View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4586_low_10 (Length: 463)

Name: NF4586_low_10
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4586_low_10
NF4586_low_10
[»] chr3 (37 HSPs)
chr3 (17-446)||(32315586-32316013)
chr3 (17-189)||(26582822-26582994)
chr3 (17-189)||(14546046-14546218)
chr3 (17-189)||(27934452-27934624)
chr3 (17-189)||(52835546-52835718)
chr3 (17-189)||(49499844-49500016)
chr3 (25-189)||(27284971-27285135)
chr3 (17-189)||(33162530-33162702)
chr3 (17-189)||(46962792-46962964)
chr3 (17-189)||(16056350-16056521)
chr3 (17-189)||(29838504-29838676)
chr3 (17-189)||(38807539-38807711)
chr3 (17-189)||(42093605-42093776)
chr3 (17-189)||(50645473-50645645)
chr3 (18-189)||(7029386-7029557)
chr3 (18-189)||(49121716-49121888)
chr3 (21-189)||(21323101-21323270)
chr3 (17-189)||(55092206-55092380)
chr3 (52-189)||(49500088-49500225)
chr3 (21-189)||(17109852-17110020)
chr3 (53-189)||(32315377-32315513)
chr3 (52-189)||(46962583-46962720)
chr3 (21-189)||(50645686-50645854)
chr3 (52-189)||(29838295-29838432)
chr3 (52-189)||(55092452-55092589)
chr3 (31-179)||(26582624-26582771)
chr3 (21-189)||(38807752-38807920)
chr3 (21-189)||(33162325-33162489)
chr3 (30-165)||(42093420-42093555)
chr3 (52-189)||(14545836-14545974)
chr3 (52-189)||(27934696-27934833)
chr3 (17-105)||(17110061-17110149)
chr3 (21-189)||(52835759-52835927)
chr3 (21-154)||(889164-889297)
chr3 (21-120)||(27285183-27285282)
chr3 (129-189)||(19590439-19590499)
chr3 (140-189)||(17109748-17109797)
[»] chr1 (38 HSPs)
chr1 (17-189)||(26244550-26244722)
chr1 (17-189)||(20062008-20062180)
chr1 (17-189)||(50096134-50096306)
chr1 (17-189)||(14602011-14602183)
chr1 (17-189)||(50624767-50624939)
chr1 (17-189)||(33558-33730)
chr1 (17-189)||(28031648-28031820)
chr1 (17-189)||(33619106-33619278)
chr1 (22-189)||(18963610-18963777)
chr1 (17-189)||(12322093-12322265)
chr1 (17-189)||(43191866-43192038)
chr1 (17-189)||(47828964-47829135)
chr1 (17-189)||(37172458-37172630)
chr1 (17-189)||(10913776-10913947)
chr1 (17-179)||(39288364-39288527)
chr1 (17-121)||(42154819-42154923)
chr1 (21-189)||(20061799-20061967)
chr1 (21-189)||(28031861-28032029)
chr1 (21-189)||(50096347-50096515)
chr1 (31-189)||(43191657-43191815)
chr1 (21-189)||(37172249-37172417)
chr1 (52-189)||(50625011-50625146)
chr1 (64-189)||(39027482-39027607)
chr1 (21-161)||(10913988-10914128)
chr1 (21-189)||(26244763-26244931)
chr1 (20-189)||(42154963-42155131)
chr1 (52-167)||(33802-33917)
chr1 (52-189)||(12322337-12322476)
chr1 (21-189)||(47829176-47829342)
chr1 (20-189)||(14602223-14602390)
chr1 (31-189)||(39288153-39288313)
chr1 (91-189)||(50616940-50617038)
chr1 (68-189)||(39027606-39027727)
chr1 (21-110)||(33618976-33619065)
chr1 (43-83)||(51999582-51999622)
chr1 (17-89)||(29584494-29584566)
chr1 (137-189)||(42154781-42154832)
chr1 (20-48)||(52490079-52490107)
[»] chr5 (35 HSPs)
chr5 (19-189)||(3598414-3598584)
chr5 (17-189)||(24491053-24491225)
chr5 (17-189)||(10461555-10461727)
chr5 (17-189)||(18786191-18786362)
chr5 (20-189)||(43197114-43197283)
chr5 (17-189)||(6542469-6542640)
chr5 (17-189)||(15969431-15969603)
chr5 (17-189)||(4122787-4122959)
chr5 (17-189)||(5933335-5933507)
chr5 (20-189)||(14868678-14868843)
chr5 (17-189)||(41137142-41137314)
chr5 (17-189)||(6497193-6497365)
chr5 (17-189)||(22394334-22394506)
chr5 (17-189)||(29991105-29991275)
chr5 (21-189)||(22394125-22394293)
chr5 (18-189)||(40588861-40589031)
chr5 (52-189)||(3598658-3598795)
chr5 (21-189)||(6497406-6497574)
chr5 (21-189)||(14868887-14869054)
chr5 (21-189)||(18785983-18786150)
chr5 (30-189)||(24490845-24491003)
chr5 (35-189)||(40589481-40589634)
chr5 (52-189)||(6542260-6542397)
chr5 (17-189)||(7133127-7133298)
chr5 (52-189)||(43196902-43197039)
chr5 (21-189)||(4122580-4122746)
chr5 (52-189)||(10461346-10461483)
chr5 (52-189)||(25329098-25329235)
chr5 (21-189)||(5933126-5933294)
chr5 (21-157)||(15969644-15969780)
chr5 (21-121)||(7133339-7133439)
chr5 (30-119)||(29991325-29991414)
chr5 (52-94)||(41137386-41137428)
chr5 (17-74)||(16416075-16416132)
chr5 (20-48)||(24640660-24640688)
[»] chr8 (40 HSPs)
chr8 (17-189)||(13154240-13154412)
chr8 (17-189)||(6943658-6943830)
chr8 (17-186)||(26479504-26479673)
chr8 (17-188)||(31685672-31685843)
chr8 (17-189)||(220514-220685)
chr8 (17-189)||(689669-689840)
chr8 (17-189)||(734137-734308)
chr8 (17-189)||(858033-858204)
chr8 (17-189)||(9180046-9180218)
chr8 (17-189)||(18764495-18764667)
chr8 (17-189)||(31186375-31186546)
chr8 (17-189)||(31403123-31403295)
chr8 (17-189)||(24332262-24332435)
chr8 (20-189)||(6891780-6891948)
chr8 (17-189)||(2835126-2835298)
chr8 (17-189)||(13405449-13405621)
chr8 (17-189)||(37586227-37586398)
chr8 (17-94)||(3272816-3272893)
chr8 (31-189)||(3272944-3273102)
chr8 (21-189)||(6943871-6944039)
chr8 (21-189)||(13154453-13154621)
chr8 (22-173)||(9180260-9180411)
chr8 (21-168)||(13405662-13405809)
chr8 (55-189)||(2835342-2835475)
chr8 (21-189)||(18764286-18764454)
chr8 (21-189)||(31402913-31403082)
chr8 (21-189)||(24332476-24332640)
chr8 (55-189)||(26479327-26479460)
chr8 (20-89)||(27993490-27993559)
chr8 (20-89)||(28050792-28050861)
chr8 (52-121)||(31685916-31685985)
chr8 (21-121)||(31186587-31186687)
chr8 (133-189)||(31186670-31186726)
chr8 (32-72)||(20112533-20112573)
chr8 (130-189)||(3272750-3272809)
chr8 (39-89)||(37586119-37586169)
chr8 (129-166)||(6892070-6892107)
chr8 (52-94)||(6892023-6892065)
chr8 (129-189)||(20112427-20112483)
chr8 (137-167)||(31685972-31686002)
[»] chr7 (35 HSPs)
chr7 (17-189)||(13426502-13426674)
chr7 (17-189)||(42516868-42517040)
chr7 (17-189)||(34595529-34595701)
chr7 (17-189)||(35026446-35026617)
chr7 (17-186)||(44483233-44483403)
chr7 (17-189)||(22364862-22365033)
chr7 (17-189)||(44219504-44219676)
chr7 (17-189)||(19157696-19157866)
chr7 (17-189)||(20757095-20757265)
chr7 (17-189)||(24566-24740)
chr7 (17-120)||(40729133-40729236)
chr7 (17-189)||(34487143-34487315)
chr7 (17-121)||(31579641-31579745)
chr7 (17-189)||(19476394-19476567)
chr7 (21-173)||(42517081-42517233)
chr7 (21-189)||(24357-24525)
chr7 (52-189)||(19157938-19158075)
chr7 (52-189)||(20757337-20757474)
chr7 (30-189)||(44483449-44483608)
chr7 (52-189)||(34595319-34595457)
chr7 (52-189)||(22954576-22954713)
chr7 (52-189)||(40729308-40729445)
chr7 (21-189)||(44219295-44219463)
chr7 (21-189)||(19476608-19476778)
chr7 (21-189)||(35026658-35026825)
chr7 (21-189)||(22364658-22364822)
chr7 (52-120)||(829926-829994)
chr7 (52-120)||(1195106-1195174)
chr7 (21-121)||(31579500-31579600)
chr7 (21-120)||(22954410-22954509)
chr7 (129-189)||(13426326-13426386)
chr7 (31-119)||(34487366-34487454)
chr7 (103-189)||(827099-827186)
chr7 (103-189)||(829110-829197)
chr7 (137-189)||(40729093-40729145)
[»] chr6 (35 HSPs)
chr6 (17-189)||(8926188-8926360)
chr6 (17-189)||(8936445-8936617)
chr6 (17-189)||(19661559-19661731)
chr6 (17-189)||(31717176-31717348)
chr6 (17-189)||(3484784-3484957)
chr6 (17-189)||(3345229-3345401)
chr6 (17-189)||(30609076-30609248)
chr6 (17-194)||(5923822-5924000)
chr6 (19-189)||(33783609-33783780)
chr6 (17-189)||(17238033-17238207)
chr6 (17-189)||(28853485-28853658)
chr6 (17-121)||(29819455-29819559)
chr6 (21-189)||(17238248-17238416)
chr6 (21-189)||(30608867-30609035)
chr6 (21-189)||(19661351-19661518)
chr6 (17-189)||(16525197-16525366)
chr6 (21-189)||(16525407-16525575)
chr6 (21-189)||(26272194-26272362)
chr6 (21-189)||(8926401-8926571)
chr6 (21-189)||(8936658-8936828)
chr6 (17-94)||(5404666-5404743)
chr6 (21-189)||(3345021-3345189)
chr6 (38-189)||(9571627-9571778)
chr6 (52-189)||(3485019-3485156)
chr6 (52-189)||(5404815-5404952)
chr6 (52-189)||(28853730-28853867)
chr6 (52-189)||(5924072-5924210)
chr6 (84-189)||(5140691-5140796)
chr6 (21-121)||(31717389-31717489)
chr6 (82-189)||(5409170-5409277)
chr6 (129-189)||(5404601-5404661)
chr6 (30-189)||(33783397-33783557)
chr6 (137-189)||(29819416-29819468)
chr6 (52-157)||(29819631-29819736)
chr6 (137-179)||(31717476-31717518)
[»] chr4 (52 HSPs)
chr4 (17-189)||(989285-989457)
chr4 (17-189)||(13683005-13683177)
chr4 (17-189)||(5720954-5721125)
chr4 (17-189)||(37815342-37815514)
chr4 (17-189)||(22487221-22487393)
chr4 (17-186)||(2184604-2184774)
chr4 (17-189)||(16959974-16960146)
chr4 (17-189)||(17107433-17107605)
chr4 (17-189)||(43749948-43750120)
chr4 (17-189)||(11021674-11021846)
chr4 (17-189)||(9301779-9301950)
chr4 (17-189)||(46081584-46081756)
chr4 (17-189)||(26314685-26314857)
chr4 (17-154)||(17865012-17865149)
chr4 (17-189)||(39385371-39385544)
chr4 (17-189)||(16491648-16491820)
chr4 (17-121)||(46480986-46481090)
chr4 (17-189)||(12792782-12792953)
chr4 (21-189)||(17865190-17865358)
chr4 (17-189)||(4712180-4712351)
chr4 (21-189)||(4712392-4712559)
chr4 (23-189)||(13493100-13493267)
chr4 (17-189)||(32592953-32593121)
chr4 (21-189)||(37815555-37815724)
chr4 (52-189)||(13492885-13493022)
chr4 (54-189)||(26314477-26314611)
chr4 (21-189)||(32592744-32592912)
chr4 (52-167)||(12792595-12792710)
chr4 (21-189)||(17107646-17107813)
chr4 (21-189)||(16959764-16959933)
chr4 (52-189)||(16491892-16492028)
chr4 (21-189)||(22487434-22487600)
chr4 (21-119)||(43750161-43750259)
chr4 (17-118)||(20045874-20045975)
chr4 (21-189)||(11021887-11022055)
chr4 (21-179)||(13683218-13683369)
chr4 (21-189)||(989078-989244)
chr4 (104-189)||(42239370-42239455)
chr4 (52-121)||(2184464-2184532)
chr4 (35-120)||(6100534-6100619)
chr4 (31-119)||(9301641-9301729)
chr4 (129-189)||(17864948-17865008)
chr4 (21-109)||(46481131-46481219)
chr4 (102-189)||(39385183-39385270)
chr4 (52-119)||(5721197-5721265)
chr4 (52-119)||(20046047-20046114)
chr4 (138-189)||(46480947-46480998)
chr4 (129-167)||(46081449-46081487)
chr4 (140-189)||(2184425-2184474)
chr4 (131-176)||(14488126-14488171)
chr4 (131-176)||(31560634-31560679)
chr4 (141-189)||(43750279-43750327)
[»] chr2 (52 HSPs)
chr2 (17-189)||(41594161-41594333)
chr2 (17-189)||(30432805-30432977)
chr2 (17-189)||(3371303-3371475)
chr2 (17-189)||(14379323-14379495)
chr2 (17-189)||(19204593-19204765)
chr2 (17-189)||(38873475-38873645)
chr2 (17-189)||(18369223-18369394)
chr2 (17-189)||(28921195-28921366)
chr2 (20-189)||(7877537-7877707)
chr2 (17-189)||(2395158-2395330)
chr2 (17-189)||(13572473-13572644)
chr2 (17-189)||(29683177-29683347)
chr2 (17-189)||(3948574-3948747)
chr2 (17-189)||(12806549-12806722)
chr2 (17-189)||(33940887-33941058)
chr2 (31-189)||(25318518-25318676)
chr2 (17-189)||(37609166-37609337)
chr2 (17-189)||(6164108-6164280)
chr2 (17-189)||(6880183-6880355)
chr2 (17-189)||(17457928-17458100)
chr2 (17-118)||(4171597-4171698)
chr2 (52-189)||(29683419-29683556)
chr2 (17-189)||(32521475-32521648)
chr2 (21-189)||(18369014-18369182)
chr2 (17-121)||(10748704-10748808)
chr2 (17-109)||(30771149-30771241)
chr2 (21-189)||(4171739-4171907)
chr2 (21-189)||(28921407-28921575)
chr2 (31-189)||(12806773-12806931)
chr2 (21-189)||(2395371-2395539)
chr2 (21-189)||(10748495-10748663)
chr2 (21-189)||(42705166-42705334)
chr2 (31-189)||(14379114-14379272)
chr2 (17-90)||(42705052-42705125)
chr2 (52-189)||(41593952-41594089)
chr2 (21-189)||(3948365-3948533)
chr2 (21-189)||(30432597-30432764)
chr2 (21-189)||(7877324-7877493)
chr2 (52-189)||(33940682-33940819)
chr2 (52-189)||(3371547-3371684)
chr2 (21-121)||(6880042-6880142)
chr2 (53-189)||(19204838-19204975)
chr2 (21-189)||(13572685-13572853)
chr2 (21-189)||(37608958-37609125)
chr2 (21-179)||(17457729-17457887)
chr2 (38-168)||(32521706-32521837)
chr2 (32-119)||(6163969-6164056)
chr2 (137-189)||(6880003-6880055)
chr2 (145-189)||(13278065-13278110)
chr2 (17-74)||(18910050-18910106)
chr2 (78-119)||(26239075-26239116)
chr2 (21-89)||(25318417-25318485)
[»] scaffold0817 (2 HSPs)
scaffold0817 (17-189)||(3984-4156)
scaffold0817 (52-189)||(4227-4364)
[»] scaffold0006 (2 HSPs)
scaffold0006 (17-189)||(212622-212794)
scaffold0006 (21-189)||(212413-212581)
[»] scaffold0167 (1 HSPs)
scaffold0167 (17-189)||(4597-4769)
[»] scaffold0147 (3 HSPs)
scaffold0147 (17-189)||(25124-25296)
scaffold0147 (52-154)||(25356-25458)
scaffold0147 (130-189)||(25459-25518)
[»] scaffold0170 (2 HSPs)
scaffold0170 (17-187)||(8752-8922)
scaffold0170 (52-189)||(8542-8680)
[»] scaffold0103 (2 HSPs)
scaffold0103 (17-189)||(43487-43660)
scaffold0103 (21-189)||(43278-43446)
[»] scaffold0126 (2 HSPs)
scaffold0126 (17-189)||(36204-36375)
scaffold0126 (52-191)||(35993-36132)
[»] scaffold0021 (2 HSPs)
scaffold0021 (20-189)||(118030-118198)
scaffold0021 (52-168)||(118277-118393)
[»] scaffold0137 (3 HSPs)
scaffold0137 (21-189)||(36768-36934)
scaffold0137 (17-94)||(36975-37052)
scaffold0137 (129-189)||(37057-37117)
[»] scaffold0028 (3 HSPs)
scaffold0028 (17-98)||(74007-74088)
scaffold0028 (30-189)||(74137-74295)
scaffold0028 (129-189)||(73934-73994)
[»] scaffold0045 (2 HSPs)
scaffold0045 (129-189)||(43911-43971)
scaffold0045 (133-189)||(43994-44050)
[»] scaffold0062 (1 HSPs)
scaffold0062 (20-69)||(11299-11348)


Alignment Details
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 17 - 446
Target Start/End: Original strand, 32315586 - 32316013
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| | || |||    
T  32315586 atgaatattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtatggccta 32315685  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaaccaaatannnnnnnnatctttgtaaat 216  Q
    |||||       ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||        ||||||||||||    
T  32315686 aaaccaaaaaa-tatttttacagggactaaaaccaaaatatcagatatttgcagggaccatttccatatttaagcagatattttttt-atctttgtaaat 32315783  T
Q  217 gataaatgtcacatatttagtacacacttccgtacaaacttcctttacctttttccaaattagtaaaattcaataatggtggataaagattcttaaacac 316  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32315784 gataaatgtcacatatttagtacacacttccgtacaaactttctttacctttttccaaatgagtaaaattcaataatggtggataaagattcttaaacac 32315883  T
Q  317 atatacaagtttaatagagtaaaattgcatcatgcatgaacattttgcatgtaatcgtacgtgtactagtagttattttcttgtccaatcaaccttctag 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32315884 atatacaagtttaatagagtaaaattgcatcatgcatgaacattttgcatgtaatcgtacgtgtactagtagttattttcttgttcaatcaaccttctag 32315983  T
Q  417 cttgcttcttccagtttctaataacattag 446  Q
    ||||||||||||||||||||||||||||||    
T  32315984 cttgcttcttccagtttctaataacattag 32316013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 26582822 - 26582994
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  26582822 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 26582921  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26582922 aaatcaaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagggaccatttccatatttaa 26582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 14546046 - 14546218
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  14546046 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgcagggacta 14546145  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  14546146 aaactcaaaaaatatttttacagtgactgaaaccaaaatgtcagatatttgcagggaccatttccatatttaa 14546218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 27934624 - 27934452
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  27934624 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgaagggacta 27934525  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  27934524 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 27934452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 52835718 - 52835546
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  52835718 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 52835619  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  52835618 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaa 52835546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 49500016 - 49499844
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  49500016 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggacta 49499917  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||   |||||||||||  |||||||||||||||||||    
T  49499916 aaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcaaggaccatttccatatttaa 49499844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 27285135 - 27284971
Alignment:
Q  25 tatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnn 124  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||       
T  27285135 tatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa 27285036  T
Q  125 nnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
        |||||||| ||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  27285035 aaaatatttttataggaactaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 27284971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33162530 - 33162702
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||| ||||||    
T  33162530 atgaatattatacggaccaatttcaatatgaaatgattttacaaggattaacacaaaatatcaaggaccaaaaccaaatattctatatttgcaaggacta 33162629  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  33162630 aaaccaaaaaaatatttttatagggactaaaactaaaacgtcagatatttacggggaccatttccatatttaa 33162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 46962792 - 46962964
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||    
T  46962792 atgaatattatagggatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattctatatttgcagggatta 46962891  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  46962892 aaaccaaaaaaatatttttatagggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 46962964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 16056521 - 16056350
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  16056521 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 16056422  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  16056421 aaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccaattccatatttaa 16056350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 29838504 - 29838676
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | |||||| ||||||    
T  29838504 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatttttgcaaggacta 29838603  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | ||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  29838604 aaaccaaaaaaatatttttatatggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaa 29838676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 38807711 - 38807539
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  38807711 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattgaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 38807612  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | || |||||||||||| | ||||||||| | |||||||||| |||||||||    
T  38807611 aaaccaaaaaaatatttttataagggctaaaaccaaaacgccagatatttacagggaccattttcatatttaa 38807539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 42093605 - 42093776
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||    
T  42093605 atgaatattattgggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggatta 42093704  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       || ||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  42093705 aaaacaaaaaaata-ttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaa 42093776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 50645645 - 50645473
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |||||| ||||||    
T  50645645 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggacta 50645546  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| ||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  50645545 aaaccaaaaaaatatttttataggaactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaa 50645473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 7029557 - 7029386
Alignment:
Q  18 tgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaa 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||    
