||||||||||| ||||||||||||| ||||| |||||||    
T  10727516 atataaatgtttgctgctttcaagttataaaaaatcaaactaatcatgattatctatttca 10727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 903 - 962
Target Start/End: Complemental strand, 10941285 - 10941225
Alignment:
Q  903 atataaatgtttgttactgtcaagttataaaaa-tcaaactaatcataattatatatttca 962  Q
    ||||||||||||| | || |||||||||||||| ||||||||||||| ||||| |||||||    
T  10941285 atataaatgtttgctgctttcaagttataaaaaatcaaactaatcatgattatctatttca 10941225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 819 - 855
Target Start/End: Original strand, 17702396 - 17702432
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17702396 tctttccgctctttttactgcgctaacgtttgaaaat 17702432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 958
Target Start/End: Original strand, 38740689 - 38740757
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatat 958  Q
    |||||||||||| ||||||||||||||  | |||| |||||| ||| ||||||||||||||||||||||    
T  38740689 ttaaaactaaaaatataaatgtttgttgttttcaacttataacaaaccaaactaatcataattatatat 38740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 819 - 866
Target Start/End: Complemental strand, 669875 - 669828
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggta 866  Q
    ||||||||||||||||| ||| |||||||||||||||  |||||||||    
T  669875 tctttccgctctttttattgcactaacgtttgaaaattatgaacggta 669828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 874 - 950
Target Start/End: Complemental strand, 2548607 - 2548529
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataa 950  Q
    |||| |||||||||||  |||||||||||| ||||||||||||||| | ||| ||||||| ||| |||||||| |||||    
T  2548607 ataaaattttgattttgattaaaactaaaaatataaatgtttgttattttcaggttataacaaaccaaactaaccataa 2548529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 13204091 - 13204152
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataaaaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||| ||| ||||| |||||||    
T  13204091 aaaatataaatgtttgttgtt-tcaagttataacaatcaaactaaccatgattatttatttca 13204152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 874 - 962
Target Start/End: Complemental strand, 21122410 - 21122320
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  ||||||| |||| ||||||||||||||  | ||||||||||| ||| |||||||| ||| ||||| |||||||    
T  21122410 ataaaattttgattttgattaaaacaaaaaatataaatgtttgttgttttcaagttataacaaaccaaactaaccatgattatctatttca 21122320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 37143616 - 37143654
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  37143616 cgtctttccgctttttttattgcgctaacgtttgaaaat 37143654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 879 - 932
Target Start/End: Original strand, 56084987 - 56085041
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa 932  Q
    |||||||||||  |||||||||||| |||||||||||||| || |||||||||||    
T  56084987 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataa 56085041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 549181 - 549097
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||||||  | ||| ||||||| |||||||||||| ||| ||||| |||||||    
T  549181 attttgattttgattaaaactaaaaatataaatgtttgttgttttca-gttataacaaatcaaactaaccatgattatctatttca 549097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 5190674 - 5190637
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  5190674 gtctttccgctctttttattgcgctaacatttgaaaat 5190637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 15849795 - 15849758
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||||||||| || ||||||||||||||||    
T  15849795 gtctttccgctctttttattgggctaacgtttgaaaat 15849758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 26878507 - 26878592
Alignment:
Q  879 attttgatttttgttaaaact-aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||| ||||||| |||||||||| || |||| |||||| ||| |||||||| ||| ||||| |||||||    
T  26878507 attttgattttgattaaaactaaaaatattaatgtttgttgctttcaaattataacaaaccaaactaaccatgattatctatttca 26878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 44470415 - 44470330
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||| |||||| || || |||||||| ||| |||| ||||||| ||||| |||||||    
T  44470415 attttgattttgattaaaactaaaaatataaatatttgttgctttctagttataacaaaccaaattaatcatgattatttatttca 44470330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 874 - 962
Target Start/End: Complemental strand, 40716411 - 40716321
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  |||||||||||| |||||| ||||||| || ||||||||||| |||||||||||||||| ||||| |||||||    
T  40716411 ataaaattttgattttgattaaaactaaaaatataaaggtttgtttctttcaagttataacaaatcaaactaatcatgattatctatttca 40716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 3295787 - 3295702
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  ||||||| |||| |||||||||||||| || ||||||||||| |||||||||||| ||| |||||||||||||    
T  3295787 attttgattttgattaaaacaaaaaatataaatgtttgttgctttcaagttataataaatcaaactaaccatgattatatatttca 3295702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 879 - 958
Target Start/End: Original strand, 1611903 - 1611983
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataaaaatcaaactaatcataattatatat 958  Q
    ||||||| |||  |||||||||||| |||| ||||||||| || ||||||||||| ||||||||||| |||||||||||||    
T  1611903 attttgaatttgattaaaactaaaaatatatatgtttgttgctttcaagttataacaatcaaactaaccataattatatat 1611983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 903 - 962
Target Start/End: Original strand, 32234497 - 32234557
Alignment:
Q  903 atataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||    
T  32234497 atataaatgtttgttactttcaagttataaaaaatcaaactaatcatgattatttatttca 32234557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 32904363 - 32904426
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||| ||||| |||||||    
T  32904363 aaaatataaatgtttgttgctttcaagttataaaaaatcaaactaatcatgattatctatttca 32904426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 899 - 960
Target Start/End: Complemental strand, 6062152 - 6062090
Alignment:
Q  899 taaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatattt 960  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||| |||||    
T  6062152 taaaatataaatgtttgttgctttcaagttataaaaaatcaaactaatcatgattatctattt 6062090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 817 - 866
Target Start/End: Complemental strand, 936368 - 936319
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggta 866  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  936368 cgtctttccgctctttttattgcgctaacgtttgaaaattatgaacggta 936319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 900 - 960
Target Start/End: Complemental strand, 43370334 - 43370273
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatattt 960  Q
    |||||||||||||||||| || |||||||||| ||||||||||||| ||||||||| |||||    
T  43370334 aaaatataaatgtttgttgctttcaagttataaaaaatcaaactaaccataattatctattt 43370273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 818 - 944
Target Start/End: Original strand, 28868144 - 28868273
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt-annnnnnnataatattttgatttttgttaaaact-aaaatataaatgtttg 915  Q
    |||||||||||||||||| |||||| ||||||||||||  |||| ||| |       |||| |||||||||||  |||||||| ||||| ||||||||||    
T  28868144 gtctttccgctctttttactgcgctgacgtttgaaaattatgaaaggtgatttttttataagattttgattttgattaaaactaaaaatgtaaatgtttg 28868243  T
Q  916 ttactgtcaagttataa-aaatcaaactaa 944  Q
    || || ||||||||||| ||| ||||||||    
T  28868244 ttgctttcaagttataacaaaccaaactaa 28868273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 9524135 - 9524098
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9524135 gtctttccgctctttttattgcgctaacgtttgaaaat 9524098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 27905164 - 27905079
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||| |||||  |||||||||||| ||||||||||||||  | ||||||||||| ||| |||||||||||| ||||| |||||||    
