View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_high_35 (Length: 272)
Name: NF4586_high_35
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_high_35 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 12630397 - 12630633
Alignment:
| Q |
19 |
gtattcttgttcattgatcgcgattttttatgtcttcattctaaaattacaatgcttaattactccattgcagtttgtgataaccactggaagtggtgtt |
118 |
Q |
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| T |
12630397 |
gtattcttgttcattgatcgcgattttttatgtcttcattctaaaattacaatgcttaattactccattgcagtttgtgataaccactggaagtggtgtt |
12630496 |
T |
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| Q |
119 |
aatggtttcacccttgacccttctcttggcgagtttatcctaactcaccctgacattaaggtaatactctgctaacttgtggatcactattatatattat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12630497 |
aatggtttcacccttgacccttctcttggcgagtttatcctaactcaccctgacattaaggtaatactctgctaacttgtggatcactattatatattat |
12630596 |
T |
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| Q |
219 |
ttttctctctggatatgattacctgcctgtctgttca |
255 |
Q |
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| T |
12630597 |
ttttctctctggatatgattacctgcctgcctgttca |
12630633 |
T |
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