T  7029557 tgaatattatagggatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccgaagaccaaaaccaaatattctatatttgcagggactaa 7029458  T
Q  118 aaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||       |||||||| |||||||| ||| |||| | ||||||||||| || |||||||||||||||||    
T  7029457 aaccaaaaaaatatttttatagggactagaacaaaaacgccagatatttgcaggaaccatttccatatttaa 7029386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 49121888 - 49121716
Alignment:
Q  18 tgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaa 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||  ||||||| | |||||||| |||||||    
T  49121888 tgaatattatagggaccaatttcaatatgaaataattttacaatgattaaaacaaaatatcaaggaccaaaactaaatattttatatttgcatggactaa 49121789  T
Q  118 aacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| |||| |||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  49121788 aaccaaaaaaagtatttttataggggctaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 49121716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 21323101 - 21323270
Alignment:
Q  21 atattataggga-ccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||    
T  21323101 atattatagggatccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggattaaaaccaaatattctatatttgcagggactaaaa 21323200  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||        |  |||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  21323201 ccaaaaaaaaaaatttatagggactaaaaccaaaacgctagatatttgcagggaccatttccatatttaa 21323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 55092380 - 55092206
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||    
T  55092380 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcacggacta 55092281  T
Q  117 aa--accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||  |         |||||||| || |||||||||||||| ||||||||||| | |||| ||||| |||||||||    
T  55092280 aaataaaaaaaaaatatttttatagagactaaaaccaaaacgtcagatatttacagggatcattttcatatttaa 55092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 49500088 - 49500225
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||| |||||||||||       |||||||||||||||||||||||    
T  49500088 attttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaaaaatatttttacagggactaaaacca 49500187  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| ||| |||||||| ||||| |||| |||||||||    
T  49500188 aaatatcaaatatttgcagggactattttcatatttaa 49500225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 17110020 - 17109852
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||| ||||||||    
T  17110020 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaac 17109921  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||| ||||||||||||||||||||||||| ||||| |||| |||||||||    
T  17109920 caaaaaaatatttttacaaggattaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 17109852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 32315513 - 32315377
Alignment:
Q  53 ttttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaa 152  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||| |       ||||||||||| ||||||||||||    
T  32315513 ttttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaatcaaaaaaatatttttacagagactaaaaccaa 32315414  T
Q  153 aatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||| ||||| |||| || ||||||    
T  32315413 aatgtcagatatttgcagggactattttcacatttaa 32315377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 46962720 - 46962583
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| |||||||||||| |||||||||||| ||||| || | ||||||||||||||||||||       | |||||||||||||||||||||    
T  46962720 attttacagggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaattttttttacagggactaaaacca 46962621  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| ||||| |||| |||||||||    
T  46962620 aaatatcagatatttgcagggactattttcatatttaa 46962583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 50645686 - 50645854
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||| |||||||| ||||||||||| ||||| || | |||||||||||||||||||    
T  50645686 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaac 50645785  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| |||||||||||| |||||||||||||||| | ||||| |||| |||||||||    
T  50645786 caaaaaaatatttttatagggactaaaactaaaatgtcagatatttacagggactattttcatatttaa 50645854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 29838432 - 29838295
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||| |||||||||        ||||||| |||||||||||||||    
T  29838432 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgcagagactaaaacgaaaaaaatatttttgcagggactaaaacca 29838333  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| ||||| |||| |||||||||    
T  29838332 aaatatcagatatttgcagggactattttcatatttaa 29838295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 55092452 - 55092589
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||| || | ||||||||| ||||||||||       ||||||||||| || ||||||||    
T  55092452 attttacaatgattaaaacaatataccaaggaccaaaatcaaattttttatatttgcagagactaaaaccaaaaaaatatttttacagagaataaaacca 55092551  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||  ||||| |||| |||||||||    
T  55092552 aaatgtcagatatttggagggactattttcatatttaa 55092589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 26582771 - 26582624
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||||| |||| |||||||||| ||||| |||       ||    
T  26582771 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcagg-actaacaccaacaaaata 26582673  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  26582672 tttttacagggactaaaaccaaaatatcagatatttgcggagactattt 26582624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 38807752 - 38807920
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||| ||| || ||||| |||||||  |||||||||| ||||| || | |||||||||||||||||||    
T  38807752 atattacaaggaccaaatccaatatgaatcaatttttcaaagactaaaataaaatacagaggaccaaaaccaaattttttatatttgcagggactaaaac 38807851  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||    
T  38807852 caaacatatatttttacagggactaaaatcaaaatgtcagatatttacagggactatttccatatttaa 38807920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 33162489 - 33162325
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||| ||||| || || ||||||||||||||||||    
T  33162489 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttttaatttgcagggactaaaac 33162390  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       | ||||||||| ||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  33162389 c---aatttttttttacagagactaaaa-taaaatgtcagatatttgcggggactattttcatatttaa 33162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 42093555 - 42093420
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||| ||||| || | ||||||||| ||||||||||       |    
T  42093555 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagagactaaaaccaaaaaaat 42093456  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatt 165  Q
    |||||||||||||||||| |||||||||||||||||    
T  42093455 atttttacagggactaaatccaaaatgtcagatatt 42093420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 14545974 - 14545836
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctt-tatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacc 150  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || || |||||||||||||||||| |       || ||||||| |||||||||||    
T  14545974 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaatcaaaaaaatacttttacatggactaaaacc 14545875  T
Q  151 aaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||  |||| |||| || ||||||    
T  14545874 aaaatgtcagatatttgcaaggactattttcacatttaa 14545836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 27934696 - 27934833
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||| |||||||||||| |||| | | | ||||| |||||||||||| |       ||||||||| |||||||||||||    
T  27934696 attttacaaggactaaaacaaaataacaaggaccaaaaccaaaaaatttatatttacagggactaaaatcaaaaaaatatttttactgggactaaaacca 27934795  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
     |||||||||||||||| ||||| |||| |||||||||    
T  27934796 gaatgtcagatatttgcagggactattttcatatttaa 27934833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 17110061 - 17110149
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatt 105  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||  || | |||||||||| ||||    
T  17110061 atgaatattatagagaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaagattaagaccaaatattctatatt 17110149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 52835759 - 52835927
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa- 119  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||||||||||||     
T  52835759 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatacgaaggaccaaaaccaaattttttatatttgcagggactaaaat 52835858  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |||||||||| ||||||||||||||||| | ||||||||| ||||| |||| |||||||||    
T  52835859 aaaaaaatatatttttaca-ggactaaaaccaaaatgacggatatttgcagggactattttcatatttaa 52835927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 889297 - 889164
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||| | || ||||||||    
T  889297 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttacgggaactaaaac 889198  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    |       |||||||||||||| ||||| |||||    
T  889197 caaaaatatatttttacagggattaaaatcaaaa 889164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 27285183 - 27285282
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   ||||||||| || |||||||||||| ||| |||||||| ||||  || | |||||||||||||||||||    
T  27285183 atattataaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaatatcaatgaccaaaaccaaactttttatatttgcagggactaaaac 27285282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 19590499 - 19590439
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| || |||||||| ||||| ||||||||||||| | |||| |||||||||||||    
T  19590499 tatttttatagcgactaaaatcaaaacgtcagatatttgcagagaccgtttccatatttaa 19590439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 17109797 - 17109748
Alignment:
Q  140 ggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||  |||||||||| ||||| |||| |||||||||    
T  17109797 ggactaaaaccaaaatgctagatatttgcagggactattttcatatttaa 17109748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 26244722 - 26244550
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  26244722 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaactaaataccaaggaccaaaatcaaatattctatatttgcagggacta 26244623  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || ||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26244622 aatccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaa 26244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 20062008 - 20062180
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20062008 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 20062107  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  20062108 aaacccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 20062180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 50096306 - 50096134
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  50096306 atgaatattatagggaccaatttcaatataaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 50096207  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  50096206 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaatttccatatttaa 50096134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 14602183 - 14602011
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  14602183 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 14602084  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| | |||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  14602083 aaactaaaaaaatatttttatatggactaaaaccaaagtgccagatatttgcagggaccatttccatatttaa 14602011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 50624939 - 50624767
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  50624939 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 50624840  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||| | || | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  50624839 aaaccaaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 50624767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 33730 - 33558
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||    
T  33730 atgaatattatagggaccattttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagagacta 33631  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| ||||||||||||||||| ||||||||||||| |||| ||| | |||||||||    
T  33630 aaactagaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggatcatgttcatatttaa 33558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 28031820 - 28031648
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||    
T  28031820 atgaatattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattatatatttgcagggacta 28031721  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       || ||||| | |||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  28031720 aaaccaaaaaaataattttataaggactaaaactaaaacgccagatatttgcagggaccatttccatatttaa 28031648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33619106 - 33619278
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||    
T  33619106 atgaatattatagggaccaatctcaataagaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgtagggacta 33619205  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||||||||||   ||||||||||| ||||||||||||||||||||    
T  33619206 aaaccaaaaaaatatttttataggaactaaaaccaaaacaccagatatttgcagggaccatttccatatttaa 33619278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 18963777 - 18963610
Alignment:
Q  22 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||||    
T  18963777 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaatgaccaaaaccaaatattctatatttgcaaggactaaaacc 18963678  T
Q  122 nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
           |||||||| ||||||||||||||||| | | ||||||||| ||||||||||||| ||||||    
T  18963677 aaaaaaatatttttatagggactaaaaccaaaacgccggatatttgcagggaccatttccacatttaa 18963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 12322265 - 12322093
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| ||||||||    
T  12322265 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaatatacctaggaccaaaaccaaatattctatatttgtagggacta 12322166  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    | |||       |||||||| ||||||||||||||||| ||||||||||| | | |||||||| |||||||||    
T  12322165 ataccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagagaccattttcatatttaa 12322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 43191866 - 43192038
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  43191866 atgaatattatagggaccaatttcaatatgaaatgattttacaaggatcaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaggaacta 43191965  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||| |||||||| ||||||||| |  ||||||| | |||||||||    
T  43191966 aaaccaaaaaaatatttttataggaactaaatccaaaatgccagatatttacatggaccatattcatatttaa 43192038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 47829135 - 47828964
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  47829135 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaagaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 47829036  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| |||||||||| |||||||| |  |||||| | |||| |||||||||||||||    
T  47829035 aaa-caaaaaaatatttttatagggactaaatccaaaatgccgtatatttacagggatcatttccatatttaa 47828964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 37172458 - 37172630
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||    
T  37172458 atgaatattatagggaccaatattaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaaccaaatattctatattcgcagggacta 37172557  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||| | |||||||| |||||||||||    
T  37172558 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttaccgggaccatgtccatatttaa 37172630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10913947 - 10913776
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  10913947 atgaatattatagggaccaatctcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 10913848  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||| |||| ||||| |||||||||||   || ||||||||  |||||||||||||||||||    
T  10913847 aaaccaaaaaaatatctttatagggattaaaaccaaaa-cccaaatatttgcatggaccatttccatatttaa 10913776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 39288364 - 39288527
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  39288364 atgaatattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctttatttgaatggacta 39288463  T
Q  117 aaac-cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    ||||         |||||||| | ||| |||||| |||| ||||||||||||| ||||||||||    
T  39288464 aaacaaaaaaatatatttttataaggattaaaactaaaacgtcagatatttgcagggaccattt 39288527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 42154923 - 42154819
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  42154923 atgaatattatagggaccagtttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 42154824  T
Q  117 aaacc 121  Q
    |||||    
T  42154823 aaacc 42154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 20061967 - 20061799
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  20061967 atattacaaggaccaaatccaatatgaatcaattttacaaggagtaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 20061868  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  20061867 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 20061799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 28031861 - 28032029
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||  || | |||||||||||||||||||    
T  28031861 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaac 28031960  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  28031961 taaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 28032029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 50096347 - 50096515
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||    
T  50096347 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgtagggactaaaac 50096446  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||||  ||||||||||||||||||||||| ||||| |||| || ||||||    
T  50096447 caaaaaattatttttacacggacctaaaccaaaatgtcagatatttgcagggactattttcacatttaa 50096515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 43191815 - 43191657
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||| | || | ||||||||||||||||||||       ||    
T  43191815 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaata 43191716  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||| |||| |||||||||    
T  43191715 tttttacagggactaaaactaaaatatcagatatttgcagggacaattttcatatttaa 43191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 37172417 - 37172249
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||| ||||| ||||| || | |||||| |||||||||||     
T  37172417 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggatcaaaatcaaattttttatatttgaagggactaaaat 37172318  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||| ||||||||||| | ||| |||| |||||||||    
T  37172317 caaaaatatatttttacagggactaaaaccaaaatgacagatatttgcagagactattttcatatttaa 37172249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 50625011 - 50625146
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       | |||||||||||||||||||||    
T  50625011 attttacagggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaatt--tttttttacagggactaaaacca 50625108  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  50625109 aaatgtcagatatttgcagggactattttcatatttaa 50625146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 39027607 - 39027482
Alignment:
Q  64 ttaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagata 163  Q