T  27905164 attttaattttgattaaaactaaaaatataaatgtttgttgttttcaagttataacaaaccaaactaatcatgattatctatttca 27905079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 817 - 862
Target Start/End: Complemental strand, 42506492 - 42506447
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaac 862  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||||    
T  42506492 cgtcttttcgctctttttattgcgctaacgtttgaaaatcatgaac 42506447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 865
Target Start/End: Complemental strand, 14000712 - 14000664
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||    
T  14000712 cgtctttccgctctttttattgcgttaacgtttgaaaattatgaacggt 14000664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 886 - 944
Target Start/End: Complemental strand, 24836942 - 24836882
Alignment:
Q  886 tttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaa 944  Q
    ||||| |||||||||||| |||||||||||||| || ||||||||||| ||||||||||||    
T  24836942 tttttattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaa 24836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 962
Target Start/End: Original strand, 42027545 - 42027617
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| ||||||||| |||| || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  42027545 ttaaaactaaaaatataaatgtctgttgctttcaagttataacaaaccaaactaatcatgattatttatttca 42027617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 944
Target Start/End: Complemental strand, 831869 - 831802
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaa 944  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| ||||||||    
T  831869 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaa 831802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 944
Target Start/End: Original strand, 4326232 - 4326299
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaa 944  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| ||||||||    
T  4326232 attttgattttgattaaaactaaaaatataaatgtttgtttctttcaagttataacaaaccaaactaa 4326299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 7938013 - 7938099
Alignment:
Q  879 attttgatttttgttaaaactaaaa--tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  ||||||||||||  |||||||||||||| || ||||||||||| |||  ||||||| ||| ||||| |||||||    
T  7938013 attttgattttgattaaaactaaaaaatataaatgtttgttgctttcaagttataacaaactaaactaaccatgattatctatttca 7938099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 8942748 - 8942811
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||| |||||| || ||||||||||| |||||||||||||||  ||||| |||||||    
T  8942748 aaaatataaatatttgttgctttcaagttataacaaatcaaactaatcaagattatttatttca 8942811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 948
Target Start/End: Complemental strand, 17210849 - 17210778
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcat 948  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||||||| ||| ||||||||||||    
T  17210849 attttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcat 17210778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 944
Target Start/End: Complemental strand, 36337558 - 36337491
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaa 944  Q
    |||||||||| | |||||||||||| ||||||||||||||||| |||||| |||| ||| ||||||||    
T  36337558 attttgatttatattaaaactaaaaatataaatgtttgttactttcaagtaataacaaaccaaactaa 36337491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 818 - 865
Target Start/End: Complemental strand, 39956053 - 39956006
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    |||||||||||||||||| ||||||||| |||||||||  ||||||||    
T  39956053 gtctttccgctctttttattgcgctaacatttgaaaattatgaacggt 39956006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 818 - 932
Target Start/End: Original strand, 834027 - 834142
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaa-atataaatgtttgt 916  Q
    |||||||||||||||||| |||| ||||||||||||||  |||| | |        || | |||||||||||  ||||||||||| |||||||||||| |    
T  834027 gtctttccgctctttttattgcgttaacgtttgaaaattatgaatgatgtttttttatgaaattttgattttaattaaaactaaagatataaatgttttt 834126  T
Q  917 tactgtcaagttataa 932  Q
    | || |||||||||||    
T  834127 tgctttcaagttataa 834142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 874 - 962
Target Start/End: Complemental strand, 2530428 - 2530338
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  |||||||||||| |||||||||||||| || | || |||||| ||| |||||||||| | ||||| |||||||    
T  2530428 ataaaattttgattttgattaaaactaaaaatataaatgtttgttgcttttaaattataacaaaccaaactaatcgtgattatctatttca 2530338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 3295850 - 3295812
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  3295850 cgtctttccgctctttttattgtgctaacgtttgaaaat 3295812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 16313496 - 16313458
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  16313496 cgtcttttcgctctttttattgcgctaacgtttgaaaat 16313458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 28867411 - 28867449
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  28867411 cgtctttccgctctttttattgcgctaacctttgaaaat 28867449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 900 - 959
Target Start/End: Complemental strand, 39851000 - 39850939
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata--aaaatcaaactaatcataattatatatt 959  Q
    |||||||||||||||||| || ||||||||||  ||||| ||||||||||| ||||| ||||    
T  39851000 aaaatataaatgtttgtttctttcaagttataacaaaataaaactaatcatgattatttatt 39850939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 6226088 - 6226173
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||| |||||  |||||||||||| |||||||||||||| || ||||||||||| ||||||||| ||  || ||||| |||||||    
T  6226088 attttaattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaaccaactatgattatctatttca 6226173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 854
Target Start/End: Complemental strand, 31659631 - 31659594
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaa 854  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  31659631 cgtctttccgttctttttattgcgctaacgtttgaaaa 31659594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 26130957 - 26130872
Alignment:
Q  879 attttgatttttgttaaaact-aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||| ||| ||||| |||||||    
T  26130957 attttgattttgattaaaacttaaaatataaatgtttgtcactttcaagttataacaaatcaaactaaccatgattatctatttca 26130872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 892 - 962
Target Start/End: Complemental strand, 51006339 - 51006267
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| ||||| |||||||    
T  51006339 ttaaaactaaaaatataaatgtttgttgctctcaagttataacaaatcaaactaatcatgattatttatttca 51006267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 817 - 962
Target Start/End: Complemental strand, 7777807 - 7777660
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaaa-tataaatgtttg 915  Q
    |||||| |||||||||||| | |||||| ||||||||||  | || ||||       |||| ||||||||||   ||||||| |||| ||||||||||||    
T  7777807 cgtcttaccgctctttttattacgctaatgtttgaaaattattaatggtatttttttataaaattttgatttggattaaaacaaaaaatataaatgtttg 7777708  T
Q  916 ttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    || || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  7777707 ttgctttcaagttataacaaaccaaactaatcatgattatttatttca 7777660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 7252182 - 7252267
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||| |||||| || | ||||||||| ||| |||||||||||||||||| |||||||    
T  7252182 attttgattttgattaaaactaaaaatataaatatttgtttcttttaagttataacaaaccaaactaatcataattatttatttca 7252267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 902 - 962
Target Start/End: Complemental strand, 9350276 - 9350215
Alignment:
Q  902 aatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||| || |||||||||| ||||||||||||| ||| |||||||||||||    
T  9350276 aatataaatgtttgttgctttcaagttataaaaaatcaaactaaccatgattatatatttca 9350215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 18020606 - 18020521
