View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_low_39 (Length: 260)
Name: NF4586_low_39
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_low_39 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 245
Target Start/End: Complemental strand, 9905735 - 9905494
Alignment:
| Q |
4 |
acaaagatattacctacaaacctaaattccaggtaaaatccgaatgaaacgtgtttcctaaggaaaattcattaatttcggaagaaaaatcgagagtttc |
103 |
Q |
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| T |
9905735 |
acaaaggtattatctaagaatctaaattcctggcaaaattcgaatgaaatgtgtttcctaaggaaaattcattaattttggaagaaaaatcgagagtttc |
9905636 |
T |
|
| Q |
104 |
tagtagtgaaatctcggagataaaaaatagcatcgttatgaaaaaatgaaggatattaactcataccaatttcatatcaactcaaattctctggtctatt |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
9905635 |
tagtagtgaaatctcggagataaaaaatagcatcgttatgaaaaaatgaagaatattaactcataccaatttcatatcaactcaaattctttggtctatt |
9905536 |
T |
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| Q |
204 |
ctcaatgcaaaaagaaaggatttcaattcatactttcatttc |
245 |
Q |
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| T |
9905535 |
ctcaatgcaaaaagaaatgatttcaattcatacttttatttc |
9905494 |
T |
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