View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4582_high_12 (Length: 254)
Name: NF4582_high_12
Description: NF4582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4582_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 38582766 - 38582532
Alignment:
| Q |
20 |
agttgcactaacatatgagaatcagagatatcaaaaacttatgtctgcataaggtaaggtaaatatactaagcatctgtttttggtgattgagcaatata |
119 |
Q |
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| T |
38582766 |
agttgcactaacatatgagaatcagagatatcaaaaacttatgtctgcataaggtaaggtaaatatactaagcatctgtttttggtgattgagcaatata |
38582667 |
T |
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| Q |
120 |
ttaataaaactttgacaaatcctatgtttatatatgctcccctcacactctcataacttccaaaactatatatttacaagtgatagttctaaatatatga |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38582666 |
ttaataaaactttgacaaatcctatgtttatatatgctcccctcacactctcataacttccaaaactatatatttacaagtgatagttctaaatatatga |
38582567 |
T |
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| Q |
220 |
ttaagcatcaacaagactggtgctttttcctccac |
254 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
38582566 |
ttaagcatcaacaagactggtgctttttcctccac |
38582532 |
T |
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