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||| |||||| |||||||||||| |||||||||||||| || |||| |||||  |||||||||||||||| ||||| |||||||    
T  18020606 atttttatttttattaaaactaaaaatataaatgtttgttgctttcaaattatagcaaatcaaactaatcatgattatctatttca 18020521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 19579424 - 19579487
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||| ||||||||||| |||||| ||||| |||||||    
T  19579424 aaaatataaatgtttgttgctttcaagttataaaaaatcaaaccaatcatgattatctatttca 19579487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 13043141 - 13043179
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13043141 cgtctttccgctctttttattgcgctaacgtttgaaaat 13043179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 13051218 - 13051256
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13051218 cgtctttccgctctttttattgcgctaacgtttgaaaat 13051256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 879 - 955
Target Start/End: Complemental strand, 21078822 - 21078744
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattata 955  Q
    |||||||||||  |||||||||||| |||||||||| ||| || ||||||||||| ||| |||||||||||| ||||||    
T  21078822 attttgattttgattaaaactaaaaatataaatgttggttgctttcaagttataacaaaccaaactaatcatgattata 21078744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 899 - 962
Target Start/End: Complemental strand, 35379521 - 35379456
Alignment:
Q  899 taaaatataaatgtttgttactgtcaagttata--aaaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||| || ||||||||||  ||||||||||||| ||| ||||| |||||||    
T  35379521 taaaatataaatgtttgttgctttcaagttataaaaaaatcaaactaaccatgattatctatttca 35379456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 874 - 962
Target Start/End: Original strand, 39822488 - 39822578
Alignment:
Q  874 ataatattttgatttttgttaaaact-aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  |||||||| ||||||||||||||||||  | ||||| ||||| |||||||||||||||  ||||| |||||||    
T  39822488 ataaaattttgattttgattaaaactaaaaatataaatgtttgttgatttcaagctataacaaatcaaactaatcacgattatttatttca 39822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 817 - 866
Target Start/End: Complemental strand, 265207 - 265158
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggta 866  Q
    ||||||||||||||||||| ||||||||||||||||| |  |||||||||    
T  265207 cgtctttccgctctttttattgcgctaacgtttgaaagttatgaacggta 265158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 611991 - 611906
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||||||| ||| |||| ||||||| ||||| |||||||    
T  611991 attttgatttagattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaaataatcatgattatttatttca 611906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 3889857 - 3889942
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || | ||||||||| ||| |||||||||||| ||||| |||||||    
T  3889857 attttgatttggattaaaactaaaaatataaatgtttgttgcttttaagttataacaaaccaaactaatcatgattatttatttca 3889942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 7639702 - 7639665
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7639702 gtctttccgctctttttattgcgctaacgtttgaaaat 7639665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 35380042 - 35379957
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||| | | ||||| |||||||    
T  35380042 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccttgattatctatttca 35379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 874 - 962
Target Start/End: Complemental strand, 3895087 - 3894994
Alignment:
Q  874 ataatattttgatttttgttaaaact----aaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  ||||||||    ||||||||||||||||||  | |||||||||| ||||||||||||| ||| ||||| |||||||    
T  3895087 ataaaattttgattttgattaaaactttaaaaaatataaatgtttgttgttttcaagttataaaaaatcaaactaaccatgattatctatttca 3894994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 962
Target Start/End: Original strand, 3899687 - 3899759
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || | ||||||||| ||| |||||||||||| ||||| |||||||    
T  3899687 ttaaaactaaaaatataaatgtttgttgcttttaagttataacaaaccaaactaatcatgattatttatttca 3899759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 874 - 944
Target Start/End: Original strand, 18540448 - 18540520
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaa 944  Q
    |||| |||||||||||  |||||||||||| |||||||| ||||| || ||||||||||| ||||||||||||    
T  18540448 ataaaattttgattttgattaaaactaaaaatataaatgcttgttgctttcaagttataacaaatcaaactaa 18540520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 958
Target Start/End: Original strand, 31766564 - 31766632
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatat 958  Q
    |||||||||||| ||||||||||||||  | |||| |||||| ||| ||||||||||||||||||||||    
T  31766564 ttaaaactaaaaatataaatgtttgttgttttcaacttataacaaaccaaactaatcataattatatat 31766632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 5530764 - 5530701
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    ||||||||||| |||||| || |||||||||| ||||||||||||| ||| ||||| |||||||    
T  5530764 aaaatataaatatttgttgctttcaagttataaaaaatcaaactaaccatgattatctatttca 5530701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 906 - 960
Target Start/End: Original strand, 5812018 - 5812073
Alignment:
Q  906 taaatgtttgttactgtcaagttataaaaatc-aaactaatcataattatatattt 960  Q
    ||||||||||||||| |||||||||||||| | ||||||||||| ||||| |||||    
T  5812018 taaatgtttgttactttcaagttataaaaaacaaaactaatcattattatttattt 5812073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 18874638 - 18874701
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataaaaa-tcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||  | |||||||||||||| ||||||||| ||| ||||| |||||||    
T  18874638 aaaatataaatgtttgttgttttcaagttataaaaattcaaactaaccatgattatctatttca 18874701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 817 - 852
Target Start/End: Complemental strand, 35379608 - 35379573
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaa 852  Q
    ||||||||||||||||||| ||||||||||||||||    
T  35379608 cgtctttccgctctttttattgcgctaacgtttgaa 35379573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 881 - 961
Target Start/End: Original strand, 12565390 - 12565472
Alignment:
Q  881 tttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttc 961  Q
    ||||||||| ||||| ||||||| |||||||||||||| || ||||||||||| |||||||| |||  || ||||| ||||||    
T  12565390 tttgattttggttaacactaaaaatataaatgtttgttgctttcaagttataagaaatcaaattaactatgattatctatttc 12565472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 881 - 961
Target Start/End: Original strand, 13259789 - 13259871
Alignment:
Q  881 tttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttc 961  Q
    ||||||||| ||||| ||||||| |||||||||||||| || ||||||||||| |||||||| |||  || ||||| ||||||    
T  13259789 tttgattttggttaacactaaaaatataaatgtttgttgctttcaagttataagaaatcaaattaactatgattatctatttc 13259871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 19245573 - 19245535
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  19245573 cgtctttccgctctttttattgcgctaacgtttaaaaat 19245535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 899 - 948
Target Start/End: Original strand, 21091892 - 21091942
Alignment:
Q  899 taaaatataaatgtttgttactgtcaagttataaa-aatcaaactaatcat 948  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||||||||    
T  21091892 taaaatataaatgtttgttgctttcaagtaataaataatcaaactaatcat 21091942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 819 - 865
Target Start/End: Complemental strand, 22177608 - 22177562
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||| |||| ||||||||||||||  ||||||||    
T  22177608 tctttccgctctttttattgcgttaacgtttgaaaattatgaacggt 22177562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 25478955 - 25478993
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  25478955 cgtctttccgctctttttattgcgctgacgtttgaaaat 25478993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 42896637 - 42896675
