View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4586_low_37 (Length: 269)

Name: NF4586_low_37
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4586_low_37
NF4586_low_37
[»] chr5 (19 HSPs)
chr5 (18-249)||(10865165-10865396)
chr5 (36-99)||(17097812-17097875)
chr5 (23-100)||(30640787-30640864)
chr5 (48-98)||(32872920-32872970)
chr5 (36-100)||(8920075-8920139)
chr5 (35-98)||(18511805-18511868)
chr5 (36-98)||(611863-611925)
chr5 (36-98)||(8675443-8675505)
chr5 (36-98)||(18660758-18660819)
chr5 (36-98)||(19981996-19982058)
chr5 (58-100)||(22402658-22402700)
chr5 (23-97)||(35634834-35634907)
chr5 (23-97)||(41175703-41175777)
chr5 (36-97)||(3263519-3263579)
chr5 (52-97)||(4771497-4771542)
chr5 (58-99)||(42446323-42446364)
chr5 (21-97)||(31748336-31748412)
chr5 (18-98)||(35075568-35075648)
chr5 (35-95)||(41724191-41724251)
[»] chr3 (29 HSPs)
chr3 (23-98)||(50559209-50559284)
chr3 (23-96)||(47101523-47101596)
chr3 (36-96)||(48789328-48789388)
chr3 (18-97)||(14207250-14207329)
chr3 (18-97)||(14214998-14215077)
chr3 (23-98)||(25641568-25641642)
chr3 (23-98)||(48405409-48405484)
chr3 (23-97)||(6178423-6178496)
chr3 (23-97)||(51137033-51137107)
chr3 (23-99)||(8821628-8821704)
chr3 (23-99)||(10811133-10811209)
chr3 (36-100)||(38944152-38944215)
chr3 (23-98)||(21196123-21196198)
chr3 (48-99)||(42683825-42683876)
chr3 (18-89)||(43158263-43158334)
chr3 (23-98)||(49417574-49417649)
chr3 (18-97)||(51343408-51343487)
chr3 (23-97)||(22371191-22371265)
chr3 (38-100)||(26645023-26645085)
chr3 (36-98)||(46019461-46019523)
chr3 (36-97)||(1295332-1295392)
chr3 (18-98)||(1340172-1340249)
chr3 (36-97)||(30567970-30568031)
chr3 (57-98)||(32146017-32146058)
chr3 (39-96)||(48789613-48789670)
chr3 (48-97)||(51873393-51873442)
chr3 (23-99)||(41637277-41637353)
chr3 (23-99)||(44677481-44677557)
chr3 (60-96)||(48281888-48281924)
[»] chr7 (17 HSPs)
chr7 (23-94)||(24532940-24533011)
chr7 (23-99)||(41018661-41018737)
chr7 (37-94)||(2300082-2300139)
chr7 (23-99)||(33180707-33180783)
chr7 (18-97)||(22638876-22638955)
chr7 (36-99)||(37899321-37899384)
chr7 (23-98)||(47448825-47448900)
chr7 (37-99)||(8904418-8904480)
chr7 (36-98)||(12007196-12007258)
chr7 (36-98)||(44184569-44184631)
chr7 (29-98)||(21822602-21822671)
chr7 (23-96)||(23910248-23910321)
chr7 (18-99)||(37899205-37899286)
chr7 (36-100)||(13437195-13437258)
chr7 (38-98)||(30061280-30061340)
chr7 (18-98)||(35192266-35192346)
chr7 (38-98)||(37352109-37352169)
[»] chr4 (27 HSPs)
chr4 (23-94)||(32303282-32303353)
chr4 (36-97)||(32546367-32546428)
chr4 (18-97)||(17367351-17367430)
chr4 (23-98)||(56557732-56557807)
chr4 (35-97)||(14443198-14443260)
chr4 (46-99)||(51852074-51852127)
chr4 (36-100)||(35017150-35017213)
chr4 (29-97)||(56271360-56271428)
chr4 (59-98)||(33278674-33278713)
chr4 (36-98)||(39449172-39449232)
chr4 (18-96)||(2401611-2401689)
chr4 (23-97)||(21617183-21617257)
chr4 (36-98)||(38864746-38864808)
chr4 (36-98)||(42815403-42815465)
chr4 (36-106)||(45851751-45851821)
chr4 (36-98)||(51255745-51255807)
chr4 (48-97)||(1816022-1816071)
chr4 (36-97)||(14593828-14593889)
chr4 (57-98)||(44626604-44626645)
chr4 (36-97)||(51887663-51887724)
chr4 (23-100)||(56474761-56474838)
chr4 (67-99)||(4914904-4914936)
chr4 (59-99)||(22257229-22257269)
chr4 (36-100)||(45082978-45083041)
chr4 (59-99)||(47014937-47014977)
chr4 (38-98)||(50050637-50050696)
chr4 (56-100)||(51359820-51359864)
[»] chr8 (25 HSPs)
chr8 (36-97)||(5600997-5601058)
chr8 (36-97)||(5639562-5639623)
chr8 (36-97)||(35153015-35153076)
chr8 (23-97)||(16613634-16613708)
chr8 (23-97)||(34718115-34718189)
chr8 (29-98)||(4658266-4658335)
chr8 (23-99)||(9549196-9549272)
chr8 (36-99)||(3946238-3946301)
chr8 (23-98)||(5277701-5277776)
chr8 (23-98)||(33605075-33605150)
chr8 (52-98)||(5771902-5771948)
chr8 (23-97)||(7598708-7598782)
chr8 (23-97)||(31249522-31249595)
chr8 (36-97)||(18651370-18651431)
chr8 (36-97)||(26026896-26026957)
chr8 (52-97)||(29991412-29991457)
chr8 (36-97)||(34018808-34018869)
chr8 (37-98)||(34435748-34435809)
chr8 (59-96)||(40528749-40528786)
chr8 (36-97)||(45405994-45406055)
chr8 (18-94)||(3547152-3547228)
chr8 (59-99)||(17775462-17775502)
chr8 (36-100)||(36064027-36064090)
chr8 (23-103)||(38708293-38708373)
chr8 (36-96)||(44061718-44061778)
[»] chr6 (14 HSPs)
chr6 (23-96)||(26595350-26595422)
chr6 (23-98)||(17551376-17551451)
chr6 (36-98)||(34442073-34442135)
chr6 (36-97)||(35213571-35213632)
chr6 (38-98)||(15318200-15318260)
chr6 (36-98)||(15368833-15368895)
chr6 (52-98)||(33421759-33421805)
chr6 (36-97)||(754448-754509)
chr6 (57-98)||(27334857-27334898)
chr6 (57-98)||(27395597-27395638)
chr6 (18-98)||(2242014-2242094)
chr6 (36-100)||(3610971-3611035)
chr6 (38-98)||(8505786-8505846)
chr6 (37-97)||(18065101-18065161)
[»] chr1 (27 HSPs)
chr1 (23-99)||(9566958-9567034)
chr1 (23-99)||(34008178-34008254)
chr1 (52-98)||(37588701-37588747)
chr1 (38-98)||(26585186-26585245)
chr1 (36-96)||(30658858-30658918)
chr1 (23-99)||(31826948-31827024)
chr1 (36-100)||(32926256-32926320)
chr1 (23-99)||(47214206-47214282)
chr1 (35-98)||(15083060-15083122)
chr1 (36-99)||(45008174-45008237)
chr1 (36-103)||(46911287-46911354)
chr1 (23-98)||(51286364-51286439)
chr1 (36-98)||(4213071-4213133)
chr1 (36-98)||(18610772-18610833)
chr1 (18-99)||(19442504-19442590)
chr1 (36-98)||(32915082-32915144)
chr1 (23-101)||(43367899-43367977)
chr1 (36-98)||(48983678-48983740)
chr1 (23-97)||(49020401-49020475)
chr1 (23-100)||(33024568-33024645)
chr1 (23-96)||(33054085-33054158)
chr1 (52-97)||(44789169-44789214)
chr1 (36-97)||(47642617-47642678)
chr1 (23-99)||(1852948-1853024)
chr1 (36-100)||(7171246-7171310)
chr1 (18-98)||(21433393-21433473)
chr1 (36-100)||(32873338-32873401)
[»] chr2 (27 HSPs)
chr2 (23-98)||(38821365-38821440)
chr2 (24-94)||(9051933-9052002)
chr2 (23-101)||(37077785-37077863)
chr2 (36-100)||(26481100-26481164)
chr2 (36-100)||(35589397-35589461)
chr2 (52-100)||(39449143-39449191)
chr2 (23-98)||(2841833-2841908)
chr2 (36-99)||(36383460-36383522)
chr2 (23-98)||(36802895-36802970)
chr2 (23-98)||(44254598-44254673)
chr2 (36-98)||(14876956-14877018)
chr2 (25-98)||(17569703-17569777)
chr2 (23-97)||(18723594-18723668)
chr2 (37-99)||(28244443-28244505)
chr2 (23-97)||(28245728-28245802)
chr2 (18-96)||(44530674-44530752)
chr2 (36-97)||(3091741-3091801)
chr2 (28-97)||(8427552-8427621)
chr2 (23-100)||(18176937-18177014)
chr2 (58-99)||(18510673-18510714)
chr2 (21-97)||(19642596-19642673)
chr2 (37-98)||(37731211-37731272)
chr2 (21-98)||(40358107-40358184)
chr2 (23-100)||(41042251-41042327)
chr2 (36-97)||(44287451-44287511)
chr2 (18-94)||(9194432-9194508)
chr2 (46-98)||(31296535-31296587)
[»] scaffold0036 (1 HSPs)
scaffold0036 (28-98)||(18003-18072)
[»] scaffold0005 (1 HSPs)
scaffold0005 (36-97)||(223489-223550)
[»] scaffold0662 (1 HSPs)
scaffold0662 (59-99)||(1076-1116)


Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 10865396 - 10865165
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctatctatttttaccggctaa 117  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  10865396 aaatgaaaacataatgtaagtatgagataaaaaattgtcacaaaagttctcacaaaatgtttgttcaaatatcatttctctatccatttttactggctaa 10865297  T
Q  118 tccgacaacatacatacctcaatatgatgtacgagttctcgttctgatgggtttgacgacacctagaatagccatcaattatgttagggaacatcatatg 217  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10865296 tcccacaacatacatacctcaatatgatgtacgagttctcgttctgatgggtttgaagacacctagaatagccatcaattatgttagggaacatcatatg 10865197  T
Q  218 gattaataatccactttacacgtatagtactt 249  Q