    |||||||||||||||||||| ||||| ||||| || | ||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||    
T  39027607 ttaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaagcaaaatgtcagata 39027508  T
Q  164 tttgcggggaccatttccatatttaa 189  Q
    ||| ||||||| |||| || ||||||    
T  39027507 tttccggggactattttcacatttaa 39027482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 10913988 - 10914128
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||||| |||||||||   |||||||||||| | ||||||||||||||||||||||| ||||| |  | |||||||||||||||||||    
T  10913988 atattacaaggaccaattccaatatgaatcaattttacaaggactgaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 10914087  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcaga 161  Q
    |       |||||||||| ||||||||||||||||||||||    
T  10914088 caaaaaaatatttttacacggactaaaaccaaaatgtcaga 10914128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 26244763 - 26244931
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| || ||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||     
T  26244763 atattacaaggaccaaatccaatatgaatcaattttacaatgactaaaacaaaataccaaggatcaaaaccaaattttctatatttgcagggactaaaat 26244862  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||| |||||| ||||||||||||||||||||||||| || || |||| || ||||||    
T  26244863 caaaaaaatattttttcagggattaaaaccaaaatgtcagatatttgcaggaactattttcacatttaa 26244931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 42154963 - 42155131
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||| | ||||||| | |||||||||   |||||| ||||| |||||||||||| |||||||||||| ||||| || | ||||||||||||||||||    
T  42154963 aatattacaaggaccaaatccaatatgaatcaattttataaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaa 42155062  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||       ||||||||||||  |||||||||||||||||||||||| | ||||| |||| |||||||||    
T  42155063 cc-aaaaaatatttttacaggatctaaaaccaaaatgtcagatatttacagggactattttcatatttaa 42155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 33802 - 33917
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||| || | ||||| ||| || |||||||       |||||||||||||||||||||||    
T  33802 attttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttacagagaataaaaccaaaaaaatatttttacagggactaaaacca 33901  T
Q  152 aaatgtcagatatttg 167  Q
    ||||||||||||||||    
T  33902 aaatgtcagatatttg 33917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 12322337 - 12322476
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa-ccnnnnnnntatttttacagggactaaaacc 150  Q
    |||||||||||| |||||||||||| |||||||||||| ||||| || || ||||||||||||||||| |        |||||||||||||| |||||||    
T  12322337 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaaatatttttacagggattaaaacc 12322436  T
Q  151 aaaa-tgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| ||||||| |||| |||||||||    
T  12322437 aaaattgtcagatatttacggggactattttcatatttaa 12322476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 47829176 - 47829342
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| |||||||||||| |||||||||||| ||| | || | |||||||||||||||||||    
T  47829176 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttgcagggactaaaac 47829275  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |   ||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  47829276 aaaaacaaaa--attacaggaactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 47829342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 14602223 - 14602390
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||| | || | ||||||||||||||||||    
T  14602223 aatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataacaaggaccaaaaccaatttttttatatttgcagggactaaaa 14602322  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |         |   ||| ||||| ||||||||||||||||||||||||| ||||| |||| |||||||||    
T  14602323 ctaaaaaaaaa--attatagggattaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 14602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 39288313 - 39288153
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaac-aaatattctttatttgcagggactaaaa-ccnnnnnnn 128  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| | |||| || | ||||||||| |||||||| |            
T  39288313 gaccaaatccaatatgaatctattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttatatttgcagtgactaaaatcaaaaaaaa 39288214  T
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||| |||||||| |||||||||| |||||||  ||||| |||| |||||||||    
T  39288213 tatttttacagagactaaaatcaaaatgtcatatatttggagggactattttcatatttaa 39288153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 50617038 - 50616940
Alignment:
Q  91 caaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||| ||||||||||||||||||||       ||| | || | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  50617038 caaatattctatatttgcagggactaaaaccaaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 50616940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 39027606 - 39027727
Alignment:
Q  68 aacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttg 167  Q
    ||||||||||||||||| |||| |||||||||| ||||||||  |||||||| |          ||||| | |||||||||| ||||| ||| |||||||    
T  39027606 aacaaaataccaaggactaaaaccaaatattctatatttgcaaagactaaaatcaaaaaaaatattttataaggactaaaactaaaatatcaaatatttg 39027705  T
Q  168 cggggaccatttccatatttaa 189  Q
    | ||||||||||||||||||||    
T  39027706 cagggaccatttccatatttaa 39027727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 33619065 - 33618976
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcag 110  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||  ||||||||||||||| |||||||| |||||||| | |||||||||    
T  33619065 atattacaaggaccaaatccaatatgaatcaattttacaaagacgaaaacaaaataccaacgaccaaaaccaaatattttatatttgcag 33618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 51999622 - 51999582
Alignment:
Q  43 tatgaaatgattttacaaggattaaaacaaaataccaagga 83  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  51999622 tatgaaatgattttacaaggactaaaacaaaatatcaagga 51999582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 29584566 - 29584494
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||||||| || |||||| |||||||||||  |||||| |||||| ||| |||| | |||||| |||||||    
T  29584566 atgaatattagagagaccaacttcaatatgaatagattttgcaaggactaagacaatacaccaagtaccaaaa 29584494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 42154832 - 42154781
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||| | ||||||||| ||  ||||||||||||||||||    
T  42154832 cagggactaaaaccaaaacg-cagatatttacgaagaccatttccatatttaa 42154781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 52490107 - 52490079
Alignment:
Q  20 aatattatagggaccaatttcaatatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  52490107 aatattatagggaccaatttcaatatgaa 52490079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 8e-65; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 3598584 - 3598414
Alignment:
Q  19 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  3598584 gaatattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 3598485  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||       ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  3598484 accaaaaaaatatttttacagggactaaatccaaaatgtcagatatttgcagggaccattttcatatttaa 3598414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 24491053 - 24491225
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  24491053 atgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggacta 24491152  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  24491153 aaaccaaacaaatatttttacagggactaaaaccaaaatgtcagattattgcagggaccatttccatatttaa 24491225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 10461555 - 10461727
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  10461555 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggacta 10461654  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  10461655 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaa 10461727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18786191 - 18786362
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  18786191 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca-ggacta 18786289  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  18786290 aaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 18786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 43197114 - 43197283
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  43197114 aatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 43197213  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
     |       |||||||| |||||||||||| ||||   ||||||||||| ||||||||||||||||||||    
T  43197214 acaaaaaaatatttttatagggactaaaacaaaaacaccagatatttgcagggaccatttccatatttaa 43197283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 6542469 - 6542640
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  6542469 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggactaaaaccaaatattctatatttgcagggacta 6542568  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       | |||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  6542569 aaa-caaatttttttttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 6542640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 15969603 - 15969431
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  15969603 atgaatattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 15969504  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | || |||||||   |||||||||||||||||||    
T  15969503 aaaccaaaaatatatttttatagggactaaaaccaaaacgccaaatatttgtaaggaccatttccatatttaa 15969431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 4122787 - 4122959
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||    
T  4122787 atgaatattataggggccaatttcaatatgaaatgattttactaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttacagggacta 4122886  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||| || ||| |||||||||||||||    
T  4122887 aaaccaaaaaaatatttttatagggactaaaagcaaaacgccagatatttacgaggaacatttccatatttaa 4122959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 5933335 - 5933507
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  5933335 atgaatattatagggaccgatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 5933434  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||||||| ||| |||||| |||||| |  |||||||| | |||||||||| |||||||||    
T  5933435 aaacaaaaaatatatttttataggaactaaatccaaaacgctagatatttacagggaccattttcatatttaa 5933507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 14868843 - 14868678
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||    
T  14868843 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagtgactaaaa 14868744  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||       | |||||| ||||||||||||||||| | ||||||||||  |||||| |||||||||||||    
T  14868743 cc----aattttttttatagggactaaaaccaaaacgccagatatttggagggaccgtttccatatttaa 14868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 41137314 - 41137142
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||    
T  41137314 atgaatattatagggaccgatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaaggacta 41137215  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| | ||||||||||| | ||||||||||| | || |||||||||||||||    
T  41137214 aaaccaaaaaaatatttttataggtattaaaaccaaaacgccagatatttgcagtgatcatttccatatttaa 41137142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 6497365 - 6497193
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  6497365 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 6497266  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| | ||||||||  ||||| | || |||||| | | ||||||||||||||||||    
T  6497265 aaatcaaaaaaatatttttataaggactaaattcaaaacgccaaatatttacagagaccatttccatatttaa 6497193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 22394334 - 22394506
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  22394334 atgaatattatagggatcaagttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 22394433  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||| |||||| |  |||||||| | ||||| |||| |||||||||    
T  22394434 aaaccaaaaaaatatttttataggaactaaatccaaaacgctagatatttaccgggactattttcatatttaa 22394506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 29991275 - 29991105
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||| ||    
T  29991275 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattttatatttgcagggatta 29991176  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| | ||||||||||  ||| | || |||||||  |||||||||| |||||||||    
T  29991175 aaatcaaaaaaatatttttatatggactaaaac--aaacgccaaatatttggagggaccattttcatatttaa 29991105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 22394293 - 22394125
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| |  ||||||||||| |||||||||||| || ||||||||| ||||| || | |||||||||||||||||||    
T  22394293 atattacaaggaccaaatccaatatgaattacttttacaaggactaaaacaaaatatcagggaccaaaaccaaattttttatatttgcagggactaaaac 22394194  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  22394193 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 22394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 40588861 - 40589031
Alignment:
Q  18 tgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaa 117  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| | ||||||||||||||||    
T  40588861 tgaatattatagagaccaattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatc-aaaccaaatattttatatttgcagggactaa 40588959  T
Q  118 aaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || |       | |||||| ||||| ||||| |||||   ||||||||||| ||||||||||||||||||||    
T  40588960 aaacaaaaaattttttttatagggattaaaagcaaaactccagatatttgcagggaccatttccatatttaa 40589031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 3598658 - 3598795
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| | || ||||||||||||||||||||       |||||||||||||||||||||||    
T  3598658 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 3598757  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||  |||| |||| || ||||||    
T  3598758 aaatgtcagatatttgcaaggactattttcacatttaa 3598795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 6497406 - 6497574
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| | |||||||||||| |||||||||||| |||||| ||||| ||||| || | |||||||||| |||||||     
T  6497406 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggatcaaaaccaaattttttatatttgcaggaactaaaat 6497505  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  6497506 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaa 6497574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 14868887 - 14869054
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||| ||||| || | |||||||||||||||||||    
T  14868887 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttt-tatatttgcagggactaaaac 14868985  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  14868986 caaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 14869054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18786150 - 18785983
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  18786150 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaac 18786051  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| ||||||||||||||||||| || |||||||| || ||||||||| |||||||    
T  18786050 caaaaaaatatttttatagggactaaaaccaaaatgcca-atatttgcaggaaccatttccttatttaa 18785983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 24491003 - 24490845
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||| | || ||||| ||||| |||| ||||||||||||||||||||       |    
T  24491003 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccgatgatcaaaaccaaattttctatatttgcagggactaaaaccaaaaaa-t 24490905  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  24490904 atttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 24490845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 189
Target Start/End: Original strand, 40589481 - 40589634
Alignment:
Q  35 aatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttt 134  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| | |||||||||||||||||| |       | ||||    
T  40589481 aattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatc-aaaccaaatattttatatttgcagggactaaaaacaaatttttttttt 40589579  T
Q  135 tacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || ||||| ||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  40589580 tatagggattaaaagcaaaacgccagatatttgcagggaccatttccatatttaa 40589634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 6542397 - 6542260
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||| || | ||||||||||||||||||||       |||||||||| ||||||||||||    
T  6542397 attttacaaggactaaaataaaataccaaggatcaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacatggactaaaacca 6542298  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| ||||||||||||||| || |||| |||||||||    
T  6542297 aaatatcagatatttgcgggaacaattttcatatttaa 6542260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 7133298 - 7133127
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||  ||| | ||    
T  7133298 atgaatattatagggatcaatttcaatatgaaatgattttacaatgattaaaacaaaatatcaaggatcaaaatcaaatattctatatttataggaatta 7133199  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    | |||       |||||||| || ||||||||| |||||| || |||||| |  ||||||||| |||||||||    
T  7133198 ataccaaaaaaatatttttaaagagactaaaactaaaatgccatatatttac-aggaccattttcatatttaa 7133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 43197039 - 43196902
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||| || |||||||||||  |||| || | ||||||||||||||||||||       |||||||||||||||||||||||    
T  43197039 attttacaaggactaaaacaaaacactaaggaccaaaactaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 43196940  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||   |||| |||| |||||||||    
T  43196939 aaatgtcagatatttgtaaggactattttcatatttaa 43196902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 4122746 - 4122580
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| || ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||     
T  4122746 atattacaaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaat 4122647  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       | |||||||||||||||||| |||||||||| |||||||| ||||| |||| |||||||||    
T  4122646 c--aattttttttttacagggactaaaatcaaaatgtcaaatatttgcagggactattttcatatttaa 4122580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 10461483 - 10461346
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||         ||||||||||  |||||||||||    
T  10461483 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaatatttttacaaagactaaaacca 10461384  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| | ||||||||| ||||| |||| |||||||||    
T  10461383 aaatgacggatatttgcagggactattttcatatttaa 10461346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 25329235 - 25329098
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||| || | |||||| ||||||||||||        |||||||||||| ||||||| ||    
T  25329235 attttacaaggactaaaacataatacgaaggaccaaaatcaaattttttatatttgtagggactaaaacaaaaaatatatttttacaggaactaaaatca 25329136  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||||||||| |||| |||||||||    
T  25329135 aaatatcagatatttgcggggactattttcatatttaa 25329098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 5933294 - 5933126
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||| |||||||| | ||||||||||||||||||     
T  5933294 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaagaccaaaaccaaatattttatatttgcagggactaaaat 5933195  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |   || ||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  5933194 aaaaataaaaaaattgcagggactaaaaccaaaatgtcacatatttgcagggacaattttcatatttaa 5933126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 15969644 - 15969780
