View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_low_26 (Length: 316)
Name: NF4586_low_26
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 37 - 297
Target Start/End: Original strand, 39267423 - 39267683
Alignment:
| Q |
37 |
atacaaatatcaaatgtgaagttccatgagagatatttgatgaaagcatgaaggaagtgtgaggctctagtattgcaatgcagcgtctgaaactcacaac |
136 |
Q |
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| T |
39267423 |
atacaaatatcaaatgtgaagttccatgagagatatttgatgaaagcatgaaggaagtgtgaggctctagtattgcaatgcagcgtctgaaactcacaac |
39267522 |
T |
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| Q |
137 |
gttgagactctcacccttacatttctctctcacttccttcaaacctataagatctttctcttcttcaaccatttctccctggtctggtctccattcatgg |
236 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39267523 |
gttgagactctcacccttacatttctctctcacttccttcaaacctataagatgtttctcttcttcaaccatttctccctggtctggtctccattcatgg |
39267622 |
T |
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| Q |
237 |
cgaaacagtcctctcaaccaaaatcgcaagtggggtccactttctcctcaacccgaaccta |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39267623 |
cgaaacagtcctctcaaccaaaatcgcaagtggggtccactttctcctcaacccgaaccta |
39267683 |
T |
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