    ||||||||||||||||||||||||||||||||    
T  10865196 gattaataatccactttacacgtatagtactt 10865165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 17097812 - 17097875
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||||| |||||||| ||||||||| ||| |||||  ||||||||||||||||||||||    
T  17097812 agtatgagatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctcta 17097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 30640864 - 30640787
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||| |||||| || ||||||| | ||| |||||||||||||| |||||||||   ||||||||||||||||||||||    
T  30640864 aaaaaataatgtaaatatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctctat 30640787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 32872920 - 32872970
Alignment:
Q  48 aaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||| ||||||||| ||| |||||| |||||||||||||||||||||    
T  32872920 aaaattgtcacaaaagttgtcaaaaaatagttgttcaaatatcatttctct 32872970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 8920139 - 8920075
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | ||| |||| ||||||||| |||||||||   ||||||||||||||||||||||    
T  8920139 agtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctat 8920075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 18511805 - 18511868
Alignment:
Q  35 aagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||| | ||||||||| ||||| || |||||||||   ||||||||||||||||||||    
T  18511805 aagtatgagagagaaaattgtagcaaaaattatcacaaaatgaatgttcaaatatcatttctct 18511868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 611925 - 611863
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| ||| || |||||||||||||||||||||    
T  611925 agtatgagagagaaagttgtcacaaaagttgtcaaaaagtaattgttcaaatatcatttctct 611863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 8675443 - 8675505
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||||||||  |||||||| |||||||||   ||||||||||||||||||||    
T  8675443 agtatgagagagaaaattgttgcaaaagttatcacaaaatggatgttcaaatatcatttctct 8675505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 18660819 - 18660758
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | |||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  18660819 agtatgagagagaaaattgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctct 18660758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 19981996 - 19982058
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| |||||||||| |||||| || ||| |||||  ||||| |||||||||||||||    
T  19981996 agtatgagagaaaaaattgtcacaaaaattatcaaaaaatgattgttaaaatatcatttctct 19982058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 22402658 - 22402700
Alignment:
Q  58 caaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||||||| ||||||||||  ||||||||||||||||||||||    
T  22402658 caaaagttgtcacaaaataaatgttcaaatatcatttctctat 22402700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 35634834 - 35634907
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| |||||| |||||| ||| | ||| |||||||||||||| ||| |||||  ||||||||||||||||||||    
T  35634834 aaaagataatgtaagtataagagagaaagttgtaacaaaagttgtca-aaaatgattgttcaaatatcatttctc 35634907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 41175703 - 41175777
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| | ||| |||| ||||||||| || |||||||  |||||||||||||||||||    
T  41175703 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttatcccaaaatagatgttcaaatatcatttctc 41175777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 3263519 - 3263579
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| ||||||||||| |||||||| ||||||| |  |||| |||||||||||||||    
T  3263519 agtatgagagaaaaaattgta-caaaagttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 4771542 - 4771497
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||| ||||| || ||||||||||| |||||||||||||||||||    
T  4771542 ttgtagcaaaatttgtcacaaaatatatgttcaaatatcatttctc 4771497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 42446323 - 42446364
Alignment:
Q  58 caaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  42446323 caaaagttgtcaaaaaatagttgttcaaatatcatttctcta 42446364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 31748412 - 31748336
Alignment:
Q  21 tgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||| |||||  |||||| ||| ||||| |||| ||||||||| | | |||||| |||| |||||||||||||||    
T  31748412 tgaaaagataatagaagtataagagaaaaagttgtcacaaaagttgtaaaaaaatagttgtacaaatatcatttctc 31748336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 35075568 - 35075648
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| |||| ||||||  ||||||||| ||||| |||| |||  |||| ||| |||||  |||||||||||||||||||||    
T  35075568 aaataaaaatataatgtgagtatgagagaaaaagttgtcacatcagttgtcaaaaaatgattgttcaaatatcatttctct 35075648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 41724251 - 41724191
Alignment:
Q  35 aagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttc 95  Q
    |||||||||| |||||||||| ||||||||| |||  |||||  |||||||||||| ||||    
T  41724251 aagtatgagagaaaaaattgtcacaaaagttgtcagtaaataaatgttcaaatatcgtttc 41724191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 50559209 - 50559284
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||||| |||||||||| | |||||||| ||||||||| ||| |||||| |||| ||||||||||||||||    
T  50559209 aaaacataatgtaagtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttctct 50559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 47101596 - 47101523
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    ||||||| |||||||||||||||| ||| |||  ||||||||| |||||||||  |||| ||||||||||||||    
T  47101596 aaaacatgatgcaagtatgagatagaaagttgccacaaaagttgtcacaaaatggttgtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 48789388 - 48789328
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    ||||||||||||||| |||| |||||| || ||| |||||| |||||||||||||||||||    
T  48789388 agtatgagataaaaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 14207250 - 14207329
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||| ||||||||  ||||||||| | ||| |||| ||||||||| | |||||||  ||||||||||||||||||||    
T  14207250 aaatgaagacataatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctc 14207329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 14214998 - 14215077
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||| ||||||||  ||||||||| | ||| |||| ||||||||| | |||||||  ||||||||||||||||||||    
T  14214998 aaatgaagacataatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttctc 14215077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 25641568 - 25641642
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||||  ||||||||| | ||| ||||| |||||||| ||| |||||| |||||||||||||||||||||    
T  25641568 aaaacataatgtgagtatgagagacaaagttgtagcaaaagttgtca-aaaataattgttcaaatatcatttctct 25641642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 48405484 - 48405409
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||||  ||||||||| | ||| |||| ||||||||| |||||||||  |||| ||||||||||||||||    
T  48405484 aaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 6178423 - 6178496
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||||  ||||||||| | |||||||| ||||||||| ||| |||||| |||| |||||||||||||||    
T  6178423 aaaacataatgtgagtatgagagagaaaattgtcacaaaagttgtca-aaaatagttgtacaaatatcatttctc 6178496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 51137033 - 51137107
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||||| |||| ||||| ||||| |||| ||||||||| | | |||||| |||| |||||||||||||||    
