View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4586_high_10 (Length: 463)

Name: NF4586_high_10
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4586_high_10
NF4586_high_10
[»] chr3 (37 HSPs)
chr3 (17-446)||(32315586-32316013)
chr3 (17-189)||(26582822-26582994)
chr3 (17-189)||(14546046-14546218)
chr3 (17-189)||(27934452-27934624)
chr3 (17-189)||(52835546-52835718)
chr3 (17-189)||(49499844-49500016)
chr3 (25-189)||(27284971-27285135)
chr3 (17-189)||(33162530-33162702)
chr3 (17-189)||(46962792-46962964)
chr3 (17-189)||(16056350-16056521)
chr3 (17-189)||(29838504-29838676)
chr3 (17-189)||(38807539-38807711)
chr3 (17-189)||(42093605-42093776)
chr3 (17-189)||(50645473-50645645)
chr3 (18-189)||(7029386-7029557)
chr3 (18-189)||(49121716-49121888)
chr3 (21-189)||(21323101-21323270)
chr3 (17-189)||(55092206-55092380)
chr3 (52-189)||(49500088-49500225)
chr3 (21-189)||(17109852-17110020)
chr3 (53-189)||(32315377-32315513)
chr3 (52-189)||(46962583-46962720)
chr3 (21-189)||(50645686-50645854)
chr3 (52-189)||(29838295-29838432)
chr3 (52-189)||(55092452-55092589)
chr3 (31-179)||(26582624-26582771)
chr3 (21-189)||(38807752-38807920)
chr3 (21-189)||(33162325-33162489)
chr3 (30-165)||(42093420-42093555)
chr3 (52-189)||(14545836-14545974)
chr3 (52-189)||(27934696-27934833)
chr3 (17-105)||(17110061-17110149)
chr3 (21-189)||(52835759-52835927)
chr3 (21-154)||(889164-889297)
chr3 (21-120)||(27285183-27285282)
chr3 (129-189)||(19590439-19590499)
chr3 (140-189)||(17109748-17109797)
[»] chr1 (38 HSPs)
chr1 (17-189)||(26244550-26244722)
chr1 (17-189)||(20062008-20062180)
chr1 (17-189)||(50096134-50096306)
chr1 (17-189)||(14602011-14602183)
chr1 (17-189)||(50624767-50624939)
chr1 (17-189)||(33558-33730)
chr1 (17-189)||(28031648-28031820)
chr1 (17-189)||(33619106-33619278)
chr1 (22-189)||(18963610-18963777)
chr1 (17-189)||(12322093-12322265)
chr1 (17-189)||(43191866-43192038)
chr1 (17-189)||(47828964-47829135)
chr1 (17-189)||(37172458-37172630)
chr1 (17-189)||(10913776-10913947)
chr1 (17-179)||(39288364-39288527)
chr1 (17-121)||(42154819-42154923)
chr1 (21-189)||(20061799-20061967)
chr1 (21-189)||(28031861-28032029)
chr1 (21-189)||(50096347-50096515)
chr1 (31-189)||(43191657-43191815)
chr1 (21-189)||(37172249-37172417)
chr1 (52-189)||(50625011-50625146)
chr1 (64-189)||(39027482-39027607)
chr1 (21-161)||(10913988-10914128)
chr1 (21-189)||(26244763-26244931)
chr1 (20-189)||(42154963-42155131)
chr1 (52-167)||(33802-33917)
chr1 (52-189)||(12322337-12322476)
chr1 (21-189)||(47829176-47829342)
chr1 (20-189)||(14602223-14602390)
chr1 (31-189)||(39288153-39288313)
chr1 (91-189)||(50616940-50617038)
chr1 (68-189)||(39027606-39027727)
chr1 (21-110)||(33618976-33619065)
chr1 (43-83)||(51999582-51999622)
chr1 (17-89)||(29584494-29584566)
chr1 (137-189)||(42154781-42154832)
chr1 (20-48)||(52490079-52490107)
[»] chr5 (35 HSPs)
chr5 (19-189)||(3598414-3598584)
chr5 (17-189)||(24491053-24491225)
chr5 (17-189)||(10461555-10461727)
chr5 (17-189)||(18786191-18786362)
chr5 (20-189)||(43197114-43197283)
chr5 (17-189)||(6542469-6542640)
chr5 (17-189)||(15969431-15969603)
chr5 (17-189)||(4122787-4122959)
chr5 (17-189)||(5933335-5933507)
chr5 (20-189)||(14868678-14868843)
chr5 (17-189)||(41137142-41137314)
chr5 (17-189)||(6497193-6497365)
chr5 (17-189)||(22394334-22394506)
chr5 (17-189)||(29991105-29991275)
chr5 (21-189)||(22394125-22394293)
chr5 (18-189)||(40588861-40589031)
chr5 (52-189)||(3598658-3598795)
chr5 (21-189)||(6497406-6497574)
chr5 (21-189)||(14868887-14869054)
chr5 (21-189)||(18785983-18786150)
chr5 (30-189)||(24490845-24491003)
chr5 (35-189)||(40589481-40589634)
chr5 (52-189)||(6542260-6542397)
chr5 (17-189)||(7133127-7133298)
chr5 (52-189)||(43196902-43197039)
chr5 (21-189)||(4122580-4122746)
chr5 (52-189)||(10461346-10461483)
chr5 (52-189)||(25329098-25329235)
chr5 (21-189)||(5933126-5933294)
chr5 (21-157)||(15969644-15969780)
chr5 (21-121)||(7133339-7133439)
chr5 (30-119)||(29991325-29991414)
chr5 (52-94)||(41137386-41137428)
chr5 (17-74)||(16416075-16416132)
chr5 (20-48)||(24640660-24640688)
[»] chr8 (40 HSPs)
chr8 (17-189)||(13154240-13154412)
chr8 (17-189)||(6943658-6943830)
chr8 (17-186)||(26479504-26479673)
chr8 (17-188)||(31685672-31685843)
chr8 (17-189)||(220514-220685)
chr8 (17-189)||(689669-689840)
chr8 (17-189)||(734137-734308)
chr8 (17-189)||(858033-858204)
chr8 (17-189)||(9180046-9180218)
chr8 (17-189)||(18764495-18764667)
chr8 (17-189)||(31186375-31186546)
chr8 (17-189)||(31403123-31403295)
chr8 (17-189)||(24332262-24332435)
chr8 (20-189)||(6891780-6891948)
chr8 (17-189)||(2835126-2835298)
chr8 (17-189)||(13405449-13405621)
chr8 (17-189)||(37586227-37586398)
chr8 (17-94)||(3272816-3272893)
chr8 (31-189)||(3272944-3273102)
chr8 (21-189)||(6943871-6944039)
chr8 (21-189)||(13154453-13154621)
chr8 (22-173)||(9180260-9180411)
chr8 (21-168)||(13405662-13405809)
chr8 (55-189)||(2835342-2835475)
chr8 (21-189)||(18764286-18764454)
chr8 (21-189)||(31402913-31403082)
chr8 (21-189)||(24332476-24332640)
chr8 (55-189)||(26479327-26479460)
chr8 (20-89)||(27993490-27993559)
chr8 (20-89)||(28050792-28050861)
chr8 (52-121)||(31685916-31685985)
chr8 (21-121)||(31186587-31186687)
chr8 (133-189)||(31186670-31186726)
chr8 (32-72)||(20112533-20112573)
chr8 (130-189)||(3272750-3272809)
chr8 (39-89)||(37586119-37586169)
chr8 (129-166)||(6892070-6892107)
chr8 (52-94)||(6892023-6892065)
chr8 (129-189)||(20112427-20112483)
chr8 (137-167)||(31685972-31686002)
[»] chr7 (35 HSPs)
chr7 (17-189)||(13426502-13426674)
chr7 (17-189)||(42516868-42517040)
chr7 (17-189)||(34595529-34595701)
chr7 (17-189)||(35026446-35026617)
chr7 (17-186)||(44483233-44483403)
chr7 (17-189)||(22364862-22365033)
chr7 (17-189)||(44219504-44219676)
chr7 (17-189)||(19157696-19157866)
chr7 (17-189)||(20757095-20757265)
chr7 (17-189)||(24566-24740)
chr7 (17-120)||(40729133-40729236)
chr7 (17-189)||(34487143-34487315)
chr7 (17-121)||(31579641-31579745)
chr7 (17-189)||(19476394-19476567)
chr7 (21-173)||(42517081-42517233)
chr7 (21-189)||(24357-24525)
chr7 (52-189)||(19157938-19158075)
chr7 (52-189)||(20757337-20757474)
chr7 (30-189)||(44483449-44483608)
chr7 (52-189)||(34595319-34595457)
chr7 (52-189)||(22954576-22954713)
chr7 (52-189)||(40729308-40729445)
chr7 (21-189)||(44219295-44219463)
chr7 (21-189)||(19476608-19476778)
chr7 (21-189)||(35026658-35026825)
chr7 (21-189)||(22364658-22364822)
chr7 (52-120)||(829926-829994)
chr7 (52-120)||(1195106-1195174)
chr7 (21-121)||(31579500-31579600)
chr7 (21-120)||(22954410-22954509)
chr7 (129-189)||(13426326-13426386)
chr7 (31-119)||(34487366-34487454)
chr7 (103-189)||(827099-827186)
chr7 (103-189)||(829110-829197)
chr7 (137-189)||(40729093-40729145)
[»] chr6 (35 HSPs)
chr6 (17-189)||(8926188-8926360)
chr6 (17-189)||(8936445-8936617)
chr6 (17-189)||(19661559-19661731)
chr6 (17-189)||(31717176-31717348)
chr6 (17-189)||(3484784-3484957)
chr6 (17-189)||(3345229-3345401)
chr6 (17-189)||(30609076-30609248)
chr6 (17-194)||(5923822-5924000)
chr6 (19-189)||(33783609-33783780)
chr6 (17-189)||(17238033-17238207)
chr6 (17-189)||(28853485-28853658)
chr6 (17-121)||(29819455-29819559)
chr6 (21-189)||(17238248-17238416)
chr6 (21-189)||(30608867-30609035)
chr6 (21-189)||(19661351-19661518)
chr6 (17-189)||(16525197-16525366)
chr6 (21-189)||(16525407-16525575)
chr6 (21-189)||(26272194-26272362)
chr6 (21-189)||(8926401-8926571)
chr6 (21-189)||(8936658-8936828)
chr6 (17-94)||(5404666-5404743)
chr6 (21-189)||(3345021-3345189)
chr6 (38-189)||(9571627-9571778)
chr6 (52-189)||(3485019-3485156)
chr6 (52-189)||(5404815-5404952)
chr6 (52-189)||(28853730-28853867)
chr6 (52-189)||(5924072-5924210)
chr6 (84-189)||(5140691-5140796)
chr6 (21-121)||(31717389-31717489)
chr6 (82-189)||(5409170-5409277)
chr6 (129-189)||(5404601-5404661)
chr6 (30-189)||(33783397-33783557)
chr6 (137-189)||(29819416-29819468)
chr6 (52-157)||(29819631-29819736)
chr6 (137-179)||(31717476-31717518)
[»] chr4 (52 HSPs)
chr4 (17-189)||(989285-989457)
chr4 (17-189)||(13683005-13683177)
chr4 (17-189)||(5720954-5721125)
chr4 (17-189)||(37815342-37815514)
chr4 (17-189)||(22487221-22487393)
chr4 (17-186)||(2184604-2184774)
chr4 (17-189)||(16959974-16960146)
chr4 (17-189)||(17107433-17107605)
chr4 (17-189)||(43749948-43750120)
chr4 (17-189)||(11021674-11021846)
chr4 (17-189)||(9301779-9301950)
chr4 (17-189)||(46081584-46081756)
chr4 (17-189)||(26314685-26314857)
chr4 (17-154)||(17865012-17865149)
chr4 (17-189)||(39385371-39385544)
chr4 (17-189)||(16491648-16491820)
chr4 (17-121)||(46480986-46481090)
chr4 (17-189)||(12792782-12792953)
chr4 (21-189)||(17865190-17865358)
chr4 (17-189)||(4712180-4712351)
chr4 (21-189)||(4712392-4712559)
chr4 (23-189)||(13493100-13493267)
chr4 (17-189)||(32592953-32593121)
chr4 (21-189)||(37815555-37815724)
chr4 (52-189)||(13492885-13493022)
chr4 (54-189)||(26314477-26314611)
chr4 (21-189)||(32592744-32592912)
chr4 (52-167)||(12792595-12792710)
chr4 (21-189)||(17107646-17107813)
chr4 (21-189)||(16959764-16959933)
chr4 (52-189)||(16491892-16492028)
chr4 (21-189)||(22487434-22487600)
chr4 (21-119)||(43750161-43750259)
chr4 (17-118)||(20045874-20045975)
chr4 (21-189)||(11021887-11022055)
chr4 (21-179)||(13683218-13683369)
chr4 (21-189)||(989078-989244)
chr4 (104-189)||(42239370-42239455)
chr4 (52-121)||(2184464-2184532)
chr4 (35-120)||(6100534-6100619)
chr4 (31-119)||(9301641-9301729)
chr4 (129-189)||(17864948-17865008)
chr4 (21-109)||(46481131-46481219)
chr4 (102-189)||(39385183-39385270)
chr4 (52-119)||(5721197-5721265)
chr4 (52-119)||(20046047-20046114)
chr4 (138-189)||(46480947-46480998)
chr4 (129-167)||(46081449-46081487)
chr4 (140-189)||(2184425-2184474)
chr4 (131-176)||(14488126-14488171)
chr4 (131-176)||(31560634-31560679)
chr4 (141-189)||(43750279-43750327)
[»] chr2 (52 HSPs)
chr2 (17-189)||(41594161-41594333)
chr2 (17-189)||(30432805-30432977)
chr2 (17-189)||(3371303-3371475)
chr2 (17-189)||(14379323-14379495)
chr2 (17-189)||(19204593-19204765)
chr2 (17-189)||(38873475-38873645)
chr2 (17-189)||(18369223-18369394)
chr2 (17-189)||(28921195-28921366)
chr2 (20-189)||(7877537-7877707)
chr2 (17-189)||(2395158-2395330)
chr2 (17-189)||(13572473-13572644)
chr2 (17-189)||(29683177-29683347)
chr2 (17-189)||(3948574-3948747)
chr2 (17-189)||(12806549-12806722)
chr2 (17-189)||(33940887-33941058)
chr2 (31-189)||(25318518-25318676)
chr2 (17-189)||(37609166-37609337)
chr2 (17-189)||(6164108-6164280)
chr2 (17-189)||(6880183-6880355)
chr2 (17-189)||(17457928-17458100)
chr2 (17-118)||(4171597-4171698)
chr2 (52-189)||(29683419-29683556)
chr2 (17-189)||(32521475-32521648)
chr2 (21-189)||(18369014-18369182)
chr2 (17-121)||(10748704-10748808)
chr2 (17-109)||(30771149-30771241)
chr2 (21-189)||(4171739-4171907)
chr2 (21-189)||(28921407-28921575)
chr2 (31-189)||(12806773-12806931)
chr2 (21-189)||(2395371-2395539)
chr2 (21-189)||(10748495-10748663)
chr2 (21-189)||(42705166-42705334)
chr2 (31-189)||(14379114-14379272)
chr2 (17-90)||(42705052-42705125)
chr2 (52-189)||(41593952-41594089)
chr2 (21-189)||(3948365-3948533)
chr2 (21-189)||(30432597-30432764)
chr2 (21-189)||(7877324-7877493)
chr2 (52-189)||(33940682-33940819)
chr2 (52-189)||(3371547-3371684)
chr2 (21-121)||(6880042-6880142)
chr2 (53-189)||(19204838-19204975)
chr2 (21-189)||(13572685-13572853)
chr2 (21-189)||(37608958-37609125)
chr2 (21-179)||(17457729-17457887)
chr2 (38-168)||(32521706-32521837)
chr2 (32-119)||(6163969-6164056)
chr2 (137-189)||(6880003-6880055)
chr2 (145-189)||(13278065-13278110)
chr2 (17-74)||(18910050-18910106)
chr2 (78-119)||(26239075-26239116)
chr2 (21-89)||(25318417-25318485)
[»] scaffold0817 (2 HSPs)
scaffold0817 (17-189)||(3984-4156)
scaffold0817 (52-189)||(4227-4364)
[»] scaffold0006 (2 HSPs)
scaffold0006 (17-189)||(212622-212794)
scaffold0006 (21-189)||(212413-212581)
[»] scaffold0167 (1 HSPs)
scaffold0167 (17-189)||(4597-4769)
[»] scaffold0147 (3 HSPs)
scaffold0147 (17-189)||(25124-25296)
scaffold0147 (52-154)||(25356-25458)
scaffold0147 (130-189)||(25459-25518)
[»] scaffold0170 (2 HSPs)
scaffold0170 (17-187)||(8752-8922)
scaffold0170 (52-189)||(8542-8680)
[»] scaffold0103 (2 HSPs)
scaffold0103 (17-189)||(43487-43660)
scaffold0103 (21-189)||(43278-43446)
[»] scaffold0126 (2 HSPs)
scaffold0126 (17-189)||(36204-36375)
scaffold0126 (52-191)||(35993-36132)
[»] scaffold0021 (2 HSPs)
scaffold0021 (20-189)||(118030-118198)
scaffold0021 (52-168)||(118277-118393)
[»] scaffold0137 (3 HSPs)
scaffold0137 (21-189)||(36768-36934)
scaffold0137 (17-94)||(36975-37052)
scaffold0137 (129-189)||(37057-37117)
[»] scaffold0028 (3 HSPs)
scaffold0028 (17-98)||(74007-74088)
scaffold0028 (30-189)||(74137-74295)
scaffold0028 (129-189)||(73934-73994)
[»] scaffold0045 (2 HSPs)
scaffold0045 (129-189)||(43911-43971)
scaffold0045 (133-189)||(43994-44050)
[»] scaffold0062 (1 HSPs)
scaffold0062 (20-69)||(11299-11348)


Alignment Details
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 17 - 446
Target Start/End: Original strand, 32315586 - 32316013
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| | || |||    
T  32315586 atgaatattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtatggccta 32315685  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaaccaaatannnnnnnnatctttgtaaat 216  Q
    |||||       ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||        ||||||||||||    
T  32315686 aaaccaaaaaa-tatttttacagggactaaaaccaaaatatcagatatttgcagggaccatttccatatttaagcagatattttttt-atctttgtaaat 32315783  T
Q  217 gataaatgtcacatatttagtacacacttccgtacaaacttcctttacctttttccaaattagtaaaattcaataatggtggataaagattcttaaacac 316  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32315784 gataaatgtcacatatttagtacacacttccgtacaaactttctttacctttttccaaatgagtaaaattcaataatggtggataaagattcttaaacac 32315883  T
Q  317 atatacaagtttaatagagtaaaattgcatcatgcatgaacattttgcatgtaatcgtacgtgtactagtagttattttcttgtccaatcaaccttctag 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32315884 atatacaagtttaatagagtaaaattgcatcatgcatgaacattttgcatgtaatcgtacgtgtactagtagttattttcttgttcaatcaaccttctag 32315983  T
Q  417 cttgcttcttccagtttctaataacattag 446  Q
    ||||||||||||||||||||||||||||||    
T  32315984 cttgcttcttccagtttctaataacattag 32316013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 26582822 - 26582994
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26582822 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 26582921  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26582922 aaatcaaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagggaccatttccatatttaa 26582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 14546046 - 14546218
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  14546046 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgcagggacta 14546145  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  14546146 aaactcaaaaaatatttttacagtgactgaaaccaaaatgtcagatatttgcagggaccatttccatatttaa 14546218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 27934624 - 27934452
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  27934624 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgaagggacta 27934525  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  27934524 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 27934452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 52835718 - 52835546
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  52835718 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 52835619  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  52835618 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaa 52835546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 49500016 - 49499844
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  49500016 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggacta 49499917  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||   |||||||||||  |||||||||||||||||||    
T  49499916 aaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcaaggaccatttccatatttaa 49499844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 27285135 - 27284971
Alignment:
Q  25 tatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnn 124  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||       
T  27285135 tatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa 27285036  T
Q  125 nnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
        |||||||| ||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  27285035 aaaatatttttataggaactaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 27284971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33162530 - 33162702
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||| ||||||    
T  33162530 atgaatattatacggaccaatttcaatatgaaatgattttacaaggattaacacaaaatatcaaggaccaaaaccaaatattctatatttgcaaggacta 33162629  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  33162630 aaaccaaaaaaatatttttatagggactaaaactaaaacgtcagatatttacggggaccatttccatatttaa 33162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 46962792 - 46962964
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||    
T  46962792 atgaatattatagggatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattctatatttgcagggatta 46962891  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  46962892 aaaccaaaaaaatatttttatagggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 46962964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 16056521 - 16056350
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  16056521 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 16056422  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  16056421 aaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccaattccatatttaa 16056350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 29838504 - 29838676
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | |||||| ||||||    
T  29838504 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatttttgcaaggacta 29838603  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | ||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  29838604 aaaccaaaaaaatatttttatatggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaa 29838676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 38807711 - 38807539
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  38807711 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattgaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 38807612  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | || |||||||||||| | ||||||||| | |||||||||| |||||||||    
T  38807611 aaaccaaaaaaatatttttataagggctaaaaccaaaacgccagatatttacagggaccattttcatatttaa 38807539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 42093605 - 42093776
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||    
T  42093605 atgaatattattgggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggatta 42093704  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       || ||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  42093705 aaaacaaaaaaata-ttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaa 42093776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 50645645 - 50645473
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |||||| ||||||    
T  50645645 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggacta 50645546  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| ||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  50645545 aaaccaaaaaaatatttttataggaactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaa 50645473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 7029557 - 7029386
