View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4582_low_19 (Length: 236)

Name: NF4582_low_19
Description: NF4582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4582_low_19
NF4582_low_19
[»] chr1 (49 HSPs)
chr1 (1-143)||(48686819-48686961)
chr1 (160-215)||(24326029-24326084)
chr1 (160-217)||(13358938-13358995)
chr1 (160-217)||(16226533-16226590)
chr1 (160-217)||(20291821-20291878)
chr1 (160-216)||(9459294-9459350)
chr1 (160-216)||(9463121-9463177)
chr1 (160-216)||(13762201-13762257)
chr1 (160-216)||(28842859-28842915)
chr1 (160-216)||(51750404-51750460)
chr1 (144-216)||(51752734-51752805)
chr1 (144-217)||(47177727-47177801)
chr1 (160-217)||(16231928-16231985)
chr1 (160-217)||(20302806-20302863)
chr1 (137-216)||(39932440-39932521)
chr1 (160-216)||(13447133-13447189)
chr1 (160-216)||(15294694-15294750)
chr1 (160-216)||(23786205-23786261)
chr1 (160-216)||(23816250-23816306)
chr1 (160-216)||(51757900-51757956)
chr1 (160-215)||(47906632-47906687)
chr1 (160-217)||(2949096-2949154)
chr1 (163-217)||(10399690-10399744)
chr1 (144-217)||(47180078-47180152)
chr1 (160-217)||(2617882-2617939)
chr1 (160-217)||(31490271-31490328)
chr1 (160-216)||(46431565-46431621)
chr1 (161-216)||(50248435-50248491)
chr1 (161-216)||(31735383-31735438)
chr1 (160-217)||(15823909-15823967)
chr1 (144-216)||(38925328-38925402)
chr1 (160-217)||(50307406-50307464)
chr1 (160-216)||(25251138-25251195)
chr1 (160-216)||(50078653-50078710)
chr1 (160-210)||(18839954-18840005)
chr1 (144-217)||(3579431-3579505)
chr1 (160-217)||(6114970-6115028)
chr1 (144-216)||(17185979-17186053)
chr1 (160-217)||(27336801-27336859)
chr1 (160-205)||(39462893-39462939)
chr1 (160-216)||(6995557-6995614)
chr1 (160-216)||(9240951-9241008)
chr1 (144-216)||(14183455-14183528)
chr1 (160-216)||(16429313-16429370)
chr1 (160-216)||(25248415-25248472)
chr1 (160-216)||(2510202-2510258)
chr1 (165-216)||(13215444-13215496)
chr1 (164-207)||(17324500-17324544)
chr1 (172-216)||(28841044-28841088)
[»] chr8 (31 HSPs)
chr8 (142-216)||(44721264-44721339)
chr8 (143-216)||(43082394-43082468)
chr8 (143-216)||(15809639-15809712)
chr8 (144-216)||(43080023-43080096)
chr8 (144-216)||(4424440-4424512)
chr8 (160-216)||(28283079-28283135)
chr8 (160-217)||(18811128-18811185)
chr8 (160-217)||(22684510-22684567)
chr8 (160-217)||(32339730-32339787)
chr8 (160-216)||(24873056-24873112)
chr8 (143-217)||(33541254-33541330)
chr8 (160-216)||(43530536-43530592)
chr8 (144-216)||(2467979-2468052)
chr8 (160-216)||(3874414-3874470)
chr8 (160-216)||(3883453-3883509)
chr8 (160-216)||(28251428-28251484)
chr8 (142-216)||(27829717-27829792)
chr8 (160-216)||(13858351-13858408)
chr8 (160-216)||(14808177-14808234)
chr8 (160-216)||(15185581-15185638)
chr8 (160-217)||(18813302-18813359)
chr8 (160-216)||(21482724-21482781)
chr8 (160-216)||(27827406-27827463)
chr8 (165-217)||(35872323-35872376)
chr8 (146-216)||(31162626-31162697)
chr8 (160-216)||(15073128-15073185)
chr8 (160-216)||(21480916-21480973)
chr8 (165-217)||(25952935-25952988)
chr8 (160-216)||(30480365-30480422)
chr8 (144-215)||(3005486-3005558)
chr8 (165-216)||(27106769-27106821)
[»] chr6 (32 HSPs)
chr6 (142-216)||(4816069-4816144)
chr6 (144-216)||(20915197-20915270)
chr6 (143-217)||(33311525-33311599)
chr6 (160-217)||(2628743-2628800)
chr6 (160-217)||(5273073-5273130)
chr6 (144-216)||(26932403-26932476)
chr6 (144-217)||(33309256-33309329)
chr6 (160-216)||(8717212-8717268)
chr6 (160-216)||(18322493-18322549)
chr6 (160-216)||(29754566-29754622)
chr6 (160-216)||(30967601-30967657)
chr6 (161-216)||(19704422-19704477)
chr6 (160-217)||(12195371-12195428)
chr6 (160-217)||(14458624-14458681)
chr6 (163-216)||(14507037-14507090)
chr6 (160-217)||(26065381-26065438)
chr6 (160-217)||(26085350-26085407)
chr6 (160-216)||(11982889-11982945)
chr6 (160-216)||(26065978-26066034)
chr6 (160-216)||(26068252-26068308)
chr6 (144-216)||(28241163-28241235)
chr6 (160-217)||(1230106-1230163)
chr6 (160-214)||(13057587-13057642)
chr6 (142-185)||(17038524-17038567)
chr6 (160-215)||(30034463-30034517)
chr6 (160-216)||(15346739-15346796)
chr6 (160-216)||(15367424-15367481)
chr6 (160-216)||(15541007-15541064)
chr6 (160-217)||(25480272-25480329)
chr6 (160-216)||(30728686-30728743)
chr6 (165-216)||(3394763-3394815)
chr6 (165-216)||(3629733-3629785)
[»] chr3 (58 HSPs)
chr3 (142-216)||(10191150-10191224)
chr3 (142-216)||(10084227-10084301)
chr3 (144-216)||(456253-456325)
chr3 (144-216)||(458630-458702)
chr3 (144-216)||(10955867-10955939)
chr3 (160-217)||(747103-747160)
chr3 (160-217)||(11168446-11168503)
chr3 (160-216)||(5191996-5192052)
chr3 (144-216)||(10958163-10958235)
chr3 (160-216)||(28412887-28412943)
chr3 (161-217)||(38890385-38890441)
chr3 (160-216)||(41849398-41849454)
chr3 (160-216)||(53893910-53893966)
chr3 (160-215)||(9604464-9604519)
chr3 (160-217)||(5522482-5522539)
chr3 (160-217)||(6065650-6065707)
chr3 (160-217)||(11170715-11170772)
chr3 (160-217)||(22114159-22114216)
chr3 (160-216)||(10621383-10621439)
chr3 (160-216)||(25389252-25389308)
chr3 (160-215)||(5886544-5886599)
chr3 (160-215)||(5900017-5900072)
chr3 (161-216)||(43226422-43226477)
chr3 (161-216)||(43228632-43228687)
chr3 (160-217)||(18163005-18163063)
chr3 (160-217)||(28101865-28101923)
chr3 (165-216)||(3315026-3315078)
chr3 (160-216)||(50494344-50494400)
chr3 (160-217)||(18099027-18099085)
chr3 (160-217)||(28761304-28761362)
chr3 (160-217)||(32219427-32219485)
chr3 (160-206)||(38210726-38210772)
chr3 (160-216)||(1321824-1321881)
chr3 (160-217)||(6063300-6063357)
chr3 (160-216)||(27635515-27635572)
chr3 (160-216)||(42990644-42990701)
chr3 (160-215)||(561640-561696)
chr3 (164-207)||(880106-880150)
chr3 (164-216)||(3859856-3859908)
chr3 (160-207)||(15781228-15781276)
chr3 (160-216)||(25533770-25533825)
chr3 (160-216)||(31151681-31151737)
chr3 (160-212)||(36957651-36957703)
chr3 (166-217)||(7606465-7606516)
chr3 (160-217)||(4666853-4666911)
chr3 (160-217)||(18096757-18096815)
chr3 (144-214)||(25635718-25635788)
chr3 (164-216)||(1313747-1313800)
chr3 (163-204)||(4308143-4308184)
chr3 (164-216)||(5926630-5926683)
chr3 (165-217)||(24980051-24980104)
chr3 (163-216)||(27101043-27101096)
chr3 (160-216)||(36012169-36012226)
chr3 (160-216)||(45883283-45883340)
chr3 (160-216)||(53915355-53915412)
chr3 (160-216)||(53917523-53917580)
chr3 (180-216)||(26720892-26720928)
chr3 (160-215)||(51674626-51674682)
[»] chr4 (62 HSPs)
chr4 (144-216)||(22132229-22132302)
chr4 (141-217)||(2484712-2484788)
chr4 (144-215)||(18847572-18847644)
chr4 (144-216)||(22134457-22134530)
chr4 (144-216)||(5198823-5198895)
chr4 (160-216)||(9176331-9176387)
chr4 (143-216)||(22044230-22044305)
chr4 (160-216)||(22046544-22046600)
chr4 (160-216)||(24348620-24348676)
chr4 (142-216)||(5635316-5635390)
chr4 (160-216)||(6765261-6765318)
chr4 (144-216)||(11006094-11006167)
chr4 (144-216)||(11008408-11008481)
chr4 (143-216)||(31849439-31849512)
chr4 (160-217)||(47868820-47868877)
chr4 (160-216)||(53405552-53405609)
chr4 (160-216)||(8631276-8631332)
chr4 (160-216)||(9174003-9174059)
chr4 (160-216)||(11435374-11435430)
chr4 (160-216)||(22780229-22780285)
chr4 (160-216)||(22782594-22782650)
chr4 (160-216)||(51015664-51015720)
chr4 (160-215)||(3937143-3937198)
chr4 (160-207)||(17662108-17662155)
chr4 (162-217)||(26085836-26085891)
chr4 (143-216)||(7941742-7941815)
chr4 (160-216)||(14787291-14787348)
chr4 (160-216)||(14789290-14789347)
chr4 (160-216)||(22802594-22802651)
chr4 (160-216)||(37312941-37312998)
chr4 (160-216)||(38928041-38928098)
chr4 (163-216)||(40637492-40637545)
chr4 (160-216)||(16931648-16931704)
chr4 (160-216)||(18709021-18709077)
chr4 (160-216)||(38409623-38409679)
chr4 (161-212)||(14633741-14633792)
chr4 (161-216)||(47210655-47210710)
chr4 (160-217)||(3824466-3824524)
chr4 (160-217)||(36919446-36919504)
chr4 (160-217)||(36921355-36921413)
chr4 (160-216)||(18409210-18409267)
chr4 (165-217)||(24446524-24446577)
chr4 (160-216)||(37089229-37089286)
chr4 (160-216)||(41997901-41997958)
chr4 (160-216)||(49088970-49089027)
chr4 (160-216)||(11437782-11437838)
chr4 (165-216)||(38270016-38270068)
chr4 (160-216)||(44599697-44599752)
chr4 (177-217)||(47275137-47275177)
chr4 (165-216)||(9148654-9148705)
chr4 (160-214)||(19096298-19096353)
chr4 (165-214)||(619320-619370)
chr4 (160-217)||(2891705-2891763)
chr4 (144-217)||(19323103-19323177)
chr4 (144-216)||(5664649-5664722)
chr4 (144-216)||(8756103-8756176)
chr4 (160-216)||(16453722-16453779)
chr4 (160-216)||(16455640-16455697)
chr4 (160-216)||(22800722-22800779)
chr4 (163-204)||(24889224-24889265)
chr4 (161-217)||(33415352-33415409)
chr4 (160-216)||(47563173-47563230)
[»] chr5 (41 HSPs)
chr5 (144-217)||(10750064-10750137)
chr5 (144-217)||(10757540-10757613)
chr5 (144-216)||(31543099-31543172)
chr5 (144-217)||(34479259-34479332)
chr5 (160-217)||(34476910-34476967)
chr5 (160-216)||(4410386-4410442)
chr5 (160-216)||(38959989-38960045)
chr5 (162-217)||(25921333-25921388)
chr5 (144-216)||(2175266-2175341)
chr5 (160-217)||(3372994-3373051)
chr5 (160-217)||(15354431-15354488)
chr5 (160-217)||(15356707-15356764)
chr5 (143-216)||(21684293-21684366)
chr5 (160-217)||(23665410-23665467)
chr5 (160-217)||(23741714-23741771)
chr5 (160-217)||(23793120-23793177)
chr5 (143-216)||(38882453-38882526)
chr5 (148-207)||(31545457-31545517)
chr5 (160-216)||(39798395-39798451)
chr5 (160-217)||(10528955-10529012)
chr5 (163-216)||(25804389-25804442)
chr5 (160-216)||(27912901-27912958)
chr5 (160-216)||(4236993-4237049)
chr5 (160-216)||(15552611-15552667)
chr5 (160-216)||(31179230-31179286)
chr5 (160-217)||(36402187-36402245)
chr5 (160-216)||(10474185-10474242)
chr5 (144-216)||(10587180-10587252)
chr5 (160-216)||(18469374-18469431)
chr5 (165-216)||(21948394-21948446)
chr5 (160-217)||(27910797-27910855)
chr5 (140-216)||(658200-658277)
chr5 (160-216)||(2724253-2724310)
chr5 (160-216)||(17818352-17818409)
chr5 (160-216)||(18467049-18467106)
chr5 (160-216)||(21289119-21289176)
chr5 (160-216)||(34530576-34530633)
chr5 (160-216)||(36208933-36208990)
chr5 (160-216)||(39854847-39854904)
chr5 (160-216)||(40221889-40221946)
chr5 (160-216)||(41585597-41585654)
[»] chr2 (26 HSPs)
chr2 (144-216)||(35215433-35215506)
chr2 (144-216)||(19504178-19504250)
chr2 (160-216)||(36558738-36558794)
chr2 (160-217)||(23452094-23452151)
chr2 (144-216)||(35217810-35217883)
chr2 (144-217)||(42453817-42453890)
chr2 (164-216)||(13909907-13909959)
chr2 (160-216)||(19501859-19501915)
chr2 (160-216)||(36560998-36561054)
chr2 (140-216)||(24162059-24162137)
chr2 (161-216)||(45279860-45279915)
chr2 (143-216)||(28459037-28459111)
chr2 (160-216)||(27105138-27105195)
chr2 (160-216)||(45332037-45332093)
chr2 (160-216)||(17849453-17849510)
chr2 (160-216)||(19007976-19008033)
chr2 (160-216)||(37962808-37962865)
chr2 (160-220)||(43623440-43623501)
chr2 (177-216)||(5375225-5375264)
chr2 (160-217)||(45238859-45238917)
chr2 (160-216)||(22874445-22874502)
chr2 (165-217)||(34979456-34979509)
chr2 (177-217)||(17848774-17848814)
chr2 (165-220)||(21520556-21520612)
chr2 (165-216)||(22287203-22287255)
chr2 (165-216)||(42923373-42923425)
[»] scaffold0891 (1 HSPs)
scaffold0891 (144-207)||(4518-4582)
[»] scaffold0131 (1 HSPs)
scaffold0131 (144-216)||(14231-14303)
[»] chr7 (47 HSPs)
chr7 (160-217)||(7349135-7349192)
chr7 (160-216)||(7351509-7351565)
chr7 (160-216)||(7471838-7471894)
chr7 (160-216)||(9027051-9027107)
chr7 (160-216)||(28487928-28487984)
chr7 (160-216)||(38394361-38394417)
chr7 (161-216)||(36004-36059)
chr7 (161-216)||(1850356-1850411)
chr7 (143-216)||(2935644-2935717)
chr7 (144-216)||(20299835-20299908)
chr7 (160-217)||(40550203-40550260)
chr7 (160-216)||(1046775-1046831)
chr7 (160-216)||(1606754-1606810)
chr7 (160-216)||(11759502-11759558)
chr7 (160-216)||(20297737-20297793)
chr7 (160-216)||(25542903-25542959)
chr7 (160-216)||(28485940-28485996)
chr7 (160-216)||(38397014-38397070)
chr7 (160-216)||(40836601-40836657)
chr7 (144-216)||(40946705-40946777)
chr7 (160-216)||(48458028-48458084)
chr7 (161-216)||(44939-44994)
chr7 (161-216)||(3878954-3879009)
chr7 (160-217)||(42223525-42223583)
chr7 (160-217)||(20626407-20626464)
chr7 (160-217)||(20630298-20630355)
chr7 (160-217)||(20642717-20642774)
chr7 (160-217)||(22137453-22137510)
chr7 (160-217)||(40552480-40552537)
chr7 (143-216)||(43253357-43253430)
chr7 (164-216)||(1049151-1049203)
chr7 (160-207)||(1502832-1502879)
chr7 (160-217)||(7092070-7092128)
chr7 (161-216)||(42330864-42330920)
chr7 (161-216)||(3036099-3036154)
chr7 (165-216)||(18345916-18345967)
chr7 (177-216)||(39145866-39145905)
chr7 (160-217)||(7094317-7094375)
chr7 (168-217)||(21990520-21990570)
chr7 (160-217)||(31434910-31434968)
chr7 (160-216)||(4295798-4295855)
chr7 (160-216)||(11355630-11355687)