T  51137033 aaaacataatgtaagtctgagagaaaaagttgtcacaaaagttattaaaaaatagttgtacaaatatcatttctc 51137107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 8821704 - 8821628
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||| | ||| |||| ||||||||| |||| |||||  |||||||||||||||||||||    
T  8821704 aaaaaataatgtgagtatgagagagaaagttgttacaaaagttgtcactaaatagatgttcaaatatcatttctcta 8821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 10811209 - 10811133
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||| ||||  ||||||||| | ||| |||| ||||||||| ||| |||||  ||||||||||||||||||||||    
T  10811209 aaaacacaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctcta 10811133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 38944152 - 38944215
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | ||||||||| |||||||| ||||||| || |||| ||||||||||||||||||    
T  38944152 agtatgagagagaaaattgta-caaaagttgtcacaaattagttgtacaaatatcatttctctat 38944215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 21196198 - 21196123
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| |||||| |||||||||| | ||| |||| ||| ||||| |||||||||   ||||||||||||||||||||    
T  21196198 aaaaaataatgtaagtatgagagagaaagttgtcacagaagttgtcacaaaatggatgttcaaatatcatttctct 21196123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 42683876 - 42683825
Alignment:
Q  48 aaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||||||||| || |||||||||   |||||||||||||||||||||    
T  42683876 aaaattgtaacaaaaattatcacaaaatgaatgttcaaatatcatttctcta 42683825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 43158263 - 43158334
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatat 89  Q
    |||| ||||||||||  || ||||||| |||||||||| |||| |||| ||| |||||| ||||||||||||    
T  43158263 aaataaaaacataataaaaatatgagagaaaaaattgtcacaatagttgtcaaaaaataattgttcaaatat 43158334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 49417649 - 49417574
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||||  ||||||||| | ||| |||| ||||||||| ||| ||||||  ||||||||||||||||||||    
T  49417649 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctct 49417574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 51343487 - 51343408
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| |||| |||||| |||||||||| | |||||||| ||||||||| |||  |||||  ||||||||||||| |||||    
T  51343487 aaattaaaagataatgtaagtatgagagagaaaattgtcacaaaagttgtcatcaaatagatgttcaaatatcacttctc 51343408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 22371265 - 22371191
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| |||||| |||||||||| | |||||| | ||||||||| |||| ||||   |||||||||||||||||||    
T  22371265 aaaaaataatgtaagtatgagagagaaaattattacaaaagttatcactaaatggatgttcaaatatcatttctc 22371191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 26645085 - 26645023
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||| ||||| ||||  |||||||| ||| ||||||  ||||||||||||||||||||||    
T  26645085 tatgagagaaaaagttgtcgcaaaagttatcataaaataggtgttcaaatatcatttctctat 26645023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 46019523 - 46019461
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| || |||||||  ||||||||||||||||||||    
T  46019523 agtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctct 46019461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 1295392 - 1295332
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| ||||| ||||  |||||||| |||||||||| |||| |||||||||||||||    
T  1295392 agtatgagagaaaaagttgtc-caaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 1340172 - 1340249
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||||| ||||  ||||||||| ||||| |||| | ||||||||  |||||||  |||||||||||||||||||||    
T  1340172 aaatgaaaacacaatgtgagtatgaga-aaaaagttgtcataaaagttc--acaaaattgttgttcaaatatcatttctct 1340249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 30567970 - 30568031
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||| | ||||| |||| | ||||||| ||||||||||  |||||||||||||||||||    
T  30567970 agtatgaaagaaaaagttgtcataaaagttgtcacaaaataaatgttcaaatatcatttctc 30568031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 32146017 - 32146058
Alignment:
Q  57 acaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| ||| |||||| |||||||||||||||||||||    
T  32146017 acaaaagttgtcaaaaaatagttgttcaaatatcatttctct 32146058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 48789670 - 48789613
Alignment:
Q  39 atgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    |||| ||||||| |||| |||||| || ||| |||||| |||||||||||||||||||    
T  48789670 atgaaataaaaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 51873442 - 51873393
Alignment:
Q  48 aaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||| | |||| || |||||||||| ||||||||||||||||||||    
T  51873442 aaaattgtcataaaaattgtcacaaaatagttgttcaaatatcatttctc 51873393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 41637277 - 41637353
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||||| | ||||| || | ||| |||| ||||||||| ||| |||||| |||| ||||||||| |||||||    
T  41637277 aaaacataatgtatgtatgtgagagaaagttgtcacaaaagttgtcaaaaaatagttgtacaaatatcacttctcta 41637353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 44677481 - 44677557
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||| | ||||||||  |||||||| |||| ||||   |||||||||||||||||||||    
T  44677481 aaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcta 44677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 48281888 - 48281924
Alignment:
Q  60 aaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  48281888 aaagttgtcacaaaatatatgttcaaatatcatttct 48281924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 24532940 - 24533011
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcattt 94  Q
    |||||||||||  ||||||||| |||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  24532940 aaaacataatgtgagtatgagagaaaaaattgtcacaaaaattatcagaaaatagttgttcaaatatcattt 24533011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 41018737 - 41018661
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||||| ||| |||| ||||||||| ||  |||||| ||||||||||||||||||||||    
T  41018737 aaaatataatgtgagtatgagatagaaagttgtcacaaaagttgtccaaaaatagttgttcaaatatcatttctcta 41018661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 2300139 - 2300082
Alignment:
Q  37 gtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcattt 94  Q
    |||||||||| ||| ||||||||||| || ||| |||||| |||||||||||||||||    
T  2300139 gtatgagatagaaagttgtaacaaaaattgtcataaaatagttgttcaaatatcattt 2300082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 33180707 - 33180783
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||| | |||||||| | ||||||| |||||||||   |||||||||||||||||||||    
T  33180707 aaaaaataatgtgagtatgagagagaaaattgtcataaaagttgtcacaaaatgaatgttcaaatatcatttctcta 33180783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 22638876 - 22638955
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||| || |||||| |||||||| | | ||| |||| ||||||||| ||| ||||||  |||||||||||||||||||    
T  22638876 aaatgagaatataatgtaagtatgaaagagaaatttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctc 22638955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 37899384 - 37899321
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||| | ||| |||| ||||||||| |||||||||   |||||||||||||||||||||    
T  37899384 agtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctcta 37899321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 47448900 - 47448825
