View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4582-Insertion-1 (Length: 1149)

Name: NF4582-Insertion-1
Description: NF4582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4582-Insertion-1
NF4582-Insertion-1
[»] chr4 (6 HSPs)
chr4 (7-612)||(32601980-32602583)
chr4 (701-1066)||(32602699-32603067)
chr4 (701-937)||(23562073-23562306)
chr4 (125-192)||(23822018-23822085)
chr4 (125-183)||(13214643-13214701)
chr4 (698-727)||(32602668-32602697)
[»] chr8 (4 HSPs)
chr8 (705-1033)||(9680764-9681091)
chr8 (702-990)||(5188583-5188868)
chr8 (125-184)||(30029070-30029129)
chr8 (138-183)||(43019825-43019870)
[»] chr3 (3 HSPs)
chr3 (701-1005)||(31072369-31072670)
chr3 (125-192)||(28762214-28762281)
chr3 (250-315)||(48259464-48259529)
[»] scaffold0867 (1 HSPs)
scaffold0867 (709-1000)||(1103-1391)
[»] chr1 (3 HSPs)
chr1 (709-1005)||(19992533-19992825)
chr1 (276-363)||(789282-789369)
chr1 (125-191)||(2199210-2199276)
[»] chr7 (3 HSPs)
chr7 (889-999)||(9213270-9213381)
chr7 (125-200)||(25614144-25614219)
chr7 (702-768)||(9213088-9213154)
[»] chr5 (1 HSPs)
chr5 (125-192)||(10110900-10110967)
[»] scaffold0103 (1 HSPs)
scaffold0103 (138-191)||(29996-30049)


Alignment Details
Target: chr4 (Bit Score: 438; Significance: 0; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 7 - 612
Target Start/End: Original strand, 32601980 - 32602583
Alignment:
Q  7 acttacttctagtcatctttactgaatgcaagctattattat---aaattgttacttgagaaatgttttggttgtccaacaacgtatatttatattgcat 103  Q
    |||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32601980 acttacttctagccatctttactgaatgcaagctattattattataaattgttacttgagaaatgttttggttgtccaacaacgtatatttatattgtat 32602079  T
Q  104 aagtaatatatcannnnnnnnaattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgtttaataattatt 203  Q
    |||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32602080 aagtaatatatcatttttt--aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgtttaataattgtt 32602177  T
Q  204 gannnnnnn-atgtttaaataacgtttctcttgttccttaaaaccctaaaattaaatgttctcaaagaccgtttgagcttttattaacatgtatttgttt 302  Q
    ||        || |||||||||| ||||| ||||  |||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  32602178 gatttttttgatatttaaataacatttcttttgtcacttaaaaccccaaaattaaatgttctcaaagatcgtttgagctttcattaacatgtatttgttt 32602277  T
Q  303 ggtttcatgatctagatttgatgtaagatttaaaaaagtattgcttagatgagttttacatcgaaggtggctaattatcattccaacaagccttagataa 402  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32602278 ggtttcatgatctagatttgatataagatttaaaaaagtattgtttagatgagttttacatcgaaggtggctaattatcattccaacaagccgtagataa 32602377  T
Q  403 ctctcgttctcttgtaaacaaacactgggcggtatggatatatttatattttttgataataccctatatattcacattatgtgaataacggctagtttcc 502  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  32602378 ctctcgttctcttgtaaacaaacactgggcggtatggatatatttatattttttg---ataccctatatattcacattatgtgaataacggctagtttcc 32602474  T
Q  503 actacattatatcaagataatacctaatatttatatttaatacccaaaactcaatatgtg-ataacggctagtttccaatatatcatatttttggaagga 601  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  32602475 actacattatatcaagataatacccaatatt--tatttaatgcccaaaactcaatatgtgaataacggctagtttccaatatattatatttttggaagga 32602572  T
Q  602 aatgcatgtcg 612  Q
    |||||||||||    
T  32602573 aatgcatgtcg 32602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 701 - 1066
Target Start/End: Original strand, 32602699 - 32603067
Alignment:
Q  701 aaacatatataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtat 800  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  32602699 aaacatatataataatatcaattaagtccatatttttctctaatcacgtcatacaaaaaatcataatcatttagttgtcttggattcatatttgatgtat 32602798  T
Q  801 cctttgtgagtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaa 900  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||    || ||||||||||||||||||    
T  32602799 cctttgtgagtatttgtaaatcattgatcttcgaccttttcctatcatcttcaactctttgcaactcggcatcaa----ccctttttctctctatctcaa 32602894  T