Alignment:
Q  18 tgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaa 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||    
T  7029557 tgaatattatagggatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccgaagaccaaaaccaaatattctatatttgcagggactaa 7029458  T
Q  118 aaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||       |||||||| |||||||| ||| |||| | ||||||||||| || |||||||||||||||||    
T  7029457 aaccaaaaaaatatttttatagggactagaacaaaaacgccagatatttgcaggaaccatttccatatttaa 7029386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 49121888 - 49121716
Alignment:
Q  18 tgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaa 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||  ||||||| | |||||||| |||||||    
T  49121888 tgaatattatagggaccaatttcaatatgaaataattttacaatgattaaaacaaaatatcaaggaccaaaactaaatattttatatttgcatggactaa 49121789  T
Q  118 aacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  49121788 aaccaaaaaaagtatttttataggggctaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 49121716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 21323101 - 21323270
Alignment:
Q  21 atattataggga-ccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||    
T  21323101 atattatagggatccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggattaaaaccaaatattctatatttgcagggactaaaa 21323200  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||        |  |||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  21323201 ccaaaaaaaaaaatttatagggactaaaaccaaaacgctagatatttgcagggaccatttccatatttaa 21323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 55092380 - 55092206
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||    
T  55092380 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcacggacta 55092281  T
Q  117 aa--accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||  |         |||||||| || |||||||||||||| ||||||||||| | |||| ||||| |||||||||    
T  55092280 aaataaaaaaaaaatatttttatagagactaaaaccaaaacgtcagatatttacagggatcattttcatatttaa 55092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 49500088 - 49500225
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||| |||||||||||       |||||||||||||||||||||||    
T  49500088 attttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaaaaatatttttacagggactaaaacca 49500187  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| ||| |||||||| ||||| |||| |||||||||    
T  49500188 aaatatcaaatatttgcagggactattttcatatttaa 49500225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 17110020 - 17109852
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||| ||||||||    
T  17110020 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaac 17109921  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||| ||||||||||||||||||||||||| ||||| |||| |||||||||    
T  17109920 caaaaaaatatttttacaaggattaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 17109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 32315513 - 32315377
Alignment:
Q  53 ttttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaa 152  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||| |       ||||||||||| ||||||||||||    
T  32315513 ttttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaatcaaaaaaatatttttacagagactaaaaccaa 32315414  T
Q  153 aatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||| ||||| |||| || ||||||    
T  32315413 aatgtcagatatttgcagggactattttcacatttaa 32315377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 46962720 - 46962583
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| |||||||||||| |||||||||||| ||||| || | ||||||||||||||||||||       | |||||||||||||||||||||    
T  46962720 attttacagggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaattttttttacagggactaaaacca 46962621  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| ||||| |||| |||||||||    
T  46962620 aaatatcagatatttgcagggactattttcatatttaa 46962583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 50645686 - 50645854
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||| |||||||| ||||||||||| ||||| || | |||||||||||||||||||    
T  50645686 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaac 50645785  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| |||||||||||| |||||||||||||||| | ||||| |||| |||||||||    
T  50645786 caaaaaaatatttttatagggactaaaactaaaatgtcagatatttacagggactattttcatatttaa 50645854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 29838432 - 29838295
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||| |||||||||        ||||||| |||||||||||||||    
T  29838432 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgcagagactaaaacgaaaaaaatatttttgcagggactaaaacca 29838333  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| ||||| |||| |||||||||    
T  29838332 aaatatcagatatttgcagggactattttcatatttaa 29838295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 55092452 - 55092589
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||| || | ||||||||| ||||||||||       ||||||||||| || ||||||||    
T  55092452 attttacaatgattaaaacaatataccaaggaccaaaatcaaattttttatatttgcagagactaaaaccaaaaaaatatttttacagagaataaaacca 55092551  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||  ||||| |||| |||||||||    
T  55092552 aaatgtcagatatttggagggactattttcatatttaa 55092589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 26582771 - 26582624
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||||| |||| |||||||||| ||||| |||       ||    
T  26582771 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcagg-actaacaccaacaaaata 26582673  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  26582672 tttttacagggactaaaaccaaaatatcagatatttgcggagactattt 26582624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 38807752 - 38807920
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||| ||| || ||||| |||||||  |||||||||| ||||| || | |||||||||||||||||||    
T  38807752 atattacaaggaccaaatccaatatgaatcaatttttcaaagactaaaataaaatacagaggaccaaaaccaaattttttatatttgcagggactaaaac 38807851  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||    
T  38807852 caaacatatatttttacagggactaaaatcaaaatgtcagatatttacagggactatttccatatttaa 38807920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 33162489 - 33162325
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||| ||||| || || ||||||||||||||||||    
T  33162489 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttttaatttgcagggactaaaac 33162390  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       | ||||||||| ||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  33162389 c---aatttttttttacagagactaaaa-taaaatgtcagatatttgcggggactattttcatatttaa 33162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 42093555 - 42093420
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||| ||||| || | ||||||||| ||||||||||       |    
T  42093555 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagagactaaaaccaaaaaaat 42093456  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatt 165  Q
    |||||||||||||||||| |||||||||||||||||    
T  42093455 atttttacagggactaaatccaaaatgtcagatatt 42093420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 14545974 - 14545836
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctt-tatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacc 150  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || || |||||||||||||||||| |       || ||||||| |||||||||||    
T  14545974 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaatcaaaaaaatacttttacatggactaaaacc 14545875  T
Q  151 aaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||  |||| |||| || ||||||    
T  14545874 aaaatgtcagatatttgcaaggactattttcacatttaa 14545836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 27934696 - 27934833
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||| |||||||||||| |||| | | | ||||| |||||||||||| |       ||||||||| |||||||||||||    
T  27934696 attttacaaggactaaaacaaaataacaaggaccaaaaccaaaaaatttatatttacagggactaaaatcaaaaaaatatttttactgggactaaaacca 27934795  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
     |||||||||||||||| ||||| |||| |||||||||    
T  27934796 gaatgtcagatatttgcagggactattttcatatttaa 27934833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 17110061 - 17110149
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatt 105  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||  || | |||||||||| ||||    
T  17110061 atgaatattatagagaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaagattaagaccaaatattctatatt 17110149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 52835759 - 52835927
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa- 119  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||||||||||||     
T  52835759 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatacgaaggaccaaaaccaaattttttatatttgcagggactaaaat 52835858  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |||||||||| ||||||||||||||||| | ||||||||| ||||| |||| |||||||||    
T  52835859 aaaaaaatatatttttaca-ggactaaaaccaaaatgacggatatttgcagggactattttcatatttaa 52835927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 889297 - 889164
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||| | || ||||||||    
T  889297 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttacgggaactaaaac 889198  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    |       |||||||||||||| ||||| |||||    
T  889197 caaaaatatatttttacagggattaaaatcaaaa 889164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 27285183 - 27285282
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   ||||||||| || |||||||||||| ||| |||||||| ||||  || | |||||||||||||||||||    
T  27285183 atattataaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaatatcaatgaccaaaaccaaactttttatatttgcagggactaaaac 27285282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 19590499 - 19590439
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| || |||||||| ||||| ||||||||||||| | |||| |||||||||||||    
T  19590499 tatttttatagcgactaaaatcaaaacgtcagatatttgcagagaccgtttccatatttaa 19590439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 17109797 - 17109748
Alignment:
Q  140 ggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||  |||||||||| ||||| |||| |||||||||    
T  17109797 ggactaaaaccaaaatgctagatatttgcagggactattttcatatttaa 17109748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 26244722 - 26244550
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  26244722 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaactaaataccaaggaccaaaatcaaatattctatatttgcagggacta 26244623  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || ||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26244622 aatccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaa 26244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 20062008 - 20062180
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20062008 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 20062107  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  20062108 aaacccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 20062180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 50096306 - 50096134
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  50096306 atgaatattatagggaccaatttcaatataaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 50096207  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  50096206 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaatttccatatttaa 50096134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 14602183 - 14602011
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  14602183 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 14602084  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  14602083 aaactaaaaaaatatttttatatggactaaaaccaaagtgccagatatttgcagggaccatttccatatttaa 14602011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 50624939 - 50624767
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  50624939 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 50624840  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||| | || | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  50624839 aaaccaaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 50624767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 33730 - 33558
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||    
T  33730 atgaatattatagggaccattttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagagacta 33631  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| ||||||||||||||||| ||||||||||||| |||| ||| | |||||||||    
T  33630 aaactagaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggatcatgttcatatttaa 33558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 28031820 - 28031648
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||    
T  28031820 atgaatattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattatatatttgcagggacta 28031721  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       || ||||| | |||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  28031720 aaaccaaaaaaataattttataaggactaaaactaaaacgccagatatttgcagggaccatttccatatttaa 28031648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33619106 - 33619278
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||    
T  33619106 atgaatattatagggaccaatctcaataagaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgtagggacta 33619205  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||||||||||   ||||||||||| ||||||||||||||||||||    
T  33619206 aaaccaaaaaaatatttttataggaactaaaaccaaaacaccagatatttgcagggaccatttccatatttaa 33619278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 18963777 - 18963610
Alignment:
Q  22 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||||    
T  18963777 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaatgaccaaaaccaaatattctatatttgcaaggactaaaacc 18963678  T
Q  122 nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
           |||||||| ||||||||||||||||| | | ||||||||| ||||||||||||| ||||||    
T  18963677 aaaaaaatatttttatagggactaaaaccaaaacgccggatatttgcagggaccatttccacatttaa 18963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 12322265 - 12322093
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| ||||||||    
T  12322265 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaatatacctaggaccaaaaccaaatattctatatttgtagggacta 12322166  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    | |||       |||||||| ||||||||||||||||| ||||||||||| | | |||||||| |||||||||    
T  12322165 ataccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagagaccattttcatatttaa 12322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 43191866 - 43192038
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  43191866 atgaatattatagggaccaatttcaatatgaaatgattttacaaggatcaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaggaacta 43191965  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||| |||||||| ||||||||| |  ||||||| | |||||||||    
T  43191966 aaaccaaaaaaatatttttataggaactaaatccaaaatgccagatatttacatggaccatattcatatttaa 43192038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 47829135 - 47828964
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  47829135 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaagaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 47829036  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| |||||||||| |||||||| |  |||||| | |||| |||||||||||||||    
T  47829035 aaa-caaaaaaatatttttatagggactaaatccaaaatgccgtatatttacagggatcatttccatatttaa 47828964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 37172458 - 37172630
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  37172458 atgaatattatagggaccaatattaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaaccaaatattctatattcgcagggacta 37172557  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||| | |||||||| |||||||||||    
T  37172558 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttaccgggaccatgtccatatttaa 37172630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10913947 - 10913776
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  10913947 atgaatattatagggaccaatctcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 10913848  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||| |||| ||||| |||||||||||   || ||||||||  |||||||||||||||||||    
T  10913847 aaaccaaaaaaatatctttatagggattaaaaccaaaa-cccaaatatttgcatggaccatttccatatttaa 10913776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 39288364 - 39288527
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  39288364 atgaatattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctttatttgaatggacta 39288463  T
Q  117 aaac-cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    ||||         |||||||| | ||| |||||| |||| ||||||||||||| ||||||||||    
T  39288464 aaacaaaaaaatatatttttataaggattaaaactaaaacgtcagatatttgcagggaccattt 39288527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 42154923 - 42154819
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  42154923 atgaatattatagggaccagtttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 42154824  T
Q  117 aaacc 121  Q
    |||||    
T  42154823 aaacc 42154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 20061967 - 20061799
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  20061967 atattacaaggaccaaatccaatatgaatcaattttacaaggagtaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 20061868  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  20061867 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 20061799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 28031861 - 28032029
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||  || | |||||||||||||||||||    
T  28031861 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaac 28031960  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  28031961 taaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 28032029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 50096347 - 50096515
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||    
T  50096347 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgtagggactaaaac 50096446  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||||  ||||||||||||||||||||||| ||||| |||| || ||||||    
T  50096447 caaaaaattatttttacacggacctaaaccaaaatgtcagatatttgcagggactattttcacatttaa 50096515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 43191815 - 43191657
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||| | || | ||||||||||||||||||||       ||    
T  43191815 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaata 43191716  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||| |||| |||||||||    
T  43191715 tttttacagggactaaaactaaaatatcagatatttgcagggacaattttcatatttaa 43191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 37172417 - 37172249
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||| ||||| ||||| || | |||||| |||||||||||     
T  37172417 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggatcaaaatcaaattttttatatttgaagggactaaaat 37172318  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||| ||||||||||| | ||| |||| |||||||||    
T  37172317 caaaaatatatttttacagggactaaaaccaaaatgacagatatttgcagagactattttcatatttaa 37172249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 50625011 - 50625146
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       | |||||||||||||||||||||    