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| ||||  ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  47448900 aaaacacaatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 47448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 8904418 - 8904480
Alignment:
Q  37 gtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||| | |||||||| |||||| || ||||||||   ||||||||||||||||||||||    
T  8904418 gtatgagagagaaaattgtcacaaaaattatcacaaaacggttgttcaaatatcatttctcta 8904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 12007196 - 12007258
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  12007196 agtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 12007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 44184569 - 44184631
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| || |||||||  ||||||||||||||||||||    
T  44184569 agtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctct 44184631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 21822602 - 21822671
Alignment:
Q  29 taatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| ||||||||| | || |||||  ||||| || ||||||||||  ||||||||||||||||||||    
T  21822602 taatgcgagtatgagagagaacattgttgcaaaaattgtcacaaaatagatgttcaaatatcatttctct 21822671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 23910248 - 23910321
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    |||||||||||  | ||||||| |||| ||||| ||||||||| ||| |||||  |||| ||||||||||||||    
T  23910248 aaaacataatgtgaatatgagagaaaatattgtcacaaaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 37899205 - 37899286
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||| || || ||| |||||||||| | ||| |||| |||||| || |||||||||   |||||||||||||||||||||    
T  37899205 aaatgagaatatgatgtaagtatgagagagaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcatttctcta 37899286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 13437258 - 13437195
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| ||||| ||||  |||||||| |||||||||  |||| ||||||||||||||||||    
T  13437258 agtatgagagaaaaagttgtt-caaaagttgtcacaaaatggttgtgcaaatatcatttctctat 13437195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 30061340 - 30061280
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| | |||||||| |||||| || ||| |||||| ||||| |||||||||||||||    
T  30061340 tatgagagagaaaattgtcacaaaaattgtcaaaaaatagttgttaaaatatcatttctct 30061280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 35192266 - 35192346
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| || |||  ||||||||| |||||||| | | ||||||| |||||||||   ||||||||||| ||||||||    
T  35192266 aaatgaaaatatgatgtgagtatgagagaaaaaattatcataaaagttgtcacaaaatggatgttcaaatattatttctct 35192346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 37352169 - 37352109
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| |||||||| | |||||| || ||| |||||  |||||||||||||||||||||    
T  37352169 tatgagagaaaaaattatcacaaaaattgtcaaaaaatggttgttcaaatatcatttctct 37352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 32303282 - 32303353
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcattt 94  Q
    ||||||||||||||||||| ||  ||||||||| |||||| || |||||||||| |||| ||||||||||||    
T  32303282 aaaacataatgcaagtatgtgaggaaaaattgttacaaaaattatcacaaaatagttgtacaaatatcattt 32303353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 32546367 - 32546428
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| ||||| ||||||||||| || ||||||||||  |||||||||||||||||||    
T  32546367 agtatgagagaaaaagttgtaacaaaaattgtcacaaaataaatgttcaaatatcatttctc 32546428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 17367351 - 17367430
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||||||||| || ||||||| | |||||| | | |||||||  ||||||||| |||||||||||||| |||||    
T  17367351 aaatgaaaacataatgtaaatatgagaaagaaaattatcataaaagttgacacaaaataattgttcaaatatcaattctc 17367430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 56557807 - 56557732
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| ||||  ||||||||| | |||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  56557807 aaaacacaatgtgagtatgagagagaaaattgtcacaaaagttgtcataaaattgttgttcaaatatcatttctct 56557732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 14443260 - 14443198
Alignment:
Q  35 aagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||| | |||||||| ||||||||| ||| |||||  ||||||||||||||||||||    
T  14443260 aagtatgagagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctc 14443198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 51852127 - 51852074
Alignment:
Q  46 aaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||| |||| |||||| |||||||||||||  |||||||||||||||||||||    
T  51852127 aaaaagttgtcacaaaaattctcacaaaataaatgttcaaatatcatttctcta 51852074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 35017213 - 35017150
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | ||| |||||| ||||||| |||||||||| |||| ||||||||||||||||||    
T  35017213 agtatgagagataaagttgtaa-aaaagttgtcacaaaatagttgtacaaatatcatttctctat 35017150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 56271428 - 56271360
Alignment:
Q  29 taatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||||||| || ||||| |||| ||||||||| ||| |||||   |||||||||||||||||||    
T  56271428 taatgcaagtatgggagaaaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctc 56271360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 33278713 - 33278674
Alignment:
Q  59 aaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  33278713 aaaagttgtcacaaaatagttgttcaaatatcatttctct 33278674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 39449232 - 39449172
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| ||||||||||  |||||||| |||||||||| ||||  |||||||||||||||    
T  39449232 agtatgagagaaaaaattgt--caaaagttatcacaaaatagttgtataaatatcatttctct 39449172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2401689 - 2401611
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    ||||||||| || |||  ||||||||| | ||| |||| ||||||||| |||||||||   ||||||||||||||||||    
T  2401689 aaatgaaaatatgatgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 21617257 - 21617183
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| | ||| ||||||||||| || |||||||||   |||||||||||||||||||    
T  21617257 aaaaaataatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcatttctc 21617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 38864746 - 38864808
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| | ||||||| |||||||||| |||| ||||||||||||||||    
T  38864746 agtatgagagagaaagttgtcaaaaaagttgtcacaaaataattgtacaaatatcatttctct 38864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 42815465 - 42815403
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| | |||||||| |||| ||||||||||||||||    
T  42815465 agtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctct 42815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 45851821 - 45851751
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctatctattt 106  Q
    ||||||| | ||||| ||||||||||| || ||| |||||   ||||||||||||||||||||||| ||||    
T  45851821 agtatgaaagaaaaagttgtaacaaaaattgtcataaaattgatgttcaaatatcatttctctatcgattt 45851751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 51255807 - 51255745
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  51255807 agtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 51255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 1816022 - 1816071
Alignment:
Q  48 aaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||| |||||| || ||||||||||  |||||||||||||||||||    
