View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_high_56 (Length: 237)
Name: NF4586_high_56
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_high_56 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 52182471 - 52182250
Alignment:
| Q |
1 |
aaaataacgaaagaaatccttaattaattaacctgccacacgccacgttctctgtgctgcataaccgaaaagaaaatatacaagatagaaatataattga |
100 |
Q |
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||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
52182471 |
aaaataacgaaagaaatccttaattaatttaactgccacactccacgttctctgtgctgcgcaaccgaaaagaaaatatacaagatagaaatataattga |
52182372 |
T |
|
| Q |
101 |
gaaagattagtggtagtagagcacgtaattaaaggcactagtgcactaagcattgagggggcgtttaatttttcaggaactttacttgaaccacgttctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
52182371 |
gaaagattagtggtagtagagcacgtaattaaaggcactagtgcactaagcattgagggggcgtttaatttttcaggaactttacttgacccacgttctt |
52182272 |
T |
|
| Q |
201 |
gcaattttaacccgtgatatat |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
52182271 |
gcaattttaacccgtgatatat |
52182250 |
T |
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