chr7 (160-216)||(24748960-24749017)
chr7 (160-193)||(31153708-31153741)
chr7 (160-216)||(7469881-7469936)
chr7 (177-217)||(22108443-22108483)
chr7 (165-216)||(44724948-44725000)
[»] scaffold0267 (1 HSPs)
scaffold0267 (161-217)||(399-455)
[»] scaffold0250 (1 HSPs)
scaffold0250 (147-215)||(3254-3322)
[»] scaffold0472 (1 HSPs)
scaffold0472 (160-217)||(6572-6629)
[»] scaffold0140 (2 HSPs)
scaffold0140 (160-217)||(22490-22547)
scaffold0140 (160-217)||(24765-24822)
[»] scaffold0068 (1 HSPs)
scaffold0068 (143-216)||(29544-29617)
[»] scaffold0370 (1 HSPs)
scaffold0370 (160-216)||(1310-1366)
[»] scaffold0127 (1 HSPs)
scaffold0127 (160-216)||(12732-12788)
[»] scaffold0038 (1 HSPs)
scaffold0038 (144-216)||(41325-41397)
[»] scaffold0025 (1 HSPs)
scaffold0025 (142-216)||(69131-69206)
[»] scaffold0005 (3 HSPs)
scaffold0005 (160-216)||(50383-50440)
scaffold0005 (160-216)||(52382-52439)
scaffold0005 (161-212)||(183500-183551)
[»] scaffold1674 (1 HSPs)
scaffold1674 (160-216)||(1309-1365)
[»] scaffold0154 (1 HSPs)
scaffold0154 (163-216)||(11335-11388)
[»] scaffold1899 (1 HSPs)
scaffold1899 (160-204)||(1-45)
[»] scaffold0339 (1 HSPs)
scaffold0339 (177-217)||(4362-4402)
[»] scaffold0031 (1 HSPs)
scaffold0031 (160-217)||(79556-79614)
[»] scaffold0011 (1 HSPs)
scaffold0011 (160-216)||(35965-36022)
[»] scaffold0256 (1 HSPs)
scaffold0256 (144-192)||(16608-16656)


Alignment Details
Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 48686819 - 48686961
Alignment:
Q  1 gtcacaaattcattacatgcagcacatctatcttgaatactgatgacattttgctatatagtcagtcaatagggttatttgcgttgcatgaactaaatga 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48686819 gtcacaaattcattgcatgcagcacatctatcttgaatactgatgacattttgctatatagtcagtcaatagggttacttgcgttgcatgaactaaatga 48686918  T
Q  101 atttaactataatctacgcactctttttgtctcttgtggatac 143  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  48686919 atttaactataatctacgcactccttttgtctcttgtggatac 48686961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 24326084 - 24326029
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  24326084 aaaatcacaccaataacaacttgatgtgtggagtaagggataatcaagcaaccaaa 24326029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 13358995 - 13358938
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  13358995 aaaatcacaccaataacaacttgatgtgtggagtaagggatagtcaagcaaccaaaat 13358938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 16226590 - 16226533
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  16226590 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 16226533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 20291878 - 20291821
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  20291878 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagtaaccaaaat 20291821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9459294 - 9459350
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  9459294 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 9459350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9463121 - 9463177
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  9463121 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 9463177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 13762257 - 13762201
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13762257 aaaatcacaccaataacaacttgatgtgtggagaaagggataatcaagcaaccaaaa 13762201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 28842915 - 28842859
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  28842915 aaaatcacactaataacaacttgatgtgtggagtaagggataatcaagcaaccaaaa 28842859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 51750460 - 51750404
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  51750460 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 51750404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 51752805 - 51752734
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  51752805 tgttgtgaattcgatgaaaatcacaccaataataactt-atgtgtggagcaagggataatcaagcaaccaaaa 51752734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 47177801 - 47177727
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  47177801 tgttgtgaattcgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 47177727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 16231985 - 16231928
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| || ||||||||||| |||||||||    
T  16231985 aaaatcacaccaataacaacttgatgtgtggagcaacggataatcaagcaaccaaaat 16231928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 20302863 - 20302806
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||    
T  20302863 aaaatcacaccaataacaacttgatgtctggagcaagagataatcaagtaaccaaaat 20302806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 39932521 - 39932440
Alignment:
Q  137 tggatactgttgtgaatctgatcaaaa-tcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||  ||| |||| |||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  39932521 tggatactgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 39932440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 13447133 - 13447189
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  13447133 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 13447189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 15294694 - 15294750
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  15294694 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 15294750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 23786261 - 23786205
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  23786261 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 23786205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 23816306 - 23816250
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  23816306 aaaatcacaccaataacaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 23816250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 51757956 - 51757900
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  51757956 aaaatgacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 51757900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 47906687 - 47906632
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  47906687 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaa 47906632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 2949096 - 2949154
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||    
T  2949096 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaat 2949154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 10399690 - 10399744
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||    
T  10399690 atcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaat 10399744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 47180152 - 47180078
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  |||||||| |||||||||||| |||||||||||||||| |||||||||| ||| || ||||||    
T  47180152 tgttgtgaattcgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaatcaaaat 47180078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 2617939 - 2617882
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||| ||||||||||| ||||||||||||| || |||||||||||||| |||||||||    
T  2617939 aaaaccacaccaataacaacttgatgtgtgaagcaagggataatcaagcaaccaaaat 2617882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 31490328 - 31490271
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||  |||||||||||||||| ||| |||||||||| |||||||||    
T  31490328 aaaatcacaccaatacaaacttgatgtgtggagcaagagataatcaagcaaccaaaat 31490271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 46431565 - 46431621
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||| ||||| ||| |||||||||| ||||||||    
T  46431565 aaaatcacaccaataacaacttgatgtttggagcaagagataatcaagcaaccaaaa 46431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 50248435 - 50248491
Alignment:
Q  161 aaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| || || |||||||||||||||||||||||||| ||||||||    
T  50248435 aaatcacaccaataacaaatttgatgtgtggagtaagggataatcaagcaaccaaaa 50248491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 31735383 - 31735438
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| |||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  31735383 aaattacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 31735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 15823967 - 15823909
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| | |||||||||    
T  15823967 aaaatcacaccaataacaaacttgatgtgtggagtaaggggtaatcaggcaaccaaaat 15823909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 38925328 - 38925402
Alignment:
Q  144 tgttgtgaatctgatca-aaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| |||| | ||| |||||||||||||| |||||||||||||||||| |||||||| | ||||||||    
T  38925328 tgttgtgaatttgatgagaaaacacaccaataataaacttgatgtgtggagtaagtgataatcaggcaaccaaaa 38925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 50307406 - 50307464
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||| | |||||||||    
T  50307406 aaaatcacaccaataataaacttgatgtctggagcaagggataatcaggcaaccaaaat 50307464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 25251138 - 25251195
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  25251138 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 25251195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 50078653 - 50078710
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||| ||||||||    
T  50078653 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 50078710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 18840005 - 18839954
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaa 210  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||||||    
T  18840005 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagtaa 18839954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 3579431 - 3579505
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  ||| |||| ||||||||||| || |||||||||||||| ||| |||||||| | |||||||||    
T  3579431 tgttgtgaattcgatgaaaaacacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaat 3579505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 6114970 - 6115028
Alignment:
Q  160 aaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||  ||||| ||||||||||||||| ||| |||||||||| |||||||||    
T  6114970 aaaatcacaccggtaatatacttgatgtgtggagaaagtgataatcaagcaaccaaaat 6115028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 17185979 - 17186053
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataat-aacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| |||| |||| ||||||||||||| |||||||| ||||||| ||| |||| ||||| ||||||||    
T  17185979 tgttgtgaatttgatgaaaaatcacaccaataataaacttgatatgtggagcaagtgatagtcaagcaaccaaaa 17186053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 27336801 - 27336859
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||| |||||| || |||||||||||||| |||||||||||| | |||||||||    
T  27336801 aaaatcacatcaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat 27336859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 39462939 - 39462893
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatca 205  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||    
T  39462939 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatca 39462893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 6995557 - 6995614
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| || |||||    
T  6995557 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaatcaaaa 6995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9240951 - 9241008
Alignment:
Q  160 aaaatcacaccaataa-taacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||  ||||||| |||||||| ||| |||||||||| ||||||||    
T  9240951 aaaatcacaccaataacaaacttgaagtgtggagcaagtgataatcaagcaaccaaaa 9241008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 14183455 - 14183528
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| | |||||||||||| || |||  ||||||||| ||||||||    
T  14183455 tgttgtgaattcgataaaaatcacaccaataaaatacttgatgtgtgaagcaagtaataatcaagcaaccaaaa 14183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 16429370 - 16429313
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||| | ||||||||    
T  16429370 aaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa 16429313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 25248415 - 25248472
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||| |||||| || ||||||||||||||||||| ||| ||||| ||||||||    
T  25248415 aaaatcacaacaataacaaacttgatgtgtggagtaaggaatagtcaagcaaccaaaa 25248472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 2510202 - 2510258
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||| |||| || ||| |||||||||| ||| ||||    