T  1816022 aaaattgtcacaaaaattgtcacaaaatagatgttcaaatatcatttctc 1816071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 14593889 - 14593828
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||| ||| ||| |||||||||||||| |||||||||   | |||||||||||||||||    
T  14593889 agtatgaaatagaaagttgtaacaaaagttgtcacaaaatggatattcaaatatcatttctc 14593828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 44626645 - 44626604
Alignment:
Q  57 acaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| ||| |||||| |||||||||||||||||||||    
T  44626645 acaaaagttatcataaaatagttgttcaaatatcatttctct 44626604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 51887724 - 51887663
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | ||| ||||| |||||||| |||||||||   |||||||||||||||||||    
T  51887724 agtatgagagagaaagttgtagcaaaagttgtcacaaaatggatgttcaaatatcatttctc 51887663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 56474761 - 56474838
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||||||||||  ||||| ||| | |||||||| |||||| || | | |||||  |||||||||||||||||||||||    
T  56474761 aaaacataatgtgagtataagagagaaaattgtcacaaaaattgtaaaaaaatgattgttcaaatatcatttctctat 56474838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 4914936 - 4914904
Alignment:
Q  67 tcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||||| ||||||||||||||||||||||    
T  4914936 tcacaaaatagttgttcaaatatcatttctcta 4914904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 22257229 - 22257269
Alignment:
Q  59 aaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||| ||||||| || ||||||||||||||||||||||    
T  22257229 aaaagttgtcacaaagtagttgttcaaatatcatttctcta 22257269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 45083041 - 45082978
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | |||||| | ||||||||| ||| |||||  |||||||||||||||||||||||    
T  45083041 agtatgagagagaaaattatcacaaaagttgtca-aaaatggttgttcaaatatcatttctctat 45082978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 47014977 - 47014937
Alignment:
Q  59 aaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||| |||||||||| |||| |||||||||||||||||    
T  47014977 aaaagttgtcacaaaatagttgtacaaatatcatttctcta 47014937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 50050696 - 50050637
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| | |||||||| |||||| || ||| |||||| |||||||||||||||||||||    
T  50050696 tatgagagagaaaattgtcacaaaaattgtca-aaaataattgttcaaatatcatttctct 50050637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 51359820 - 51359864
Alignment:
Q  56 aacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||||||||| |||||||||  |||| ||||||||||||||||||    
T  51359820 aacaaaagttgtcacaaaatggttgtacaaatatcatttctctat 51359864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 5600997 - 5601058
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| |||||||||| ||||||||| ||| |||||  ||||||||||||||||||||    
T  5600997 agtatgagagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 5601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 5639623 - 5639562
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| |||||||||| ||||||||| ||| |||||  ||||||||||||||||||||    
T  5639623 agtatgagagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 5639562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35153076 - 35153015
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||||||||| ||||||||||| || | |||||||  ||||||||||||||||||||    
T  35153076 agtatgagataaaaagttgtaacaaaaattgttacaaaatgattgttcaaatatcatttctc 35153015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 16613708 - 16613634
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| ||||| ||||| ||||| || ||||||||||  |||||||||||||||||||    
T  16613708 aaaaaataatgtgagtatgagagaaaaagttgtagcaaaaattgtcacaaaatagatgttcaaatatcatttctc 16613634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 34718189 - 34718115
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| | ||| |||||||||||||| |||||||||   |||||||||||||||||||    
T  34718189 aaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctc 34718115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 4658266 - 4658335
Alignment:
Q  29 taatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||| |||||||||| ||||| |||| ||||||||| ||| |||||   ||||||||||||||||||||    
T  4658266 taatgtaagtatgagagaaaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctct 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 9549196 - 9549272
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||| | |||||||| ||||||||| |||||||||   |||||||||||||||| ||||    
T  9549196 aaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatggatgttcaaatatcatttttcta 9549272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 3946301 - 3946238
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||| | ||| |||| ||||||||| |||||||||   |||||||||||||||||||||    
T  3946301 agtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctcta 3946238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 5277701 - 5277776
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||||  ||||||||| | ||||||||| |||| ||| |||||||||   ||||||||||||||||||||    
T  5277701 aaaaaataatgtgagtatgagagagaaaattgtagcaaaggttgtcacaaaatggatgttcaaatatcatttctct 5277776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 33605075 - 33605150
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| ||||  ||||||||| | ||||||||  |||||||| ||| |||||  |||||||||||||||||||||    
T  33605075 aaaacacaatgtgagtatgagagagaaaattgttccaaaagttatcataaaatggttgttcaaatatcatttctct 33605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 5771902 - 5771948
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||||||| |||||||||  |||||||||||||||||||||    
T  5771902 ttgttacaaaagttgtcacaaaatggttgttcaaatatcatttctct 5771948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 7598782 - 7598708
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||||  ||||||||| | ||| | || ||||||||| ||| |||||  ||||||||||||||||||||    
T  7598782 aaaacataatgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 7598708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 31249522 - 31249595
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| |||||||||| ||||||||| | | |||||  ||||||||||||||||||||    
T  31249522 aaaagataatgtgagtatgagagaaaaaattgtcacaaaagttgtaa-aaaatggttgttcaaatatcatttctc 31249595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 18651431 - 18651370
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | |||||||| ||||||||| | || |||||  |||||||||||||||||||    
T  18651431 agtatgagagagaaaattgtcacaaaagttgttaccaaatagatgttcaaatatcatttctc 18651370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 26026957 - 26026896
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  ||||||||||||||||||||    
T  26026957 agtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctc 26026896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 29991457 - 29991412
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||||||| |||||||||   |||||||||||||||||||    
T  29991457 ttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctc 29991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 34018869 - 34018808
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | ||||||||  |||||||| ||| |||||  ||||||||||||||||||||    
T  34018869 agtatgagagagaaaattgttgcaaaagttgtcagaaaatggttgttcaaatatcatttctc 34018808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 34435748 - 34435809
Alignment:
