View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4583-Insertion-4 (Length: 669)
Name: NF4583-Insertion-4
Description: NF4583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4583-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 642; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 642; E-Value: 0
Query Start/End: Original strand, 8 - 669
Target Start/End: Complemental strand, 14672325 - 14671665
Alignment:
| Q |
8 |
aagaactctttccgtaatatacatgagcaagtcaaaaaggctgaagagaaagttgagcaagtgcagtttcagcttcagatttcaggttacaatgatgagt |
107 |
Q |
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| T |
14672325 |
aagaactctttccgtaatatacatgagcaagtcaaaaaagctgaagagaaagttgagcaagtgcagtttcagcttcagatttcaggttacaatgatgagt |
14672226 |
T |
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| Q |
108 |
taacaattcaagaaaggcaagctcaaagtatgttagatttcgctctgaagatcgaggaaatcaagagtcaaatggcatgatgaaggagacagaaacacta |
207 |
Q |
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| T |
14672225 |
taacaattcaagaaaggcaagctcaaagtatgttagatttcgctctgaagatcgaggaaatcaagagtcaaatggcatgatgaaggagacagaaacacta |
14672126 |
T |
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| Q |
208 |
gatacttccatagaatggctaagatcaagaatgcaacaaaactcatatcaaccataataaacggagatcaagttatctcagaccaagaggaaataacaag |
307 |
Q |
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| T |
14672125 |
gatacttccatagaatggctaagatcaagaatgcaacaaaactcatatcaaccataataaacggagatcaagttatctcagaccaagaggaaataacaag |
14672026 |
T |
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| Q |
308 |
tcttataatccaccattacgctgatttatttaataactcttcaattttgcagcatgatggacttacataagaagtgattccaaatttgatacaaaatcaa |
407 |
Q |
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| T |
14672025 |
tcttataatccaccattacgctgatttatttaataactcttcaattttgcagcatgatggacttacataagaagtgattccaaatttgatacaaaatcaa |
14671926 |
T |
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| Q |
408 |
actaatgctatgatgaccatattaccctcaaatgaagaatttataatgcactgctttcttctatcaatgcaattataaatcgtttcaacagatatgctag |
507 |
Q |
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| T |
14671925 |
actaatgctatgatgaccatattaccctcaaatgaagaatttataatgcactgctttcttctatcaatgcaattataaatcttttcaacagatatgctag |
14671826 |
T |
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| Q |
508 |
ctatttagtacaagttatcaatccaacaaaatccattttcttctcagggtctatgttaactcaaaggcaagccttcattgctaaccttttagggttctca |
607 |
Q |
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| T |
14671825 |
ctatttaggacaagttatcaatccaacaaaatccattttcttctcagggtctatgttaactcaaaggcaagccttcattgctaaccttttagggttctca |
14671726 |
T |
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| Q |
608 |
gctgggctctcttcgaatctcttacttgggagcaccaatcttcaaaggtaaacctaaaatta |
669 |
Q |
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| T |
14671725 |
gct-ggctctcttcgaatctcttacttgggagcaccaatcttcaaaggtaaacctaaaatta |
14671665 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 17671725 - 17671841
Alignment:
| Q |
10 |
gaactctttccgtaatatacatgagcaagtcaaaaaggctgaagagaaagttgagcaagtgcagtttcagcttcagatttcaggttac-aatgatgagtt |
108 |
Q |
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||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
17671725 |
gaactcttttggtaatatacatgagcaagtcaaaaaagctgaagagaaagttgagcaagtgcagtttcagcttcagatttcaggttacaaatgatgagtt |
17671824 |
T |
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| Q |
109 |
aacaattcaagaaaggc |
125 |
Q |
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| T |
17671825 |
aacaattcaagaaaggc |
17671841 |
T |
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