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||| ||   |||||||||| | | ||||||||||||||||||||||| ||||| || | ||||||||||||||||||     
T  15969644 atattacaaggaccaaattcaatataaatcaattttacaagaacttaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaat 15969743  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgt 157  Q
    |       |||||||||||||||||||| ||||||||    
T  15969744 caaaaaattatttttacagggactaaaatcaaaatgt 15969780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 7133339 - 7133439
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| ||||||||||||||||||| |||| ||| | |||||||||||||||||||    
T  7133339 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaaaaaaataccaaggaccaaaaccaaaaattttatatttgcagggactaaaac 7133438  T
Q  121 c 121  Q
    |    
T  7133439 c 7133439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 29991325 - 29991414
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||||| |||||||||   |||||||||||| |||||||||||| ||| |||||||| ||||| || | |||||| |||||||||||    
T  29991325 ggaccaattccaatatgaatcaattttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgtagggactaaaa 29991414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 41137386 - 41137428
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  41137386 attttacaaggactaaaacaaaataccaaggactaaaaccaaa 41137428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 16416075 - 16416132
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaa 74  Q
    ||||||||||||  || |||||| ||||||||  ||||||||||||| ||||||||||    
T  16416075 atgaatattatatagatcaatttaaatatgaatagattttacaaggactaaaacaaaa 16416132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 24640660 - 24640688
Alignment:
Q  20 aatattatagggaccaatttcaatatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  24640660 aatattatagggaccaatttcaatatgaa 24640688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13154412 - 13154240
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13154412 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 13154313  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||   ||||||||||| ||||||||||||||||||||    
T  13154312 aaaccaaaaaaatatttttagagggactaaaaccaaaacaccagatatttgcagggaccatttccatatttaa 13154240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 6943830 - 6943658
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  6943830 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 6943731  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  6943730 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccaaatatttgcggggaccatttccatatttaa 6943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 26479504 - 26479673
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  26479504 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagggacta 26479603  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatt 186  Q
    |||||       | |||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  26479604 aaaccaaatttttttttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatt 26479673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 31685843 - 31685672
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  31685843 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 31685744  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatattta 188  Q
    |||||       |||||||| ||||| ||||||||||| |  |||||||||| |||||| ||||||||||||    
T  31685743 aaaccaaaaaaatatttttatagggattaaaaccaaaacgctagatatttgcagggaccttttccatattta 31685672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 220685 - 220514
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  220685 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 220586  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  220585 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 220514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 689840 - 689669
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  689840 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 689741  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  689740 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 689669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 734308 - 734137
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  734308 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 734209  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  734208 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 734137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 858204 - 858033
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  858204 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 858105  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  858104 aaacc-aaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 858033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 9180218 - 9180046
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| |||||||| ||||||    
T  9180218 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaaaaccaaggaccacaaccaaatattctatatttgcatggacta 9180119  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| | ||||| ||||| | ||||||||||| |||||||||| |||||||||    
T  9180118 aaaccaaaaaaatatttttataggaattaaaatcaaaacgccagatatttgcagggaccattttcatatttaa 9180046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18764495 - 18764667
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18764495 atgaattttatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 18764594  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||         |  |||| |||||||| |||||||| | ||||||||||| |||||||||| |||||||||    
T  18764595 aaacaaataaacaaaatttatagggactataaccaaaacgccagatatttgcagggaccattttcatatttaa 18764667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 31186546 - 31186375
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  31186546 atgaatattataaggaccgattttaatatgaaatgattttacaag-attaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggacta 31186448  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  31186447 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 31186375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 31403123 - 31403295
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| ||||||||    
T  31403123 atgaatattatagggaccaatctcaataagaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgaagggacta 31403222  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | | |||||||||||||   ||||||||||| ||||||||||||||||||||    
T  31403223 aaaccaaaaaaatatttttataagaactaaaaccaaaacaccagatatttgcagggaccatttccatatttaa 31403295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 24332435 - 24332262
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  24332435 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacccaaaccaaatattctatatttgcagggacta 24332336  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |||||||| ||||| ||||||||||| |||| |||||| |  ||| ||||| |||||||||    
T  24332335 aaaccaaaaaaaatatttttatagggattaaaaccaaaacgtcatatatttacaaggatcattttcatatttaa 24332262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 6891948 - 6891780
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggact-aaa 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  6891948 aatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6891849  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||        |||||||  || ||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  6891848 acaaaaaaaatattttt--agagactaaaacaaaaacgccagatatttgcagggaccatttccatatttaa 6891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 2835298 - 2835126
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||||||| |||||||| | ||||| ||| |||||    
T  2835298 atgaatattatagggaccaatttcagtacgaaatgattttacaatgattaaaacaaaataccgaggaccaaaaccaaatattttatatttacagagacta 2835199  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||  |||||||||||||  |||||||||||| | ||||||||||||||||||    
T  2835198 aaaccaaaaaaatatttttatagaaactaaaaccaaaacatcagatatttgcagagaccatttccatatttaa 2835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13405621 - 13405449
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||| ||||| ||||| |||    
T  13405621 atgaatattataaggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaacaaaatattctatatttacagggtcta 13405522  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |   ||||||| ||||||  ||||||||||| |||||||||| |||||||||    
T  13405521 aaaccaaacaaatatttttataaaaactaaaatcaaaataccagatatttgcagggaccatttgcatatttaa 13405449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 37586227 - 37586398
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |  ||||| ||  |||||    
T  37586227 atgaatattatatggaccaatttcaatatgaaatgattttaccaggattaaaacaaaataccaaggaccaaaaccaaatatccaatatttaca-agacta 37586325  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |  || ||||||||||| | ||||||||||   |||||||||||||||||||    
T  37586326 aaaccaaaaatatatttttataaagaataaaaccaaaacgccagatatttgtaaggaccatttccatatttaa 37586398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 3272893 - 3272816
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3272893 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 3272816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 3272944 - 3273102
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||| | || | |||||||||||||||||| |       ||    
T  3272944 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaagttttttatatttgcagggactaaaatcaaaaaaata 3273043  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  3273044 tttttatagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 3273102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 6943871 - 6944039
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| |||||| |||| ||||||| ||||| ||   |||||||||||||||||||    
T  6943871 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaataaaatatcaagaaccaaaatcaaatttttcatatttgcagggactaaaac 6943970  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  6943971 caaaaaaatatttttacaggaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 6944039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 13154453 - 13154621
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  |||||||||||||||||||||||| ||| | || | |||||||||||||||||||    
T  13154453 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaac 13154552  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||| ||||| ||||||||||||||||||  ||||| |||| |||||||||    
T  13154553 caaaaaaatatttttacagggattaaaatcaaaatgtcagatatttgtagggactattttcatatttaa 13154621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 9180260 - 9180411
Alignment:
Q  22 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    ||||||| ||||||| | |||| ||||   |||||||||||| |||||||||||| |||||||||||| ||||| || | |||||||| |||||||||||    
T  9180260 tattataaggaccaaatccaatctgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaacc 9180359  T
Q  122 nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcgggga 173  Q
           |||||||||||||| ||||||||||||||||||||||||| ||||    
T  9180360 aaaacaatatttttacagggattaaaaccaaaatgtcagatatttgcaggga 9180411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 13405662 - 13405809
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||| ||||||||||||    
T  13405662 atattacaaggaccaaatccaatatgaatcaattttacaaggaataaaacaaaataccaaggaccaaaaccaaattttttatatttgaagggactaaaac 13405761  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgc 168  Q
    |       |||||||||||||| |||||||||||||||| ||||||||    
T  13405762 caaaaaaatatttttacagggattaaaaccaaaatgtcaaatatttgc 13405809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 2835342 - 2835475
Alignment:
Q  55 ttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    ||||||||| ||||||||||||||||| ||||||| ||| | || | |||||||||||||||||| |       ||||||||||| ||||||||||||||    
T  2835342 ttacaaggactaaaacaaaataccaagaaccaaaaccaattttt-tatatttgcagggactaaaatcaaaaaaatatttttacagcgactaaaaccaaaa 2835440  T
Q  155 tgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||| |||| |||||||||    
T  2835441 tgtcagatatttgcggggactattttcatatttaa 2835475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18764454 - 18764286
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  ||||||||||||||| |||||||| ||||  || | |||||| ||||||| ||||    
T  18764454 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaagaccaaaaccaaagtttttatatttgaagggactcaaac 18764355  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  18764354 caaaaaaatatttttacaaggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 18764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 31403082 - 31402913
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| ||  |||||||| |||||| |||||||| |||||||| | |||||||||||||||||||    
T  31403082 atattacaaggaccaaatccaatatgaatcaattttacaaagacgaaaacaaattaccaacgaccaaaaccaaatattttatatttgcagggactaaaac 31402983  T
Q  121 cnnnnnnn-tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||||| |||||||||||||||| |||||||||||| ||||| |||| |||||||||    
T  31402982 cccaaaaaatatttttacaaggactaaaaccaaaatatcagatatttgcagggactattttcatatttaa 31402913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 24332476 - 24332640
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | || ||||||||||||||||    
T  24332476 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttata-ttgcagggactaaaac 24332574  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |   |||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||    
T  24332575 aaaaaaaaaa---ttacagggactaaaactaaaatgtcagatatttgcagggacaattttcatatttaa 24332640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 55 - 189
Target Start/End: Complemental strand, 26479460 - 26479327
Alignment:
Q  55 ttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    ||||||||| |||||||||||||||| |||||||| ||||  || | ||||||||| ||||||||||       | ||||||||||||||||||||||||    
T  26479460 ttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagtgactaaaaccaatttttt-tttttacagggactaaaaccaaaa 26479362  T
Q  155 tgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| |||||||| ||||| |||| || ||||||    
T  26479361 tgtcaaatatttgcagggactattttcacatttaa 26479327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 27993490 - 27993559
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  27993490 aatattatagggaccaatttcattatgaatggattttacagggactaaaacaaaacaccaaggaccaaaa 27993559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 28050792 - 28050861
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  28050792 aatattatagggaccaatttcattatgaatggattttacagggactaaaacaaaacaccaaggaccaaaa 28050861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 31685916 - 31685985
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| || | ||||||||||||||||||||    
T  31685916 attttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagggactaaaacc 31685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 31186587 - 31186687
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||||||| || |||||||||||||||||||||| ||||| || |  |||| |||||||||||||    
T  31186587 atattataaggaccaaatccaatatgaatcaattttacaaggactacaacaaaataccaaggaccaaaaccaaattttttagatttacagggactaaaac 31186686  T
Q  121 c 121  Q
    |    
T  31186687 c 31186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 31186670 - 31186726
Alignment:
Q  133 tttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  31186670 tttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 31186726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 20112573 - 20112533
Alignment:
Q  32 accaatttcaatatgaaatgattttacaaggattaaaacaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20112573 accaatttcaatatgaaatgattttacaaggattaaaacaa 20112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 3272809 - 3272750
Alignment:
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||| ||||| |||||||||    
T  3272809 atttttatagggactaaaaccaaaacgccagatatttgcagggatcatttacatatttaa 3272750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 37586169 - 37586119
Alignment:
Q  39 tcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    ||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  37586169 tcaatatgaataaattttacaaggactaaaacaaaataccaaggaccaaaa 37586119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 6892070 - 6892107
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatattt 166  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  6892070 tatttttacagggactaaaactaaaatgtcagatattt 6892107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 6892023 - 6892065
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    |||||||||||| |||||||||| |||||||||||||| ||||    
T  6892023 attttacaaggactaaaacaaaacaccaaggaccaaaaccaaa 6892065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 20112483 - 20112427
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| |||||||| |||||||   |||||||| ||||||||||||||||||||    
T  20112483 tatttttacagg-actaaaactaaaatgt---atatttgcagggaccatttccatatttaa 20112427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 167
Target Start/End: Original strand, 31685972 - 31686002
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttg 167  Q
    |||||||||||||||||||||||||||||||    
T  31685972 cagggactaaaaccaaaatgtcagatatttg 31686002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 13426502 - 13426674
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13426502 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 13426601  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||| |||| ||||||||||||| ||||||||| ||||||||||    
T  13426602 aaaccaaaaaaatatttttagagggactaaaactaaaacgtcagatatttgcagggaccattcccatatttaa 13426674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 42517040 - 42516868
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  42517040 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 42516941  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42516940 aaaccaaaaaaatatttttataggaactaaaaccaaaatgccagatatttgcagggaccatttccatatttaa 42516868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 34595529 - 34595701
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  34595529 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaggaccaaaaccaaatattctatatttgcagggacta 34595628  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    || ||       |||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||    
T  34595629 aagccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagggaccattttcatatttaa 34595701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 35026617 - 35026446
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||| ||||||    
T  35026617 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaatgatcaaaaccaaatattctatatttgcatggacta 35026518  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |        ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  35026517 aaa-caaaaaaaaatttttacagggactaaaaccaaaacgtcagatgtttgcagggaccatttccatatttaa 35026446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 44483403 - 44483233
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||| ||    
T  44483403 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggactaaaaccaaatattctatatttgcagggatta 44483304  T
Q  117 aaa-ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatt 186  Q
    ||| |        |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  44483303 aaatcaaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccatttccatatt 44483233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 22364862 - 22365033
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  22364862 atgaatattatagg-accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 22364960  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |  ||||||||||||||||  ||||||||||  | |||||||||||||||||    