Q  37 gtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||| | |||||||| ||||||||| ||| ||| |  |||||||||||||||||||||    
T  34435748 gtatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 34435809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 40528786 - 40528749
Alignment:
Q  59 aaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  40528786 aaaagttgtcacaaaatagttgttcaaatatcatttct 40528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 45405994 - 45406055
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| |||||||| | |||||| || | | |||||| ||||||||||||||||||||    
T  45405994 agtatgagagaaaaaattatcacaaaaattattaaaaaatagttgttcaaatatcatttctc 45406055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 3547152 - 3547228
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcattt 94  Q
    |||| ||||||||||| |||||||||| | ||| |||| ||||||||| ||| ||| |  |||| ||||||||||||    
T  3547152 aaataaaaacataatgtaagtatgagagataaagttgtgacaaaagttatcaaaaagtggttgtacaaatatcattt 3547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 17775462 - 17775502
Alignment:
Q  59 aaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||| |||||||||  ||||||||||||||||||||||    
T  17775462 aaaagttgtcacaaaatgattgttcaaatatcatttctcta 17775502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 36064090 - 36064027
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | ||||||||  |||||||| |||||||||  |||| ||||||||||||||||||    
T  36064090 agtatgagagagaaaattgtc-caaaagttgtcacaaaatgattgtacaaatatcatttctctat 36064027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 38708293 - 38708373
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctatcta 103  Q
    |||| ||||||  ||||| ||| | |||||||| |||||| || |||| |||||  ||||||||||||||||||| |||||    
T  38708293 aaaaaataatgtgagtataagaaagaaaattgttacaaaaattatcaccaaatagatgttcaaatatcatttctcaatcta 38708373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 44061778 - 44061718
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||    
T  44061778 agtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 26595422 - 26595350
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    |||||||||||  ||||||||| |||||||||| | ||||||| ||| |||||| |||||||||||||||||||    
T  26595422 aaaacataatgtgagtatgagagaaaaaattgttataaaagttatca-aaaatagttgttcaaatatcatttct 26595350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 17551376 - 17551451
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||||  ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  17551376 aaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 17551451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 34442073 - 34442135
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | |||||||| ||||||||| ||| |||||| ||| |||||||||||||||||    
T  34442073 agtatgagagagaaaattgtcacaaaagttgtcataaaatagttgctcaaatatcatttctct 34442135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 35213571 - 35213632
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | ||| |||| ||||||||| ||||||||||  |||||||||||||||||||    
T  35213571 agtatgagagagaaagttgttacaaaagttgtcacaaaatagatgttcaaatatcatttctc 35213632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 15318200 - 15318260
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| | ||| |||||||||||||| |||||||||   ||||||||||||||||||||    
T  15318200 tatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 15318260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 15368833 - 15368895
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||||||||||||| | |||||||   ||||||||||||||||||||    
T  15368833 agtatgagagagaaagttgtaacaaaagttgttacaaaatggatgttcaaatatcatttctct 15368895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 33421805 - 33421759
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||||||| |||||||||   ||||||||||||||||||||    
T  33421805 ttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 33421759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 754448 - 754509
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| ||||| ||||  |||||||| |||||||||   |||||||||||||||||||    
T  754448 agtatgagagaaaaagttgttgcaaaagttgtcacaaaatgaatgttcaaatatcatttctc 754509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 27334898 - 27334857
Alignment:
Q  57 acaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| |||||||||| |||| ||||||||||||||||    
T  27334898 acaaaagttgtcacaaaatagttgtacaaatatcatttctct 27334857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 27395638 - 27395597
Alignment:
Q  57 acaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| |||||||||| |||| ||||||||||||||||    
T  27395638 acaaaagttgtcacaaaatagttgtacaaatatcatttctct 27395597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 2242014 - 2242094
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||| |||||  ||||||||| | ||| |||| |||||| || ||| |||||  |||||||||||||||||||||    
T  2242014 aaataaaaacttaatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctct 2242094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 3610971 - 3611035
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| ||||| ||||  |||||||| |||| ||||   ||||||||||||||||||||||    
T  3610971 agtatgagagaaaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctctat 3611035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 8505786 - 8505846
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  8505786 tatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctct 8505846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 18065101 - 18065161
Alignment:
Q  37 gtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||| ||||| |||| ||||||||| ||| ||| |  ||||||||||||||||||||    
T  18065101 gtatgagagaaaaagttgtcacaaaagttgtcaaaaagtgattgttcaaatatcatttctc 18065161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 9566958 - 9567034
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||||||  ||||||||| | ||| |||| ||||||||| ||| |||||  ||||||||||||||||||||||    
T  9566958 aaaacataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctcta 9567034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 34008254 - 34008178
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||||| ||| |||| ||||||||| ||| ||||||  |||||||||||||||||||||    
T  34008254 aaaaaataatgtgagtatgagatagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctcta 34008178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 37588701 - 37588747
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  37588701 ttgtaacaaaagttgtcacaaaataaatgttcaaatatcatttctct 37588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 26585186 - 26585245
Alignment:
Q  38 tatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||| ||||| ||||| |||||||| |||||||||| |||| ||||||||||||||||    
T  26585186 tatgagagaaaaagttgta-caaaagttatcacaaaatagttgtacaaatatcatttctct 26585245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 30658858 - 30658918
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    ||||||| | ||||| |||||||||||||| |||||||||   ||||||||||||||||||    
T  30658858 agtatgaaagaaaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttct 30658918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 31827024 - 31826948
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||||||||||||||||| | ||| |||| |||||| || | | |||||  ||||||||||||| ||||||||    
T  31827024 aaaacataatgcaagtatgagagagaaagttgtcacaaaaattgtaaaaaaatggttgttcaaatatcctttctcta 31826948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 32926320 - 32926256
