View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_high_48 (Length: 247)
Name: NF4586_high_48
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_high_48 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 35425285 - 35425515
Alignment:
| Q |
1 |
gcatgttagtagatttctacaactacaaagaccttctcagcagcccaaggggataacagattccagcttgatctttagttatgttgtcagcttgcaacct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35425285 |
gcatgttagtagatttctacaactacaaagaccttctcagccgcccaaggggataacagattccagcttgatctttagttatgttgtcagcttgcaacct |
35425384 |
T |
|
| Q |
101 |
ttgcaacctttctctgttcaatttgaccagatagtggacactgcatctcagtccaacttattggaaccaaagttgcacctaaatacagaaagtacaacag |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35425385 |
ttgcaacctttctttgttcaatttgaccagatagtggacactgcatctcagtccaacttattggaaccaaagttgcacctaaatacagaaagtacaacag |
35425484 |
T |
|
| Q |
201 |
gttgaggcacagatgaatttgaccatatata |
231 |
Q |
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||||||||||| |||||||||| |||||||| |
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| T |
35425485 |
gttgaggcacaaatgaatttgaacatatata |
35425515 |
T |
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