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  42896637 cgtctttccgctctttttattgcgctaacgtttcaaaat 42896675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 960
Target Start/End: Complemental strand, 7639611 - 7639550
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatattt 960  Q
    ||||||||||||||| || || |||||||||| ||||||||||||| ||| ||||| |||||    
T  7639611 aaaatataaatgtttattgctttcaagttataaaaaatcaaactaaccatgattatctattt 7639550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 8149431 - 8149516
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataaaaat-caaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||||||  | ||||||||||| ||| ||||||||  || ||||| |||||||    
T  8149431 attttgattttgattaaaactaaaaatataaatgtttgttgttttcaagttataacaatccaaactaacaatgattatctatttca 8149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 9861923 - 9861838
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| ||||||||||||||  | ||||||||||| |||  ||||||||||| ||||| |||||||    
T  9861923 attttgatttggattaaaactaaaaatataaatgtttgttgttttcaagttataacaaactaaactaatcatgattatttatttca 9861838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 818 - 855
Target Start/End: Original strand, 18388610 - 18388647
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  18388610 gtctttccgctctttttattgccctaacgtttgaaaat 18388647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 960
Target Start/End: Original strand, 45701833 - 45701894
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    ||||||||||||||||||  | ||||||||||| ||| |||||||||||| ||||| |||||    
T  45701833 aaaatataaatgtttgttgttttcaagttataacaaaccaaactaatcatgattatttattt 45701894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 51833729 - 51833793
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat--aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || |||| ||||  |||||||||||||| ||| ||||| |||||||    
T  51833729 aaaatataaatgtttgttgctttcaaattataaaaaaatcaaactaaccatgattatctatttca 51833793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 19040006 - 19039921
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  ||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||||| ||||| |||||||    
T  19040006 attttgattttgattaaaacaaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaatcatgattatctatttca 19039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 892 - 962
Target Start/End: Complemental strand, 37610167 - 37610095
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || ||||||||||| ||||||||||| |||| ||||| |||||||    
T  37610167 ttaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactagtcatgattatttatttca 37610095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 45407162 - 45407099
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||  | ||||||||||| |||||||||||||||| ||||| |||||||    
T  45407162 aaaatataaatgtttgttgttttcaagttataacaaatcaaactaatcatgattatttatttca 45407099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 13594086 - 13594124
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13594086 cgtctttccgctctttttattgcgctaacgtttgaaaat 13594124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 962
Target Start/End: Complemental strand, 15265815 - 15265669
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact-aaaatataaatgtttg 915  Q
    ||||||||||||||||||| | |||||||||||||||||  ||| ||||        || ||| |||||||||  |||||||| |||| |||||| ||||    
T  15265815 cgtctttccgctctttttattacgctaacgtttgaaaattatgagcggtgtttttttatgatactttgattttgattaaaactaaaaacataaatctttg 15265716  T
Q  916 ttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    || || ||||||||||| ||| |||||| ||||| ||||| |||||||    
T  15265715 ttgctttcaagttataacaaaccaaact-atcatgattatctatttca 15265669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 819 - 865
Target Start/End: Complemental strand, 41014519 - 41014473
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  41014519 tctttccgctctttttattgcgctaacgtttgaaaattatgaacggt 41014473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 932
Target Start/End: Original strand, 7929447 - 7929500
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa 932  Q
    |||||||||||  |||||||||||||||||||||||||| || || ||||||||    
T  7929447 attttgattttgattaaaactaaaatataaatgtttgttgctttctagttataa 7929500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 954
Target Start/End: Original strand, 24004984 - 24005061
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattat 954  Q
    |||||||||||| |||| ||||||| |||||||||||||| || ||||||||||| ||| |||||||| ||| |||||    
T  24004984 attttgatttttattaagactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccatgattat 24005061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 38692769 - 38692684
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || | ||||||||| ||| ||||||||||||  |||| |||||||    
T  38692769 attttgattttgattaaaactaaaaatataaatgtttgttgctttgaagttataacaaaccaaactaatcatggttatctatttca 38692684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 39271494 - 39271579
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||| ||||||||||||| || ||||||||||| || ||||||||||| ||| ||||||||||||  |||| |||||||    
T  39271494 atttcgattttggttaaaactaaaaatacaaatgtttgttgctttcaagttataacaaaccaaactaatcatggttatttatttca 39271579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 954
Target Start/End: Complemental strand, 41122852 - 41122775
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattat 954  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||||||||| || ||| |||||    
T  41122852 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaacgaaccatgattat 41122775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 865
Target Start/End: Complemental strand, 41633422 - 41633374
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||| ||||||| |||||||||||||||||||  ||||||||    
T  41633422 cgtctttccgcactttttattgcgctaacgtttgaaaattatgaacggt 41633374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 962
Target Start/End: Original strand, 42057160 - 42057309
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact----aaaatataaatgt 912  Q
    ||||||| ||||||||||| |||||||||||||||||||  ||||||||        || | ||||| |||||  |||||| |    |||||||||||||    
T  42057160 cgtcttttcgctctttttattgcgctaacgtttgaaaattatgaacggt-gttttttatgaaattttaattttgattaaaattttaaaaaatataaatgt 42057258  T
Q  913 ttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||  | ||||||||| |||||||||||||| ||| ||||| |||||||    
T  42057259 ttgttgttttcaagttataaaaaatcaaactaaccatgattatctatttca 42057309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 874 - 944
Target Start/End: Original strand, 7536610 - 7536680
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa-aaatcaaactaa 944  Q
    |||| |||||||||||  |||||||||||| ||||||||||||| || ||||||||||| ||| ||||||||    
T  7536610 ataaaattttgattttgattaaaactaaaa-ataaatgtttgttgctttcaagttataacaaaccaaactaa 7536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 21839759 - 21839696
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || |||||||||| |||||| |||||| ||| ||||| |||||||    
T  21839759 aaaatataaatgtttgttgctttcaagttataaaaaatctaactaaccatgattatctatttca 21839696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 818 - 861
Target Start/End: Original strand, 24004411 - 24004454
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaa 861  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||    
T  24004411 gtctttccgctctttttattgcgccaacgtttgaaaattgtgaa 24004454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 27359940 - 27360003
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||  | ||||||||||| |||||||| ||||||| ||||| |||||||    
T  27359940 aaaatataaatgtttgttgttttcaagttataacaaatcaaattaatcatgattatttatttca 27360003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 954
Target Start/End: Original strand, 33134448 - 33134503
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattat 954  Q
    |||||||||||||||||| || ||||||||||| |||||||||||| ||| |||||    