T  2510202 aaaatcacaccaataacaacttgatatgtgaagcaagagataatcaagcaacgaaaa 2510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 13215496 - 13215444
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||| |||||||||||||| |||||||| ||||  ||||||||    
T  13215496 cacaccaataataaacttgatgtgtggagcaagggatagtcaaacaaccaaaa 13215444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 17324500 - 17324544
Alignment:
Q  164 tcacaccaataataa-cttgatgtgtggagtaagggataatcaag 207  Q
    |||||||||||| || ||||||||||||||||||||||| |||||    
T  17324500 tcacaccaataacaaacttgatgtgtggagtaagggatagtcaag 17324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 28841088 - 28841044
Alignment:
Q  172 ataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||| |||||| |||||||||||||| ||||||||    
T  28841088 ataacaacttgatgagtggagcaagggataatcaagcaaccaaaa 28841044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 44721339 - 44721264
Alignment:
Q  142 actgttgtgaatctgatcaa-aatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  44721339 actgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagtaagggataatcaagcaaccaaaa 44721264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 43082468 - 43082394
Alignment:
Q  143 ctgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  43082468 ctgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 43082394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 15809712 - 15809639
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  15809712 ctgttgcgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 15809639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 43080096 - 43080023
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| || ||||||| ||| ||||||||    
T  43080096 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagcaatggataattaagcaaccaaaa 43080023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 4424512 - 4424440
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||    
T  4424512 tgttgtgaattcgatgaaaatcacaccaataacaacttggtgtgtggagcaagggataatcaagcaaccaaaa 4424440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 28283079 - 28283135
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  28283079 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 28283135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 18811185 - 18811128
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||    
T  18811185 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaat 18811128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 22684510 - 22684567
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| | |||||||||    
T  22684510 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaggcaaccaaaat 22684567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 32339787 - 32339730
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||    
T  32339787 aaaatcacaccaataacaacttgatgtgtggggcaagggataatcaagcaaccaaaat 32339730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 24873056 - 24873112
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  24873056 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 24873112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 33541254 - 33541330
Alignment:
Q  143 ctgttgtgaatctgatcaaaa-tcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||  |||||||| |||||||||||| || ||||||||||||||||||||||||||||| || ||||||    
T  33541254 ctgttgtgaattcgatcaaaaatcacaccaataacaaacttgatgtgtggagtaagggataatcaagcaatcaaaat 33541330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 43530592 - 43530536
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  43530592 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 43530536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 2467979 - 2468052
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| ||||||||||||||||||| |||||||||||||| ||| |||| ||||| ||||||||    
T  2467979 tgttgtgaattcgatgaaaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagcaaccaaaa 2468052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 3874470 - 3874414
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| ||||| |||| ||||||||    
T  3874470 aaaatcacaccaataacaacttgatgtgtggagcaagagataaccaagcaaccaaaa 3874414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 3883453 - 3883509
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||| |||||| |||||||||||||||| || ||||||||||| ||||||||    
T  3883453 aaaatcacatcaataacaacttgatgtgtggagcaaaggataatcaagcaaccaaaa 3883509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 28251428 - 28251484
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||| | ||||||||    
T  28251428 aaaatcacaccaataacaacttgatgtgtggagcaaggaataatcaggcaaccaaaa 28251484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 27829792 - 27829717
Alignment:
Q  142 actgttgtgaatctgatcaaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| ||||  ||| |||||||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  27829792 actgttgcgaattcgatgaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 27829717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 13858351 - 13858408
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||||| ||||||||    
T  13858351 aaaatcacaccaataagaaacttgatgtgtggagcaagtgataatcaagcaaccaaaa 13858408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 14808234 - 14808177
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| || ||||||||||| ||||||||    
T  14808234 aaaatcacaccaataacaaacttgatgtgtggagcaacggataatcaagcaaccaaaa 14808177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 15185581 - 15185638
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||| |||||| || ||||||||||||||||||||||| ||||| ||||||||    
T  15185581 aaaatcacatcaataacaaacttgatgtgtggagtaagggatagtcaagcaaccaaaa 15185638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 18813359 - 18813302
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||| ||| ||| ||| |||||||||| |||||||||    
T  18813359 aaaatcacaccaataacaacttgatatgtagagcaagagataatcaagcaaccaaaat 18813302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 21482781 - 21482724
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||| ||| ||||||||    
T  21482781 aaaatcacaccaataataaacttgatgtgtggagcaagtgataatgaagcaaccaaaa 21482724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 27827463 - 27827406
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  27827463 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 27827406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 35872323 - 35872376
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||    
T  35872323 cacaccaataacaaacttgatgtgtgaagtaagggataatcaagcaaccaaaat 35872376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 31162697 - 31162626
Alignment:
Q  146 ttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||| | || |||||||||||||||| | ||||||||||||||| |||  ||||| ||||||||||||    
T  31162697 ttgtgaatttcatgaaaatcacaccaataaaatacttgatgtgtggagcaagtaataattaagtaaccaaaa 31162626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 15073185 - 15073128
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| || |||||    
T  15073185 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaatcaaaa 15073128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 21480973 - 21480916
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||| ||||||||||||| |||||||||||||||||| || ||||||  ||||||||    
T  21480973 aaaataacaccaataataaacttgatgtgtggagtaagtgacaatcaaacaaccaaaa 21480916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 25952988 - 25952935
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| || |||||||||||||| ||| |||||||||| |||||||||    
T  25952988 cacaccaataacaaacttgatgtgtggagaaagtgataatcaagcaaccaaaat 25952935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 30480365 - 30480422
Alignment:
Q  160 aaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||| |||||||||| || || |||||||||||||||| ||||||||| ||||||||    
T  30480365 aaaatgacaccaataacaaatttgatgtgtggagtaaggaataatcaagcaaccaaaa 30480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 3005486 - 3005558
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    ||||||||||  ||| |||||||||||||||| | ||||||||||||||| |||  ||||||||  |||||||    
T  3005486 tgttgtgaattcgatgaaaatcacaccaataaaatacttgatgtgtggagcaagtaataatcaaacaaccaaa 3005558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 27106769 - 27106821
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  27106769 cacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 27106821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 4816069 - 4816144
Alignment:
Q  142 actgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  4816069 actgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 4816144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 20915197 - 20915270
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||| ||||||||    
T  20915197 tgttgtgaatctgatcaaaaatcacaccaataataacttgatgtgtggggcaaggggtaatcaagcaaccaaaa 20915270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 33311599 - 33311525
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  33311599 ctgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 33311525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 2628743 - 2628800
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  2628743 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 2628800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 5273073 - 5273130
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  5273073 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 5273130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 26932403 - 26932476
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| |||| |||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  26932403 tgttgtgaatttgatgaaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 26932476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 33309329 - 33309256
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  33309329 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 33309256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 8717212 - 8717268
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  8717212 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 8717268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 18322549 - 18322493
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  18322549 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 18322493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 29754566 - 29754622
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  29754566 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 29754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 30967657 - 30967601
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  30967657 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagtaaccaaaa 30967601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 19704422 - 19704477
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  19704422 aaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 19704477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 12195371 - 12195428
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  12195371 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 12195428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 14458624 - 14458681
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||||    
T  14458624 aaaatcacaccaataatagcttgatgtgtggagtaatggataatcaggcaaccaaaat 14458681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 14507037 - 14507090
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  14507037 atcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 14507090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 26065438 - 26065381
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  26065438 aaaatcacaccaataacaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 26065381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 26085407 - 26085350
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  26085407 aaaatcacaccaataacaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 26085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 11982889 - 11982945
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  11982889 aaaatcacaccaataacaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 11982945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 26065978 - 26066034
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  26065978 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 26066034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 26068252 - 26068308
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  26068252 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 26068308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 28241163 - 28241235
