View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4585_high_10 (Length: 245)
Name: NF4585_high_10
Description: NF4585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4585_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 41081932 - 41081723
Alignment:
| Q |
20 |
aattcgaagaaaaaatgtacaaaggtcgtggtggttctgcctccaaatcggaggatcgaaagcgaatcaacgatgttctcgataagcagcttgaacgatc |
119 |
Q |
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| T |
41081932 |
aattcgaagaaaaaatgtacaaaggtcgtggtggttctgcctccaaatcggaggatcgaaagcgaatcaacgatgttctcgataagcagcttgaacgatc |
41081833 |
T |
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| Q |
120 |
ttctccttcaacttcgcgtcccatcaatggcaaaagcaacaaagagagagaaaccaataccatcaaggatcctcttcttcaacgatcctccaaaactgcc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41081832 |
ttctccttcaacttcgcgtcccatcaatggcaaaagcaacaaagagagagaaaccaataccatcaaggatcctcttcttcaacgatcctccaaaactgcc |
41081733 |
T |
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| Q |
220 |
aatatctctg |
229 |
Q |
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|||||||||| |
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| T |
41081732 |
aatatctctg |
41081723 |
T |
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