T  50625011 attttacagggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaatt--tttttttacagggactaaaacca 50625108  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  50625109 aaatgtcagatatttgcagggactattttcatatttaa 50625146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 39027607 - 39027482
Alignment:
Q  64 ttaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagata 163  Q
    |||||||||||||||||||| ||||| ||||| || | ||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||    
T  39027607 ttaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaagcaaaatgtcagata 39027508  T
Q  164 tttgcggggaccatttccatatttaa 189  Q
    ||| ||||||| |||| || ||||||    
T  39027507 tttccggggactattttcacatttaa 39027482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 10913988 - 10914128
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||||| |||||||||   |||||||||||| | ||||||||||||||||||||||| ||||| |  | |||||||||||||||||||    
T  10913988 atattacaaggaccaattccaatatgaatcaattttacaaggactgaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 10914087  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcaga 161  Q
    |       |||||||||| ||||||||||||||||||||||    
T  10914088 caaaaaaatatttttacacggactaaaaccaaaatgtcaga 10914128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 26244763 - 26244931
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| || ||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||     
T  26244763 atattacaaggaccaaatccaatatgaatcaattttacaatgactaaaacaaaataccaaggatcaaaaccaaattttctatatttgcagggactaaaat 26244862  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||| |||||| ||||||||||||||||||||||||| || || |||| || ||||||    
T  26244863 caaaaaaatattttttcagggattaaaaccaaaatgtcagatatttgcaggaactattttcacatttaa 26244931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 42154963 - 42155131
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||| | ||||||| | |||||||||   |||||| ||||| |||||||||||| |||||||||||| ||||| || | ||||||||||||||||||    
T  42154963 aatattacaaggaccaaatccaatatgaatcaattttataaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaa 42155062  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||       ||||||||||||  |||||||||||||||||||||||| | ||||| |||| |||||||||    
T  42155063 cc-aaaaaatatttttacaggatctaaaaccaaaatgtcagatatttacagggactattttcatatttaa 42155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 33802 - 33917
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| || | ||||| ||| || |||||||       |||||||||||||||||||||||    
T  33802 attttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttacagagaataaaaccaaaaaaatatttttacagggactaaaacca 33901  T
Q  152 aaatgtcagatatttg 167  Q
    ||||||||||||||||    
T  33902 aaatgtcagatatttg 33917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 12322337 - 12322476
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa-ccnnnnnnntatttttacagggactaaaacc 150  Q
    |||||||||||| |||||||||||| |||||||||||| ||||| || || ||||||||||||||||| |        |||||||||||||| |||||||    
T  12322337 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaaatatttttacagggattaaaacc 12322436  T
Q  151 aaaa-tgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| ||||||| |||| |||||||||    
T  12322437 aaaattgtcagatatttacggggactattttcatatttaa 12322476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 47829176 - 47829342
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| |||||||||||| |||||||||||| ||| | || | |||||||||||||||||||    
T  47829176 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttgcagggactaaaac 47829275  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |   ||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  47829276 aaaaacaaaa--attacaggaactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 47829342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 14602223 - 14602390
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||| | || | ||||||||||||||||||    
T  14602223 aatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataacaaggaccaaaaccaatttttttatatttgcagggactaaaa 14602322  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |         |   ||| ||||| ||||||||||||||||||||||||| ||||| |||| |||||||||    
T  14602323 ctaaaaaaaaa--attatagggattaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 14602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 39288313 - 39288153
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaac-aaatattctttatttgcagggactaaaa-ccnnnnnnn 128  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| | |||| || | ||||||||| |||||||| |            
T  39288313 gaccaaatccaatatgaatctattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttatatttgcagtgactaaaatcaaaaaaaa 39288214  T
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||| |||||||| |||||||||| |||||||  ||||| |||| |||||||||    
T  39288213 tatttttacagagactaaaatcaaaatgtcatatatttggagggactattttcatatttaa 39288153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 50617038 - 50616940
Alignment:
Q  91 caaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||| ||||||||||||||||||||       ||| | || | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  50617038 caaatattctatatttgcagggactaaaaccaaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 50616940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 39027606 - 39027727
Alignment:
Q  68 aacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttg 167  Q
    ||||||||||||||||| |||| |||||||||| ||||||||  |||||||| |          ||||| | |||||||||| ||||| ||| |||||||    
T  39027606 aacaaaataccaaggactaaaaccaaatattctatatttgcaaagactaaaatcaaaaaaaatattttataaggactaaaactaaaatatcaaatatttg 39027705  T
Q  168 cggggaccatttccatatttaa 189  Q
    | ||||||||||||||||||||    
T  39027706 cagggaccatttccatatttaa 39027727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 33619065 - 33618976
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcag 110  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||  ||||||||||||||| |||||||| |||||||| | |||||||||    
T  33619065 atattacaaggaccaaatccaatatgaatcaattttacaaagacgaaaacaaaataccaacgaccaaaaccaaatattttatatttgcag 33618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 51999622 - 51999582
Alignment:
Q  43 tatgaaatgattttacaaggattaaaacaaaataccaagga 83  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  51999622 tatgaaatgattttacaaggactaaaacaaaatatcaagga 51999582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 29584566 - 29584494
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||||||| || |||||| |||||||||||  |||||| |||||| ||| |||| | |||||| |||||||    
T  29584566 atgaatattagagagaccaacttcaatatgaatagattttgcaaggactaagacaatacaccaagtaccaaaa 29584494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 42154832 - 42154781
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||| | ||||||||| ||  ||||||||||||||||||    
T  42154832 cagggactaaaaccaaaacg-cagatatttacgaagaccatttccatatttaa 42154781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 52490107 - 52490079
Alignment:
Q  20 aatattatagggaccaatttcaatatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  52490107 aatattatagggaccaatttcaatatgaa 52490079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 8e-65; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 3598584 - 3598414
Alignment:
Q  19 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  3598584 gaatattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 3598485  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||       ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  3598484 accaaaaaaatatttttacagggactaaatccaaaatgtcagatatttgcagggaccattttcatatttaa 3598414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 24491053 - 24491225
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  24491053 atgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggacta 24491152  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  24491153 aaaccaaacaaatatttttacagggactaaaaccaaaatgtcagattattgcagggaccatttccatatttaa 24491225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 10461555 - 10461727
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  10461555 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggacta 10461654  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  10461655 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaa 10461727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18786191 - 18786362
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  18786191 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca-ggacta 18786289  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  18786290 aaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 18786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 43197114 - 43197283
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  43197114 aatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 43197213  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
     |       |||||||| |||||||||||| ||||   ||||||||||| ||||||||||||||||||||    
T  43197214 acaaaaaaatatttttatagggactaaaacaaaaacaccagatatttgcagggaccatttccatatttaa 43197283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 6542469 - 6542640
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  6542469 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggactaaaaccaaatattctatatttgcagggacta 6542568  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       | |||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  6542569 aaa-caaatttttttttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 6542640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 15969603 - 15969431
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  15969603 atgaatattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 15969504  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | || |||||||   |||||||||||||||||||    
T  15969503 aaaccaaaaatatatttttatagggactaaaaccaaaacgccaaatatttgtaaggaccatttccatatttaa 15969431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 4122787 - 4122959
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||    
T  4122787 atgaatattataggggccaatttcaatatgaaatgattttactaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttacagggacta 4122886  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||| || ||| |||||||||||||||    
T  4122887 aaaccaaaaaaatatttttatagggactaaaagcaaaacgccagatatttacgaggaacatttccatatttaa 4122959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 5933335 - 5933507
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  5933335 atgaatattatagggaccgatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 5933434  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| ||| |||||| |||||| |  |||||||| | |||||||||| |||||||||    
T  5933435 aaacaaaaaatatatttttataggaactaaatccaaaacgctagatatttacagggaccattttcatatttaa 5933507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 14868843 - 14868678
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  14868843 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagtgactaaaa 14868744  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||       | |||||| ||||||||||||||||| | ||||||||||  |||||| |||||||||||||    
T  14868743 cc----aattttttttatagggactaaaaccaaaacgccagatatttggagggaccgtttccatatttaa 14868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 41137314 - 41137142
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||    
T  41137314 atgaatattatagggaccgatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaaggacta 41137215  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| | ||||||||||| | ||||||||||| | || |||||||||||||||    
T  41137214 aaaccaaaaaaatatttttataggtattaaaaccaaaacgccagatatttgcagtgatcatttccatatttaa 41137142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 6497365 - 6497193
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  6497365 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 6497266  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| | ||||||||  ||||| | || |||||| | | ||||||||||||||||||    
T  6497265 aaatcaaaaaaatatttttataaggactaaattcaaaacgccaaatatttacagagaccatttccatatttaa 6497193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 22394334 - 22394506
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  22394334 atgaatattatagggatcaagttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 22394433  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||| |||||| |  |||||||| | ||||| |||| |||||||||    
T  22394434 aaaccaaaaaaatatttttataggaactaaatccaaaacgctagatatttaccgggactattttcatatttaa 22394506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 29991275 - 29991105
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| ||    
T  29991275 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattttatatttgcagggatta 29991176  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| | ||||||||||  ||| | || |||||||  |||||||||| |||||||||    
T  29991175 aaatcaaaaaaatatttttatatggactaaaac--aaacgccaaatatttggagggaccattttcatatttaa 29991105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 22394293 - 22394125
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| |  ||||||||||| |||||||||||| || ||||||||| ||||| || | |||||||||||||||||||    
T  22394293 atattacaaggaccaaatccaatatgaattacttttacaaggactaaaacaaaatatcagggaccaaaaccaaattttttatatttgcagggactaaaac 22394194  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  22394193 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 22394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 40588861 - 40589031
Alignment:
Q  18 tgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaa 117  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| | ||||||||||||||||    
T  40588861 tgaatattatagagaccaattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatc-aaaccaaatattttatatttgcagggactaa 40588959  T
Q  118 aaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || |       | |||||| ||||| ||||| |||||   ||||||||||| ||||||||||||||||||||    
T  40588960 aaacaaaaaattttttttatagggattaaaagcaaaactccagatatttgcagggaccatttccatatttaa 40589031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 3598658 - 3598795
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| | || ||||||||||||||||||||       |||||||||||||||||||||||    
T  3598658 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 3598757  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||  |||| |||| || ||||||    
T  3598758 aaatgtcagatatttgcaaggactattttcacatttaa 3598795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 6497406 - 6497574
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| | |||||||||||| |||||||||||| |||||| ||||| ||||| || | |||||||||| |||||||     
T  6497406 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggatcaaaaccaaattttttatatttgcaggaactaaaat 6497505  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  6497506 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 6497574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 14868887 - 14869054
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||| ||||| || | |||||||||||||||||||    
T  14868887 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttt-tatatttgcagggactaaaac 14868985  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  14868986 caaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 14869054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18786150 - 18785983
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  18786150 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaac 18786051  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| ||||||||||||||||||| || |||||||| || ||||||||| |||||||    
T  18786050 caaaaaaatatttttatagggactaaaaccaaaatgcca-atatttgcaggaaccatttccttatttaa 18785983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 24491003 - 24490845
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||| | || ||||| ||||| |||| ||||||||||||||||||||       |    
T  24491003 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccgatgatcaaaaccaaattttctatatttgcagggactaaaaccaaaaaa-t 24490905  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  24490904 atttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 24490845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 40589481 - 40589634
Alignment:
Q  35 aatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttt 134  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| | |||||||||||||||||| |       | ||||    
T  40589481 aattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatc-aaaccaaatattttatatttgcagggactaaaaacaaatttttttttt 40589579  T
Q  135 tacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || ||||| ||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  40589580 tatagggattaaaagcaaaacgccagatatttgcagggaccatttccatatttaa 40589634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 6542397 - 6542260
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||| || | ||||||||||||||||||||       |||||||||| ||||||||||||    
T  6542397 attttacaaggactaaaataaaataccaaggatcaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacatggactaaaacca 6542298  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| ||||||||||||||| || |||| |||||||||    
T  6542297 aaatatcagatatttgcgggaacaattttcatatttaa 6542260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 7133298 - 7133127
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||  ||| | ||    
T  7133298 atgaatattatagggatcaatttcaatatgaaatgattttacaatgattaaaacaaaatatcaaggatcaaaatcaaatattctatatttataggaatta 7133199  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    | |||       |||||||| || ||||||||| |||||| || |||||| |  ||||||||| |||||||||    
T  7133198 ataccaaaaaaatatttttaaagagactaaaactaaaatgccatatatttac-aggaccattttcatatttaa 7133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 43197039 - 43196902
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||| || |||||||||||  |||| || | ||||||||||||||||||||       |||||||||||||||||||||||    
T  43197039 attttacaaggactaaaacaaaacactaaggaccaaaactaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 43196940  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||   |||| |||| |||||||||    
T  43196939 aaatgtcagatatttgtaaggactattttcatatttaa 43196902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 4122746 - 4122580
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| || ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||     
T  4122746 atattacaaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaat 4122647  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       | |||||||||||||||||| |||||||||| |||||||| ||||| |||| |||||||||    
T  4122646 c--aattttttttttacagggactaaaatcaaaatgtcaaatatttgcagggactattttcatatttaa 4122580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 10461483 - 10461346
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||         ||||||||||  |||||||||||    
T  10461483 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaatatttttacaaagactaaaacca 10461384  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| | ||||||||| ||||| |||| |||||||||    
T  10461383 aaatgacggatatttgcagggactattttcatatttaa 10461346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 25329235 - 25329098
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||| || | |||||| ||||||||||||        |||||||||||| ||||||| ||    
T  25329235 attttacaaggactaaaacataatacgaaggaccaaaatcaaattttttatatttgtagggactaaaacaaaaaatatatttttacaggaactaaaatca 25329136  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||||||||| |||| |||||||||    