Q  901 gtttttcactctcaatacgtgcat-atcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaatttgggagtaga 999  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32602895 gtttttcactctcaatacgtgcataatcacgtgcaaaccctgacattaattctaatcttttgttgaagtcatctttcaaagcatcaaatttgggagtaga 32602994  T
Q  1000 cattt-cacaggcttttc-tttcccttcttttttgc--gcttttga-cga-tggactttgtggtggattgtat 1066  Q
    ||||| |||||||||||| |||||||||||||||||   ||||||| ||| ||||| ||||||||||||||||    
T  32602995 catttccacaggcttttcttttcccttcttttttgccgccttttgaccgattggacgttgtggtggattgtat 32603067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 701 - 937
Target Start/End: Original strand, 23562073 - 23562306
Alignment:
Q  701 aaacatatataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtat 800  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| | |||||||| | |||||||| ||||||||||||| ||||||||| || ||||    
T  23562073 aaacatacataataatatcaattaagtccatatttatctctaatcatgccacacaaatattcataatcttttagttgtcttgcattcatatttgacgtat 23562172  T
Q  801 cctttgtgagtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaa 900  Q
    |||||   || |||||||||| || ||||||||||||||||||||||| |||   |||||  | ||| | |||||    || |||| ||||||||||| |    
T  23562173 cctttaaaagaatttgtaaatcatcgatcttcgacctttccctatcattttcggttctttgtagctccgcatcaa----cccttttcctctctatctcga 23562268  T
Q  901 gtttttcactctcaatacgtgcat-atcacatgcaaac 937  Q
      |||||||||||||||||||||| ||||| |||||||    
T  23562269 ccttttcactctcaatacgtgcataatcacgtgcaaac 23562306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 23822018 - 23822085
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgtt 192  Q
    ||||||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||| ||||||||    
T  23822018 aattagttgtttctctctcttatagtcacatcaatagttataattgatgtatttttatactagttgtt 23822085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 13214701 - 13214643
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttata 183  Q
    ||||||||  ||||||||| ||||||||||| | | ||||||| |||||||||||||||    
T  13214701 aattagttgtttctctctcttatagtcacattaatagttataattgatgtatttttata 13214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 698 - 727
Target Start/End: Original strand, 32602668 - 32602697
Alignment:
Q  698 gttaaacatatataataatatcaattaagt 727  Q
    ||||||||||||||||||||||||||||||    
T  32602668 gttaaacatatataataatatcaattaagt 32602697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-103; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 705 - 1033
Target Start/End: Complemental strand, 9681091 - 9680764
Alignment:
Q  705 atatataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtatcctt 804  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||||||||||||||||||| |||||||||||    
T  9681091 atatataataatatcaattaagtccatatttatctctaatcacgccacacaaaaattcataatcttgtagttgtcttggattcatatttgatgtatcctt 9680992  T
Q  805 tgtgagtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaagttt 904  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||| |||||    || |||||||||||||||||| |||    
T  9680991 tgtgagtatttgtaaatcattgatcttcgacctttccctatcattctcaactctttgcaactcggcatcaa----ccctttttctctctatctcaatttt 9680896  T
Q  905 ttcactctcaatacgtgcat-atcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaatttgggagtagacatt 1003  Q
    ||||||||||| |||||||| ||||| | ||||||||| |||||||||  || |||||||||||||||||||||||| ||| |||||||||||||| |||    
T  9680895 ttcactctcaaaacgtgcataatcacgtacaaaccctgacattaattcatattttttgttgaagtcatctttcaaagtatcaaatttgggagtagaaatt 9680796  T
Q  1004 t-cacaggcttttc-tttcccttcttttttgc 1033  Q
    | |||| ||||||| ||||||||| |||||||    
T  9680795 tccacaagcttttcttttcccttcctttttgc 9680764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 702 - 990
Target Start/End: Complemental strand, 5188868 - 5188583
Alignment:
Q  702 aacatatataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtatc 801  Q
    |||||| |||||||||||| || ||| ||||||| |||||||||||| |||||||||| |||||||| | |||||| |||||||||||||| ||| ||||    
T  5188868 aacatacataataatatcactttagtacatatttatctctaatcacgccacacaaaaattcataatcttgtagttgccttggattcatatttgatatatc 5188769  T
Q  802 ctttgtgagtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaag 901  Q