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| ||| |||||||||| || |||||    
T  28241163 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaatcaaaa 28241235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 1230106 - 1230163
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||||| |||||||||    
T  1230106 aaaatcacaccaataacaacttgatgtgtggatcaagagataatcaagcaaccaaaat 1230163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 13057642 - 13057587
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaa 214  Q
    |||||||||||||||| || |||||||||||||| || ||||||||||| ||||||    
T  13057642 aaaatcacaccaataacaaacttgatgtgtggagcaaaggataatcaagcaaccaa 13057587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 17038567 - 17038524
Alignment:
Q  142 actgttgtgaatctgatcaaaatcacaccaataataacttgatg 185  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  17038567 actgttgtgaatttgatgaaaatcacaccaataaaaacttgatg 17038524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 30034463 - 30034517
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| |||||||||| ||||| || ||||||||||| |||||||    
T  30034463 aaaatcacaccaataacaacttgatgtatggagcaa-ggataatcaagcaaccaaa 30034517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 15346796 - 15346739
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||  ||| |||||||||| ||||||||    
T  15346796 aaaatcacaccaataacaaacttgatgtgtggaacaagtgataatcaagcaaccaaaa 15346739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 15367481 - 15367424
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| | | |||||||||| ||||||||    
T  15367481 aaaatcacaccaataacaaacttgatgtgtggagcatgtgataatcaagcaaccaaaa 15367424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 15541007 - 15541064
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| |||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  15541007 aaaatcaaaccaataacaaacttgatgtgtggagcaagggatagtcaagaaaccaaaa 15541064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 25480329 - 25480272
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||  | ||||||||| |||||||||||| || || |||||||||    
T  25480329 aaaatcacaccaataaatatttgatgtgtagagtaagggatagtcgagcaaccaaaat 25480272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 30728686 - 30728743
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||  ||||||||    
T  30728686 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaaacaaccaaaa 30728743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 3394815 - 3394763
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| || ||||||||||| ||||||||    
T  3394815 cacaccaataaaaatcttgatgtgtggagaaatggataatcaagcaaccaaaa 3394763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 3629733 - 3629785
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| || ||||||||||| ||||||||    
T  3629733 cacaccaataacaaacttgatgtgtggagcaaaggataatcaagcaaccaaaa 3629785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 10191150 - 10191224
Alignment:
Q  142 actgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  10191150 actgttgcgaatctgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 10191224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 10084227 - 10084301
Alignment:
Q  142 actgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  10084227 actgttgcgaatccgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 10084301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 456325 - 456253
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  456325 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 456253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 458702 - 458630
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  458702 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 10955867 - 10955939
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  10955867 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 10955939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 747160 - 747103
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  747160 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 747103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 11168503 - 11168446
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  11168503 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 11168446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 5192052 - 5191996
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  5192052 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 5191996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 10958163 - 10958235
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  10958163 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 10958235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 28412887 - 28412943
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  28412887 aaaaacacaccaataacaacttgatgtgtggagcaagggataatcaagtaaccaaaa 28412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 38890441 - 38890385
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  38890441 aaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 38890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 41849454 - 41849398
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  41849454 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 41849398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 53893910 - 53893966
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  53893910 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 53893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 9604464 - 9604519
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  9604464 aaaatcacaccaataacaacttgatgtgtggagcaaggaataatcaagtaaccaaa 9604519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 5522482 - 5522539
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  5522482 aaaatcacaccaataacaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 5522539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 6065650 - 6065707
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  6065650 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 6065707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 11170772 - 11170715
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  11170772 aaaatcacattaataacaacttgatgtgtggagtaagggataatcaagcaaccaaaat 11170715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 22114159 - 22114216
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||| |||||||||    
T  22114159 aaaatcacaccaatagcaacttgatgtgtggagcaagggataatcaagcaaccaaaat 22114216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 10621383 - 10621439
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  10621383 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 10621439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 25389308 - 25389252
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  25389308 aaaatcataccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 25389252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 5886599 - 5886544
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||    
T  5886599 aaaatcacaccaataacaacttgatgtgtggagcaagggataaacaagcaaccaaa 5886544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 5900072 - 5900017
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||    
T  5900072 aaaatcacaccaataacaacttgatgtgtggagcaagggataaacaagcaaccaaa 5900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 43226477 - 43226422
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  43226477 aaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 43226422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 43228687 - 43228632
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  43228687 aaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 43228632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 18163063 - 18163005
Alignment:
Q  160 aaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||    
T  18163063 aaaatcacaccaataataaatttgatgtgtggagtaagggataatcaggcaaccaaaat 18163005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 28101865 - 28101923
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  28101865 aaaattacaccaataataaacttgatgtgtggagcaagggataatcaagcaaccaaaat 28101923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 3315078 - 3315026
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  3315078 cacaccaataataaacttgatgtgtggagcaagggataatcaagcaaccaaaa 3315026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 50494400 - 50494344
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| ||| ||||||||    
T  50494400 aaaatcacaccaataacaacttgatgtgtggagcaagagataattaagcaaccaaaa 50494344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 18099027 - 18099085
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||| |||||    
T  18099027 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaacaaaaat 18099085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 28761304 - 28761362
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||  |||||||||    
T  28761304 aaaatcacaccaataataatcttgatgtgtggagcaagtgataatcaaacaaccaaaat 28761362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 32219485 - 32219427
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||||    
T  32219485 aaaatcacacaaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaat 32219427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 38210772 - 38210726
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaa 206  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||    
T  38210772 aaaatcacaccaataacaacttgatgtgtggagcaagggattatcaa 38210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 1321881 - 1321824
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||| | ||||||||    
T  1321881 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaa 1321824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 6063300 - 6063357
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| |||| |||||||||||||||  |||||||||| ||| |||||||||    
T  6063300 aaaatcacaccgataacaacttgatgtgtggaacaagggataattaagcaaccaaaat 6063357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 27635515 - 27635572
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||| ||||||||    
T  27635515 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 27635572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 42990701 - 42990644
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||| | ||||||||    
T  42990701 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaa 42990644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 561640 - 561696
Alignment:
Q  160 aaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||| |||||||    
T  561640 aaaatcacaccaataaaatacttgatgtgtggagtaagtaataatcaagcaaccaaa 561696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 880106 - 880150
Alignment:
Q  164 tcacaccaataataa-cttgatgtgtggagtaagggataatcaag 207  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||    
T  880106 tcacaccaataataaacttgatgtgtggagtaaggaataatcaag 880150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 3859908 - 3859856
Alignment:
Q  164 tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||| ||||||||||||||| ||||||||| | ||| ||||||||    
T  3859908 tcacaccaataacaacttgatgtgtggaataagggatagttaagcaaccaaaa 3859856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 15781276 - 15781228
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaag 207  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||    
T  15781276 aaaaacacaccaataacaaacttgatgtgtggagtaagggataatcaag 15781228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 25533825 - 25533770
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |||||| ||||||||    
T  25533825 aaaatcacaccaataacaacttgatgtgtggagcaagagat-atcaagcaaccaaaa 25533770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 31151737 - 31151681
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||  ||||||||||||||| |||  ||||||||| ||||||||    
T  31151737 aaaatcacaccaataaatacttgatgtgtggagcaagtaataatcaagcaaccaaaa 31151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 36957703 - 36957651
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaacc 212  Q
    ||||||| | |||||| |||||||||||||||| |||||||||||||| ||||    
T  36957703 aaaatcatatcaataacaacttgatgtgtggagcaagggataatcaagcaacc 36957651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 7606465 - 7606516
Alignment:
Q  166 acaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||| |||||||||||||||| ||| |||| ||||| |||||||||    
T  7606465 acaccaataacaacttgatgtgtggagcaagagatagtcaagcaaccaaaat 7606516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 4666911 - 4666853