T  25329135 aaatatcagatatttgcggggactattttcatatttaa 25329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 5933294 - 5933126
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||| |||||||| | ||||||||||||||||||     
T  5933294 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaagaccaaaaccaaatattttatatttgcagggactaaaat 5933195  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |   || ||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  5933194 aaaaataaaaaaattgcagggactaaaaccaaaatgtcacatatttgcagggacaattttcatatttaa 5933126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 15969644 - 15969780
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||| ||   |||||||||| | | ||||||||||||||||||||||| ||||| || | ||||||||||||||||||     
T  15969644 atattacaaggaccaaattcaatataaatcaattttacaagaacttaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaat 15969743  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgt 157  Q
    |       |||||||||||||||||||| ||||||||    
T  15969744 caaaaaattatttttacagggactaaaatcaaaatgt 15969780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 7133339 - 7133439
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| ||||||||||||||||||| |||| ||| | |||||||||||||||||||    
T  7133339 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaaaaaaataccaaggaccaaaaccaaaaattttatatttgcagggactaaaac 7133438  T
Q  121 c 121  Q
    |    
T  7133439 c 7133439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 29991325 - 29991414
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||||| |||||||||   |||||||||||| |||||||||||| ||| |||||||| ||||| || | |||||| |||||||||||    
T  29991325 ggaccaattccaatatgaatcaattttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgtagggactaaaa 29991414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 41137386 - 41137428
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  41137386 attttacaaggactaaaacaaaataccaaggactaaaaccaaa 41137428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 16416075 - 16416132
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaa 74  Q
    ||||||||||||  || |||||| ||||||||  ||||||||||||| ||||||||||    
T  16416075 atgaatattatatagatcaatttaaatatgaatagattttacaaggactaaaacaaaa 16416132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 24640660 - 24640688
Alignment:
Q  20 aatattatagggaccaatttcaatatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  24640660 aatattatagggaccaatttcaatatgaa 24640688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13154412 - 13154240
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13154412 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 13154313  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||   ||||||||||| ||||||||||||||||||||    
T  13154312 aaaccaaaaaaatatttttagagggactaaaaccaaaacaccagatatttgcagggaccatttccatatttaa 13154240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 6943830 - 6943658
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  6943830 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 6943731  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  6943730 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccaaatatttgcggggaccatttccatatttaa 6943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 26479504 - 26479673
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  26479504 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagggacta 26479603  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatt 186  Q
    |||||       | |||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  26479604 aaaccaaatttttttttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatt 26479673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 31685843 - 31685672
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  31685843 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 31685744  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatattta 188  Q
    |||||       |||||||| ||||| ||||||||||| |  |||||||||| |||||| ||||||||||||    
T  31685743 aaaccaaaaaaatatttttatagggattaaaaccaaaacgctagatatttgcagggaccttttccatattta 31685672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 220685 - 220514
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  220685 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 220586  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  220585 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 220514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 689840 - 689669
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  689840 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 689741  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  689740 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 689669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 734308 - 734137
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  734308 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 734209  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  734208 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 734137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 858204 - 858033
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  858204 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 858105  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  858104 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 858033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 9180218 - 9180046
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||| ||||||    
T  9180218 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaaaaccaaggaccacaaccaaatattctatatttgcatggacta 9180119  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| | ||||| ||||| | ||||||||||| |||||||||| |||||||||    
T  9180118 aaaccaaaaaaatatttttataggaattaaaatcaaaacgccagatatttgcagggaccattttcatatttaa 9180046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18764495 - 18764667
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18764495 atgaattttatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 18764594  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||         |  |||| |||||||| |||||||| | ||||||||||| |||||||||| |||||||||    
T  18764595 aaacaaataaacaaaatttatagggactataaccaaaacgccagatatttgcagggaccattttcatatttaa 18764667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 31186546 - 31186375
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  31186546 atgaatattataaggaccgattttaatatgaaatgattttacaag-attaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggacta 31186448  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  31186447 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 31186375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 31403123 - 31403295
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||    
T  31403123 atgaatattatagggaccaatctcaataagaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgaagggacta 31403222  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | | |||||||||||||   ||||||||||| ||||||||||||||||||||    
T  31403223 aaaccaaaaaaatatttttataagaactaaaaccaaaacaccagatatttgcagggaccatttccatatttaa 31403295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 24332435 - 24332262
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  24332435 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacccaaaccaaatattctatatttgcagggacta 24332336  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |||||||| ||||| ||||||||||| |||| |||||| |  ||| ||||| |||||||||    
T  24332335 aaaccaaaaaaaatatttttatagggattaaaaccaaaacgtcatatatttacaaggatcattttcatatttaa 24332262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 6891948 - 6891780
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggact-aaa 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  6891948 aatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6891849  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||        |||||||  || ||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  6891848 acaaaaaaaatattttt--agagactaaaacaaaaacgccagatatttgcagggaccatttccatatttaa 6891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 2835298 - 2835126
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||||| |||||||| | ||||| ||| |||||    
T  2835298 atgaatattatagggaccaatttcagtacgaaatgattttacaatgattaaaacaaaataccgaggaccaaaaccaaatattttatatttacagagacta 2835199  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||  |||||||||||||  |||||||||||| | ||||||||||||||||||    
T  2835198 aaaccaaaaaaatatttttatagaaactaaaaccaaaacatcagatatttgcagagaccatttccatatttaa 2835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13405621 - 13405449
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||| ||||| ||||| |||    
T  13405621 atgaatattataaggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaacaaaatattctatatttacagggtcta 13405522  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |   ||||||| ||||||  ||||||||||| |||||||||| |||||||||    
T  13405521 aaaccaaacaaatatttttataaaaactaaaatcaaaataccagatatttgcagggaccatttgcatatttaa 13405449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 37586227 - 37586398
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |  ||||| ||  |||||    
T  37586227 atgaatattatatggaccaatttcaatatgaaatgattttaccaggattaaaacaaaataccaaggaccaaaaccaaatatccaatatttaca-agacta 37586325  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |  || ||||||||||| | ||||||||||   |||||||||||||||||||    
T  37586326 aaaccaaaaatatatttttataaagaataaaaccaaaacgccagatatttgtaaggaccatttccatatttaa 37586398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 3272893 - 3272816
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3272893 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 3272816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 3272944 - 3273102
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||| | || | |||||||||||||||||| |       ||    
T  3272944 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaagttttttatatttgcagggactaaaatcaaaaaaata 3273043  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  3273044 tttttatagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 3273102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 6943871 - 6944039
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| |||||| |||| ||||||| ||||| ||   |||||||||||||||||||    
T  6943871 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaataaaatatcaagaaccaaaatcaaatttttcatatttgcagggactaaaac 6943970  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  6943971 caaaaaaatatttttacaggaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 6944039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 13154453 - 13154621
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  |||||||||||||||||||||||| ||| | || | |||||||||||||||||||    
T  13154453 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaac 13154552  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||| ||||| ||||||||||||||||||  ||||| |||| |||||||||    
T  13154553 caaaaaaatatttttacagggattaaaatcaaaatgtcagatatttgtagggactattttcatatttaa 13154621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 9180260 - 9180411
Alignment:
Q  22 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    ||||||| ||||||| | |||| ||||   |||||||||||| |||||||||||| |||||||||||| ||||| || | |||||||| |||||||||||    
T  9180260 tattataaggaccaaatccaatctgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaacc 9180359  T
Q  122 nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcgggga 173  Q
           |||||||||||||| ||||||||||||||||||||||||| ||||    
T  9180360 aaaacaatatttttacagggattaaaaccaaaatgtcagatatttgcaggga 9180411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 13405662 - 13405809
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||| ||||||||||||    
T  13405662 atattacaaggaccaaatccaatatgaatcaattttacaaggaataaaacaaaataccaaggaccaaaaccaaattttttatatttgaagggactaaaac 13405761  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgc 168  Q
    |       |||||||||||||| |||||||||||||||| ||||||||    
T  13405762 caaaaaaatatttttacagggattaaaaccaaaatgtcaaatatttgc 13405809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 2835342 - 2835475
Alignment:
Q  55 ttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    ||||||||| ||||||||||||||||| ||||||| ||| | || | |||||||||||||||||| |       ||||||||||| ||||||||||||||    
T  2835342 ttacaaggactaaaacaaaataccaagaaccaaaaccaattttt-tatatttgcagggactaaaatcaaaaaaatatttttacagcgactaaaaccaaaa 2835440  T
Q  155 tgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||| |||| |||||||||    
T  2835441 tgtcagatatttgcggggactattttcatatttaa 2835475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18764454 - 18764286
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  ||||||||||||||| |||||||| ||||  || | |||||| ||||||| ||||    
T  18764454 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaagaccaaaaccaaagtttttatatttgaagggactcaaac 18764355  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  18764354 caaaaaaatatttttacaaggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 18764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 31403082 - 31402913
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||  |||||||| |||||| |||||||| |||||||| | |||||||||||||||||||    
T  31403082 atattacaaggaccaaatccaatatgaatcaattttacaaagacgaaaacaaattaccaacgaccaaaaccaaatattttatatttgcagggactaaaac 31402983  T
Q  121 cnnnnnnn-tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||||| |||||||||||||||| |||||||||||| ||||| |||| |||||||||    
T  31402982 cccaaaaaatatttttacaaggactaaaaccaaaatatcagatatttgcagggactattttcatatttaa 31402913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 24332476 - 24332640
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | || ||||||||||||||||    
T  24332476 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttata-ttgcagggactaaaac 24332574  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |   |||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||    
T  24332575 aaaaaaaaaa---ttacagggactaaaactaaaatgtcagatatttgcagggacaattttcatatttaa 24332640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 55 - 189
Target Start/End: Complemental strand, 26479460 - 26479327
Alignment:
Q  55 ttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    ||||||||| |||||||||||||||| |||||||| ||||  || | ||||||||| ||||||||||       | ||||||||||||||||||||||||    
T  26479460 ttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagtgactaaaaccaatttttt-tttttacagggactaaaaccaaaa 26479362  T
Q  155 tgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| |||||||| ||||| |||| || ||||||    
T  26479361 tgtcaaatatttgcagggactattttcacatttaa 26479327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 27993490 - 27993559
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  27993490 aatattatagggaccaatttcattatgaatggattttacagggactaaaacaaaacaccaaggaccaaaa 27993559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 28050792 - 28050861
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  28050792 aatattatagggaccaatttcattatgaatggattttacagggactaaaacaaaacaccaaggaccaaaa 28050861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 31685916 - 31685985
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||||||||||||||    
T  31685916 attttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagggactaaaacc 31685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 31186587 - 31186687
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||||||| || |||||||||||||||||||||| ||||| || |  |||| |||||||||||||    
T  31186587 atattataaggaccaaatccaatatgaatcaattttacaaggactacaacaaaataccaaggaccaaaaccaaattttttagatttacagggactaaaac 31186686  T
Q  121 c 121  Q
    |    
T  31186687 c 31186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 31186670 - 31186726
Alignment:
Q  133 tttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  31186670 tttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 31186726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 20112573 - 20112533
Alignment:
Q  32 accaatttcaatatgaaatgattttacaaggattaaaacaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20112573 accaatttcaatatgaaatgattttacaaggattaaaacaa 20112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 3272809 - 3272750
Alignment:
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||| ||||| |||||||||    
T  3272809 atttttatagggactaaaaccaaaacgccagatatttgcagggatcatttacatatttaa 3272750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 37586169 - 37586119
Alignment:
Q  39 tcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    ||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  37586169 tcaatatgaataaattttacaaggactaaaacaaaataccaaggaccaaaa 37586119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 6892070 - 6892107
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatattt 166  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  6892070 tatttttacagggactaaaactaaaatgtcagatattt 6892107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 6892023 - 6892065
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    |||||||||||| |||||||||| |||||||||||||| ||||    
T  6892023 attttacaaggactaaaacaaaacaccaaggaccaaaaccaaa 6892065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 20112483 - 20112427
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| |||||||| |||||||   |||||||| ||||||||||||||||||||    
T  20112483 tatttttacagg-actaaaactaaaatgt---atatttgcagggaccatttccatatttaa 20112427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 167
Target Start/End: Original strand, 31685972 - 31686002
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttg 167  Q
    |||||||||||||||||||||||||||||||    
T  31685972 cagggactaaaaccaaaatgtcagatatttg 31686002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 13426502 - 13426674
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13426502 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 13426601  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||| |||| ||||||||||||| ||||||||| ||||||||||    
T  13426602 aaaccaaaaaaatatttttagagggactaaaactaaaacgtcagatatttgcagggaccattcccatatttaa 13426674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 42517040 - 42516868
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  42517040 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 42516941  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42516940 aaaccaaaaaaatatttttataggaactaaaaccaaaatgccagatatttgcagggaccatttccatatttaa 42516868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 34595529 - 34595701
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  34595529 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaggaccaaaaccaaatattctatatttgcagggacta 34595628  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || ||       |||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||    
T  34595629 aagccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagggaccattttcatatttaa 34595701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 35026617 - 35026446
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| ||||||    
T  35026617 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaatgatcaaaaccaaatattctatatttgcatggacta 35026518  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |        ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  35026517 aaa-caaaaaaaaatttttacagggactaaaaccaaaacgtcagatgtttgcagggaccatttccatatttaa 35026446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 44483403 - 44483233
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||| ||    