    ||| | || ||||| ||||| ||||||||||  |||||||||||||| ||| ||  ||| || ||  |||||||    || ||||||||||||||||||     
T  5188768 cttcgagaatatttctaaatcattgatcttcatcctttccctatcattttcgaccttttgcagctttgtatcaa----ccctttttctctctatctcaac 5188673  T
Q  902 tttttcactctcaatacgtgca-tatcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaattt 990  Q
    ||||||||||||||||| ||||  ||||  || |||||||| ||||| ||| ||| ||||||| || |||| |||||||||||| |||||    
T  5188672 tttttcactctcaatacatgcacaatcatgtgtaaaccctgacattatttcaaattttttgttcaaatcatttttcaaagcatcaaattt 5188583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 30029070 - 30029129
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatat 184  Q
    ||||||||| ||||||| ||||||||||| ||| | ||||||||| ||||||||||||||    
T  30029070 aattagttatttctctcgcatatagtcacgtcaatagttataaataatgtatttttatat 30029129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 43019825 - 43019870
Alignment:
Q  138 tctctcatatagtcacatcattcgttataaatgatgtatttttata 183  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||    
T  43019825 tctctcttatagtcacatcattagttataaattgtgtatttttata 43019870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 8e-61; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 701 - 1005
Target Start/End: Complemental strand, 31072670 - 31072369
Alignment:
Q  701 aaacatatataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtat 800  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||| | |||||||| | |||||||| | |||||||||||||||||||||||||||||    
T  31072670 aaacatacataataatatcaattaagttcatatttatctctaatcatgccacacaaatattcataatcttgtagttgtcttggattcatattcgatgtat 31072571  T
Q  801 cctttgtgagtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaa 900  Q
    |||| ||||  |||||||||| ||||||||| ||||||||| ||||||  ||   ||||| || ||| |   || | |||||||||||||||||| || |    
T  31072570 ccttcgtgataatttgtaaataattgatctttgacctttccatatcattctcggttctttgcagctccg---catcgacccttttttctctctatatcga 31072474  T
Q  901 gtttttcactctcaatacgtgcat-atcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaatttgggagtaga 999  Q
     ||||||||||||||||||||||| ||||| ||||||||| | ||||| ||| ||  ||||||||||||||| |||||||| ||| ||||||| | ||||    
T  31072473 ctttttcactctcaatacgtgcataatcacgtgcaaacccggacattagttcaaactttttgttgaagtcatttttcaaagtatcaaatttggta-taga 31072375  T
Q  1000 catttc 1005  Q
    ||||||    
T  31072374 catttc 31072369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 28762214 - 28762281
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgtt 192  Q
    ||||||||  ||||||||| |||| |||||||| | ||||||| ||||||||||||||| ||||||||    
T  28762214 aattagttgtttctctctcttataatcacatcaatagttataattgatgtatttttatactagttgtt 28762281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 48259464 - 48259529
Alignment:
Q  250 aaaattaaatgttctcaaagaccgtttgagcttttattaacatgtatttgtttggtttcatgatct 315  Q
    |||| ||||| ||| ||||||  || |||||||| |||||||||||| |||||||||| |||||||    
T  48259464 aaaaataaattttcacaaagatggtctgagctttcattaacatgtatctgtttggtttaatgatct 48259529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 709 - 1000
Target Start/End: Complemental strand, 1391 - 1103
Alignment:
Q  709 ataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtatcctttgtg 808  Q
    ||||||| |||| |||||||||||||| ||||||||||||  ||||||||| |||||||| | ||||||||||||||||||||| ||||||||||| | |    
T  1391 ataataaaatcacttaagtccatatttatctctaatcacgctacacaaaaattcataatcttgtagttgtcttggattcatatttgatgtatccttcgag 1292  T
Q  809 agtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaagtttttca 908  Q
    ||||||| ||||| ||||||||||  ||||||||||||||  ||  |  | | |||||| | |||||    || |||| ||||||||||||| |||||||    
T  1291 agtatttctaaatcattgatcttcatcctttccctatcattctcggccttctgcaactctgcatcaa----cccttttcctctctatctcaactttttca 1196  T
Q  909 ctctcaatacgtgcat-atcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaatttgggagtagac 1000  Q
    || ||||| ||  ||| ||||| ||||||  ||| ||||| |||   ||||||||| | ||||| |||||||||||| ||| | |||||||||    
T  1195 ctttcaatgcgcacataatcacgtgcaaaaactgacattatttcagttcttttgttcatgtcatttttcaaagcatcaaatataggagtagac 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 2e-37; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 709 - 1005
