View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4581-Insertion-10 (Length: 327)
Name: NF4581-Insertion-10
Description: NF4581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4581-Insertion-10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 7 - 327
Target Start/End: Complemental strand, 38321370 - 38321054
Alignment:
| Q |
7 |
aagaacatacatgatatactatgaaagcaaaataaaagaatgagattactttcaagttacaacaaatnnnnnnnntagtaatattattactaggttaatg |
106 |
Q |
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| T |
38321370 |
aagaacatacatgatatactatgaaagcaaaataaaagaatgagattactttcaagttacaacaaataaaaaaa-tagtaatattattactatga-aatg |
38321273 |
T |
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| Q |
107 |
ttattattaacaaattacccgatttagagcagcttcttcataaccaccttgtattagctcaaccaaatcttttcttaattgcctcactattgcatctttc |
206 |
Q |
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| T |
38321272 |
ttattattaacaaattacccggtttagagcagcttcttcataaccaccttgtattagctcaaccaaatcttttcttaattgcctaactattgcatctttc |
38321173 |
T |
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| Q |
207 |
ttgttcttgagaagcttgattctgtaccttgctctcttaatagccttcttactgtaaaacaaagaaaaaaccaaacatgaaatcatgcatgcaatcatat |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
38321172 |
ttgttcttgagaagcttgattctgtaccttgctctcttaatagccttcttactgtaaaacaa--aaaaaaccaaacatgaaatcatgcatgcaatcatat |
38321075 |
T |
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| Q |
307 |
gatttcaatttacatatatag |
327 |
Q |
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||||||||||||||||||||| |
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| T |
38321074 |
gatttcaatttacatatatag |
38321054 |
T |
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