T  22364961 aaaccaaaaaaatatttttataaagactaaaaccaaaatgcaagatatttgcaagaaccatttccatatttaa 22365033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 44219504 - 44219676
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||||||    
T  44219504 atgaatactagagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggccaaaaccaaatattctatttttgcagggacta 44219603  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||||||||| |  |||||||||| ||||| ||||||||||||||    
T  44219604 aaaccaaaaaaatatttttatagggaataaaaccaaaacgcaagatatttgcagggactatttccatatttaa 44219676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 19157866 - 19157696
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19157866 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19157767  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |   ||| | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  19157766 aaaccaaaaaaaaa--attataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 19157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 20757265 - 20757095
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20757265 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 20757166  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |   ||| | ||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  20757165 aaaccaaaaaaaaa--attataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaa 20757095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 24566 - 24740
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  24566 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 24665  T
Q  117 aaacc--nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||          |  |||| ||||||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  24666 aaaccaaaaaaaaaaaaatttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccgtatttaa 24740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 40729236 - 40729133
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  40729236 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 40729137  T
Q  117 aaac 120  Q
    ||||    
T  40729136 aaac 40729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 34487315 - 34487143
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||| ||||||||| |||||    
T  34487315 atgaatattatagagaccaatttcaatatgaaatgattttacaacgattaaaacaaaataccaaagacaaaaaccaaatattctatatttgcagagacta 34487216  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | |  |||||||||||| | ||||||||||| || ||||||| |||||||||    
T  34487215 aaaccaaaaaaatatttttataagagctaaaaccaaaacggcagatatttgcaggaaccattttcatatttaa 34487143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 31579641 - 31579745
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||    
T  31579641 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattttatatttgcagggacta 31579740  T
Q  117 aaacc 121  Q
    |||||    
T  31579741 aaacc 31579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 19476567 - 19476394
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||| ||||||| |||||||||| |||||||||||||||    
T  19476567 atgaatattatagggaccaacttcaatatgaaatgattttacaa-gattaaaattaaataccaagaaccaaaaccaaatattctatatttgcagggacta 19476469  T
Q  117 aaac--cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||          |||||||| ||||||||||||||||| | || ||||| || ||||||||||||||||||||    
T  19476468 aaacaaaaaaaaaatatttttatagggactaaaaccaaaacgccaaatattggcagggaccatttccatatttaa 19476394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 42517081 - 42517233
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||||||| |||| ||||| || | |||||||||||||||||||    
T  42517081 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggactaaaatcaaattttttatatttgcagggactaaaac 42517180  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcgggga 173  Q
    |       |||||||||||||||||||||||||||||||||||||||||||||    
T  42517181 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcgggga 42517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 24525 - 24357
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| |||| |||||| | ||| || | |||||||||||||||||||    
T  24525 atattacaaggaccaaatccaatatgaatcaattttacaaggaataaaacaaaatacaaaggtccaaaacccaattttttatatttgcagggactaaaac 24426  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  24425 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgggactattttcatatttaa 24357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 19157938 - 19158075
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||  || | |||||||||||||||||||        |||||||||||||||||||||||    
T  19157938 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 19158037  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  19158038 aaatgtcagatatttgcagggactattttcatatttaa 19158075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 20757337 - 20757474
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||  || | |||||||||||||||||||        |||||||||||||||||||||||    
T  20757337 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 20757436  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  20757437 aaatgtcagatatttgcagggactattttcatatttaa 20757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 44483449 - 44483608
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||| ||||  || | ||||||||||||||||||||       |    
T  44483449 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaat 44483548  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||||| | |||||||||||||| |||| || ||||||    
T  44483549 atttttacagggactaaaaccaaaatgttaaatatttgcggggactattttcacatttaa 44483608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 34595457 - 34595319
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||||||||||| |       |||||||||||||| ||||||||    
T  34595457 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaatatttttacagggattaaaacca 34595358  T
Q  152 aaa-tgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |||||||||||| ||||||| |||| |||||||||    
T  34595357 aaattgtcagatatttacggggactattttcatatttaa 34595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 22954576 - 22954713
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||       |||||||| || || |||||| |    
T  22954576 attttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagagattaaaacta 22954675  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| ||||||||| | || |||||||||| ||||||    
T  22954676 aaatgccagatatttacaggaaccatttccaaatttaa 22954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 40729308 - 40729445
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||| |||||||||||||| | ||| || | ||||||||||||||||||||       |||||||||||||||||||||||    
T  40729308 attttacaaggactaaaacaaaacaccaaggaccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 40729407  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||   ||| |||| |||||||||    
T  40729408 aaatgtcagatatttgcaaagactattttcatatttaa 40729445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 44219463 - 44219295
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| ||||||||||| ||||| || | |||||  |||||||||||     
T  44219463 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttatagggactaaaaa 44219364  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  44219363 caaaaaaatatttttacagtgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 44219295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 19476608 - 19476778
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  19476608 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19476707  T
Q  121 -cnnnnnnntatttttacagggactaaaac-caaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |||||||||||| ||||||||  ||||| ||||||||||||  |||| |||| |||||||||    
T  19476708 aaaaaaaaatatttttacaggaactaaaactaaaaatatcagatatttgcaaggactattttcatatttaa 19476778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 35026658 - 35026825
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||| | || | ||||| ||| |||||||||    
T  35026658 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttacagagactaaaac 35026757  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| | |||||||||||||||||| |||||| | ||||| |||| |||||||||    
T  35026758 caaaaaaatatttttacatgaactaaaaccaaaatgtca-atatttacagggactattttcatatttaa 35026825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 22364822 - 22364658
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||| |||||| |||||||||||| |||||||||||  ||||| || | |||||||||||||||||||    
T  22364822 atattacaaggaccaaatccaatatgaatcaattttgcaaggactaaaacaaaatatcaaggaccaaac-caaattttttatatttgcagggactaaaac 22364724  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||   ||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  22364723 caaaaaaaaatt---acagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 22364658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 829926 - 829994
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||| ||||    
T  829926 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 829994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 1195106 - 1195174
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||| ||||    
T  1195106 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 1195174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 31579600 - 31579500
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  |||||||||||||||||||||||| ||| | || | |||||||||||||||||||    
T  31579600 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaac 31579501  T
Q  121 c 121  Q
    |    
T  31579500 c 31579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 22954509 - 22954410
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| |||||||||||| ||||||||| || ||| | || | |||||||||||||||||||    
T  22954509 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccacaaccaatttttttatatttgcagggactaaaac 22954410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 13426386 - 13426326
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||    
T  13426386 tatttttacaggaactaaaaccaaaatgtcagatatttgcagggactattttgatatttaa 13426326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 34487366 - 34487454
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||| ||||| || | |||||| |||||||||||    
T  34487366 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttggagggactaaaa 34487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 827186 - 827099
Alignment:
Q  103 atttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggacca-tttccatatttaa 189  Q
    |||||||||||||||||||       |||||||| |||||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  827186 atttgcagggactaaaacccaaaaaatatttttagagggactagaatcaaaatgtcagatatttgcaaggaccattttccatatttaa 827099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 829197 - 829110
Alignment:
Q  103 atttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggacca-tttccatatttaa 189  Q
    |||||||||||||||||||       |||||||| |||||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  829197 atttgcagggactaaaacccaaaaaatatttttagagggactagaatcaaaatgtcagatatttgcaaggaccattttccatatttaa 829110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 40729145 - 40729093
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  40729145 cagggactaaaacaaaaacgccagatatttgcagggaccatttccatatttaa 40729093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8926360 - 8926188
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  8926360 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 8926261  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  8926260 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccatttccatatttaa 8926188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 8936617 - 8936445
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  8936617 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 8936518  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  8936517 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccatttccatatttaa 8936445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 19661559 - 19661731
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19661559 atgaatattatagggaccaatttcaacatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19661658  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  19661659 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 19661731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 31717348 - 31717176
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  31717348 atgaatattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 31717249  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  31717248 aaaccaaaaaaatatttttatagggattaaaaccaaaacgtcaaatatttgcagggaccatttccatatttaa 31717176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 3484957 - 3484784
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3484957 atgaatattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 3484858  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        ||||||||||  ||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  3484857 aaaccaaaaaaaatatttttacacagactaaaaccaaaatgttagatatttgcagggatcatttccatatttaa 3484784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 3345229 - 3345401
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||| |||| ||||    
T  3345229 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatgttctatatttacaggaacta 3345328  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  3345329 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 3345401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 30609076 - 30609248
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||    
T  30609076 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcatggacta 30609175  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||   ||||||||||| |||||||||| |||||||||    
T  30609176 aaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcagggaccattttcatatttaa 30609248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 5924000 - 5923822
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  5924000 atgaatattctagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 5923901  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaaccaaa 194  Q
    |||||        |||||||| ||||||||||||||||| |  |||||||||| |||||||||||||||||||| ||||    
T  5923900 aaaccaaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaagcaaa 5923822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 33783609 - 33783780
Alignment:
Q  19 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  33783609 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 33783708  T
Q  119 acc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||        ||||||||  |||||||||||| ||| | ||||||||||| |||| |||||||||||||||    
T  33783709 accaaaaaaaatatttttagggggactaaaaccgaaacgccagatatttgcagggatcatttccatatttaa 33783780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 17238207 - 17238033
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcaggg--ac 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||  ||    
T  17238207 atgaatattattgggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggatac 17238108  T
Q  115 taaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||        | |||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  17238107 taaaaccaaaaaaaaaattttgcagggactaaaaccaaaatatcagatatttgcagggatcatttccatatttaa 17238033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 28853658 - 28853485
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  28853658 atgaatattatatggaccaatttcaatatgaaatgattttagaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 28853559  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |||||||||||||||||||||||||| | || |||||||  | ||||||||||||||||||    
T  28853558 aaaccaaaaaaaatatttttacagggactaaaaccaaaacgccaaatatttgtagtgaccatttccatatttaa 28853485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 29819559 - 29819455
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  29819559 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 29819460  T
Q  117 aaacc 121  Q
    |||||    
T  29819459 aaacc 29819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17238248 - 17238416
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  17238248 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcagggactaaaac 17238347  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  17238348 caaaaaattatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 17238416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 30609035 - 30608867
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  30609035 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 30608936  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||||||||||||| ||||| ||| |||||||| ||||| |||| |||||||||    
T  30608935 caaaaaaatatttttacagggactaaaactaaaatatcaaatatttgcagggactattttcatatttaa 30608867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 19661518 - 19661351
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   ||||||||| || ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  19661518 atattacaaggaccaaattcaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 19661419  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||  ||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  19661418 c-aaaaaatatttttacagaaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 19661351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 16525366 - 16525197
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| |||||||| | |||||||||||||||    
T  16525366 atgagtattatagagatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagataaaaaccaaatattttatatttgcagggacta 16525267  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |   ||| ||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||||    
T  16525266 aaaccaaaaaaaaa---ttatagggattaaaagcaaaacgtcagatatttgcagggactatttccatatttaa 16525197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 16525407 - 16525575
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||| ||||||||||| ||||| || | ||||| |||||||||||||    
T  16525407 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaatacgaaggaccaaaaccaaattttttatatttacagggactaaaac 16525506  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||| |||||||| |||||||||||||||||||||| ||| |||| |||||||||    
T  16525507 aaaaaaaatatttttacaaggactaaatccaaaatgtcagatatttgcggagacgattttcatatttaa 16525575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 26272194 - 26272362
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||| |||||||||||||||| ||||| || | |||||||||| ||||||||    
T  26272194 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatataccaaggaccaaaatcaaattttttatatttgcaggaactaaaac 26272293  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| ||||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  26272294 caaaaatatatttttatagggactaaaaccaaaatgtcagatatttacagggactattttcatatttaa 26272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 8926401 - 8926571
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaata--ccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||  | ||||||||||| ||||| || | |||||||||||||||||    
T  8926401 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaa 8926500  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||       |||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  8926501 accaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccgggactattttcatatttaa 8926571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 8936658 - 8936828
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaata--ccaaggaccaaaaacaaatattctttatttgcagggactaaa 118  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||  | ||||||||||| ||||| || | |||||||||||||||||    
T  8936658 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaa 8936757  T