Alignment:
Q  160 aaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||| || ||||||||||||||| ||| |||| | |||||||||    
T  4666911 aaaatcacaccaataataaatttgatgtgtggagtaagtgattatcatgcaaccaaaat 4666853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 18096757 - 18096815
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||| |||||||||| || |||||||||||||| |||||||||||| | |||||||||    
T  18096757 aaaattacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat 18096815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 25635788 - 25635718
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaa 214  Q
    ||||||||||  ||| |||||||||| |||||  ||||||||||||||| |||  ||||||||| ||||||    
T  25635788 tgttgtgaattcgatgaaaatcacactaataaatacttgatgtgtggagcaagtaataatcaagcaaccaa 25635718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 1313800 - 1313747
Alignment:
Q  164 tcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  1313800 tcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 1313747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 4308143 - 4308184
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatc 204  Q
    ||||||||||||| |||||||||||||||| |||| ||||||    
T  4308143 atcacaccaataacaacttgatgtgtggagcaaggaataatc 4308184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 5926630 - 5926683
Alignment:
Q  164 tcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||| || ||| ||||||| ||||||| ||||||||||||||||||    
T  5926630 tcacaccaataacaaacttcatgtgtgaagtaaggaataatcaagtaaccaaaa 5926683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 24980104 - 24980051
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| || |||||||||||||| |||||||||||| | |||||||||    
T  24980104 cacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat 24980051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 27101043 - 27101096
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||| |||||||||||||||| || | ||||||| | ||||||||    
T  27101043 atcacaccaataacaacttgatgtgtggagcaatgaataatcaggcaaccaaaa 27101096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 36012226 - 36012169
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||| ||||| |||||||||||||  ||||||||    
T  36012226 aaaatcacaccaataacaaacttgatgtatggagcaagggataatcaaacaaccaaaa 36012169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 45883340 - 45883283
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||    
T  45883340 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagttaagcaaccaaaa 45883283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 53915355 - 53915412
Alignment:
Q  160 aaaatcacaccaataa-taacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||  |||||||||| ||||| |||||||| ||||| ||||||||    
T  53915355 aaaatcacaccaataacaaacttgatgtatggagcaagggatagtcaagcaaccaaaa 53915412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 53917523 - 53917580
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| ||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  53917523 aaaatcacactaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 53917580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 26720928 - 26720892
Alignment:
Q  180 ttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  26720928 ttgatgtgtggagcaagggataatcaagcaaccaaaa 26720892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 51674626 - 51674682
Alignment:
Q  160 aaaatcacaccaataa-taacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    ||||||||||||||||  |||||||||| ||||| |||| ||||||||| |||||||    
T  51674626 aaaatcacaccaataacaaacttgatgtatggagcaaggaataatcaagcaaccaaa 51674682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 22132229 - 22132302
Alignment:
Q  144 tgttgtgaatctgatcaa-aatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  22132229 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 22132302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 2484712 - 2484788
Alignment:
Q  141 tactgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  2484712 tactgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 2484788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 18847644 - 18847572
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  18847644 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaa 18847572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 22134457 - 22134530
Alignment:
Q  144 tgttgtgaatctgatcaa-aatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||  ||||||||    
T  22134457 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagcaagggataatcaaacaaccaaaa 22134530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 5198895 - 5198823
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  5198895 tgttgtgaattcgatgaaaatcacaccaataataacttgatgtgtggagcaatggataatcaagcaaccaaaa 5198823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9176331 - 9176387
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  9176331 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 9176387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 22044230 - 22044305
Alignment:
Q  143 ctgttgtgaatctgatc--aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| |||||  ||||| |||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  22044230 ctgttgtgaatttgatcgaaaaataacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 22044305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 22046544 - 22046600
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  22046544 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 22046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 24348676 - 24348620
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  24348676 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 24348620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 5635316 - 5635390
Alignment:
Q  142 actgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| ||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||    
T  5635316 actgttgcgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaatcaaccaaaa 5635390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 6765318 - 6765261
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  6765318 aaaatcacaccaataacaaacttgatgtgtggagtaagggataatcaagcaaccaaaa 6765261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 11006094 - 11006167
Alignment:
Q  144 tgttgtgaatctgatc-aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  |||| |||| ||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  11006094 tgttgtgaattcgatcgaaaaacacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 11006167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 11008408 - 11008481
Alignment:
Q  144 tgttgtgaatctgatc-aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  |||| |||| ||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  11008408 tgttgtgaattcgatcgaaaaacacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 11008481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 31849439 - 31849512
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  31849439 ctgttgcgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 31849512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 47868877 - 47868820
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| | |||||||||    
T  47868877 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaggcaaccaaaat 47868820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 53405609 - 53405552
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  53405609 aaaatcacaccaataataaacttgatgtgtggagcaagggataatcaagcaaccaaaa 53405552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 8631276 - 8631332
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||    
T  8631276 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaactaaaa 8631332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9174003 - 9174059
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||    
T  9174003 aaaatcacactaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 9174059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 11435430 - 11435374
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  11435430 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 11435374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 22780229 - 22780285
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  22780229 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 22780285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 22782594 - 22782650
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  22782594 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 22782650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 51015720 - 51015664
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  51015720 aaaaacacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 51015664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 3937143 - 3937198
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||    
T  3937143 aaaatcacaccaataacaacttgatgtgaggagcaagggataatcaagcaaccaaa 3937198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 17662108 - 17662155
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaag 207  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17662108 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaag 17662155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 26085836 - 26085891
Alignment:
Q  162 aatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  26085836 aatcacaccaataacaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 26085891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 7941815 - 7941742
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| ||||||||||||| || |||||||||||||||| |||||||||| ||| ||||||||    
T  7941815 ctgttgcgaattcgatgaaaatcacaccaacaacaacttgatgtgtggagcaagggataattaagcaaccaaaa 7941742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 14787291 - 14787348
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  14787291 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 14787348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 14789290 - 14789347
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  14789290 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 14789347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 22802594 - 22802651
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  22802594 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 22802651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 37312941 - 37312998
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||    
T  37312941 aaaatcacaccaataataaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 37312998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 38928041 - 38928098
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  38928041 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 38928098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 40637545 - 40637492
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  40637545 atcacaccaataacaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 40637492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 16931648 - 16931704
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| ||||| |||||||||| |||||||||| ||| ||||||||    
T  16931648 aaaatcacaccaataacaacttaatgtgtggagcaagggataattaagcaaccaaaa 16931704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 18709021 - 18709077
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  18709021 aaaaccacaccaataacaacttgatgtgtggagcaaggcataatcaagcaaccaaaa 18709077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 38409679 - 38409623
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||||| ||| ||||    
T  38409679 aaaaacacaccaataacaacttgatgtgtggagcaagggataatcaagcaactaaaa 38409623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 14633792 - 14633741
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaacc 212  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||||    
T  14633792 aaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaacc 14633741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 47210655 - 47210710
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| ||| |||||| ||| ||||||||    
T  47210655 aaatcacaccaataacaacttgatgtgtggagcaagagataataaagcaaccaaaa 47210710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 3824466 - 3824524
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| |||||||||    
T  3824466 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 3824524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 36919446 - 36919504
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||||||| | |||||||||    