T  33134448 aaaatataaatgtttgttgctttcaagttataataaatcaaactaaccatgattat 33134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 36080388 - 36080325
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||| || || |||| |||||| |||||||||||| ||||||||| |||||||    
T  36080388 aaaatataaatgttttttgctttcaaattataacaaatcaaactaaccataattatctatttca 36080325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 37867744 - 37867681
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||  || ||||| |||||||    
T  37867744 aaaatataaatgtttgttgctttcaagttataacaaatcaaactaactatgattatctatttca 37867681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 8875290 - 8875328
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  8875290 cgtctttccgctctttttattgcgctaacatttgaaaat 8875328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 13450396 - 13450358
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  13450396 cgtctttccgctctttttattgcgctaatgtttgaaaat 13450358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 44019869 - 44019907
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  44019869 cgtctttccgctctttttattgcgccaacgtttgaaaat 44019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 1397252 - 1397167
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| ||||||  |||||||||||| |||||||||||||| || || |||||||| |||  ||||||||||| ||||| |||||||    
T  1397252 atttcgattttgattaaaactaaaaatataaatgtttgttgctttctagttataacaaagaaaactaatcatgattatctatttca 1397167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 947
Target Start/End: Original strand, 12617141 - 12617210
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatca 947  Q
    ||||| |||||  |||||| |||||||||||||||| || || ||||||||||| |||||||| ||||||    
T  12617141 attttaattttgattaaaagtaaaatataaatgttttttgctttcaagttataacaaatcaaattaatca 12617210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 14371546 - 14371482
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata--aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| ||||| || ||||||||||  ||||||||||||| ||| ||||| |||||||    
T  14371546 aaaatataaatgattgttgctttcaagttataaaaaaatcaaactaaccatgattatttatttca 14371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 960
Target Start/End: Original strand, 32689963 - 32690024
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    |||||||||||||||||| || ||||||||||| |||  ||||||| ||||||||| |||||    
T  32689963 aaaatataaatgtttgttgctttcaagttataacaaactaaactaaccataattatctattt 32690024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 34063408 - 34063323
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||  ||||| ||| ||||| |||||| ||||| |||||||    
T  34063408 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaaactataacaaaccaaacaaatcatgattatctatttca 34063323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 946
Target Start/End: Complemental strand, 38147804 - 38147735
Alignment:
Q  879 attttgatttttgttaaaactaaaat-ataaatgtttgttactgtcaagttataa-aaatcaaactaatc 946  Q
    ||||||||||   |||||||||| || |||||||||||||||| ||||||||||| ||| ||||||||||    
T  38147804 attttgatttggattaaaactaatattataaatgtttgttactttcaagttataacaaaccaaactaatc 38147735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 924995 - 925080
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||||||| |||||||    
T  924995 attttgatttggattaaaactaaaactataaatgtttgttgctttcaagttataacaaatcaaactaaccataattatttatttca 925080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 43723766 - 43723851
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||| ||||| |||||||    
T  43723766 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataataaatcaaactaaccatgattatttatttca 43723851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 115789 - 115852
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || |||||| |||| |||||||||||||||| |||||||||||||    
T  115789 aaaatataaatgtttgttgctttcaagtaataacaaatcaaactaatcatgattatatatttca 115852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 1531165 - 1531228
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||| |||||||||||||| ||||||||| |||||||    
T  1531165 aaaatataaatgtttgttgctttcaagttataaaaaatcaaactaaccataattatctatttca 1531228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 818 - 962
Target Start/End: Original strand, 37705662 - 37705811
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact----aaaatataaatgtt 913  Q
    ||||||| |||||||||| |||||||||||||||||||  ||||||||        || | |||||||||||  |||||| |    ||||||| ||||||    
T  37705662 gtctttctgctctttttattgcgctaacgtttgaaaattatgaacggtgtttttttatgaaattttgattttgattaaaattaaagaaaatatcaatgtt 37705761  T
Q  914 tgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||| || ||||||||| |||||||||||||| ||| ||||| |||||||    
T  37705762 tgttgctttcaagttataaaaaatcaaactaaccatgattatctatttca 37705811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 901 - 962
Target Start/End: Original strand, 48715781 - 48715843
Alignment:
Q  901 aaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||| |||||||    
T  48715781 aaatataaatgtttgttactttcaagttataaaaaaccaaactaatcatgattatttatttca 48715843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 5935733 - 5935648
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||  |||||||| ||| ||||||||| |||||||    
T  5935733 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttatagcaaatcaaattaaccataattatctatttca 5935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 8574198 - 8574113
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||| ||| ||||| |||||||    
T  8574198 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccatgattatctatttca 8574113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 819 - 962
Target Start/End: Original strand, 33933961 - 33934107
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnn-ataatattttgatttttgttaaaactaaaa-tataaatgtttgt 916  Q
    ||||||||||||||||| ||||||||| ||| |||||  ||||||||         |||| |||||||||||| |||||||||||| |||||||||||||    
T  33933961 tctttccgctctttttattgcgctaacatttaaaaattatgaacggtgttttttttataaaattttgatttttattaaaactaaaattataaatgtttgt 33934060  T
Q  917 tactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |  | ||||||| ||| ||| |||||||| || |||||| |||||||    
T  33934061 tcatttcaagttgtaacaaaacaaactaaccaaaattatttatttca 33934107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 892 - 962
Target Start/End: Complemental strand, 12265062 - 12264990
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || ||||||||||| |||||||||||| ||| ||||| |||||||    
T  12265062 ttaaaactaaaaatataaatgtttgttgctttcaagttataagaaatcaaactaaccatgattatctatttca 12264990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 50943792 - 50943855
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||| || || |||| |||||| |||||||||||||||| |||||||||||||    
T  50943792 aaaatataaatgtttttttctttcaaattataacaaatcaaactaatcatgattatatatttca 50943855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 879 - 954
Target Start/End: Complemental strand, 10172472 - 10172394
Alignment:
Q  879 attttgatttttg-ttaaaacta-aaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattat 954  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || |||| |||||| |||||||||||| ||| |||||    
T  10172472 attttgatttttgattaaaactacaaatataaatgtttgttgctttcaatttataacaaatcaaactaaccatgattat 10172394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 900 - 960
Target Start/End: Complemental strand, 11409145 - 11409084
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    ||||||||||||||||||||| |||| ||| || |||||||||||||||| ||||| |||||    
T  11409145 aaaatataaatgtttgttactttcaaattaaaacaaatcaaactaatcatgattatctattt 11409084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 14746355 - 14746419
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataaaaa--tcaaactaatcataattatatatttca 962  Q
    |||||| |||||||||||||| ||||||||||||||  ||||||||| ||| ||||| |||||||    
T  14746355 aaaataaaaatgtttgttactttcaagttataaaaaagtcaaactaaccatgattatctatttca 14746419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 817 - 854