T  44483403 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggactaaaaccaaatattctatatttgcagggatta 44483304  T
Q  117 aaa-ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatt 186  Q
    ||| |        |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  44483303 aaatcaaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccatttccatatt 44483233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 22364862 - 22365033
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  22364862 atgaatattatagg-accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 22364960  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |  ||||||||||||||||  ||||||||||  | |||||||||||||||||    
T  22364961 aaaccaaaaaaatatttttataaagactaaaaccaaaatgcaagatatttgcaagaaccatttccatatttaa 22365033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 44219504 - 44219676
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||||||    
T  44219504 atgaatactagagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggccaaaaccaaatattctatttttgcagggacta 44219603  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||||||||| |  |||||||||| ||||| ||||||||||||||    
T  44219604 aaaccaaaaaaatatttttatagggaataaaaccaaaacgcaagatatttgcagggactatttccatatttaa 44219676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 19157866 - 19157696
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19157866 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19157767  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |   ||| | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  19157766 aaaccaaaaaaaaa--attataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 19157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 20757265 - 20757095
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20757265 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 20757166  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |   ||| | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  20757165 aaaccaaaaaaaaa--attataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 20757095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 24566 - 24740
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  24566 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 24665  T
Q  117 aaacc--nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||          |  |||| ||||||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  24666 aaaccaaaaaaaaaaaaatttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccgtatttaa 24740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 40729236 - 40729133
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  40729236 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 40729137  T
Q  117 aaac 120  Q
    ||||    
T  40729136 aaac 40729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 34487315 - 34487143
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||| ||||||||| |||||    
T  34487315 atgaatattatagagaccaatttcaatatgaaatgattttacaacgattaaaacaaaataccaaagacaaaaaccaaatattctatatttgcagagacta 34487216  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | |  |||||||||||| | ||||||||||| || ||||||| |||||||||    
T  34487215 aaaccaaaaaaatatttttataagagctaaaaccaaaacggcagatatttgcaggaaccattttcatatttaa 34487143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 31579641 - 31579745
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||    
T  31579641 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattttatatttgcagggacta 31579740  T
Q  117 aaacc 121  Q
    |||||    
T  31579741 aaacc 31579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 19476567 - 19476394
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||| ||||||| |||||||||| |||||||||||||||    
T  19476567 atgaatattatagggaccaacttcaatatgaaatgattttacaa-gattaaaattaaataccaagaaccaaaaccaaatattctatatttgcagggacta 19476469  T
Q  117 aaac--cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||          |||||||| ||||||||||||||||| | || ||||| || ||||||||||||||||||||    
T  19476468 aaacaaaaaaaaaatatttttatagggactaaaaccaaaacgccaaatattggcagggaccatttccatatttaa 19476394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 42517081 - 42517233
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||||||| |||| ||||| || | |||||||||||||||||||    
T  42517081 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggactaaaatcaaattttttatatttgcagggactaaaac 42517180  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcgggga 173  Q
    |       |||||||||||||||||||||||||||||||||||||||||||||    
T  42517181 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcgggga 42517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 24525 - 24357
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| |||| |||||| | ||| || | |||||||||||||||||||    
T  24525 atattacaaggaccaaatccaatatgaatcaattttacaaggaataaaacaaaatacaaaggtccaaaacccaattttttatatttgcagggactaaaac 24426  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  24425 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgggactattttcatatttaa 24357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 19157938 - 19158075
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||  || | |||||||||||||||||||        |||||||||||||||||||||||    
T  19157938 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 19158037  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  19158038 aaatgtcagatatttgcagggactattttcatatttaa 19158075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 20757337 - 20757474
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||  || | |||||||||||||||||||        |||||||||||||||||||||||    
T  20757337 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 20757436  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  20757437 aaatgtcagatatttgcagggactattttcatatttaa 20757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 44483449 - 44483608
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||| ||||  || | ||||||||||||||||||||       |    
T  44483449 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaat 44483548  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||||| | |||||||||||||| |||| || ||||||    
T  44483549 atttttacagggactaaaaccaaaatgttaaatatttgcggggactattttcacatttaa 44483608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 34595457 - 34595319
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||||||||||| |       |||||||||||||| ||||||||    
T  34595457 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaatatttttacagggattaaaacca 34595358  T
Q  152 aaa-tgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |||||||||||| ||||||| |||| |||||||||    
T  34595357 aaattgtcagatatttacggggactattttcatatttaa 34595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 22954576 - 22954713
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||       |||||||| || || |||||| |    
T  22954576 attttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagagattaaaacta 22954675  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| ||||||||| | || |||||||||| ||||||    
T  22954676 aaatgccagatatttacaggaaccatttccaaatttaa 22954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 40729308 - 40729445
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||| |||||||||||||| | ||| || | ||||||||||||||||||||       |||||||||||||||||||||||    
T  40729308 attttacaaggactaaaacaaaacaccaaggaccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 40729407  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||   ||| |||| |||||||||    
T  40729408 aaatgtcagatatttgcaaagactattttcatatttaa 40729445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 44219463 - 44219295
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| ||||||||||| ||||| || | |||||  |||||||||||     
T  44219463 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttatagggactaaaaa 44219364  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  44219363 caaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 44219295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 19476608 - 19476778
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  19476608 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19476707  T
Q  121 -cnnnnnnntatttttacagggactaaaac-caaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |||||||||||| ||||||||  ||||| ||||||||||||  |||| |||| |||||||||    
T  19476708 aaaaaaaaatatttttacaggaactaaaactaaaaatatcagatatttgcaaggactattttcatatttaa 19476778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 35026658 - 35026825
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||| | || | ||||| ||| |||||||||    
T  35026658 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttacagagactaaaac 35026757  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| | |||||||||||||||||| |||||| | ||||| |||| |||||||||    
T  35026758 caaaaaaatatttttacatgaactaaaaccaaaatgtca-atatttacagggactattttcatatttaa 35026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 22364822 - 22364658
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||| |||||| |||||||||||| |||||||||||  ||||| || | |||||||||||||||||||    
T  22364822 atattacaaggaccaaatccaatatgaatcaattttgcaaggactaaaacaaaatatcaaggaccaaac-caaattttttatatttgcagggactaaaac 22364724  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||   ||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  22364723 caaaaaaaaatt---acagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 22364658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 829926 - 829994
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||| ||||    
T  829926 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 829994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 1195106 - 1195174
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||| ||||    
T  1195106 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 1195174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 31579600 - 31579500
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  |||||||||||||||||||||||| ||| | || | |||||||||||||||||||    
T  31579600 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaac 31579501  T
Q  121 c 121  Q
    |    
T  31579500 c 31579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 22954509 - 22954410
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| |||||||||||| ||||||||| || ||| | || | |||||||||||||||||||    
T  22954509 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccacaaccaatttttttatatttgcagggactaaaac 22954410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 13426386 - 13426326
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||    
T  13426386 tatttttacaggaactaaaaccaaaatgtcagatatttgcagggactattttgatatttaa 13426326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 34487366 - 34487454
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||| ||||| || | |||||| |||||||||||    
T  34487366 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttggagggactaaaa 34487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 827186 - 827099
Alignment:
Q  103 atttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggacca-tttccatatttaa 189  Q
    |||||||||||||||||||       |||||||| |||||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  827186 atttgcagggactaaaacccaaaaaatatttttagagggactagaatcaaaatgtcagatatttgcaaggaccattttccatatttaa 827099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 829197 - 829110
Alignment:
Q  103 atttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggacca-tttccatatttaa 189  Q
    |||||||||||||||||||       |||||||| |||||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  829197 atttgcagggactaaaacccaaaaaatatttttagagggactagaatcaaaatgtcagatatttgcaaggaccattttccatatttaa 829110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 40729145 - 40729093
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  40729145 cagggactaaaacaaaaacgccagatatttgcagggaccatttccatatttaa 40729093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8926360 - 8926188
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  8926360 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 8926261  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  8926260 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccatttccatatttaa 8926188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8936617 - 8936445
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  8936617 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 8936518  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  8936517 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccatttccatatttaa 8936445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 19661559 - 19661731
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19661559 atgaatattatagggaccaatttcaacatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19661658  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  19661659 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 19661731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 31717348 - 31717176
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  31717348 atgaatattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 31717249  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  31717248 aaaccaaaaaaatatttttatagggattaaaaccaaaacgtcaaatatttgcagggaccatttccatatttaa 31717176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 3484957 - 3484784
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3484957 atgaatattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 3484858  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        ||||||||||  ||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  3484857 aaaccaaaaaaaatatttttacacagactaaaaccaaaatgttagatatttgcagggatcatttccatatttaa 3484784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 3345229 - 3345401
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||| |||| ||||    
T  3345229 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatgttctatatttacaggaacta 3345328  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  3345329 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 3345401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 30609076 - 30609248
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||    
T  30609076 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcatggacta 30609175  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||   ||||||||||| |||||||||| |||||||||    
T  30609176 aaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcagggaccattttcatatttaa 30609248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 5924000 - 5923822
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  5924000 atgaatattctagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 5923901  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaaccaaa 194  Q
    |||||        |||||||| ||||||||||||||||| |  |||||||||| |||||||||||||||||||| ||||    
T  5923900 aaaccaaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaagcaaa 5923822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 33783609 - 33783780
Alignment:
Q  19 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  33783609 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 33783708  T
Q  119 acc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||        ||||||||  |||||||||||| ||| | ||||||||||| |||| |||||||||||||||    
T  33783709 accaaaaaaaatatttttagggggactaaaaccgaaacgccagatatttgcagggatcatttccatatttaa 33783780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 17238207 - 17238033
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcaggg--ac 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||  ||    
T  17238207 atgaatattattgggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggatac 17238108  T
Q  115 taaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||        | |||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  17238107 taaaaccaaaaaaaaaattttgcagggactaaaaccaaaatatcagatatttgcagggatcatttccatatttaa 17238033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 28853658 - 28853485
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  28853658 atgaatattatatggaccaatttcaatatgaaatgattttagaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 28853559  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |||||||||||||||||||||||||| | || |||||||  | ||||||||||||||||||    
T  28853558 aaaccaaaaaaaatatttttacagggactaaaaccaaaacgccaaatatttgtagtgaccatttccatatttaa 28853485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 29819559 - 29819455
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  29819559 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 29819460  T
Q  117 aaacc 121  Q
    |||||    
T  29819459 aaacc 29819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17238248 - 17238416
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  17238248 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcagggactaaaac 17238347  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  17238348 caaaaaattatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 17238416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 30609035 - 30608867
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  30609035 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 30608936  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||||||||||||| ||||| ||| |||||||| ||||| |||| |||||||||    
T  30608935 caaaaaaatatttttacagggactaaaactaaaatatcaaatatttgcagggactattttcatatttaa 30608867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 19661518 - 19661351
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   ||||||||| || ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  19661518 atattacaaggaccaaattcaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 19661419  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||  ||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  19661418 c-aaaaaatatttttacagaaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 19661351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 16525366 - 16525197
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| |||||||| | |||||||||||||||    
T  16525366 atgagtattatagagatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagataaaaaccaaatattttatatttgcagggacta 16525267  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |   ||| ||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  16525266 aaaccaaaaaaaaa---ttatagggattaaaagcaaaacgtcagatatttgcagggactatttccatatttaa 16525197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 16525407 - 16525575
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||| ||||||||||| ||||| || | ||||| |||||||||||||    
T  16525407 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaatacgaaggaccaaaaccaaattttttatatttacagggactaaaac 16525506  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||| |||||||| |||||||||||||||||||||| ||| |||| |||||||||    
T  16525507 aaaaaaaatatttttacaaggactaaatccaaaatgtcagatatttgcggagacgattttcatatttaa 16525575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 26272194 - 26272362
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||| |||||||||||||||| ||||| || | |||||||||| ||||||||    
T  26272194 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatataccaaggaccaaaatcaaattttttatatttgcaggaactaaaac 26272293  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| ||||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  26272294 caaaaatatatttttatagggactaaaaccaaaatgtcagatatttacagggactattttcatatttaa 26272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 8926401 - 8926571