T  36919446 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat 36919504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 36921355 - 36921413
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||||||| | |||||||||    
T  36921355 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat 36921413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 18409210 - 18409267
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||| ||||||||    
T  18409210 aaaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagcaaccaaaa 18409267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 24446524 - 24446577
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||    
T  24446524 cacaccaataacaaacttgatgtgtgaagtaagggataatcaagcaaccaaaat 24446577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 37089229 - 37089286
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| || ||||||||||| ||||||||    
T  37089229 aaaatcacaccaataacaaacttgatgtgtggagcaatggataatcaagcaaccaaaa 37089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 41997958 - 41997901
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||    
T  41997958 aaaaacacaccaataataaacttgatgtgtggagaaagtgataatcaagcaaccaaaa 41997901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 49089027 - 49088970
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||| |||||||||||| ||||| ||||||||    
T  49089027 aaaatcacaccaataacaaacttgatgtgttgagtaagggatagtcaagcaaccaaaa 49088970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 11437838 - 11437782
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||| ||||| ||| |||||||||| | ||||||    
T  11437838 aaaatcacaccaataacaacttgatgtatggagcaagagataatcaagcagccaaaa 11437782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 38270016 - 38270068
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || ||||||||||||||||||||||| ||||| ||||||||    
T  38270016 cacaccaataacaaacttgatgtgtggagtaagggatagtcaagcaaccaaaa 38270068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 44599697 - 44599752
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| || ||||||| ||| ||||||||    
T  44599697 aaaatcacaccaataacaacttgatgtgtggagcaa-ggataattaagcaaccaaaa 44599752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 47275177 - 47275137
Alignment:
Q  177 aacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  47275177 aacttgatgtgtggagtaagggataatcaagcaatcaaaat 47275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 9148705 - 9148654
Alignment:
Q  165 cacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| |||||||||||||||  ||| |||||||||| ||||||||    
T  9148705 cacaccaataacaacttgatgtgtggaacaagagataatcaagcaaccaaaa 9148654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 19096353 - 19096298
Alignment:
Q  160 aaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaa 214  Q
    |||||||||| |||||||| || |||||||||||||||||||| ||||| ||||||    
T  19096353 aaaatcacactaataataaatttgatgtgtggagtaagggatagtcaagcaaccaa 19096298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 619320 - 619370
Alignment:
Q  165 cacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaa 214  Q
    |||||||||||||| || |||||||||||||||||||| ||||| ||||||    
T  619320 cacaccaataataaatttgatgtgtggagtaagggatagtcaagcaaccaa 619370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 2891763 - 2891705
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| || | ||||||||| |||||||||    
T  2891763 aaaatcacaccaataacaaacttgatgtgtggagcaaagaataatcaagcaaccaaaat 2891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 19323177 - 19323103
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  ||| |||||||||||||||| | ||||||||||||||| |||  ||||||||| ||| |||||    
T  19323177 tgttgtgaattcgatgaaaatcacaccaataaaatacttgatgtgtggagcaagtaataatcaagcaactaaaat 19323103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 5664722 - 5664649
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| | ||||||||||||||| | |  ||||||||| ||||||||    
T  5664722 tgttgtgaattcgatgaaaatcacaccaataaaatacttgatgtgtggagaaggtaataatcaagcaaccaaaa 5664649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 8756103 - 8756176
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| ||||||||| |||||| | ||||||||||||||| |||  ||||||||| ||||||||    
T  8756103 tgttgtgaattcgatgaaaatcacatcaataaaatacttgatgtgtggagcaagtaataatcaagcaaccaaaa 8756176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 16453779 - 16453722
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||| | ||||||||    
T  16453779 aaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa 16453722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 16455697 - 16455640
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||| | ||||||||    
T  16455697 aaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa 16455640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 22800722 - 22800779
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || ||||||||| |||| |||||||| ||||| ||||||||    
T  22800722 aaaatcacaccaataacaaacttgatgtggggagcaagggatagtcaagcaaccaaaa 22800779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 24889265 - 24889224
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatc 204  Q
    ||||||||||||| |||||||||||||||| |||| ||||||    
T  24889265 atcacaccaataacaacttgatgtgtggagcaaggaataatc 24889224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 33415352 - 33415409
Alignment:
Q  161 aaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||| ||||| || |||||||||||||| |||||||| ||||| |||||||||    
T  33415352 aaatcacacaaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 33415409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 47563230 - 47563173
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| || |||||||||||||| |||| ||||||||| ||||||||    
T  47563230 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 47563173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 10750137 - 10750064
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  10750137 tgttgtgaattcgatcaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 10750064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 10757613 - 10757540
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  10757613 tgttgtgaattcgatcaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 10757540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 31543172 - 31543099
Alignment:
Q  144 tgttgtgaatctgatcaa-aatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||    
T  31543172 tgttgtgaatctgatcaataatcacaccaataacaacttgatgtgtggagcaagggttaatcaagcaaccaaaa 31543099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 34479259 - 34479332
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||| |||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  34479259 tgttgcgaatttgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 34479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 34476910 - 34476967
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  34476910 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 34476967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 4410442 - 4410386
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  4410442 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 4410386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 38959989 - 38960045
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  38959989 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 38960045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 25921333 - 25921388
Alignment:
Q  162 aatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  25921333 aatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 25921388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 2175341 - 2175266
Alignment:
Q  144 tgttgtgaatctgatcaaaa---tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||||||||   |||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  2175341 tgttgtgaattcgatcaaaaaagtcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 2175266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 3372994 - 3373051
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  3372994 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 3373051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 15354431 - 15354488
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  15354431 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 15354488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 15356707 - 15356764
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  15356707 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 15356764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 21684293 - 21684366
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| || |||||    
T  21684293 ctgttgcgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaatcaaaa 21684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 23665467 - 23665410
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  23665467 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 23665410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 23741714 - 23741771
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  23741714 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 23741771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 23793120 - 23793177
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  23793120 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 23793177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 38882526 - 38882453
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  38882526 ctgttgcgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 38882453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 31545517 - 31545457
Alignment:
Q  148 gtgaatctgatcaa-aatcacaccaataataacttgatgtgtggagtaagggataatcaag 207  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||| ||||||||    
T  31545517 gtgaatctgattaataatcacaccaataacaacttgatgtgtggagtaagggttaatcaag 31545457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 39798451 - 39798395
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||    
T  39798451 aaaatcacaccaataacaatttgatgtgtggagcaagggataatcaagcaaccaaaa 39798395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 10528955 - 10529012
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||||||||||||| || |||||||||||| | |||||||||    
T  10528955 aaaatcacaccaataacaacttgatgtgtgaagcaagggataatcaggcaaccaaaat 10529012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 25804442 - 25804389
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  25804442 atcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 25804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 27912958 - 27912901
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  27912958 aaaatcccaccaataacaaacttgatgtgtggagtaagggataatcaagcaaccaaaa 27912901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 4237049 - 4236993
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||| ||||||||    
T  4237049 aaaatcacaccaataacaacttgatgtgtgaagcaagagataatcaagcaaccaaaa 4236993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 15552667 - 15552611
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||| ||||    
T  15552667 aaaatcacaccaataacaacttgatgcgtgaagtaagggataatcaagcaactaaaa 15552611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 31179230 - 31179286
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||| ||||| |||||||||| ||| ||||||||    
T  31179230 aaaatcacaccaataacaacttgatgtatggagcaagggataattaagcaaccaaaa 31179286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 36402187 - 36402245
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||||||| | |||||||||    
T  36402187 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat 36402245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 10474185 - 10474242
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||| ||| ||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  10474185 aaaattacatcaataataaacttgatgtgtggagcaaggaataatcaagtaaccaaaa 10474242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 10587252 - 10587180
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataa-taacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| ||||||||||||||||  |||||||||||||||| || ||||||||||| ||||||||    
T  10587252 tgttgtgaattcgatgaaaatcacaccaataacaaacttgatgtgtggagcaa-ggataatcaagcaaccaaaa 10587180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 18469431 - 18469374
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| |||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  18469431 aaaatcataccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 18469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 21948446 - 21948394