Target Start/End: Complemental strand, 15470710 - 15470673
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaa 854  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15470710 cgtctttccgctctttttattgcgctaacgtttgaaaa 15470673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 15476607 - 15476522
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||  || ||||| |||||||    
T  15476607 attttgattttgattaaaactaaaaatataaatgtttgttgttttcaagttataacaaatcaaactaactatgattatctatttca 15476522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 817 - 854
Target Start/End: Original strand, 27307625 - 27307662
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaa 854  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  27307625 cgtctttccgctctttttattgcgctaacgtttgaaaa 27307662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 874 - 962
Target Start/End: Original strand, 28071501 - 28071589
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| |||||||||||  |||||||||||| ||||||||||||| || ||||||||||| ||| |||| ||||||| ||||  |||||||    
T  28071501 ataaaattttgattttgattaaaactaaaa-ataaatgtttgttgctttcaagttataacaaaccaaagtaatcatgattacttatttca 28071589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 49162895 - 49162810
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  ||||||| |||| ||||||||| |||| || ||||||||||| |||||||||||| ||| ||||| |||||||    
T  49162895 attttgattttgattaaaaccaaaaatataaatgtatgttgctttcaagttataataaatcaaactaaccatcattatctatttca 49162810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 962
Target Start/End: Original strand, 773074 - 773146
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || ||||||||||  ||| |||||||||||| ||||| |||||||    
T  773074 ttaaaactaaaaatataaatgtttgttgctttcaagttatattaaaccaaactaatcatgattatttatttca 773146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 903 - 962
Target Start/End: Complemental strand, 7297415 - 7297355
Alignment:
Q  903 atataaatgtttgttactgtcaagttataaaaa-tcaaactaatcataattatatatttca 962  Q
    ||||||| ||||||| || |||||||||||||| ||||||||||||| ||||| |||||||    
T  7297415 atataaacgtttgttgctttcaagttataaaaaatcaaactaatcatgattatctatttca 7297355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 865
Target Start/End: Original strand, 10729251 - 10729299
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||    
T  10729251 cgtctttccgctctttttattgcgctaacgtttggaaattatgaacggt 10729299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 865
Target Start/End: Original strand, 11842801 - 11842849
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||    
T  11842801 cgtctttccgctctttttattgcgttaacgtttgaaaattatgaacggt 11842849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 865
Target Start/End: Original strand, 34011042 - 34011090
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| ||| |||||||||||||||  ||||||||    
T  34011042 cgtctttccgctctttttattgcactaacgtttgaaaattatgaacggt 34011090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 892 - 962
Target Start/End: Original strand, 38619536 - 38619608
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| || ||||||| ||| ||| |||||||||||| ||||| |||||||    
T  38619536 ttaaaactaaaaatataaatgtttgttgctttcaagttttaacaaaccaaactaatcatgattatttatttca 38619608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 879 - 961
Target Start/End: Complemental strand, 44667916 - 44667832
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttc 961  Q
    |||||||||||  |||||||||||| ||||||||||||||  | |||| |||||| |||||||||||| ||| ||||| ||||||    
T  44667916 attttgattttgattaaaactaaaaatataaatgtttgttgttttcaaattataacaaatcaaactaaccatgattatctatttc 44667832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 2666332 - 2666269
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttata-aaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || |||||||||| |||||||||| || ||| ||||| |||||||    
T  2666332 aaaatataaatgtttgttgctttcaagttataaaaaatcaaacaaaccatgattatctatttca 2666269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 904 - 962
Target Start/End: Complemental strand, 29717071 - 29717012
Alignment:
Q  904 tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||| |||||| || ||||||||||| |||||||||||||||| ||||| |||||||    
T  29717071 tataaatatttgttgctttcaagttataataaatcaaactaatcatgattatctatttca 29717012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 50884556 - 50884619
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||||| |||  ||||||||||| ||||| |||||||    
T  50884556 aaaatataaatgtttgttgctttcaagttataacaaactaaactaatcatgattatttatttca 50884619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 954
Target Start/End: Original strand, 50946097 - 50946152
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattat 954  Q
    |||||||||||||||||| || ||||||||| |||||||||||||| ||| |||||    
T  50946097 aaaatataaatgtttgttgctttcaagttataaaaaatcaaactaaccatgattat 50946152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Complemental strand, 52043540 - 52043477
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataaaa-atcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || ||||||||||||| | |||| |||| |||||||| |||||||    
T  52043540 aaaatataaatgtttgttgctttcaagttataaaagaccaaattaattataattatttatttca 52043477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 650149 - 650187
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  650149 cgtctttccgctctttttattgcgctaacatttgaaaat 650187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 1569969 - 1570057
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagt---tataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||   ||||| ||| |||||||||||||||||| |||||||    
T  1569969 attttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttagtataacaaaccaaactaatcataattatttatttca 1570057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 1581028 - 1581066
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  1581028 cgtctttccgctctttttattgcgctaaagtttgaaaat 1581066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 879 - 937
Target Start/End: Complemental strand, 9398140 - 9398082
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataaaaatc 937  Q
    ||||| |||||  |||||||||||| ||||||||||||| || ||||||||||| ||||    
T  9398140 attttaattttgattaaaactaaaaaataaatgtttgttgctttcaagttataacaatc 9398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 34749066 - 34749028
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  34749066 cgtctttccactctttttattgcgctaacgtttgaaaat 34749028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 879 - 932
Target Start/End: Complemental strand, 39728406 - 39728352
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa 932  Q
    |||||||||||  |||||||||||| |||||||||||||| || |||||||||||    
T  39728406 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataa 39728352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 44648478 - 44648440
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  44648478 cgtctttccgctctttttattgtgctaacgtttgaaaat 44648440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 7548643 - 7548558
Alignment:
Q  879 attttgatttttgttaaaact-aaaatataaatgtttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||| ||||||||||||||| || || |||| |||| ||||| |||||||| ||| ||||| |||||||    
T  7548643 attttgattttgattaaaacttaaaatataaatgtttattgctttcaatttataaaaaaccaaactaaccatgattatttatttca 7548558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 866
Target Start/End: Complemental strand, 15597579 - 15597530
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggta 866  Q
    ||||||| |||| |||||||||||||||| |||||||||  |||||||||    
T  15597579 cgtcttttcgctatttttagtgcgctaacttttgaaaattatgaacggta 15597530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 932
Target Start/End: Complemental strand, 25298228 - 25298175
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa 932  Q
    ||||||||||   ||||||| |||||||||||||||||| || |||||||||||    
T  25298228 attttgatttggattaaaacaaaaatataaatgtttgttgctttcaagttataa 25298175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 883 - 962