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaata--ccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||  | ||||||||||| ||||| || | |||||||||||||||||    
T  8926401 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaa 8926500  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||       |||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  8926501 accaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccgggactattttcatatttaa 8926571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 8936658 - 8936828
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaata--ccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||  | ||||||||||| ||||| || | |||||||||||||||||    
T  8936658 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaa 8936757  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||       |||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  8936758 accaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccgggactattttcatatttaa 8936828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 5404743 - 5404666
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5404743 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 5404666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 3345189 - 3345021
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||| | ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  3345189 atattacaaggaccaaatccaatatgaatcaattttacaagaagtaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 3345090  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||| |||||||||||||||| |||||||| ||| ||||| |||| |||||||||    
T  3345089 gaaaaaaatatttttacaaggactaaaaccaaaatatcagatatctgcagggactattttcatatttaa 3345021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 9571627 - 9571778
Alignment:
Q  38 ttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttac 137  Q
    |||||||||||   |||||||||||| ||||||||||||| ||||| ||||| ||||| ||   ||||||||||||||||||||       |||||||||    
T  9571627 ttcaatatgaatcaattttacaaggactaaaacaaaatacgaaggatcaaaatcaaatttttcatatttgcagggactaaaaccaaaaaaatatttttac 9571726  T
Q  138 agggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| ||||||||||||||||||  |||| |||| |||||||||    
T  9571727 agggactaaaactaaaatgtcagatatttgcaaggactattttcatatttaa 9571778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 3485019 - 3485156
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||||| || | |||||||||||||||||| |       ||||||| |||||||||||||||    
T  3485019 attttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttgcagggactaaaacca 3485118  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| |||||||| ||||| |||| || ||||||    
T  3485119 aaatgtcacatatttgcagggactattttcacatttaa 3485156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 5404815 - 5404952
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||| || |||||||| ||||| || | |||||||||||||||||| |       |||||||| || |||||||||||    
T  5404815 attttacaaggactaaaacaaaatactaatgaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaacca 5404914  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  5404915 aaatgtcagatatttgcagggactattttcatatttaa 5404952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 28853730 - 28853867
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||| |||||||||||| ||||| || | |||||||||| |||||||||       |||||||| ||||||||||||||    
T  28853730 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaaccaaaaaaatatttttatagggactaaaacca 28853829  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||  ||||| |||| ||| |||||    
T  28853830 aaatgtcagatatttgtagggactattttcatgtttaa 28853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 5924072 - 5924210
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnn-tatttttacagggactaaaacc 150  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| || | |||||| ||||||||||||         |||||||||||| |||||||||    
T  5924072 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaacataaaaaaatatttttacaggaactaaaacc 5924171  T
Q  151 aaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||| ||||| |||| |||||||||    
T  5924172 aaaatgtcagatatttgcagggactattttcatatttaa 5924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 5140796 - 5140691
Alignment:
Q  84 ccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccat 183  Q
    |||||| |||||||| | |||||||||||||||||| |       |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  5140796 ccaaaaccaaatattatatatttgcagggactaaaatcaaaaaaatatttttgtagggactaaaaccaaaatgtcagatatttgcagggaccatttccat 5140697  T
Q  184 atttaa 189  Q
    ||||||    
T  5140696 atttaa 5140691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 31717389 - 31717489
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| |  | |||||||||||||||||||    
T  31717389 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 31717488  T
Q  121 c 121  Q
    |    
T  31717489 c 31717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 5409170 - 5409277
Alignment:
Q  82 gaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttcc 181  Q
    |||||||| ||||| || | |||||||||||||||||| |       |||||||| || |||||||||||||||||||||||||||| ||||| |||| |    
T  5409170 gaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaaccaaaatgtcagatatttgcagggactattttc 5409269  T
Q  182 atatttaa 189  Q
    ||||||||    
T  5409270 atatttaa 5409277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 5404661 - 5404601
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  5404661 tatttttatagggactaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 5404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 33783557 - 33783397
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac-cnnnnnnn 128  Q
    ||||||| |||||||||||   ||||||||||||  ||||||||||| |||| ||||||| ||||| || | |||||||| ||||||||||             
T  33783557 ggaccaaattcaatatgaatcaattttacaaggacaaaaacaaaatatcaagaaccaaaaccaaattttttatatttgcaaggactaaaactaaaaaaaa 33783458  T
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| | | |||||||||| |||||||||||| ||||| || | |||||||||    
T  33783457 tatttttacaggaattgaaaccaaaatatcagatatttgcagggactatcttcatatttaa 33783397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 29819468 - 29819416
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  29819468 cagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 29819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 29819631 - 29819736
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||||| || | |||||||  ||||||||| |       | ||||||| | |||||||||||    
T  29819631 attttacaaggactaaaacaaaataccaatgaccaaaaccaaattttttatatttgcttggactaaaatcaaaaaaatgtttttaccgagactaaaacca 29819730  T
Q  152 aaatgt 157  Q
    ||||||    
T  29819731 aaatgt 29819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 31717476 - 31717518
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||    
T  31717476 cagggactaaaaccaaaatttcagatatttgcagggactattt 31717518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 989285 - 989457
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||    
T  989285 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatattctatatctgcagggacta 989384  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  989385 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccatttccatatttaa 989457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13683177 - 13683005
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||||||    
T  13683177 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttacagggacta 13683078  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  13683077 aaaccaaaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagggatcatttccatatttaa 13683005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 5721125 - 5720954
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  5721125 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 5721026  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  5721025 aaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 5720954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 37815514 - 37815342
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  37815514 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 37815415  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  37815414 aaaccaaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 37815342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 22487393 - 22487221
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  22487393 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 22487294  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| | |||||||||||||||   ||||||||||||||||||||||||||||||||    
T  22487293 aaaacaaaaaaatatttttataaggactaaaaccaaaacaccagatatttgcggggaccatttccatatttaa 22487221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 2184604 - 2184774
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  2184604 atgaatattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 2184703  T
Q  117 aaaccnnnnnnntatttttacagg-gactaaaaccaaaatgtcagatatttgcggggaccatttccatatt 186  Q
    |||||       |||||||| |||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  2184704 aaaccaaaaaaatatttttataggacactaaaaccaaaacgtcagatatttgcagggaccatttccatatt 2184774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 16959974 - 16960146
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |||||| ||||||    
T  16959974 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggacta 16960073  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  16960074 aaaccaaaaaaatatttttatagggactaaaaccaaaatgcaagatatttgcagggaccatttccatatttaa 16960146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 17107605 - 17107433
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17107605 atgaatattatagggaccaatttcaatatgaaatgattgtacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 17107506  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||| |||||||||||||| |||| | || |||||| | ||||||||||||||||||||    
T  17107505 aaaccaaaaaaatattttaacagggactaaaactaaaacgccaaatattttcagggaccatttccatatttaa 17107433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 43750120 - 43749948
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  43750120 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 43750021  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| ||||||| |||||   ||||||||||| ||||||||||||||||||||    
T  43750020 aaaccaaaaaaatatttttataggaactaaaatcaaaacaccagatatttgcagggaccatttccatatttaa 43749948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 11021846 - 11021674
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |    
T  11021846 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagggacca 11021747  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | ||||||||||  |||||||||| |||||||||    
T  11021746 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgtagggaccattttcatatttaa 11021674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 9301779 - 9301950
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  9301779 atgaatattatacggaccaatatcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcatggacta 9301878  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| || |||||||| ||||| | |||||||||||  |||||||||||||||||||    
T  9301879 aaaccaaaaaaatatttttatagagactaaaatcaaaacgccagatatttgc-tggaccatttccatatttaa 9301950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 46081584 - 46081756
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||  ||||    
T  46081584 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagaaacta 46081683  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||| | | | ||| ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  46081684 aaacaaaaaatatattctcataaggattaaaaccaaaacgtcagatatttgcgggaaccattttcatatttaa 46081756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 26314685 - 26314857
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||    
T  26314685 atgaatattatatggaccaatttcaatatgaaatgattttacgtggattaaaacaaaataccaaggatctaaaccaaatattctatatttgcagggacta 26314784  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||||||||| | |||||||||||  ||| |||||||||||||||    
T  26314785 aaaccaaaaaaatatttttatagggattaaaaccaaaacgccagatatttgccaggaacatttccatatttaa 26314857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 17865149 - 17865012
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  17865149 atgaatattatagggaccattttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggacta 17865050  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    |||||       |||||||| | |||||||||||||||    
T  17865049 aaaccaaaaaaatatttttatatggactaaaaccaaaa 17865012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 39385371 - 39385544
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||| | |||||||||||||||    
T  39385371 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaagacaaaaaccaaatattttatatttgcagggacta 39385470  T
Q  117 aaac-cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||         |||||||| ||||| ||||| ||||| ||||||||||||  ||||||||||||||||||||    
T  39385471 aaacaaaataatatatttttatagggattaaaagcaaaacgtcagatatttgtagggaccatttccatatttaa 39385544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 16491820 - 16491648
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| ||    
T  16491820 atgaatatcatagggaccaatttcaatatgaaatgattttataaggattaaaataaaataccaaggaccaaaaccaaatattctatatttgcagggatta 16491721  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||||  |||||| ||||||||| |  ||||||||| |||||||||    
T  16491720 aaaccaaaaaaatatttttataggaactaaaattaaaatgccagatatttacaaggaccattttcatatttaa 16491648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 46481090 - 46480986
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  46481090 atgaatattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggacta 46480991  T
Q  117 aaacc 121  Q
    |||||    
T  46480990 aaacc 46480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 12792782 - 12792953
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  12792782 atgaatattatagtgaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 12792881  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||          |   ||| |||||||||||||||||||  ||||||||||  |||||||||||||||||||    
T  12792882 aaataaaaaataaaaaattatagggactaaaaccaaaatgctagatatttgc-aggaccatttccatatttaa 12792953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17865190 - 17865358
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||| |||||||| ||||| || | |||||||||||||||||||    
T  17865190 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaac 17865289  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  17865290 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 17865358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 4712351 - 4712180
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  4712351 atgaatattatagggaccaatttcaatatgaaatgattttataaggatt-aaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 4712253  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    | |||        |   ||| ||| ||||||||||||| | || |||||||| |||||||||| |||||||||    
T  4712252 ataccaaaaaaaaaaaattataggaactaaaaccaaaacgccaaatatttgcagggaccattttcatatttaa 4712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 4712392 - 4712559
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  4712392 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 4712491  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  4712492 c-aaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 4712559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 13493100 - 13493267
Alignment:
Q  23 attatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc- 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||     
T  13493100 attatagggaccaatttcaatatgaaatggttttacaaggattaaaacaaaataccatggatcaaaaccaaatattctatatttgcagggactaaaacca 13493199  T
Q  122 --nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |||||||| |  |||||||||||||| |  | |||||||| ||||||||||||||||||||    
T  13493200 attttattttatttttata--gactaaaaccaaaacgctaaatatttgcagggaccatttccatatttaa 13493267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 32592953 - 32593121
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||   ||||||||  ||||||||| |||||||||||||||    
T  32592953 atgaatattatatgaaccaatatcaatatgaaatgattttataaggattaaaacaaaatacc---gaccaaaactaaatattctatatttgcagggacta 32593049  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       || ||||| | ||| |||||||||||||| |||||||||| || |||||||||||||||||    
T  32593050 aaaccaaaaaatta-ttttataaggattaaaaccaaaatgtaagatatttgctggaaccatttccatatttaa 32593121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 37815555 - 37815724
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| ||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  37815555 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 37815654  T
Q  121 c-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  37815655 caaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgctgggacaattttcatatttaa 37815724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 13493022 - 13492885
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||| | || ||||||||||||||||||||||       |||||||| ||||||||||||||    
T  13493022 attttacaaggaataaaacaaaataccaaagaccaaaaccaatttttttttatttgcagggactaaaaccaaaaaaatatttttagagggactaaaacca 13492923  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| ||||||||||||| ||||| |||| |||||||||    
T  13492922 aaaagtcagatatttgcagggactattttcatatttaa 13492885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 26314611 - 26314477
Alignment:
Q  54 tttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaa 153  Q
    |||||||||| ||||||||||||||||||||||||||||| | || | ||||||||||||||||||||       || ||||||||||||||||||||||    
T  26314611 tttacaaggactaaaacaaaataccaaggaccaaaaacaattttt-tatatttgcagggactaaaaccaaaaaaatagttttacagggactaaaaccaaa 26314513  T
Q  154 atgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||| ||||| |||| || ||||||    
T  26314512 atgtcagatatttgcagggactattttcacatttaa 26314477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 32592912 - 32592744
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||||  || | |||||||||||||||||||    
T  32592912 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaac 32592813  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| |||||||||||||||||||| |||||||| ||||| |||| || ||||||    
T  32592812 caaaaaaatatttttacaaggactaaaaccaaaatgtcaaatatttgcagggactattttcacatttaa 32592744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 12792710 - 12792595
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| || | |||||||||||||||||| |       |||||||||||||||||||||||    
T  12792710 attttacaaggattaaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggactaaaatcaaaaaaatatttttacagggactaaaacca 12792611  T
Q  152 aaatgtcagatatttg 167  Q
    ||||| ||||||||||    
T  12792610 aaatgacagatatttg 12792595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17107646 - 17107813
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||| |||||||| ||||||||||||||||||||||||| ||| | || | ||||||||||||||||||     
T  17107646 atattacaaggaccaaatccaatatgaatcaattctacaaggactaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaat 17107745  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||  |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  17107746 caaaaaaatatttttaca-tgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 17107813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 16959933 - 16959764