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  21948446 cacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 21948394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 27910855 - 27910797
Alignment:
Q  160 aaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || || ||||||||||| |||||||||||||  |||||||||    
T  27910855 aaaatcacaccaataacaaatttgatgtgtggagcaagggataatcaatcaaccaaaat 27910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 658200 - 658277
Alignment:
Q  140 atactgttgtgaatctgatcaaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||| ||||  ||| |||||||||||||||| || || ||||||||||| |||| ||||||| | ||||||||    
T  658200 atactgttgcgaattcgatgaaaatcacaccaataacaaatttgatgtgtggagcaaggaataatcaggcaaccaaaa 658277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 2724310 - 2724253
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || ||||||||||  || |||||||||||||| ||||||||    
T  2724310 aaaatcacaccaataacaaacttgatgtgtatagcaagggataatcaagcaaccaaaa 2724253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 17818352 - 17818409
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| || |||||||||||||| |||| ||||||||| ||||||||    
T  17818352 aaaaccacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 17818409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 18467106 - 18467049
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||||| || |||||    
T  18467106 aaaatcacactaataacaaacttgatgtgtggagcaagggataatcaagcaatcaaaa 18467049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 21289176 - 21289119
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||  || |||||||||||||| |||||||| ||||| ||||||||    
T  21289176 aaaatcacaccaatatcaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 21289119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 34530576 - 34530633
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||| ||| ||| |||||||||| ||||||||    
T  34530576 aaaatcacaccaataacaaacttgatgtgtcgagcaagtgataatcaagcaaccaaaa 34530633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 36208990 - 36208933
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||| ||||||||| |||||||||| ||| ||| |||||||||| ||||||||    
T  36208990 aaaatcacatcaataataaacttgatgtgtagagcaagtgataatcaagcaaccaaaa 36208933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 39854904 - 39854847
Alignment:
Q  160 aaaatcacaccaataat-aacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||| |||||||| ||||||| |||||||| | ||| ||||||||    
T  39854904 aaaatcacaccaataataaacttgatatgtggagcaagggatagttaagcaaccaaaa 39854847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 40221946 - 40221889
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| || ||||| ||||| ||||||||    
T  40221946 aaaatcacaccaataacaaacttgatgtgtggagcaaaggatagtcaagcaaccaaaa 40221889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 41585597 - 41585654
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||| | ||| |||||||||| ||||||||    
T  41585597 aaaatcacaccaataacaaacttgatgtgtggggcaagagataatcaagcaaccaaaa 41585654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 35215433 - 35215506
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  35215433 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 35215506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 19504178 - 19504250
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  19504178 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 19504250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 36558738 - 36558794
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  36558738 aaaatcacaccaataataacttgatgtgtggagcaagggataatcaagcaaccaaaa 36558794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 23452094 - 23452151
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  23452094 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 23452151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 35217810 - 35217883
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||| ||| ||||||||    
T  35217810 tgttgtgaatctgatcaaaaatcacaccaataacaacttgatgtgtggagcaagagataattaagcaaccaaaa 35217883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 42453890 - 42453817
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||    
T  42453890 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaat 42453817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13909907 - 13909959
Alignment:
Q  164 tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  13909907 tcacaccaataacaacttgatgtgtggagtaagggataatcaagcaaccaaaa 13909959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 19501859 - 19501915
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  19501859 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 19501915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 36560998 - 36561054
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  36560998 aaaatcacaccaataacaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 36561054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 24162059 - 24162137
Alignment:
Q  140 atactgttgtgaatctgatcaaaat--cacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||  ||| |||||  ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  24162059 atactgttgtgaatacgatgaaaatatcacaccaataacaacttgatgtgtggagaaagagataatcaagcaaccaaaa 24162137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 45279860 - 45279915
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  45279860 aaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 45279915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 28459037 - 28459111
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataata-acttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||  ||| |||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||    
T  28459037 ctgttgtgaattcgatgaaaatcacaccaataaaacacttgatgtgtggagcaagtgataatcaagcaaccaaaa 28459111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 27105195 - 27105138
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  27105195 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 27105138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 45332037 - 45332093
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||  |||||||||| ||| ||||||||    
T  45332037 aaaatcacaccaataacaacttgatgtgtggaacaagggataattaagcaaccaaaa 45332093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 17849510 - 17849453
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  17849510 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 17849453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 19008033 - 19007976
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||| ||||||||    
T  19008033 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa 19007976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 37962808 - 37962865
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||| |||||| |||||    
T  37962808 aaaatcacatcaataataaacttgatgtgtggagtaagtgataattaagtaatcaaaa 37962865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 43623440 - 43623501
Alignment:
Q  160 aaaatcacaccaataa-taacttgatgtgtggagtaagggataatcaagtaaccaaaattaa 220  Q
    |||||||||||||||| ||||||||||||||||| ||  |||||||| | ||||||||||||    
T  43623440 aaaatcacaccaataactaacttgatgtgtggagcaatagataatcaggcaaccaaaattaa 43623501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 5375225 - 5375264
Alignment:
Q  177 aacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  5375225 aacttgatgtgtggagtaagggataatcaagcaatcaaaa 5375264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 45238859 - 45238917
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||| |||||||||||||  ||| |||| ||||| |||||||||    
T  45238859 aaaatcacaccaataataaacttgatgtgtggaccaagcgatagtcaagcaaccaaaat 45238917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 22874502 - 22874445
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||| ||| ||||    
T  22874502 aaaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagcaactaaaa 22874445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 34979456 - 34979509
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||    
T  34979456 cacaccaataacaaacttgatgtgtggagtaaggaataataaagcaaccaaaat 34979509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 17848814 - 17848774
Alignment:
Q  177 aacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  17848814 aacttgatgtgtggagcaagtgataatcaagcaaccaaaat 17848774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 21520556 - 21520612
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaattaa 220  Q
    ||||||||||| || |||||||||||||| ||| |||||||| | ||||||||||||    
T  21520556 cacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaattaa 21520612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 22287203 - 22287255
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  22287203 cacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 22287255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 42923373 - 42923425
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| ||| |||||||||| ||||||||    
T  42923373 cacaccaataacaaacttgatgtgtggagcaagagataatcaagcaaccaaaa 42923425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 4518 - 4582
Alignment:
Q  144 tgttgtgaatctgatc-aaaatcacaccaataataacttgatgtgtggagtaagggataatcaag 207  Q
    |||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  4518 tgttgtgaatctgatccaaaatcacaccaataacaatttgatgtgtggagtaagggataatcaag 4582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 14231 - 14303
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  14231 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 14303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 7349135 - 7349192
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  7349135 aaaatcacaccaataacaacttgatgtgtggagtaagggataattaagcaaccaaaat 7349192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 7351509 - 7351565
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  7351509 aaaatcacaccaataacaacttgatgtgtggagtaagggataattaagcaaccaaaa 7351565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 7471838 - 7471894
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  7471838 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 7471894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 9027051 - 9027107
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  9027051 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 9027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 28487984 - 28487928
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  28487984 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 28487928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 38394417 - 38394361
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  38394417 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 38394361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 36059 - 36004
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  36059 aaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 36004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 1850411 - 1850356
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  1850411 aaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 1850356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 2935717 - 2935644
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||  ||| |||||||||||||||| ||||||||||||| || |||||||||| ||| ||||||||    
T  2935717 ctgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtgaagcaagggataattaagcaaccaaaa 2935644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 20299908 - 20299835
Alignment:
Q  144 tgttgtgaatctgatcaaaa-tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||| |||| |||| |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  20299908 tgttgtgaatttgatgaaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 20299835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 40550260 - 40550203
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  40550260 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 40550203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 1046775 - 1046831
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  1046775 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 1046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 1606810 - 1606754
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  1606810 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaa 1606754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 11759558 - 11759502
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  11759558 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 11759502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 20297793 - 20297737