Q  119 accnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||       |||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||||    
T  8936758 accaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttaccgggactattttcatatttaa 8936828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 5404743 - 5404666
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5404743 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 5404666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 3345189 - 3345021
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||| | ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  3345189 atattacaaggaccaaatccaatatgaatcaattttacaagaagtaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 3345090  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||| |||||||||||||||| |||||||| ||| ||||| |||| |||||||||    
T  3345089 gaaaaaaatatttttacaaggactaaaaccaaaatatcagatatctgcagggactattttcatatttaa 3345021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 9571627 - 9571778
Alignment:
Q  38 ttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttac 137  Q
    |||||||||||   |||||||||||| ||||||||||||| ||||| ||||| ||||| ||   ||||||||||||||||||||       |||||||||    
T  9571627 ttcaatatgaatcaattttacaaggactaaaacaaaatacgaaggatcaaaatcaaatttttcatatttgcagggactaaaaccaaaaaaatatttttac 9571726  T
Q  138 agggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| ||||||||||||||||||  |||| |||| |||||||||    
T  9571727 agggactaaaactaaaatgtcagatatttgcaaggactattttcatatttaa 9571778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 3485019 - 3485156
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||||| || | |||||||||||||||||| |       ||||||| |||||||||||||||    
T  3485019 attttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttgcagggactaaaacca 3485118  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| |||||||| ||||| |||| || ||||||    
T  3485119 aaatgtcacatatttgcagggactattttcacatttaa 3485156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 5404815 - 5404952
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||| || |||||||| ||||| || | |||||||||||||||||| |       |||||||| || |||||||||||    
T  5404815 attttacaaggactaaaacaaaatactaatgaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaacca 5404914  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  5404915 aaatgtcagatatttgcagggactattttcatatttaa 5404952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 28853730 - 28853867
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||| |||||||||||| ||||| || | |||||||||| |||||||||       |||||||| ||||||||||||||    
T  28853730 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaaccaaaaaaatatttttatagggactaaaacca 28853829  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||  ||||| |||| ||| |||||    
T  28853830 aaatgtcagatatttgtagggactattttcatgtttaa 28853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 5924072 - 5924210
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnn-tatttttacagggactaaaacc 150  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| || | |||||| ||||||||||||         |||||||||||| |||||||||    
T  5924072 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaacataaaaaaatatttttacaggaactaaaacc 5924171  T
Q  151 aaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||| ||||| |||| |||||||||    
T  5924172 aaaatgtcagatatttgcagggactattttcatatttaa 5924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 5140796 - 5140691
Alignment:
Q  84 ccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccat 183  Q
    |||||| |||||||| | |||||||||||||||||| |       |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  5140796 ccaaaaccaaatattatatatttgcagggactaaaatcaaaaaaatatttttgtagggactaaaaccaaaatgtcagatatttgcagggaccatttccat 5140697  T
Q  184 atttaa 189  Q
    ||||||    
T  5140696 atttaa 5140691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 31717389 - 31717489
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| |  | |||||||||||||||||||    
T  31717389 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 31717488  T
Q  121 c 121  Q
    |    
T  31717489 c 31717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 5409170 - 5409277
Alignment:
Q  82 gaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttcc 181  Q
    |||||||| ||||| || | |||||||||||||||||| |       |||||||| || |||||||||||||||||||||||||||| ||||| |||| |    
T  5409170 gaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaaccaaaatgtcagatatttgcagggactattttc 5409269  T
Q  182 atatttaa 189  Q
    ||||||||    
T  5409270 atatttaa 5409277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 5404661 - 5404601
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  5404661 tatttttatagggactaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 5404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 33783557 - 33783397
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac-cnnnnnnn 128  Q
    ||||||| |||||||||||   ||||||||||||  ||||||||||| |||| ||||||| ||||| || | |||||||| ||||||||||             
T  33783557 ggaccaaattcaatatgaatcaattttacaaggacaaaaacaaaatatcaagaaccaaaaccaaattttttatatttgcaaggactaaaactaaaaaaaa 33783458  T
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||| | | |||||||||| |||||||||||| ||||| || | |||||||||    
T  33783457 tatttttacaggaattgaaaccaaaatatcagatatttgcagggactatcttcatatttaa 33783397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 29819468 - 29819416
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  29819468 cagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 29819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 29819631 - 29819736
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||||| || | |||||||  ||||||||| |       | ||||||| | |||||||||||    
T  29819631 attttacaaggactaaaacaaaataccaatgaccaaaaccaaattttttatatttgcttggactaaaatcaaaaaaatgtttttaccgagactaaaacca 29819730  T
Q  152 aaatgt 157  Q
    ||||||    
T  29819731 aaatgt 29819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 31717476 - 31717518
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||    
T  31717476 cagggactaaaaccaaaatttcagatatttgcagggactattt 31717518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 989285 - 989457
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||||||    
T  989285 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatattctatatctgcagggacta 989384  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  989385 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccatttccatatttaa 989457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13683177 - 13683005
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||||||    
T  13683177 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttacagggacta 13683078  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  13683077 aaaccaaaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagggatcatttccatatttaa 13683005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 5721125 - 5720954
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  5721125 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 5721026  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  5721025 aaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 5720954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 37815514 - 37815342
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  37815514 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 37815415  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  37815414 aaaccaaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaa 37815342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 22487393 - 22487221
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  22487393 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 22487294  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| | |||||||||||||||   ||||||||||||||||||||||||||||||||    
T  22487293 aaaacaaaaaaatatttttataaggactaaaaccaaaacaccagatatttgcggggaccatttccatatttaa 22487221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 2184604 - 2184774
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  2184604 atgaatattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 2184703  T
Q  117 aaaccnnnnnnntatttttacagg-gactaaaaccaaaatgtcagatatttgcggggaccatttccatatt 186  Q
    |||||       |||||||| |||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  2184704 aaaccaaaaaaatatttttataggacactaaaaccaaaacgtcagatatttgcagggaccatttccatatt 2184774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 16959974 - 16960146
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |||||| ||||||    
T  16959974 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggacta 16960073  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  16960074 aaaccaaaaaaatatttttatagggactaaaaccaaaatgcaagatatttgcagggaccatttccatatttaa 16960146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 17107605 - 17107433
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  17107605 atgaatattatagggaccaatttcaatatgaaatgattgtacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 17107506  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||| |||||||||||||| |||| | || |||||| | ||||||||||||||||||||    
T  17107505 aaaccaaaaaaatattttaacagggactaaaactaaaacgccaaatattttcagggaccatttccatatttaa 17107433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 43750120 - 43749948
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||    
T  43750120 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 43750021  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| ||||||| |||||   ||||||||||| ||||||||||||||||||||    
T  43750020 aaaccaaaaaaatatttttataggaactaaaatcaaaacaccagatatttgcagggaccatttccatatttaa 43749948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 11021846 - 11021674
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |    
T  11021846 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagggacca 11021747  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| ||||||||||||||||| | ||||||||||  |||||||||| |||||||||    
T  11021746 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgtagggaccattttcatatttaa 11021674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 9301779 - 9301950
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  9301779 atgaatattatacggaccaatatcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcatggacta 9301878  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| || |||||||| ||||| | |||||||||||  |||||||||||||||||||    
T  9301879 aaaccaaaaaaatatttttatagagactaaaatcaaaacgccagatatttgc-tggaccatttccatatttaa 9301950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 46081584 - 46081756
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||  ||||    
T  46081584 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagaaacta 46081683  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||        |||| | | | ||| ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  46081684 aaacaaaaaatatattctcataaggattaaaaccaaaacgtcagatatttgcgggaaccattttcatatttaa 46081756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 26314685 - 26314857
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||    
T  26314685 atgaatattatatggaccaatttcaatatgaaatgattttacgtggattaaaacaaaataccaaggatctaaaccaaatattctatatttgcagggacta 26314784  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||||||||| | |||||||||||  ||| |||||||||||||||    
T  26314785 aaaccaaaaaaatatttttatagggattaaaaccaaaacgccagatatttgccaggaacatttccatatttaa 26314857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 17865149 - 17865012
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  17865149 atgaatattatagggaccattttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggacta 17865050  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaa 154  Q
    |||||       |||||||| | |||||||||||||||    
T  17865049 aaaccaaaaaaatatttttatatggactaaaaccaaaa 17865012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 39385371 - 39385544
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||| | |||||||||||||||    
T  39385371 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaagacaaaaaccaaatattttatatttgcagggacta 39385470  T
Q  117 aaac-cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||         |||||||| ||||| ||||| ||||| ||||||||||||  ||||||||||||||||||||    
T  39385471 aaacaaaataatatatttttatagggattaaaagcaaaacgtcagatatttgtagggaccatttccatatttaa 39385544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 16491820 - 16491648
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| ||    
T  16491820 atgaatatcatagggaccaatttcaatatgaaatgattttataaggattaaaataaaataccaaggaccaaaaccaaatattctatatttgcagggatta 16491721  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||| |||||||  |||||| ||||||||| |  ||||||||| |||||||||    
T  16491720 aaaccaaaaaaatatttttataggaactaaaattaaaatgccagatatttacaaggaccattttcatatttaa 16491648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 46481090 - 46480986
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  46481090 atgaatattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggacta 46480991  T
Q  117 aaacc 121  Q
    |||||    
T  46480990 aaacc 46480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 12792782 - 12792953
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  12792782 atgaatattatagtgaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 12792881  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||          |   ||| |||||||||||||||||||  ||||||||||  |||||||||||||||||||    
T  12792882 aaataaaaaataaaaaattatagggactaaaaccaaaatgctagatatttgc-aggaccatttccatatttaa 12792953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17865190 - 17865358
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||| |||||||| ||||| || | |||||||||||||||||||    
T  17865190 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaac 17865289  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  17865290 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 17865358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 4712351 - 4712180
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  4712351 atgaatattatagggaccaatttcaatatgaaatgattttataaggatt-aaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 4712253  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    | |||        |   ||| ||| ||||||||||||| | || |||||||| |||||||||| |||||||||    
T  4712252 ataccaaaaaaaaaaaattataggaactaaaaccaaaacgccaaatatttgcagggaccattttcatatttaa 4712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 4712392 - 4712559
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  4712392 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 4712491  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  4712492 c-aaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 4712559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 13493100 - 13493267
Alignment:
Q  23 attatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc- 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||     
T  13493100 attatagggaccaatttcaatatgaaatggttttacaaggattaaaacaaaataccatggatcaaaaccaaatattctatatttgcagggactaaaacca 13493199  T
Q  122 --nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
             |||||||| |  |||||||||||||| |  | |||||||| ||||||||||||||||||||    
T  13493200 attttattttatttttata--gactaaaaccaaaacgctaaatatttgcagggaccatttccatatttaa 13493267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 32592953 - 32593121
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||   ||||||||  ||||||||| |||||||||||||||    
T  32592953 atgaatattatatgaaccaatatcaatatgaaatgattttataaggattaaaacaaaatacc---gaccaaaactaaatattctatatttgcagggacta 32593049  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       || ||||| | ||| |||||||||||||| |||||||||| || |||||||||||||||||    
T  32593050 aaaccaaaaaatta-ttttataaggattaaaaccaaaatgtaagatatttgctggaaccatttccatatttaa 32593121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 37815555 - 37815724
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| ||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  37815555 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 37815654  T
Q  121 c-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  37815655 caaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgctgggacaattttcatatttaa 37815724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 13493022 - 13492885
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||| | || ||||||||||||||||||||||       |||||||| ||||||||||||||    
T  13493022 attttacaaggaataaaacaaaataccaaagaccaaaaccaatttttttttatttgcagggactaaaaccaaaaaaatatttttagagggactaaaacca 13492923  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| ||||||||||||| ||||| |||| |||||||||    
T  13492922 aaaagtcagatatttgcagggactattttcatatttaa 13492885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 26314611 - 26314477
Alignment:
Q  54 tttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaa 153  Q
    |||||||||| ||||||||||||||||||||||||||||| | || | ||||||||||||||||||||       || ||||||||||||||||||||||    
T  26314611 tttacaaggactaaaacaaaataccaaggaccaaaaacaattttt-tatatttgcagggactaaaaccaaaaaaatagttttacagggactaaaaccaaa 26314513  T
Q  154 atgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||| ||||| |||| || ||||||    
T  26314512 atgtcagatatttgcagggactattttcacatttaa 26314477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 32592912 - 32592744
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||||  || | |||||||||||||||||||    
T  32592912 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaac 32592813  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| |||||||||||||||||||| |||||||| ||||| |||| || ||||||    
T  32592812 caaaaaaatatttttacaaggactaaaaccaaaatgtcaaatatttgcagggactattttcacatttaa 32592744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 12792710 - 12792595
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| || | |||||||||||||||||| |       |||||||||||||||||||||||    
T  12792710 attttacaaggattaaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggactaaaatcaaaaaaatatttttacagggactaaaacca 12792611  T
Q  152 aaatgtcagatatttg 167  Q
    ||||| ||||||||||    
T  12792610 aaatgacagatatttg 12792595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17107646 - 17107813
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||| |||||||| ||||||||||||||||||||||||| ||| | || | ||||||||||||||||||     
T  17107646 atattacaaggaccaaatccaatatgaatcaattctacaaggactaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaat 17107745  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||  |||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  17107746 caaaaaaatatttttaca-tgactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 17107813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 16959933 - 16959764
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||| |||||||| ||||||||||| ||||| || | |||||||| ||||||||||    
T  16959933 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcatggactaaaac 16959834  T
Q  121 cnnnnnnn-tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||| |||||||||||| |||||||||||||||||| ||||| |||| |||||||||    
T  16959833 caaaaaaaatatttttatagggactaaaactaaaatgtcagatatttgcagggactattttcatatttaa 16959764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 16491892 - 16492028
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||| | || | |||||||| || |||||||        |||||||||||||| ||||||||    
T  16491892 attttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcaagg-ctaaaactaaaaaaatatttttacagggattaaaacca 16491990  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| | ||| |||| |||||||||    
T  16491991 aaatgtcagatatttgcagtgactattttcatatttaa 16492028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 22487434 - 22487600