Target Start/End: Original strand, 34969239 - 34969320
Alignment:
Q  883 tgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||  |||||||||||| ||||||||||| || || ||||||||||| ||| |||||||| ||| ||||| |||||||    
T  34969239 tgattttgattaaaactaaaaatataaatgtttatttctttcaagttataacaaaccaaactaaccatcattatctatttca 34969320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 43577379 - 43577464
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || | ||||||||| |||| ||||||| | | ||||| |||||||    
T  43577379 attttgattttgattaaaactaaaaatataaatgtttgtttcttttaagttataacaaattaaactaaccgtgattatctatttca 43577464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 885 - 962
Target Start/End: Original strand, 21408 - 21487
Alignment:
Q  885 atttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||||||| ||| |||||||||| || ||||||||||| |||||||||||| ||| ||||| |||||||    
T  21408 atttttgttaaaactaaaaatattaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatttatttca 21487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 817 - 959
Target Start/End: Complemental strand, 1787199 - 1787056
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaaa-tataaatgtttg 915  Q
    ||||||||||||||||| | |||| ||||||||||||||  |||||| ||       || | |||||||||||  |||| ||||||| ||||||||||||    
T  1787199 cgtctttccgctcttttaattgcgttaacgtttgaaaattatgaacgatatttttttatgacattttgatttta-ttaatactaaaaatataaatgtttg 1787101  T
Q  916 ttactgtcaagttataa-aaatcaaactaatcataattatatatt 959  Q
    || || ||||||||||| |||||||||||| ||| ||||| ||||    
T  1787100 ttgctttcaagttataacaaatcaaactaaccatgattatttatt 1787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 879 - 959
Target Start/End: Original strand, 48103571 - 48103653
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatt 959  Q
    |||||||||||  |||||||||||| |||||||||||||| || |||| |||||| |||||||||||||||| ||||| ||||    
T  48103571 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaaattataacaaatcaaactaatcatgattatctatt 48103653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 817 - 865
Target Start/End: Original strand, 21766028 - 21766076
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  21766028 cgtctttccgctctttttattgcgctaacgtttgaaaattatgaacggt 21766076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 892 - 962
Target Start/End: Complemental strand, 39151958 - 39151886
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||| |||||||||||||| ||  |||||||||| |||||||||||| ||| |||||||||||||    
T  39151958 ttaaaactaaaaatataaatgtttgttgcttccaagttataataaatcaaactaaccatgattatatatttca 39151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 817 - 865
Target Start/End: Original strand, 46759431 - 46759479
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  46759431 cgtctttccgctctttttattgcgctaacgtttgaaaataatgaacggt 46759479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 27722767 - 27722830
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataaaaa-tcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || |||||||||||||| ||||||||| ||| ||||| |||||||    
T  27722767 aaaatataaatgtttgttgctttcaagttataaaaattcaaactaaccatgattatctatttca 27722830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 30240724 - 30240812
Alignment:
Q  879 attttgatttttgttaaaactaaaa----tataaatgtttgttactgtcaagttataaa-aatcaaactaatcataattatatatttca 962  Q
    |||||||||||  ||||||||||||    ||||||| ||||||||| |||||||||||| ||||||||||| ||| ||||| |||||||    
T  30240724 attttgattttgattaaaactaaaaaaattataaatatttgttactttcaagttataaagaatcaaactaaccatgattatctatttca 30240812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 879 - 959
Target Start/End: Complemental strand, 8790984 - 8790902
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatt 959  Q
    |||||||||||  |||||||||||| || ||||||||||| || ||||||||||| |||||||||||| ||| ||||| ||||    
T  8790984 attttgattttgattaaaactaaaaatacaaatgtttgttgctttcaagttataacaaatcaaactaaccatgattatctatt 8790902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 962
Target Start/End: Original strand, 10199479 - 10199629
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact-----aaaatataaatg 911  Q
    ||||||||||||||||||| |||||||| ||||||||||  ||||| ||        || | |||||||||||  ||||||||     ||||||||||||    
T  10199479 cgtctttccgctctttttattgcgctaaagtttgaaaattatgaactgtgtttttttatga-attttgattttgattaaaacttaaaaaaaatataaatg 10199577  T
Q  912 tttgttactgtcaagttat-aaaaatcaaactaatcataattatatatttca 962  Q
    |||||| || | ||||||| ||||||||||||||  |||||||| |||||||    
T  10199578 tttgttgcttttaagttataaaaaatcaaactaacaataattatttatttca 10199629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 15646959 - 15646997
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15646959 cgtctttccgctctttttattgcgctaacgtttgaaaat 15646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 39435215 - 39435177
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  39435215 cgtctttccgctctttttattgcgctaacgtttgaaaat 39435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 9334885 - 9334800
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || | || |||||| ||||||||||||  |||||||| |||||||    
T  9334885 attttgattttgattaaaactaaaaatataaatgtttgttgcttttaaattataacaaatcaaactaaatataattatttatttca 9334800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 23896843 - 23896758
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| |||| |||||||  |||| |||||||    
T  23896843 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaaataatcatggttatctatttca 23896758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 41747625 - 41747710
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||| ||| ||| |||||||||||| ||||| |||||||    
T  41747625 attttgatttggtttaaaactaaaaatataaatgtttgttgctttcaagttgtaacaaaccaaactaatcatgattatttatttca 41747710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Original strand, 46759501 - 46759586
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||  |||||| ||||| |||||||||||||| ||  |||||||||| |||||||||||| ||| ||||| |||||||    
T  46759501 attttgattttcattaaaattaaaaatataaatgtttgttgcttacaagttataacaaatcaaactaaccatgattatctatttca 46759586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 819 - 855
Target Start/End: Original strand, 2474884 - 2474920
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2474884 tctttccgctctttttactgcgctaacgtttgaaaat 2474920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 817 - 865
Target Start/End: Complemental strand, 5800492 - 5800444
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    ||||||||||||||||||| |||||||| ||||||||||  ||||||||    
T  5800492 cgtctttccgctctttttattgcgctaatgtttgaaaattatgaacggt 5800444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 960
Target Start/End: Original strand, 581937 - 582020
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    |||||||||||  |||||||||||| |||||||||||||| || ||||||||||| |||| |||| || ||| ||||| |||||    
T  581937 attttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaataaaacgaaccatgattatctattt 582020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 7629011 - 7629074
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||| || || |||| |||||| |||||||||||||||| ||||| |||||||    
T  7629011 aaaatataaatgttttttgctttcaaattataacaaatcaaactaatcatgattatctatttca 7629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 881 - 962
Target Start/End: Original strand, 20097795 - 20097878
Alignment:
Q  881 tttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||  |||||||||||| |||| |||||||| ||| | || |||||| ||||||||||||| |||||||| |||||||    
T  20097795 tttgattttgattaaaactaaaaatatatatgtttgtgacttttaaattataataaatcaaactaattataattatctatttca 20097878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 881 - 962
Target Start/End: Complemental strand, 27509822 - 27509740
Alignment:
Q  881 tttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||  |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||| ||| ||||| |||||||    