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||| |||||||| ||||||||||| ||||| || | |||||||| ||||||||||    
T  16959933 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcatggactaaaac 16959834  T
Q  121 cnnnnnnn-tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||| |||||||||||| |||||||||||||||||| ||||| |||| |||||||||    
T  16959833 caaaaaaaatatttttatagggactaaaactaaaatgtcagatatttgcagggactattttcatatttaa 16959764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 16491892 - 16492028
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||| | || | |||||||| || |||||||        |||||||||||||| ||||||||    
T  16491892 attttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcaagg-ctaaaactaaaaaaatatttttacagggattaaaacca 16491990  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| | ||| |||| |||||||||    
T  16491991 aaatgtcagatatttgcagtgactattttcatatttaa 16492028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 22487434 - 22487600
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| ||   |||||||| ||||||||||    
T  22487434 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttcatatttgcaaggactaaaac 22487533  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |   |||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  22487534 caaaaaaaaa--attacagggactaaaaccaaaatgtcaaatatttgcagggactattttcatatttaa 22487600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 43750161 - 43750259
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||| | ||||||| | ||||||||||  |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||    
T  43750161 atattacaaggaccaaatccaatatgaaacaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 43750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 20045975 - 20045874
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| | |||||||||||||||||| |||||| || ||||||||||||| ||||| ||||||||  ||||||| | |||||||||| ||||    
T  20045975 atgaatattatagaggccaatttcaatatgaaataattttataaagattaaaacaaaacaccaaagaccaaaactaaatattatatatttgcaggaacta 20045876  T
Q  117 aa 118  Q
    ||    
T  20045875 aa 20045874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 11021887 - 11022055
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| || |||||||||||||| |||||||||| ||||| || | |||||| | ||||||||||    
T  11021887 atattacaaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaataccgaggaccaaaatcaaattttttatatttgtaaggactaaaac 11021986  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||| |||||| ||||| |||||||| | | |||||||||| |||||||||    
T  11021987 caaaaaaatatttttacatggattaaaacgaaaatatcagatatgtacagggaccattttcatatttaa 11022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 13683218 - 13683369
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||        ||||||||    
T  13683218 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatat-------aactaaaac 13683310  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    |       |||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  13683311 caaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagggactattt 13683369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 989244 - 989078
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| | ||||||||||| ||||| ||||| ||| | || | ||||| |||| ||||||||    
T  989244 atattacaaggaccaaattcaatatgaatcaattttacaaggactgaaacaaaatac-aaggatcaaaaccaatttttttatatttacagg-actaaaac 989147  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatattt-gcggggaccatttccatatttaa 189  Q
    |       |||||||||||| ||||||||||||||||||||||||| || ||||| |||| |||||||||    
T  989146 caaaaaaatatttttacagg-actaaaaccaaaatgtcagatatttggcagggactattttcatatttaa 989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 42239370 - 42239455
Alignment:
Q  104 tttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||       ||||||||||| ||||||||| |||||||||||||||||| ||||| |||| |||||||||    
T  42239370 tttgcagggactaaaaccaaaaaaatatttttacagagactaaaactaaaatgtcagatatttgcagggactattttcatatttaa 42239455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 2184532 - 2184464
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| ||   |||||||| |||||||||||    
T  2184532 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttaatatttgca-ggactaaaacc 2184464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 6100534 - 6100619
Alignment:
Q  35 aatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    ||||| ||||||||  ||||||| || || |||||||||||||||||||||||||  |||| |||| ||||||||  |||||||||    
T  6100534 aatttaaatatgaatagattttataaagactaaaacaaaataccaaggaccaaaatgaaattttctatatttgcaaagactaaaac 6100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 9301729 - 9301641
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||| | ||||||||| | |||||||||||| |||||||||||  |||||||||||| ||||| || | | |||| |||||||||||    
T  9301729 gaccaaatccaatatgaattaattttacaaggactaaaacaaaatttcaaggaccaaaaccaaattttttatgtttgaagggactaaaa 9301641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 17865008 - 17864948
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| | ||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  17865008 tatttttatatggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 17864948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 46481131 - 46481219
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgca 109  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||||||||| || ||||| || | ||||||||    
T  46481131 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccataaccaaattttttatatttgca 46481219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 39385270 - 39385183
Alignment:
Q  102 tatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||       ||||||||||| || |||| ||||||||||| |||||||  ||||| |||| |||||||||    
T  39385270 tatttgcagggactaaaaccaaaaaaatatttttacagagattaaatccaaaatgtcatatatttggagggacgattttcatatttaa 39385183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 5721197 - 5721265
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaa-caaatattctttatttgcagggactaaaa 119  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||| || | |||||||  |||||||||    
T  5721197 attttacaaggactaaaacaaaataccaatgaccaaaaaccaaattttttatatttgcttggactaaaa 5721265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 20046047 - 20046114
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||| | |||||||||||| |||||||||||| ||||| || | ||||  ||||||||||||    
T  20046047 attttacaagaactaaaacaaaatagcaaggaccaaaaccaaattttttatattgacagggactaaaa 20046114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 46480998 - 46480947
Alignment:
Q  138 agggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| | |||||||||||  ||||||||| |||||||||    
T  46480998 agggactaaaaccaaaacgccagatatttgcaaggaccattttcatatttaa 46480947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 46081487 - 46081449
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttg 167  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  46081487 tatttttatagggactaaaacaaaaatgtcagatatttg 46081449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 2184474 - 2184425
Alignment:
Q  140 ggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||||| | | | |||| |||||||||    
T  2184474 ggactaaaaccaaaatgtcagatatttgcagaggctattttcatatttaa 2184425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 14488126 - 14488171
Alignment:
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggacca 176  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||    
T  14488126 tttttacagggactaaaaccaaaatgagacatatttgcagggacca 14488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 31560634 - 31560679
Alignment:
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggacca 176  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||    
T  31560634 tttttacagggactaaaaccaaaatgagacatatttgcagggacca 31560679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 43750279 - 43750327
Alignment:
Q  141 gactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||| | ||||||||| ||||| |||| |||||||||    
T  43750279 gactaaaaccaaaatgacggatatttgcagggactattttcatatttaa 43750327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 41594161 - 41594333
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| | |||||||||||||||    
T  41594161 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattttatatttgcagggacta 41594260  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41594261 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaa 41594333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 30432805 - 30432977
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||| |||||||||||||||    
T  30432805 atgaatattataagcaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaaagaccaaaaccaaaaattctatatttgcagggacta 30432904  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30432905 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgggaccatttccatatttaa 30432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 3371475 - 3371303
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||    
T  3371475 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaggaacta 3371376  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||    
T  3371375 aaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttacctggaccatttccatatttaa 3371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 14379323 - 14379495
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | |||||| ||||||    
T  14379323 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacaaaaaccaaatattctatttttgcaaggacta 14379422  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  14379423 aaaccaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaa 14379495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 19204765 - 19204593
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19204765 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19204666  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | ||||||||| ||||| |  | |||||||| ||||||||||||||||||||    
T  19204665 aaaccaaaaaaatatttttataaggactaaaatcaaaacgctaaatatttgcagggaccatttccatatttaa 19204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 38873645 - 38873475
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  38873645 atgaatattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggacta 38873546  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       | |||||| ||||||||||||||||| || |||||||||  ||||||||||||||||||||    
T  38873545 aaacc--aaatttttttttatagggactaaaaccaaaacgttagatatttggagggaccatttccatatttaa 38873475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18369223 - 18369394
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  18369223 atgaatattatagggaccaatctcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 18369322  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| || | |||||||||||||||    
T  18369323 aaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaggtatcatttccatatttaa 18369394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 28921366 - 28921195
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  28921366 atgaatattataaagaccagtttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 28921267  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||| |||||||  |||||||||||| ||||||||||||||| ||||    
T  28921266 aaacc-aaaaaatatttttatagggactaataccaaaacatcagatatttgcagggaccatttccatagttaa 28921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 7877537 - 7877707
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  7877537 aatattatagggttcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 7877636  T
Q  120 cc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||        |||||||| |||||||| |||||||| | ||||||||||| |||||||||| |||||||||    
T  7877637 ccaaaaaaaatatttttatagggactagaaccaaaacgccagatatttgcagggaccattttcatatttaa 7877707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 2395330 - 2395158
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||| |||||||||||||||    
T  2395330 atgaatattatagagatcaatttcaatatgaaatgattttacaaggactaaaataaaataccaaggactaaaaccaaatattctatatttgcagggacta 2395231  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||||| | ||||||||||||||||||    
T  2395230 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagtgaccatttccatatttaa 2395158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13572644 - 13572473
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  13572644 atgaatattataagaaccaatttcaacatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaacattctatatttgcagggacta 13572545  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| |||||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  13572544 aaa-caaaaaaatatttttatagggactaaaactaaaacgccagatatttgcagggaccatttccatatttaa 13572473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 29683347 - 29683177
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||||||||| |||    
T  29683347 atgaatattataggg-ccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggcc-aaaccaaatattctatatttgcaggggcta 29683250  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| |||||||||| |||||||||    
T  29683249 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattttcatatttaa 29683177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 3948574 - 3948747
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||||    
T  3948574 atgaatattataatgaccaatttcaatatgaaatgattttacaaggattaaaacaaaatataaaggaccaaaaccaaatattctatatttgcagggacta 3948673  T
Q  117 aaaccnnnnnnntattttta-cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||||||||  |||||||||||| |||| |||||||||||  | |||||||||||||||||||    
T  3948674 aaaccaaaaaaatatttttattagggactaaaactaaaacgtcagatatttatgaggaccatttccatatttaa 3948747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 12806722 - 12806549
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  12806722 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 12806623  T
Q  117 aaac-cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||         |||||||| |||||||||| |||||| | || |||||| |  |||||||||||||||||||    
T  12806622 aaacaaaaaaatatatttttatagggactaaatccaaaacgccaaatatttacaaggaccatttccatatttaa 12806549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33940887 - 33941058
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  33940887 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 33940986  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||| ||||||||| | | | ||||| ||||||||||||    
T  33940987 aaaccaaaaaaatatttttaaagggactaaagccaaaacgtcagatatatccagagacca-ttccatatttaa 33941058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 25318518 - 25318676
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| || |||||||| |       ||    
T  25318518 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgtagagactaaaatcaaaaaaata 25318617  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||| ||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  25318618 tttttagagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 25318676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 37609166 - 37609337
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaa-caaaataccaaggaccaaaaacaaatattctttatttgcagggact 115  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||||| |||||||||| ||||||||||||||    
T  37609166 atgaatattatagg-accaatttcaatatgaaat-attttacaaggattaaaaactaaaaaccaaggaccaaaaccaaatattctatatttgcagggact 37609263  T
Q  116 aaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||       |||||||| ||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  37609264 aaaaccaaaaaaatatttttagagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 37609337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 6164108 - 6164280
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||    
T  6164108 atgaatattataaggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgctgggacta 6164207  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||| ||||| | |||||||| || ||| |||| |||||||||||    
T  6164208 aaaccaaaaaaatatttttatagggattaaaatcaaaacgccagatattagcaggggccatatccatatttaa 6164280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 6880183 - 6880355
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  6880183 atgaatattatggggaccaatttcaatacgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 6880282  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | |||||||| |||||| | |||||||||   ||||| ||||||||||||||    
T  6880283 aaaccaaaaaaatatttttataaggactaaatccaaaacgccagatatttatagggactatttccatatttaa 6880355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 17457928 - 17458100
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||| || ||    
T  17457928 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattttatatttgcagagatta 17458027  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||| ||||    |||||||||| || ||||||| |||||||||    
T  17458028 aaaccaaaaaaatatttttatagggactaaaacgaaaacactagatatttgcaggaaccattttcatatttaa 17458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 4171698 - 4171597
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||    
T  4171698 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatgttctatatttgcagggacta 4171599  T
Q  117 aa 118  Q
    ||    
T  4171598 aa 4171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 29683419 - 29683556
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       |||||||||||||||||||| ||    
T  29683419 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaatca 29683518  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  29683519 aaatgtcagatatttgcagggactatttccatatttaa 29683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 32521648 - 32521475
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| | ||||| || ||||||    
T  32521648 atgaatattataaggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaagaccaaaaccaaatattttatatttacaaggacta 32521549  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |||||||| | ||||||||||||||| |||| |||||| | || |||||||||||||||||    
T  32521548 aaaccaaaaaaaatatttttagaaggactaaaaccaaaacgtcatatatttaccggaaccatttccatatttaa 32521475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18369182 - 18369014
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||| ||||| || | |||||||||||||||||||    
T  18369182 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaac 18369083  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  18369082 ccaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 18369014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 10748704 - 10748808
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| | |||||||    
T  10748704 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttactgggacta 10748803  T
Q  117 aaacc 121  Q
    |||||    
T  10748804 aaacc 10748808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 30771241 - 30771149
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  30771241 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgca 30771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 4171739 - 4171907
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| || | ||||||| |||||||||||    
T  4171739 atattacaaggaccaaatccaatatgaattaattttacaaggattaaaacaaattaccaaggaccaaaaccaaattttttatatttgctgggactaaaac 4171838  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||| | |||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  4171839 caaaaaaatatttttaccgagactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 4171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 28921407 - 28921575