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  20297793 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 20297737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 25542959 - 25542903
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| || |||||    
T  25542959 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaatcaaaa 25542903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 28485996 - 28485940
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||    
T  28485996 aaaatcacaccaataacaacttgatatgtggagcaagggataatcaagcaaccaaaa 28485940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 38397070 - 38397014
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||    
T  38397070 aaaatcacaccaataacaacttgatgtgtggagcaagggataataaagcaaccaaaa 38397014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 40836601 - 40836657
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||    
T  40836601 aaaatcacaccaataacaacttgatgtgtggagcaagggataatcaaacaaccaaaa 40836657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 40946777 - 40946705
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| | ||||||| |||||| |||||||||||||||| |||||||||||||| ||||||||    
T  40946777 tgttgtgaattcgatgagaatcacatcaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 40946705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 48458084 - 48458028
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  48458084 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 48458028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 44994 - 44939
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||||    
T  44994 aaatcacaccaataacaacttgatgtgtggagcaatggataatcaagcaaccaaaa 44939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 3879009 - 3878954
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  3879009 aaatcacatcaataataacttgatgtgtggagcaagagataatcaagcaaccaaaa 3878954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 42223583 - 42223525
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  42223583 aaaaacacaccaataacaaacttgatgtgtggagtaagggataatcaagcaaccaaaat 42223525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 20626464 - 20626407
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||| |||||||||||| ||| |||||||||| |||||||||    
T  20626464 aaaatcacaccaataacaacctgatgtgtggagcaagagataatcaagcaaccaaaat 20626407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 20630355 - 20630298
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||| |||||||||||| ||| |||||||||| |||||||||    
T  20630355 aaaatcacaccaataacaacctgatgtgtggagcaagagataatcaagcaaccaaaat 20630298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 20642774 - 20642717
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| ||| |||||||||||| ||| |||||||||| |||||||||    
T  20642774 aaaatcacaccaataacaacctgatgtgtggagcaagagataatcaagcaaccaaaat 20642717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 22137510 - 22137453
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| ||| |||||||||    
T  22137510 aaaatcacaccaataacaacttgatgtgtggagcaagagataattaagcaaccaaaat 22137453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 40552537 - 40552480
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| ||| |||||||||    
T  40552537 aaaatcacaccaataacaacttgatgtgtggagcaagagataattaagcaaccaaaat 40552480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 43253357 - 43253430
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| |||||||||||||||| || ||||||||||||| ||| |||||||||| ||||||||    
T  43253357 ctgttgcgaattcgatgaaaatcacaccaataacaatttgatgtgtggagcaagagataatcaagcaaccaaaa 43253430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 1049151 - 1049203
Alignment:
Q  164 tcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  1049151 tcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 1049203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 1502832 - 1502879
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaag 207  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  1502832 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaag 1502879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 7092070 - 7092128
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||| ||||| |||||||||    
T  7092070 aaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaat 7092128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 42330864 - 42330920
Alignment:
Q  161 aaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||| |||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  42330864 aaatcacgccaataataaacttgatgtgtggagcaatggataatcaagcaaccaaaa 42330920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 3036154 - 3036099
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||| || ||||||| ||||| ||| |||||||||| ||||||||    
T  3036154 aaatcacaccaataacaatttgatgtttggagcaagagataatcaagcaaccaaaa 3036099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 18345967 - 18345916
Alignment:
Q  165 cacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||| || |||||||||||||||| |||||||| ||||| ||||||||    
T  18345967 cacaccaacaacaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 18345916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 39145866 - 39145905
Alignment:
Q  177 aacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  39145866 aacttgatgtgtggagtaagtgataatcaagcaaccaaaa 39145905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 7094317 - 7094375
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||| ||| ||||| |||||||||    
T  7094317 aaaatcacaccaataacaaacttgatgtgtggagcaaggcatagtcaagcaaccaaaat 7094375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 21990570 - 21990520
Alignment:
Q  168 accaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||| |||||||||||||| |||||||||||| | |||||||||    
T  21990570 accaataataaacttgatgtgtggagcaagggataatcaggcaaccaaaat 21990520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 31434910 - 31434968
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||| ||||||||| || ||||||    
T  31434910 aaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaatcaaaat 31434968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 4295798 - 4295855
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||| || |||||| ||||||||    
T  4295798 aaaatcacaccaataacaaacttgatgtgtggagcaaggaatcatcaagcaaccaaaa 4295855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 11355687 - 11355630
Alignment:
Q  160 aaaatcacaccaataataactt-gatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||||||||| || ||||||||||| |||| ||||||| | ||||||||    
T  11355687 aaaatcacaccaataataaatttgatgtgtggagcaaggaataatcaggcaaccaaaa 11355630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 24749017 - 24748960
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||| ||||||||||| || |||||||||||||| |||||||||||||  ||||||||    
T  24749017 aaaaccacaccaataacaaacttgatgtgtggagcaagggataatcaaacaaccaaaa 24748960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 31153708 - 31153741
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagt 193  Q
    |||||||||||||||| |||||||||||||||||    
T  31153708 aaaatcacaccaataacaacttgatgtgtggagt 31153741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 7469881 - 7469936
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||  ||||||||||||| ||| ||||    
T  7469881 aaaatcacaccaataacaatttgatgtgtggag-cagggataatcaagcaactaaaa 7469936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 22108483 - 22108443
Alignment:
Q  177 aacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||| ||| |||||||||    
T  22108483 aacttgatgtgtggagcaagggataattaagcaaccaaaat 22108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 44725000 - 44724948
Alignment:
Q  165 cacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  44725000 cacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 44724948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 455 - 399
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  455 aaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaat 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 3322 - 3254
Alignment:
Q  147 tgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaa 215  Q
    |||||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  3322 tgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaa 3254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 6629 - 6572
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  6629 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 6572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 22547 - 22490
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  22547 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 22490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 24822 - 24765
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||    
T  24822 aaaatcacaccaataacaacttgatgtgtggagcaagggataattaagcaaccaaaat 24765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 29617 - 29544
Alignment:
Q  143 ctgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||| ||||  ||| |||||||||||||||| |||||||||||||||| |||||||||||||| || |||||    
T  29617 ctgttgcgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagggataatcaagcaatcaaaa 29544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 1310 - 1366
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||    
T  1310 aaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaaccaaaa 1366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 12732 - 12788
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  12732 aaaatgacaccaataacaacttgatgtgtggagcaagggataatcaagcaaccaaaa 12788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 41325 - 41397
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||  ||| |||||||||||||||| |||||||||||||||| ||| |||||||||| || |||||    
T  41325 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaatcaaaa 41397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 69131 - 69206
Alignment:
Q  142 actgttgtgaatctgatcaaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||  ||| |||||||||||||||| || |||||||||||||| |||||||||||| | ||||||||    
T  69131 actgttgtgaattcgatgaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaa 69206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 50440 - 50383
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  50440 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 50383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 52439 - 52382
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||    
T  52439 aaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa 52382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 183500 - 183551
Alignment:
Q  161 aaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaacc 212  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||||    
T  183500 aaatcacaccaataacaacttgatgtgtggagcaagagataatcaagcaacc 183551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 1309 - 1365
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    |||||||||||||||| |||||||||||||||| ||  |||||||||| ||||||||    
T  1309 aaaatcacaccaataacaacttgatgtgtggagaaaaagataatcaagcaaccaaaa 1365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 11335 - 11388
Alignment:
Q  163 atcacaccaataataacttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||| ||| ||||    
T  11335 atcacaccaataacaacttgatgtgtggagtaaggaataattaagcaacgaaaa 11388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 45 - 1
Alignment:
Q  160 aaaatcacaccaataataacttgatgtgtggagtaagggataatc 204  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||    
T  45 aaaatcacaccaataacaacttgatgtgtggagcaagagataatc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 4402 - 4362
Alignment:
Q  177 aacttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  4402 aacttgatgtgtggagtaagggataatcaagcaatcaaaat 4362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 79614 - 79556
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaat 217  Q
    |||||||||||||||| || |||||||||||||| |||||||||| | | |||||||||    
T  79614 aaaatcacaccaataacaaacttgatgtgtggagcaagggataattaggcaaccaaaat 79556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 36022 - 35965
Alignment:
Q  160 aaaatcacaccaataataa-cttgatgtgtggagtaagggataatcaagtaaccaaaa 216  Q
    ||||| |||||||||| || |||||||||||||| |||||||| ||||| ||||||||    
T  36022 aaaattacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa 35965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 16656 - 16608
Alignment:
Q  144 tgttgtgaatctgatcaaaatcacaccaataataacttgatgtgtggag 192  Q
    ||||||||||  ||| |||||||||||||||| ||||||||| ||||||    
T  16656 tgttgtgaattcgatgaaaatcacaccaataaaaacttgatgcgtggag 16608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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