T  27509822 tttgattttgtttaaaactaaaaatataaatgtttgtttctttcaagttataacaaaccaaactaaccat-attatctatttca 27509740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 38175011 - 38175074
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||| || || |||| |||||| |||||||||||||||| ||||| |||||||    
T  38175011 aaaatataaatgttttttgctttcaaattataacaaatcaaactaatcatgattatctatttca 38175074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 42963212 - 42963275
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||||||| || || |||| |||||| |||||||||||| ||||||||| |||||||    
T  42963212 aaaatataaatgttttttgctttcaaattataacaaatcaaactaaccataattatctatttca 42963275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 879 - 922
Target Start/End: Original strand, 46622282 - 46622325
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgt 922  Q
    |||||||||||  |||||||||||||||||||||||||| ||||    
T  46622282 attttgattttgattaaaactaaaatataaatgtttgttgctgt 46622325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 581599 - 581637
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  581599 cgtctttccgctttttttattgcgctaacgtttgaaaat 581637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 874 - 962
Target Start/End: Complemental strand, 1748603 - 1748513
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||| ||||||||||   |||||||||||| |||||||||||||| || |||| |||||| |||||||| ||||| | ||||| |||||||    
T  1748603 ataaaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaaattataacaaatcaaattaatcgtgattatttatttca 1748513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 886 - 954
Target Start/End: Complemental strand, 12170709 - 12170639
Alignment:
Q  886 tttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattat 954  Q
    ||||| |||||||||||| || |||||||||||| | ||||||||||| ||| |||||||||||| |||||    
T  12170709 tttttattaaaactaaaaatacaaatgtttgttattttcaagttataacaaaccaaactaatcatgattat 12170639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 819 - 865
Target Start/End: Original strand, 23774700 - 23774746
Alignment:
Q  819 tctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggt 865  Q
    |||||||||| |||||| ||| ||||||||||||||| |||||||||    
T  23774700 tctttccgctatttttattgctctaacgtttgaaaattgtgaacggt 23774746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 874 - 935
Target Start/End: Original strand, 29366031 - 29366093
Alignment:
Q  874 ataatattttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataaaaa 935  Q
    |||| |||||||||||  |||||||||||| |||||||||||| | || ||||||||||||||    
T  29366031 ataaaattttgattttgattaaaactaaaaatataaatgtttgctgctttcaagttataaaaa 29366093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 866
Target Start/End: Complemental strand, 4550556 - 4550507
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggta 866  Q
    ||||||||||||||||||| |||  ||||||||||||||  |||||||||    
T  4550556 cgtctttccgctctttttattgccttaacgtttgaaaattatgaacggta 4550507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 892 - 932
Target Start/End: Original strand, 21993116 - 21993157
Alignment:
Q  892 ttaaaactaaaa-tataaatgtttgttactgtcaagttataa 932  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  21993116 ttaaaactaaaaatataaatgtttgttactttcaagttataa 21993157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 900 - 960
Target Start/End: Complemental strand, 25834753 - 25834692
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatattt 960  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||| ||| ||||| |||||    
T  25834753 aaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccatgattatctattt 25834692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 879 - 932
Target Start/End: Complemental strand, 34471105 - 34471052
Alignment:
Q  879 attttgatttttgttaaaactaaaatataaatgtttgttactgtcaagttataa 932  Q
    ||||||||||   ||||||||||||| |||||||||||| || |||||||||||    
T  34471105 attttgatttagattaaaactaaaatgtaaatgtttgttgctttcaagttataa 34471052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 817 - 960
Target Start/End: Complemental strand, 21452 - 21305
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaact----aaaatataaatgt 912  Q
    ||||||||||||||||||| |||||||| ||||||||||  ||||| ||        || | |||||||||||  ||||||||    |||||||||||||    
T  21452 cgtctttccgctctttttattgcgctaaagtttgaaaattatgaactgtgtttttttatga-attttgattttgattaaaacttaaaaaaatataaatgt 21354  T
Q  913 ttgttactgtcaagttata-aaaatcaaactaatcataattatatattt 960  Q
    ||||| || |||||||||| |||||||||||||  |||||||| |||||    
T  21353 ttgttgctttcaagttataaaaaatcaaactaacaataattatttattt 21305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 5012 - 4927
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||||||| ||| |||||||||||| ||||| |||||||    
T  5012 attttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcatgattatttatttca 4927  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 818 - 963
Target Start/End: Original strand, 30672 - 30819
Alignment:
Q  818 gtctttccgctctttttagtgcgctaacgtttgaaaatcgtgaacggtannnnnnnataatattttgatttttgttaaaactaaaa-tataaatgtttgt 916  Q
    |||||| ||||||||||| ||||||||| || ||||||  ||||||||        || | |||| ||||||  |||||||||||| |||||||||||||    
T  30672 gtcttttcgctctttttattgcgctaactttagaaaattttgaacggtgtttttttatgaaatttagattttgattaaaactaaaaatataaatgtttgt 30771  T
Q  917 tactgtcaagttataa-aaatcaaactaatcataattatatatttcat 963  Q
    |  | ||| ||||||| |||||||||||| ||| ||||| ||||||||    
T  30772 tgttttcatgttataacaaatcaaactaaccatgattatctatttcat 30819  T

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Target: scaffold0143 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 935
Target Start/End: Original strand, 5635 - 5694
Alignment:
Q  879 attttgatttttgttaaaactaaaa---tataaatgtttgttactgtcaagttataaaaa 935  Q
    |||||||||||| ||||||||||||   |||||||||||||| || ||||||||||||||    
T  5635 attttgatttttattaaaactaaaaagatataaatgtttgttgctttcaagttataaaaa 5694  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 879 - 962
Target Start/End: Complemental strand, 33088 - 33003
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    ||||||||||   |||||||||||| |||||||||||||| || ||||||||||| ||| ||||| |||||| ||||| |||||||    
T  33088 attttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaagcaaacgaatcatgattatttatttca 33003  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 900 - 962
Target Start/End: Original strand, 6840 - 6903
Alignment:
Q  900 aaaatataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttca 962  Q
    |||||||||||||||||| || | ||||||||| ||| |||||||||||| ||||| |||||||    
T  6840 aaaatataaatgtttgttgcttttaagttataacaaaccaaactaatcatgattatttatttca 6903  T

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Target: scaffold0330 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 18727 - 18689
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  18727 cgtctttccgctctttttattgcgctaacgtttaaaaat 18689  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 817 - 855
Target Start/End: Complemental strand, 2745 - 2707
Alignment:
Q  817 cgtctttccgctctttttagtgcgctaacgtttgaaaat 855  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  2745 cgtctttccgctctttttattgcgctaacgtttaaaaat 2707  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 879 - 963
Target Start/End: Original strand, 43020 - 43106
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa-aaatcaaactaatcataattatatatttcat 963  Q
    |||||||||||  |||||| ||||| |||||||| ||||| || |||| |||||| ||| |||||||||||| ||||| ||||||||    
T  43020 attttgattttgattaaaagtaaaaatataaatgattgtttctttcaaattataacaaagcaaactaatcatgattatctatttcat 43106  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 879 - 932
Target Start/End: Complemental strand, 227436 - 227382
Alignment:
Q  879 attttgatttttgttaaaactaaaa-tataaatgtttgttactgtcaagttataa 932  Q
    |||||||||||  |||||||||||| ||||||||||||||||| |||| ||||||    
T  227436 attttgattttatttaaaactaaaaatataaatgtttgttactttcaaattataa 227382  T

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