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||||| || | |||||||||||||||||||    
T  28921407 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaac 28921506  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||| |||||||||||||||| |||||||| ||||| |||| |||||||||    
T  28921507 caaaaaaatatttttacagggattaaaaccaaaatgtcatatatttgcagggactattttcatatttaa 28921575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 12806773 - 12806931
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||||       ||    
T  12806773 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaata 12806872  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||| |||| |||||||||    
T  12806873 tttttacggggactaaaaccaaaatgttagatatttgcagggacaattttcatatttaa 12806931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 2395371 - 2395539
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| | |||||||||| |||||||||||| ||||| || | |||||||||||| ||||||    
T  2395371 atattacaaggaccaaatccaatatgaatcaattttacaaggacttaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggattaaaac 2395470  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  2395471 aaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 2395539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 10748663 - 10748495
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||| ||||||||||||||| ||||| || | |||||||||||| ||||||    
T  10748663 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaagtaccaaggaccaaaaccaaattttttatatttgcagggattaaaac 10748564  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||| ||||| | ||| |||| |||||||||    
T  10748563 caaaaaaatatttttacagggactaaaaccaaaatgtcagatgtttgcagagactattttcatatttaa 10748495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 42705166 - 42705334
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||||| |||||| ||||| || | ||||||||  |||||||||    
T  42705166 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggtccaaaaccaaattttttatatttgcactgactaaaac 42705265  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||| ||||||| |||||||||||||||||||| ||||| |||| |||||||||    
T  42705266 caaaaaaatatttttacagagactaaatccaaaatgtcagatatttgcagggactattttcatatttaa 42705334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 14379272 - 14379114
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| |||| |||||||| ||||||||||| ||||| || |  |||||||||||||||||||       ||    
T  14379272 gaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaaccaaaaaaata 14379173  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||    
T  14379172 tttttacagggactaaaaccaaaatgtcagatatttgcaaggactattttcatatttaa 14379114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 42705125 - 42705052
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaa 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42705125 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaaa 42705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 41594089 - 41593952
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||| || |||||||||||| |||||||||||| ||||| |||| |||||||||| |||||||||       |||||||||||||||||||||||    
T  41594089 attttacaaagactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaaccaaaaaaatatttttacagggactaaaacca 41593990  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| || || |||| || ||||||    
T  41593989 aaatatcagatatttgcaggaactattttcacatttaa 41593952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 3948533 - 3948365
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||| ||||| || | |||||||||||||||||||    
T  3948533 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttgcagggactaaaac 3948434  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| |||||||||||  |||||||||| |||||||  |||| |||| |||||||||    
T  3948433 caaaaaaatatttttatagggactaaaattaaaatgtcaggtatttgcatggactattttcatatttaa 3948365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 30432764 - 30432597
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| ||  || ||| ||||||||||||     
T  30432764 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttgtt-tttacagggactaaaat 30432666  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       || ||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  30432665 caaaaaaatacttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 30432597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 7877493 - 7877324
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  7877493 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 7877394  T
Q  121 c-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||||||| |||| || ||||||||  ||||||||| ||||| |||| |||||||||    
T  7877393 caaaaaaaatatttttacaggaactacaatcaaaatgtatgatatttgcagggactattttcatatttaa 7877324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 33940819 - 33940682
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||| || | |||||||||| ||||||||        |||||||||||||||||||| ||    
T  33940819 attttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaactaaaaaaatatttttacagggactaaaatca 33940720  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||| |||||||||| ||||| |||| |||||||||    
T  33940719 aaatgtaagatatttgcagggactattttcatatttaa 33940682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 3371547 - 3371684
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||| || | |||||||||||||||||||        ||||||||| |||||||||||||    
T  3371547 attttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaactaaaaaaatatttttactgggactaaaacca 3371646  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||  ||||| | | ||| |||| |||||||||    
T  3371647 aaatgtcacgtatttactgagacaattttcatatttaa 3371684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 6880142 - 6880042
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||| ||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  6880142 atattataaggaccaaatccaatatgaataaattttacatggactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 6880043  T
Q  121 c 121  Q
    |    
T  6880042 c 6880042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 19204838 - 19204975
Alignment:
Q  53 ttttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa-ccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||          |||||||||| ||||||||||||    
T  19204838 ttttacaagtattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaaatatttttacaaggactaaaacca 19204937  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| | ||||||| | ||||| |||| |||||||||    
T  19204938 aaatgacggatatttacagggactattttcatatttaa 19204975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 13572685 - 13572853
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||| |||| |||  |||||| ||||| || | ||||||| |||||||||||    
T  13572685 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatatacaaagtgccaaaatcaaattttttatatttgctgggactaaaac 13572784  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||| |||||||||||||||| ||||||||  | || |||| |||||||||    
T  13572785 caaaaaaatatttttacagggattaaaaccaaaatgtcatatatttgcaagaactattttcatatttaa 13572853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 37609125 - 37608958
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  |||||||||||||||||||||||| ||||| || | |||||||| ||||||||      
T  37609125 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaca 37609026  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||| ||| |||||||||||||||||||||| ||||| |||||  ||| |||||||||    
T  37609025 caaaaaattatttttccagtgactaaaaccaaaatgtcagat-tttgcagggacttttttcatatttaa 37608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 17457887 - 17457729
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| | |||||||||||| |||||||||||| |||||||||||| | ||| || | |||||||||| |||||||     
T  17457887 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggaccaaaacctaattttttatatttgcaggaactaaaat 17457788  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
            | |||||||||| |||||||||||||| ||| |||||||| ||||| ||||    
T  17457787 aaattttttttttttacaggaactaaaaccaaaatttcaaatatttgcagggactattt 17457729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 32521706 - 32521837
Alignment:
Q  38 ttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac-cnnnnnnntattttta 136  Q
    |||||||||||   ||||||||||||  ||||||||||| |||||||||||| ||||| || | |||||||||||| ||||||         ||||||||    
T  32521706 ttcaatatgaatcaattttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggattaaaactaaaaaaaatattttta 32521805  T
Q  137 cagggactaaaaccaaaatgtcagatatttgc 168  Q
    |||||||||||||||||||||||  |||||||    
T  32521806 cagggactaaaaccaaaatgtcaattatttgc 32521837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 6164056 - 6163969
Alignment:
Q  32 accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||| |||||||||||   |||||||||||| |||||||||||||||||||||||||  |||| || | ||||||||| ||| ||||    
T  6164056 accaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaactaaattttttatatttgcagagacaaaaa 6163969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 6880055 - 6880003
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  6880055 cagggactaaaaccaaaatgtcagatatttgtagggacaattttcatatttaa 6880003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 13278110 - 13278065
Alignment:
Q  145 aaaaccaaaatgtcagatatttgc-ggggaccatttccatatttaa 189  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  13278110 aaaaccaaaacgtcagatatttgcaggggaccatttccatatttaa 13278065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18910050 - 18910106
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaa 74  Q
    |||| |||||||  ||||||||| ||||| ||||||||||| ||||||||||||||||    
T  18910050 atgattattataaagaccaattt-aatattaaatgattttataaggattaaaacaaaa 18910106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 26239075 - 26239116
Alignment:
Q  78 caaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||||||||| || ||| ||||||||||||||||    
T  26239075 caaggaccaaaaacaaattttttttttttgcagggactaaaa 26239116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 25318485 - 25318417
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||| | ||||||| |||||||||||   |||||| |||||  ||||||||||| ||||||||||||    
T  25318485 atattacaaggaccaaattcaatatgaatcaattttataaggacaaaaacaaaatatcaaggaccaaaa 25318417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 4156 - 3984
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||    
T  4156 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttctatatttacagggacta 4057  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  4056 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 3984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 4227 - 4364
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       |||||||||||||||||||||||    
T  4227 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 4326  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  4327 aaatgtcagatatttgcagggactattttcatatttaa 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 116; Significance: 8e-59; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 212622 - 212794
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||||||||    
T  212622 atgaatattataggaaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaagaccaaaaccaaatattctatatttgcagggacta 212721  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  212722 aaaccaaaaaaatatttttatagggactaaaaccaaaacatcagatatttacggggaccatttccatatttaa 212794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 212581 - 212413
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||  || || ||||||||||||| ||||    
T  212581 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttaatttgcagggacttaaac 212482  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  212481 caaaaaaatatttttacagggactaaaaccaaaatgtctgatatttgcggggactattttcatatttaa 212413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 4597 - 4769
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  4597 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggacta 4696  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |  |||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  4697 aaaccaaaaaaaaaaatttatagggactaaaaccaaaacgtcaaatatttgcagggaccatttccatatttaa 4769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 25296 - 25124
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||    
T  25296 atgaatattataggaaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaaccaaatattctatatttacagggacta 25197  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| |||| ||||||   |||||||||| |||||||||    
T  25196 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtcaaatatttattgggaccattttcatatttaa 25124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 25356 - 25458
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| ||| || |||||||||||||||||||       |||||||||||||||||||||||    
T  25356 attttacaaggactaaaataaaataccaaggaccaaaaccaaaaatttttaatttgcagggactaaaaccaaaaaattatttttacagggactaaaacca 25455  T
Q  152 aaa 154  Q
    |||    
T  25456 aaa 25458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 25459 - 25518
Alignment:
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  25459 atttttacagggactaaaaccaaaatatcagatatttgcggggactattttcatatttaa 25518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 8752 - 8922
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  8752 atgaatattttagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 8851  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatattt 187  Q
    ||||        |||||||| |||||||||| |||||| | || |||| | ||||||||||||||||||||    
T  8852 aaacaaaaaaaatatttttatagggactaaatccaaaacgccaaatatatacggggaccatttccatattt 8922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 8680 - 8542
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggact-aaaacc 150  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       |||||||||||||||| ||||||    
T  8680 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaacc 8581  T
Q  151 aaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||| |||||||||| ||||| |||| |||||||||    
T  8580 aaaatgttagatatttgcagggacaattttcatatttaa 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 43487 - 43660
Alignment:
Q  17 atgaatattataggg-accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggact 115  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  43487 atgaatattataggggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggact 43586  T
Q  116 aaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||        |  |||| ||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  43587 aaaaccaaaaaaaaaaatttataggaactaaaaccaaaacgccagatatttgcaagaaccatttccatatttaa 43660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 43446 - 43278
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||| | ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  43446 atattacaaggaccaaatccaatatgaatcaattttacaagtactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 43347  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            ||||||||||||||||||||||||||||||| |||||||| ||||| |||| || ||||||    
T  43346 aaaaaatatatttttacagggactaaaaccaaaatgtcaaatatttgcagggactattttcacatttaa 43278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 36204 - 36375
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||    
T  36204 atgaatattataaggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcaggaacta 36303  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       || ||||| |||||||||||| |||| ||||||||||||| ||||| ||||  ||||||||    
T  36304 aaa-caaaaaaataattttatagggactaaaactaaaacgtcagatatttgcagggactatttttatatttaa 36375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 36132 - 35993
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||| ||| |||||||| ||||| || | |||||||| |||||||||||       |||| |||||  ||  ||||| |    
T  36132 attttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgcaaggactaaaaccaaaacaatattcttacaaagatcaaaacga 36033  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaacc 191  Q
    ||||||||||||||||| || || || | |||||||||||    
T  36032 aaatgtcagatatttgcaggaactatattcatatttaacc 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 118198 - 118030
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||  ||||||||| ||||||||||||||||||    
T  118198 aatattatagggaccaatttcaatatgaaatgactttaca-ggattaaaacaaaatacaaaggatcaaaattaaatattctatatttgcagggactaaaa 118100  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||       ||||| ||  ||||||||| |||||| | ||||||||| | ||||||||||||||||||||    
T  118099 ccaaaaaaatatttatatggggactaaatccaaaacgccagatatttacagggaccatttccatatttaa 118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 118277 - 118393
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||||       ||||||||||||||| |||||||    
T  118277 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacagggacgaaaacca 118376  T
Q  152 aaatgtcagatatttgc 168  Q
    |||| ||||||||||||    
T  118377 aaatatcagatatttgc 118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 36934 - 36768
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  36934 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 36835  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||  |||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  36834 caaaaaaatatttt--cagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 36768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 36975 - 37052
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36975 atgaatattatagggaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 37052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 37057 - 37117
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  37057 tatttttatagggactaaaaccaaaacgctagatatttgcagggaccatttccatatttaa 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 74088 - 74007
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatatt 98  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  74088 atgaatattatagggaccagttttaatatgaaatgattttataaggattaaaacaaaatacgaaggaccaaaaccaaatatt 74007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 74137 - 74295
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||  ||||| || | ||||||||||||||||||||       |    
T  74137 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaagccaaattttttatatttgcagggactaaaaccaaaaaaat 74236  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||  | ||||| |||||||||||| |||||||||| ||||| |||| |||||||||    
T  74237 attttttgaaggact-aaaccaaaatgttagatatttgcagggactattttcatatttaa 74295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 73994 - 73934
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| ||||| ||||||||||| | | ||||||||| ||||||||||||||||||||    
T  73994 tatttttatagggaataaaaccaaaacgccggatatttgcagggaccatttccatatttaa 73934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 43971 - 43911
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| | ||||||||||||||| | ||||||||||| ||||| ||||||||||||||    
T  43971 tatttttataaggactaaaaccaaaacgacagatatttgccgggactatttccatatttaa 43911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 43994 - 44050
Alignment:
Q  133 tttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||  ||||||||    
T  43994 tttacagggactaaaaccaaaatgtcaaatatttgcagggactatttttatatttaa 44050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 11348 - 11299
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaa 69  Q
    |||||| ||| |||||||||| |||||||||||||| ||||||| |||||    
T  11348 aatattgtagagaccaatttcgatatgaaatgatttcacaaggactaaaa 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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