View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_high_34 (Length: 277)
Name: NF4586_high_34
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_high_34 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 43086277 - 43086535
Alignment:
| Q |
1 |
agcaacaaatcatacagaacatttaattataacaaaaaatcatacnnnnnnnnggttgaattgaagctaattgaacaaaagggttagtaattactaatta |
100 |
Q |
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|||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43086277 |
agcaacaaatcatacaaaacatttaattataacaaaaaataatacaaaaaaaaggttgaattgaagctaattgaacaaaagggttagtaattactaatta |
43086376 |
T |
|
| Q |
101 |
acatgtttatgattatgaatgaataaataaaagagcataaatagaataaattaccaaaaatgaaatggagtgaactcatgagggctttgttgcaaataac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43086377 |
acatgtttatgattatgaatgaataaataaaagagcataaatagaataaattaccaaaaatgaaatggagtgaactcatgagggctttgttgcaaataac |
43086476 |
T |
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| Q |
201 |
aatggagacagaagacaccacagaaagagataaagctcccactgttcccagctgaaaac |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43086477 |
aatggagacagaagacaccacagaaagagataaagctcccactgttcccagctgaaaac |
43086535 |
T |
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