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| |||||||| | ||||||||| ||| |||||  |||||||||||||||||| ||||    
T  32926320 agtatgagagaaaaaattatcacaaaagttatcataaaatgattgttcaaatatcatttcactat 32926256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 47214282 - 47214206
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||| | ||| |||| ||||||||| ||| ||||||  |||||||||||||||||||||    
T  47214282 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctcta 47214206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 15083060 - 15083122
Alignment:
Q  35 aagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||| | |||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  15083060 aagtatgagagagaaaattgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctct 15083122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 45008174 - 45008237
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||| | ||| || | ||||||||| |||||||||| ||||| ||||||||||||||||    
T  45008174 agtatgagagagaaagttattacaaaagttgtcacaaaataattgttgaaatatcatttctcta 45008237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 46911354 - 46911287
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctatcta 103  Q
    ||||||| | ||||| |||||||||||||| |||||||||   |||| ||||||||||||||| ||||    
T  46911354 agtatgaaagaaaaagttgtaacaaaagttgtcacaaaatggatgttgaaatatcatttctctttcta 46911287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 51286364 - 51286439
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||||  ||||||||| | ||| |||| ||||||||| ||| ||||||  ||||||||||||||||||||    
T  51286364 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttctct 51286439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 4213133 - 4213071
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  4213133 agtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctct 4213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 18610833 - 18610772
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||||| ||||||| |||||||||| |||| ||||||||||||||||    
T  18610833 agtatgagagagaaagttgtaa-aaaagttgtcacaaaatagttgtacaaatatcatttctct 18610772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 19442590 - 19442504
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgta-----acaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||||||||||  ||||| ||| ||||||||||      | ||||||| |||||||||  ||||||||||||||||||||||    
T  19442590 aaatgaaaacataatgtgagtataagaaaaaaaattgttggtgtataaaagttgtcacaaaatgattgttcaaatatcatttctcta 19442504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 32915082 - 32915144
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| ||||||  ||||||||||||||||||||    
T  32915082 agtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctct 32915144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 43367899 - 43367977
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctatc 101  Q
    |||||||||||  ||||||||| | |||||| | ||||||||| |||||||||  |||  ||||| |||||||||||||    
T  43367899 aaaacataatgtgagtatgagaaagaaaattctcacaaaagttgtcacaaaatggttgaacaaatgtcatttctctatc 43367977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 48983678 - 48983740
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  48983678 agtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctct 48983740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 49020401 - 49020475
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| |||||||||| ||||||||| | | |||||  |||| |||||||||||||||    
T  49020401 aaaatataatgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctc 49020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 33024568 - 33024645
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||| ||||||  ||||||||| | ||| ||||  |||||||| |||| |||||  ||||||||||||||||||||||    
T  33024568 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctat 33024645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 33054085 - 33054158
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    |||| ||||||  ||||||||| | ||| ||||| |||||||| |||||||||   ||||||||||||||||||    
T  33054085 aaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatgaatgttcaaatatcatttct 33054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 44789169 - 44789214
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||||||| |||||||||   |||||||||||||||||||    
T  44789169 ttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctc 44789214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 47642617 - 47642678
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||  ||||||||||||||||||||    
T  47642617 agtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 47642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 1852948 - 1853024
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||| ||||||  ||||||||| | ||| ||||  |||||||| |||| |||||  |||||||||||||||||||||    
T  1852948 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctcta 1853024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 7171246 - 7171310
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | ||| |||| ||||||||| |||  |||||  ||||||||||||||||||||||    
T  7171246 agtatgagagataaagttgtcacaaaagttgtcattaaatagatgttcaaatatcatttctctat 7171310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 21433393 - 21433473
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| |||||||||||  ||||| ||| | ||| |||| ||||||||| | |||||||  |||| ||||||||||||||||    
T  21433393 aaataaaaacataatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctct 21433473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 32873401 - 32873338
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||||||||||||| |||||| |||||||| ||| |||||   ||| ||||||||||||||||||    
T  32873401 agtatgagataaaagattgta-caaaagttatcataaaatggatgtacaaatatcatttctctat 32873338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 38821440 - 38821365
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| ||||  ||||||||| | |||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  38821440 aaaacacaatgtgagtatgagaaagaaaattgtcacaaaagttgtcataaaatggttgttcaaatatcatttctct 38821365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 9052002 - 9051933
Alignment:
Q  24 aaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcattt 94  Q
    ||||||||||||| ||||| | |||||||||| ||||||||| ||| |||||| |||| ||||||||||||    
T  9052002 aaacataatgcaaatatgaaagaaaaaattgtcacaaaagttgtca-aaaataattgtacaaatatcattt 9051933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 37077863 - 37077785
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctatc 101  Q
    |||||||||||  ||||||| | | |||||||| |||||| || ||| |||||| ||||||||||||||||| ||||||    
T  37077863 aaaacataatgtgagtatgaaagataaaattgttacaaaaattatcaaaaaatagttgttcaaatatcatttttctatc 37077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 26481100 - 26481164
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | |||||||| ||||||||| | | |||||| ||||||||||||||||| |||||    
T  26481100 agtatgagaaagaaaattgtcacaaaagttgttaaaaaataattgttcaaatatcatttttctat 26481164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 35589397 - 35589461
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    ||||||||| | ||||||||  |||||||| |||||||||   ||||||||||||||||||||||    
T  35589397 agtatgagagagaaaattgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctctat 35589461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 39449143 - 39449191
Alignment:
Q  52 ttgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||||||||||||| |||||||||   ||||||||||||||||||||||    
