View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4582-Insertion-8 (Length: 298)
Name: NF4582-Insertion-8
Description: NF4582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4582-Insertion-8 |
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Alignment Details
Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 166 - 280
Target Start/End: Original strand, 38582922 - 38583036
Alignment:
| Q |
166 |
gactactttcatcatctgggaatatttgaagtcaatttcacatacaagaagctttaaaatgcttcatggtaaaaaagaatttgggtagataaggtaacta |
265 |
Q |
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| T |
38582922 |
gactactttcatcatctgggaatatttgaagtcaatttcacatacaagaagctttaaaatgcttcatggtaaaaaagaatttgggtagataaggtaacta |
38583021 |
T |
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| Q |
266 |
gcgttcatctacaag |
280 |
Q |
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| T |
38583022 |
gcgttaatctacaag |
38583036 |
T |
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Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 38582768 - 38582860
Alignment:
| Q |
10 |
tatatctacatctacaatcaatgttccattcnnnnnnnttaaaatccataatcaattttaaaagcttgccttgcggag-aaaaaatcaagatg |
101 |
Q |
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|||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
38582768 |
tatatctacatctataatcaatgttccattcaaaaaaattaaaatccataatcaattttaaaagcttgccttgcggagaaaaaaatcaagatg |
38582860 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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