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| ||   |||||||| ||||||||||    
T  22487434 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttcatatttgcaaggactaaaac 22487533  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |   |||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  22487534 caaaaaaaaa--attacagggactaaaaccaaaatgtcaaatatttgcagggactattttcatatttaa 22487600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 43750161 - 43750259
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||| | ||||||| | ||||||||||  |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||    
T  43750161 atattacaaggaccaaatccaatatgaaacaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 43750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 20045975 - 20045874
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| | |||||||||||||||||| |||||| || ||||||||||||| ||||| ||||||||  ||||||| | |||||||||| ||||    
T  20045975 atgaatattatagaggccaatttcaatatgaaataattttataaagattaaaacaaaacaccaaagaccaaaactaaatattatatatttgcaggaacta 20045876  T
Q  117 aa 118  Q
    ||    
T  20045875 aa 20045874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 11021887 - 11022055
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||| || |||||||||||||| |||||||||| ||||| || | |||||| | ||||||||||    
T  11021887 atattacaaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaataccgaggaccaaaatcaaattttttatatttgtaaggactaaaac 11021986  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||| ||| |||||| ||||| |||||||| | | |||||||||| |||||||||    
T  11021987 caaaaaaatatttttacatggattaaaacgaaaatatcagatatgtacagggaccattttcatatttaa 11022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 13683218 - 13683369
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||        ||||||||    
T  13683218 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatat-------aactaaaac 13683310  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
    |       |||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  13683311 caaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagggactattt 13683369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 989244 - 989078
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| |||||||||||   |||||||||||| | ||||||||||| ||||| ||||| ||| | || | ||||| |||| ||||||||    
T  989244 atattacaaggaccaaattcaatatgaatcaattttacaaggactgaaacaaaatac-aaggatcaaaaccaatttttttatatttacagg-actaaaac 989147  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatattt-gcggggaccatttccatatttaa 189  Q
    |       |||||||||||| ||||||||||||||||||||||||| || ||||| |||| |||||||||    
T  989146 caaaaaaatatttttacagg-actaaaaccaaaatgtcagatatttggcagggactattttcatatttaa 989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 42239370 - 42239455
Alignment:
Q  104 tttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||       ||||||||||| ||||||||| |||||||||||||||||| ||||| |||| |||||||||    
T  42239370 tttgcagggactaaaaccaaaaaaatatttttacagagactaaaactaaaatgtcagatatttgcagggactattttcatatttaa 42239455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 2184532 - 2184464
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaacc 121  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| ||   |||||||| |||||||||||    
T  2184532 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttaatatttgca-ggactaaaacc 2184464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 6100534 - 6100619
Alignment:
Q  35 aatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    ||||| ||||||||  ||||||| || || |||||||||||||||||||||||||  |||| |||| ||||||||  |||||||||    
T  6100534 aatttaaatatgaatagattttataaagactaaaacaaaataccaaggaccaaaatgaaattttctatatttgcaaagactaaaac 6100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 9301729 - 9301641
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||| | ||||||||| | |||||||||||| |||||||||||  |||||||||||| ||||| || | | |||| |||||||||||    
T  9301729 gaccaaatccaatatgaattaattttacaaggactaaaacaaaatttcaaggaccaaaaccaaattttttatgtttgaagggactaaaa 9301641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 17865008 - 17864948
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| | ||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  17865008 tatttttatatggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 17864948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 46481131 - 46481219
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgca 109  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||||||||| || ||||| || | ||||||||    
T  46481131 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccataaccaaattttttatatttgca 46481219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 39385270 - 39385183
Alignment:
Q  102 tatttgcagggactaaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||       ||||||||||| || |||| ||||||||||| |||||||  ||||| |||| |||||||||    
T  39385270 tatttgcagggactaaaaccaaaaaaatatttttacagagattaaatccaaaatgtcatatatttggagggacgattttcatatttaa 39385183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 5721197 - 5721265
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaa-caaatattctttatttgcagggactaaaa 119  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||| || | |||||||  |||||||||    
T  5721197 attttacaaggactaaaacaaaataccaatgaccaaaaaccaaattttttatatttgcttggactaaaa 5721265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 20046047 - 20046114
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||| | |||||||||||| |||||||||||| ||||| || | ||||  ||||||||||||    
T  20046047 attttacaagaactaaaacaaaatagcaaggaccaaaaccaaattttttatattgacagggactaaaa 20046114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 46480998 - 46480947
Alignment:
Q  138 agggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| | |||||||||||  ||||||||| |||||||||    
T  46480998 agggactaaaaccaaaacgccagatatttgcaaggaccattttcatatttaa 46480947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 46081487 - 46081449
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttg 167  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  46081487 tatttttatagggactaaaacaaaaatgtcagatatttg 46081449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 2184474 - 2184425
Alignment:
Q  140 ggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||||| | | | |||| |||||||||    
T  2184474 ggactaaaaccaaaatgtcagatatttgcagaggctattttcatatttaa 2184425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 14488126 - 14488171
Alignment:
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggacca 176  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||    
T  14488126 tttttacagggactaaaaccaaaatgagacatatttgcagggacca 14488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 31560634 - 31560679
Alignment:
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggacca 176  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||    
T  31560634 tttttacagggactaaaaccaaaatgagacatatttgcagggacca 31560679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 43750279 - 43750327
Alignment:
Q  141 gactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||| | ||||||||| ||||| |||| |||||||||    
T  43750279 gactaaaaccaaaatgacggatatttgcagggactattttcatatttaa 43750327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 41594161 - 41594333
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| | |||||||||||||||    
T  41594161 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattttatatttgcagggacta 41594260  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41594261 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaa 41594333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 30432805 - 30432977
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||| |||||||||||||||    
T  30432805 atgaatattataagcaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaaagaccaaaaccaaaaattctatatttgcagggacta 30432904  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30432905 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgggaccatttccatatttaa 30432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 3371475 - 3371303
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||    
T  3371475 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaggaacta 3371376  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||||||||||||||||||||| | ||||||||| |  |||||||||||||||||||    
T  3371375 aaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttacctggaccatttccatatttaa 3371303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 14379323 - 14379495
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | |||||| ||||||    
T  14379323 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacaaaaaccaaatattctatttttgcaaggacta 14379422  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  14379423 aaaccaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaa 14379495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 19204765 - 19204593
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19204765 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19204666  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | ||||||||| ||||| |  | |||||||| ||||||||||||||||||||    
T  19204665 aaaccaaaaaaatatttttataaggactaaaatcaaaacgctaaatatttgcagggaccatttccatatttaa 19204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 38873645 - 38873475
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  38873645 atgaatattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggacta 38873546  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       | |||||| ||||||||||||||||| || |||||||||  ||||||||||||||||||||    
T  38873545 aaacc--aaatttttttttatagggactaaaaccaaaacgttagatatttggagggaccatttccatatttaa 38873475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18369223 - 18369394
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  18369223 atgaatattatagggaccaatctcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 18369322  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| || | |||||||||||||||    
T  18369323 aaacc-aaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaggtatcatttccatatttaa 18369394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 28921366 - 28921195
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  28921366 atgaatattataaagaccagtttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 28921267  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||| |||||||  |||||||||||| ||||||||||||||| ||||    
T  28921266 aaacc-aaaaaatatttttatagggactaataccaaaacatcagatatttgcagggaccatttccatagttaa 28921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 7877537 - 7877707
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  7877537 aatattatagggttcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 7877636  T
Q  120 cc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||        |||||||| |||||||| |||||||| | ||||||||||| |||||||||| |||||||||    
T  7877637 ccaaaaaaaatatttttatagggactagaaccaaaacgccagatatttgcagggaccattttcatatttaa 7877707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 2395330 - 2395158
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||| |||||||||||||||    
T  2395330 atgaatattatagagatcaatttcaatatgaaatgattttacaaggactaaaataaaataccaaggactaaaaccaaatattctatatttgcagggacta 2395231  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||| ||||| | ||||||||||| | ||||||||||||||||||    
T  2395230 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagtgaccatttccatatttaa 2395158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13572644 - 13572473
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  13572644 atgaatattataagaaccaatttcaacatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaacattctatatttgcagggacta 13572545  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       |||||||| |||||||||||| |||| | ||||||||||| ||||||||||||||||||||    
T  13572544 aaa-caaaaaaatatttttatagggactaaaactaaaacgccagatatttgcagggaccatttccatatttaa 13572473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 29683347 - 29683177
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||||||||| |||    
T  29683347 atgaatattataggg-ccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggcc-aaaccaaatattctatatttgcaggggcta 29683250  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| |||||||||| |||||||||    
T  29683249 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattttcatatttaa 29683177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 3948574 - 3948747
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||||    
T  3948574 atgaatattataatgaccaatttcaatatgaaatgattttacaaggattaaaacaaaatataaaggaccaaaaccaaatattctatatttgcagggacta 3948673  T
Q  117 aaaccnnnnnnntattttta-cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       ||||||||  |||||||||||| |||| |||||||||||  | |||||||||||||||||||    
T  3948674 aaaccaaaaaaatatttttattagggactaaaactaaaacgtcagatatttatgaggaccatttccatatttaa 3948747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 12806722 - 12806549
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  12806722 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 12806623  T
Q  117 aaac-cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||         |||||||| |||||||||| |||||| | || |||||| |  |||||||||||||||||||    
T  12806622 aaacaaaaaaatatatttttatagggactaaatccaaaacgccaaatatttacaaggaccatttccatatttaa 12806549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 33940887 - 33941058
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||    
T  33940887 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 33940986  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||| |||||| ||||||||| | | | ||||| ||||||||||||    
T  33940987 aaaccaaaaaaatatttttaaagggactaaagccaaaacgtcagatatatccagagacca-ttccatatttaa 33941058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 25318518 - 25318676
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| || |||||||| |       ||    
T  25318518 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgtagagactaaaatcaaaaaaata 25318617  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||| ||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  25318618 tttttagagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 25318676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 37609166 - 37609337
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaa-caaaataccaaggaccaaaaacaaatattctttatttgcagggact 115  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||||| |||||||||| ||||||||||||||    
T  37609166 atgaatattatagg-accaatttcaatatgaaat-attttacaaggattaaaaactaaaaaccaaggaccaaaaccaaatattctatatttgcagggact 37609263  T
Q  116 aaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||       |||||||| ||||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  37609264 aaaaccaaaaaaatatttttagagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaa 37609337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 6164108 - 6164280
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||    
T  6164108 atgaatattataaggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgctgggacta 6164207  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||| ||||| ||||| | |||||||| || ||| |||| |||||||||||    
T  6164208 aaaccaaaaaaatatttttatagggattaaaatcaaaacgccagatattagcaggggccatatccatatttaa 6164280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 6880183 - 6880355
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  6880183 atgaatattatggggaccaatttcaatacgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 6880282  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| | |||||||| |||||| | |||||||||   ||||| ||||||||||||||    
T  6880283 aaaccaaaaaaatatttttataaggactaaatccaaaacgccagatatttatagggactatttccatatttaa 6880355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 17457928 - 17458100
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||| || ||    
T  17457928 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattttatatttgcagagatta 17458027  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||| ||||    |||||||||| || ||||||| |||||||||    
T  17458028 aaaccaaaaaaatatttttatagggactaaaacgaaaacactagatatttgcaggaaccattttcatatttaa 17458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 4171698 - 4171597
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||    
T  4171698 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatgttctatatttgcagggacta 4171599  T
Q  117 aa 118  Q
    ||    
T  4171598 aa 4171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 29683419 - 29683556
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       |||||||||||||||||||| ||    
T  29683419 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaatca 29683518  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  29683519 aaatgtcagatatttgcagggactatttccatatttaa 29683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 32521648 - 32521475
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| | ||||| || ||||||    
T  32521648 atgaatattataaggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaagaccaaaaccaaatattttatatttacaaggacta 32521549  T
Q  117 aaacc-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |||||||| | ||||||||||||||| |||| |||||| | || |||||||||||||||||    
T  32521548 aaaccaaaaaaaatatttttagaaggactaaaaccaaaacgtcatatatttaccggaaccatttccatatttaa 32521475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18369182 - 18369014
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||| ||||| || | |||||||||||||||||||    
T  18369182 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaac 18369083  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  18369082 ccaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 18369014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 10748704 - 10748808
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| | |||||||    
T  10748704 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttactgggacta 10748803  T
Q  117 aaacc 121  Q
    |||||    
T  10748804 aaacc 10748808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 30771241 - 30771149
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||    
T  30771241 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgca 30771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 4171739 - 4171907
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| || | ||||||| |||||||||||    
T  4171739 atattacaaggaccaaatccaatatgaattaattttacaaggattaaaacaaattaccaaggaccaaaaccaaattttttatatttgctgggactaaaac 4171838  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||| | |||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  4171839 caaaaaaatatttttaccgagactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 4171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 28921407 - 28921575
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||||||||| ||||| || | |||||||||||||||||||    
T  28921407 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaac 28921506  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||| |||||||||||||||| |||||||| ||||| |||| |||||||||    
T  28921507 caaaaaaatatttttacagggattaaaaccaaaatgtcatatatttgcagggactattttcatatttaa 28921575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 12806773 - 12806931
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||||       ||    
T  12806773 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaata 12806872  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||| |||| |||||||||    
T  12806873 tttttacggggactaaaaccaaaatgttagatatttgcagggacaattttcatatttaa 12806931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 2395371 - 2395539
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| | |||||||||| |||||||||||| ||||| || | |||||||||||| ||||||    
