View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_high_44 (Length: 252)
Name: NF4586_high_44
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34974706 - 34974493
Alignment:
| Q |
1 |
ctgttaaaaaacgagctacacatcatctataggggcaatcaaacagtattagtataatccaacagtacactccttgttattctttaatattttgcgacga |
100 |
Q |
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|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
34974706 |
ctgttaaaaaacgagctacacatcatctgtaggggtaatcaaacagtattagtataatcaaacagtacactccttgttattctttaatattttgcgacga |
34974607 |
T |
|
| Q |
101 |
gctaaccaagtttattcacgtgatttaggtaagaattttgcttatcgataaaagtaactaaacaatactaattagttatgtattagatgtagttagtgta |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34974606 |
gctaaccaagtttattcacgtgacttaggtaagaattttgcttatcgataaaagtaactaaacaatactaattagttatgtattagatgtagttagtgta |
34974507 |
T |
|
| Q |
201 |
ccaaaacaaattat |
214 |
Q |
| |
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|||||||||||||| |
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| T |
34974506 |
ccaaaacaaattat |
34974493 |
T |
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