T  39449143 ttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctctat 39449191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 2841908 - 2841833
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||||  ||||||||| | ||| |||||||||||||| |||||||||   || |||||||||||||||||    
T  2841908 aaaaaataatgtgagtatgagaaagaaagttgtaacaaaagttgtcacaaaatggatgatcaaatatcatttctct 2841833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 36383522 - 36383460
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||||| | ||| ||||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  36383522 agtatgagagagaaagttgta-caaaagttgtcacaaaatctttgtacaaatatcatttctcta 36383460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 36802970 - 36802895
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||||  ||||||||| | ||| ||||| |||||||| |||||||||   ||||||||||||||||||||    
T  36802970 aaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatggatgttcaaatatcatttctct 36802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 44254673 - 44254598
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||| ||||| | ||||||||| | ||| |||||||||||||| ||||| |||   ||||||||||||||||||||    
T  44254673 aaaaaataatacgagtatgagagagaaagttgtaacaaaagttgtcacagaatgaatgttcaaatatcatttctct 44254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 14877018 - 14876956
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    ||||||||| | ||| |||| ||||||||| ||| |||||| ||||||| |||||||||||||    
T  14877018 agtatgagagagaaagttgtcacaaaagttgtcaaaaaatagttgttcacatatcatttctct 14876956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 17569703 - 17569777
Alignment:
Q  25 aacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatat-ttgttcaaatatcatttctct 98  Q
    |||||||||  ||||||||| |||| ||||| ||||||||| ||| ||||  | |||||||||||||||||||||    
T  17569703 aacataatgtgagtatgagagaaaatattgttacaaaagttatcaaaaaaattattgttcaaatatcatttctct 17569777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 18723668 - 18723594
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| | ||| ||||||||||| || |||||||||   |||||||||||||||||||    
T  18723668 aaaaaataatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcatttctc 18723594  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 28244443 - 28244505
Alignment:
Q  37 gtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||| | ||| ||||| |||||||| ||||||||||  ||||||||| |||||||||||    
T  28244443 gtatgagaaagaaagttgtagcaaaagttatcacaaaatagatgttcaaatttcatttctcta 28244505  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 28245802 - 28245728
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||| ||||||  ||||||||| | ||| |||| ||||||||| || |||||||  |||||||||||||||||||    
T  28245802 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctc 28245728  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 44530674 - 44530752
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttct 96  Q
    |||||| ||||| ||  |||||||| | | |||||||| | ||||||| ||| |||||| |||||||||||||||||||    
T  44530674 aaatgagaacatgatataagtatgaaaaagaaaattgtcataaaagttatcataaaataattgttcaaatatcatttct 44530752  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 3091801 - 3091741
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| | |||||||| | ||||||| |||||||||| |||| |||||||||||||||    
T  3091801 agtatgagagagaaaattgtca-aaaagttatcacaaaatagttgtacaaatatcatttctc 3091741  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 8427621 - 8427552
Alignment:
Q  28 ataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    |||||| |||||||||| | ||| |||| |||||| || ||| ||||||  |||||||||||||||||||    
T  8427621 ataatgtaagtatgagagagaaagttgtcacaaaaattgtcaaaaaatagatgttcaaatatcatttctc 8427552  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 18177014 - 18176937
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||| ||||||  ||||||||| | ||| ||||  |||||||| |||| |||||  ||||||||||||||||||||||    
T  18177014 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctat 18176937  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 18510714 - 18510673
Alignment:
Q  58 caaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  18510714 caaaagttgtcaaaaaatagttgttcaaatatcatttctcta 18510673  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 19642673 - 19642596
Alignment:
Q  21 tgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctc-acaaaatatttgttcaaatatcatttctc 97  Q
    |||||||||||||  ||||| ||||||||| |||| ||||||||| || | |||||| ||||||| || |||||||||    
T  19642673 tgaaaacataatgtgagtataagataaaaatttgtcacaaaagttgtcaaaaaaataattgttcacatgtcatttctc 19642596  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 37731211 - 37731272
Alignment:
Q  37 gtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||| | |||||||| ||||||||| ||| ||| |  |||||||||||||||||||||    
T  37731211 gtatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctct 37731272  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 40358107 - 40358184
Alignment:
Q  21 tgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| |||||  |||||||||| |||||||||| |||||| || | | |||||| ||||  |||||||||||||||    
T  40358107 tgaaaatataatataagtatgagagaaaaaattgtcacaaaaattattaaaaaatagttgtagaaatatcatttctct 40358184  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 41042327 - 41042251
Alignment:
Q  23 aaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctctat 100  Q
    |||| ||||||  ||||||||| ||||| |||| ||||||||| | | |||||  |||||||||||||||||||||||    
T  41042327 aaaagataatgtgagtatgagagaaaaagttgtcacaaaagttgtta-aaaatggttgttcaaatatcatttctctat 41042251  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 44287451 - 44287511
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||||| |||||||| | ||||||||| | | |||||| ||||||||||||||||||||    
T  44287451 agtatgagagaaaaaattatcacaaaagttgtaa-aaaatagttgttcaaatatcatttctc 44287511  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 9194508 - 9194432
Alignment:
Q  18 aaatgaaaacataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcattt 94  Q
    ||||||||| ||||||  ||||||||| | ||| |||| | ||||||| |||||||||   ||||||||||||||||    
T  9194508 aaatgaaaatataatgtgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcattt 9194432  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 31296587 - 31296535
Alignment:
Q  46 aaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||||||| ||||||||| || |||||||  ||| ||||||||||||||||    
T  31296587 aaaaaattgtgacaaaagttgtcgcaaaataactgtacaaatatcatttctct 31296535  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 18072 - 18003
Alignment:
Q  28 ataatgcaagtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctct 98  Q
    |||||| |||||||||| | |||||||| ||||| ||| ||| |||||| |||| ||||||||||||||||    
T  18072 ataatgtaagtatgagagagaaaattgtcacaaa-gttgtcaaaaaataattgtccaaatatcatttctct 18003  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 223489 - 223550
Alignment:
Q  36 agtatgagataaaaaattgtaacaaaagttctcacaaaatatttgttcaaatatcatttctc 97  Q
    ||||||| ||| ||| |||||||||||||| |||||||||   | |||||||||||||||||    
T  223489 agtatgaaatagaaagttgtaacaaaagttgtcacaaaatggatattcaaatatcatttctc 223550  T

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Target: scaffold0662 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 1116 - 1076
Alignment:
Q  59 aaaagttctcacaaaatatttgttcaaatatcatttctcta 99  Q
    ||||||| |||||||||| |||| |||||||||||||||||    
T  1116 aaaagttgtcacaaaatagttgtacaaatatcatttctcta 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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