View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_high_50 (Length: 245)
Name: NF4586_high_50
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_high_50 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 9909627 - 9909800
Alignment:
| Q |
9 |
ttgagatcctttgctttctataaatgagttatagtattttatcttttaaagatgcttatattactcttcatacactaggttcgtagattaagggcaagaa |
108 |
Q |
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| T |
9909627 |
ttgagatcctttgctttctataaatgagttatagtattttatcttttaaagatgcttatattactcttcatacactaggttcgtagattaagggcaagaa |
9909726 |
T |
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| Q |
109 |
gattttgtttgacatcgttttcacaataaggttcaaaacatttgttcttcgatatattatccttttaattctcg |
182 |
Q |
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| T |
9909727 |
gattttgtttgacatcgttttcacaataaggttcaaaacatttgttcttcgatatattatccttttaattctcg |
9909800 |
T |
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Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 9909848 - 9909892
Alignment:
| Q |
182 |
gattttcatccattttttatccagcttttgtgatttgtagaaaca |
226 |
Q |
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| T |
9909848 |
gattttcatccattttttatccagcttttgtgatttgtagaaaca |
9909892 |
T |
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