T  2395371 atattacaaggaccaaatccaatatgaatcaattttacaaggacttaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggattaaaac 2395470  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  2395471 aaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 2395539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 10748663 - 10748495
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||| ||||||||||||||| ||||| || | |||||||||||| ||||||    
T  10748663 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaagtaccaaggaccaaaaccaaattttttatatttgcagggattaaaac 10748564  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||||||| ||||| | ||| |||| |||||||||    
T  10748563 caaaaaaatatttttacagggactaaaaccaaaatgtcagatgtttgcagagactattttcatatttaa 10748495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 42705166 - 42705334
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||||||||| |||||| ||||| || | ||||||||  |||||||||    
T  42705166 atattacaaggaccaaatccaatatgaatcaattttacaaggattaaaacaaaataccaaggtccaaaaccaaattttttatatttgcactgactaaaac 42705265  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||||||| ||||||| |||||||||||||||||||| ||||| |||| |||||||||    
T  42705266 caaaaaaatatttttacagagactaaatccaaaatgtcagatatttgcagggactattttcatatttaa 42705334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 14379272 - 14379114
Alignment:
Q  31 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnta 130  Q
    |||||| | |||||||||   |||||||||||| |||| |||||||| ||||||||||| ||||| || |  |||||||||||||||||||       ||    
T  14379272 gaccaaatccaatatgaatcaattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaaccaaaaaaata 14379173  T
Q  131 tttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||    
T  14379172 tttttacagggactaaaaccaaaatgtcagatatttgcaaggactattttcatatttaa 14379114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 42705125 - 42705052
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaa 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42705125 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaaa 42705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 41594089 - 41593952
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||| || |||||||||||| |||||||||||| ||||| |||| |||||||||| |||||||||       |||||||||||||||||||||||    
T  41594089 attttacaaagactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaaccaaaaaaatatttttacagggactaaaacca 41593990  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||| |||||||||||| || || |||| || ||||||    
T  41593989 aaatatcagatatttgcaggaactattttcacatttaa 41593952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 3948533 - 3948365
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||| ||| ||||| || | |||||||||||||||||||    
T  3948533 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttgcagggactaaaac 3948434  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||| |||||||||||  |||||||||| |||||||  |||| |||| |||||||||    
T  3948433 caaaaaaatatttttatagggactaaaattaaaatgtcaggtatttgcatggactattttcatatttaa 3948365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 30432764 - 30432597
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| ||  || ||| ||||||||||||     
T  30432764 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttgtt-tttacagggactaaaat 30432666  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       || ||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||    
T  30432665 caaaaaaatacttttacagggactaaaaccaaaatgtcagatatttgcagggactattttcacatttaa 30432597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 7877493 - 7877324
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  7877493 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 7877394  T
Q  121 c-nnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |        |||||||||||| |||| || ||||||||  ||||||||| ||||| |||| |||||||||    
T  7877393 caaaaaaaatatttttacaggaactacaatcaaaatgtatgatatttgcagggactattttcatatttaa 7877324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 33940819 - 33940682
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||| || | |||||||||| ||||||||        |||||||||||||||||||| ||    
T  33940819 attttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaactaaaaaaatatttttacagggactaaaatca 33940720  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||| |||||||||| ||||| |||| |||||||||    
T  33940719 aaatgtaagatatttgcagggactattttcatatttaa 33940682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 3371547 - 3371684
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||| || | |||||||||||||||||||        ||||||||| |||||||||||||    
T  3371547 attttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaactaaaaaaatatttttactgggactaaaacca 3371646  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||  ||||| | | ||| |||| |||||||||    
T  3371647 aaatgtcacgtatttactgagacaattttcatatttaa 3371684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 6880142 - 6880042
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||||| ||||||| | |||||||||   |||||||| ||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  6880142 atattataaggaccaaatccaatatgaataaattttacatggactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 6880043  T
Q  121 c 121  Q
    |    
T  6880042 c 6880042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 19204838 - 19204975
Alignment:
Q  53 ttttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa-ccnnnnnnntatttttacagggactaaaacca 151  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||          |||||||||| ||||||||||||    
T  19204838 ttttacaagtattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaaatatttttacaaggactaaaacca 19204937  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||| | ||||||| | ||||| |||| |||||||||    
T  19204938 aaatgacggatatttacagggactattttcatatttaa 19204975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 13572685 - 13572853
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||| |||| |||  |||||| ||||| || | ||||||| |||||||||||    
T  13572685 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatatacaaagtgccaaaatcaaattttttatatttgctgggactaaaac 13572784  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||| |||||||||||||||| ||||||||  | || |||| |||||||||    
T  13572785 caaaaaaatatttttacagggattaaaaccaaaatgtcatatatttgcaagaactattttcatatttaa 13572853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 37609125 - 37608958
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  |||||||||||||||||||||||| ||||| || | |||||||| ||||||||      
T  37609125 atattacaaggaccaaatccaatatgaatcaattttacaaggacaaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaca 37609026  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||| ||| |||||||||||||||||||||| ||||| |||||  ||| |||||||||    
T  37609025 caaaaaattatttttccagtgactaaaaccaaaatgtcagat-tttgcagggacttttttcatatttaa 37608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 17457887 - 17457729
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | ||||||||| | |||||||||||| |||||||||||| |||||||||||| | ||| || | |||||||||| |||||||     
T  17457887 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggaccaaaacctaattttttatatttgcaggaactaaaat 17457788  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccattt 179  Q
            | |||||||||| |||||||||||||| ||| |||||||| ||||| ||||    
T  17457787 aaattttttttttttacaggaactaaaaccaaaatttcaaatatttgcagggactattt 17457729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 32521706 - 32521837
Alignment:
Q  38 ttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac-cnnnnnnntattttta 136  Q
    |||||||||||   ||||||||||||  ||||||||||| |||||||||||| ||||| || | |||||||||||| ||||||         ||||||||    
T  32521706 ttcaatatgaatcaattttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggattaaaactaaaaaaaatattttta 32521805  T
Q  137 cagggactaaaaccaaaatgtcagatatttgc 168  Q
    |||||||||||||||||||||||  |||||||    
T  32521806 cagggactaaaaccaaaatgtcaattatttgc 32521837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 6164056 - 6163969
Alignment:
Q  32 accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||| |||||||||||   |||||||||||| |||||||||||||||||||||||||  |||| || | ||||||||| ||| ||||    
T  6164056 accaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaactaaattttttatatttgcagagacaaaaa 6163969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 6880055 - 6880003
Alignment:
Q  137 cagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  6880055 cagggactaaaaccaaaatgtcagatatttgtagggacaattttcatatttaa 6880003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 13278110 - 13278065
Alignment:
Q  145 aaaaccaaaatgtcagatatttgc-ggggaccatttccatatttaa 189  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  13278110 aaaaccaaaacgtcagatatttgcaggggaccatttccatatttaa 13278065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18910050 - 18910106
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaa 74  Q
    |||| |||||||  ||||||||| ||||| ||||||||||| ||||||||||||||||    
T  18910050 atgattattataaagaccaattt-aatattaaatgattttataaggattaaaacaaaa 18910106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 26239075 - 26239116
Alignment:
Q  78 caaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    |||||||||||||||||| || ||| ||||||||||||||||    
T  26239075 caaggaccaaaaacaaattttttttttttgcagggactaaaa 26239116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 25318485 - 25318417
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 89  Q
    |||||| | ||||||| |||||||||||   |||||| |||||  ||||||||||| ||||||||||||    
T  25318485 atattacaaggaccaaattcaatatgaatcaattttataaggacaaaaacaaaatatcaaggaccaaaa 25318417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 4156 - 3984
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||    
T  4156 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttctatatttacagggacta 4057  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  4056 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 3984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 4227 - 4364
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       |||||||||||||||||||||||    
T  4227 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 4326  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||| ||||| |||| |||||||||    
T  4327 aaatgtcagatatttgcagggactattttcatatttaa 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 116; Significance: 8e-59; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 212622 - 212794
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||||||||    
T  212622 atgaatattataggaaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaagaccaaaaccaaatattctatatttgcagggacta 212721  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  212722 aaaccaaaaaaatatttttatagggactaaaaccaaaacatcagatatttacggggaccatttccatatttaa 212794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 212581 - 212413
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||  || || ||||||||||||| ||||    
T  212581 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttaatttgcagggacttaaac 212482  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  212481 caaaaaaatatttttacagggactaaaaccaaaatgtctgatatttgcggggactattttcatatttaa 212413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 4597 - 4769
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  4597 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggacta 4696  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||        |  |||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  4697 aaaccaaaaaaaaaaatttatagggactaaaaccaaaacgtcaaatatttgcagggaccatttccatatttaa 4769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 25296 - 25124
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||    
T  25296 atgaatattataggaaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaaccaaatattctatatttacagggacta 25197  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||       |||||||| ||||||||||||||||| |||| ||||||   |||||||||| |||||||||    
T  25196 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtcaaatatttattgggaccattttcatatttaa 25124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 25356 - 25458
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| ||| || |||||||||||||||||||       |||||||||||||||||||||||    
T  25356 attttacaaggactaaaataaaataccaaggaccaaaaccaaaaatttttaatttgcagggactaaaaccaaaaaattatttttacagggactaaaacca 25455  T
Q  152 aaa 154  Q
    |||    
T  25456 aaa 25458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 25459 - 25518
Alignment:
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||    
T  25459 atttttacagggactaaaaccaaaatatcagatatttgcggggactattttcatatttaa 25518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 8752 - 8922
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  8752 atgaatattttagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 8851  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatattt 187  Q
    ||||        |||||||| |||||||||| |||||| | || |||| | ||||||||||||||||||||    
T  8852 aaacaaaaaaaatatttttatagggactaaatccaaaacgccaaatatatacggggaccatttccatattt 8922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 8680 - 8542
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggact-aaaacc 150  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||||||       |||||||||||||||| ||||||    
T  8680 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaacc 8581  T
Q  151 aaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||| |||||||||| ||||| |||| |||||||||    
T  8580 aaaatgttagatatttgcagggacaattttcatatttaa 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 43487 - 43660
Alignment:
Q  17 atgaatattataggg-accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggact 115  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  43487 atgaatattataggggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggact 43586  T
Q  116 aaaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||        |  |||| ||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  43587 aaaaccaaaaaaaaaaatttataggaactaaaaccaaaacgccagatatttgcaagaaccatttccatatttaa 43660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 43446 - 43278
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||| | ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  43446 atattacaaggaccaaatccaatatgaatcaattttacaagtactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 43347  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
            ||||||||||||||||||||||||||||||| |||||||| ||||| |||| || ||||||    
T  43346 aaaaaatatatttttacagggactaaaaccaaaatgtcaaatatttgcagggactattttcacatttaa 43278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 36204 - 36375
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggacta 116  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||    
T  36204 atgaatattataaggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcaggaacta 36303  T
Q  117 aaaccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||| |       || ||||| |||||||||||| |||| ||||||||||||| ||||| ||||  ||||||||    
T  36304 aaa-caaaaaaataattttatagggactaaaactaaaacgtcagatatttgcagggactatttttatatttaa 36375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 191
Target Start/End: Complemental strand, 36132 - 35993
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| |||||||||||| ||| |||||||| ||||| || | |||||||| |||||||||||       |||| |||||  ||  ||||| |    
T  36132 attttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgcaaggactaaaaccaaaacaatattcttacaaagatcaaaacga 36033  T
Q  152 aaatgtcagatatttgcggggaccatttccatatttaacc 191  Q
    ||||||||||||||||| || || || | |||||||||||    
T  36032 aaatgtcagatatttgcaggaactatattcatatttaacc 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 118198 - 118030
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaa 119  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||  ||||||||| ||||||||||||||||||    
T  118198 aatattatagggaccaatttcaatatgaaatgactttaca-ggattaaaacaaaatacaaaggatcaaaattaaatattctatatttgcagggactaaaa 118100  T
Q  120 ccnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||       ||||| ||  ||||||||| |||||| | ||||||||| | ||||||||||||||||||||    
T  118099 ccaaaaaaatatttatatggggactaaatccaaaacgccagatatttacagggaccatttccatatttaa 118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 118277 - 118393
Alignment:
Q  52 attttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnntatttttacagggactaaaacca 151  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || | ||||||||| ||||||||||       ||||||||||||||| |||||||    
T  118277 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacagggacgaaaacca 118376  T
Q  152 aaatgtcagatatttgc 168  Q
    |||| ||||||||||||    
T  118377 aaatatcagatatttgc 118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 36934 - 36768
Alignment:
Q  21 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaac 120  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  36934 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 36835  T
Q  121 cnnnnnnntatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |       ||||||  |||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  36834 caaaaaaatatttt--cagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 36768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 36975 - 37052
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaa 94  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36975 atgaatattatagggaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 37052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 37057 - 37117
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||    
T  37057 tatttttatagggactaaaaccaaaacgctagatatttgcagggaccatttccatatttaa 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 74088 - 74007
Alignment:
Q  17 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatatt 98  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  74088 atgaatattatagggaccagttttaatatgaaatgattttataaggattaaaacaaaatacgaaggaccaaaaccaaatatt 74007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 74137 - 74295
Alignment:
Q  30 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaacaaatattctttatttgcagggactaaaaccnnnnnnnt 129  Q
    ||||||| | |||||||||   |||||||||||| ||||||||||||||||||||||||  ||||| || | ||||||||||||||||||||       |    
T  74137 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaagccaaattttttatatttgcagggactaaaaccaaaaaaat 74236  T
Q  130 atttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||  | ||||| |||||||||||| |||||||||| ||||| |||| |||||||||    
T  74237 attttttgaaggact-aaaccaaaatgttagatatttgcagggactattttcatatttaa 74295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 73994 - 73934
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| ||||| ||||||||||| | | ||||||||| ||||||||||||||||||||    
T  73994 tatttttatagggaataaaaccaaaacgccggatatttgcagggaccatttccatatttaa 73934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 43971 - 43911
Alignment:
Q  129 tatttttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    |||||||| | ||||||||||||||| | ||||||||||| ||||| ||||||||||||||    
T  43971 tatttttataaggactaaaaccaaaacgacagatatttgccgggactatttccatatttaa 43911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 43994 - 44050
Alignment:
Q  133 tttacagggactaaaaccaaaatgtcagatatttgcggggaccatttccatatttaa 189  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||  ||||||||    
T  43994 tttacagggactaaaaccaaaatgtcaaatatttgcagggactatttttatatttaa 44050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 11348 - 11299
Alignment:
Q  20 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaa 69  Q
    |||||| ||| |||||||||| |||||||||||||| ||||||| |||||    
T  11348 aatattgtagagaccaatttcgatatgaaatgatttcacaaggactaaaa 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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