Target Start/End: Complemental strand, 19992825 - 19992533
Alignment:
Q  709 ataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatcctttagttgtcttggattcatattcgatgtatcctttgtg 808  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||||| | |||||||| ||||||||||||| ||||||||| ||||||||||||       
T  19992825 ataataatatcaattatgtccatatttatctctaatcatgccacacaaatattcataatcttttagttgtcttgcattcatatttgatgtatccttt-aa 19992727  T
Q  809 agtatttgtaaattattgatcttcgacctttccctatcatcttcaactctttacaactcggtatcaacaacccttttttctctctatctcaagtttttca 908  Q
    |  | |||||||| || ||||||||||||||||||||||| |||   ||||| |||||| | |||||    || |||| ||||||||||| |  ||||||    
T  19992726 aaaaattgtaaatcatcgatcttcgacctttccctatcattttcggttctttgcaactctgcatcaa----cccttttcctctctatctcgaccttttca 19992631  T
Q  909 ctctcaatacgtgcat-atcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaatttgggagtagacatttc 1005  Q
    ||||||||| |||||| ||||  ||||||| | |  | || ||| ||  |||||| |||||||| |||||||| ||| ||||||| ||||||| ||||    
T  19992630 ctctcaatatgtgcataatcatgtgcaaacacggatactagttcaaactttttgtcgaagtcatatttcaaagtatcaaatttggtagtagacgtttc 19992533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 363
Target Start/End: Original strand, 789282 - 789369
Alignment:
Q  276 tgagcttttattaacatgtatttgtttggtttcatgatctagatttgatgtaagatttaaaaaagtattgcttagatgagttttacat 363  Q
    ||||||||||||||||||||| ||   |||||| ||||||  ||||||||||||||||||  |||||||| | |||||||||||||||    
T  789282 tgagcttttattaacatgtatatggcaggtttcctgatctgtatttgatgtaagatttaagtaagtattgttgagatgagttttacat 789369  T

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Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 2199276 - 2199210
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgt 191  Q
    ||||||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||| |||||||    
T  2199276 aattagttgtttctctctcttatagtcacatcaatagttataattgatgtatttttatactagttgt 2199210  T

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Target: chr7 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 889 - 999
Target Start/End: Original strand, 9213270 - 9213381
Alignment:
Q  889 tctctatctcaagtttttcactctcaatacgtgcata-tcacatgcaaaccctgccattaattctaatcttttgttgaagtcatctttcaaagcatccaa 987  Q
    ||||| |||||| ||||||||||||| |||||||| | ||||  ||||||| || ||||||||| ||| ||||||| ||||||| |||||||||||| ||    
T  9213270 tctctctctcaactttttcactctcagtacgtgcaaaatcacgcgcaaaccttgacattaattcaaattttttgttcaagtcatttttcaaagcatcaaa 9213369  T
Q  988 tttgggagtaga 999  Q
    ||| ||| ||||    
T  9213370 tttaggaataga 9213381  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 25614219 - 25614144
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgtttaataatt 200  Q
    ||||| ||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||| |||||| |||||||    
T  25614219 aattacttatttctctctattatagtcacatcattagttataaattgtgtatttttatattggttgttaaataatt 25614144  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 702 - 768
Target Start/End: Original strand, 9213088 - 9213154
Alignment:
Q  702 aacatatataataatatcaattaagtccatatttttctctaatcacgtcacacaaaaaatcataatc 768  Q
    |||||| ||||||||||||||||||| ||||||| | |||||||| | |||||||||| ||||||||    
T  9213088 aacataaataataatatcaattaagttcatatttatgtctaatcatgccacacaaaaattcataatc 9213154  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 10110900 - 10110967
Alignment:
Q  125 aattagttacttctctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgtt 192  Q
    ||||||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||| ||||||||    
T  10110900 aattagttgtttctctctcttatagtcacatcaatagttataattgatgtatttttatactagttgtt 10110967  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 29996 - 30049
Alignment:
Q  138 tctctcatatagtcacatcattcgttataaatgatgtatttttatattagttgt 191  Q
    |||||| ||||||||||||| | ||||||| ||||||||||||||| |||||||    
T  29996 tctctcttatagtcacatcaatagttataattgatgtatttttatactagttgt 30049  T

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