View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4586_low_7 (Length: 511)

Name: NF4586_low_7
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4586_low_7
NF4586_low_7
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-181)||(224570-224738)
[»] chr8 (40 HSPs)
chr8 (13-181)||(31982211-31982379)
chr8 (411-488)||(38442431-38442509)
chr8 (411-489)||(35065510-35065589)
chr8 (411-489)||(35731464-35731543)
chr8 (411-488)||(4718186-4718264)
chr8 (255-301)||(33970647-33970693)
chr8 (411-488)||(290570-290646)
chr8 (411-489)||(8073568-8073648)
chr8 (255-296)||(4018177-4018218)
chr8 (413-449)||(12955309-12955345)
chr8 (418-489)||(37438505-37438577)
chr8 (255-290)||(4038150-4038185)
chr8 (255-290)||(4038574-4038609)
chr8 (257-296)||(7080131-7080170)
chr8 (412-490)||(36683323-36683402)
chr8 (411-449)||(4017710-4017748)
chr8 (411-449)||(4018189-4018227)
chr8 (411-449)||(4038156-4038194)
chr8 (411-449)||(4038580-4038618)
chr8 (411-488)||(28237286-28237364)
chr8 (407-449)||(38075179-38075221)
chr8 (408-449)||(8082713-8082754)
chr8 (255-296)||(10167700-10167741)
chr8 (408-449)||(10579069-10579110)
chr8 (408-449)||(11140857-11140898)
chr8 (255-292)||(15890113-15890150)
chr8 (255-288)||(28743397-28743430)
chr8 (255-296)||(32723748-32723789)
chr8 (408-449)||(42217352-42217393)
chr8 (255-288)||(43641624-43641657)
chr8 (408-449)||(45421273-45421314)
chr8 (256-288)||(290566-290598)
chr8 (458-486)||(1087251-1087279)
chr8 (411-486)||(2376260-2376336)
chr8 (255-291)||(7995816-7995852)
chr8 (413-449)||(27576339-27576375)
chr8 (255-287)||(34213681-34213713)
chr8 (409-449)||(41258935-41258975)
chr8 (413-449)||(44904677-44904713)
chr8 (413-449)||(44947815-44947851)
[»] chr4 (51 HSPs)
chr4 (13-208)||(22092290-22092485)
chr4 (13-181)||(7393948-7394115)
chr4 (13-156)||(7392495-7392638)
chr4 (411-490)||(6840993-6841072)
chr4 (411-488)||(56467869-56467947)
chr4 (411-488)||(44801761-44801839)
chr4 (411-488)||(48148763-48148841)
chr4 (409-488)||(23112905-23112985)
chr4 (411-449)||(23719338-23719376)
chr4 (394-490)||(23113094-23113191)
chr4 (408-488)||(26629243-26629324)
chr4 (411-487)||(36157251-36157328)
chr4 (413-490)||(8459341-8459419)
chr4 (411-486)||(25298425-25298501)
chr4 (410-489)||(34321012-34321092)
chr4 (411-490)||(54682918-54682998)
chr4 (411-450)||(44723820-44723859)
chr4 (411-449)||(5368742-5368780)
chr4 (411-449)||(6452208-6452246)
chr4 (411-449)||(7603866-7603904)
chr4 (411-488)||(8459551-8459629)
chr4 (411-449)||(10062558-10062596)
chr4 (411-449)||(16069723-16069761)
chr4 (411-488)||(22638037-22638115)
chr4 (411-488)||(26629432-26629510)
chr4 (411-449)||(40603408-40603446)
chr4 (411-449)||(44258907-44258945)
chr4 (411-449)||(53849888-53849926)
chr4 (414-490)||(2255900-2255977)
chr4 (408-449)||(2602540-2602581)
chr4 (255-296)||(3060395-3060436)
chr4 (255-292)||(3060546-3060583)
chr4 (255-288)||(7603875-7603908)
chr4 (411-487)||(15639004-15639081)
chr4 (255-296)||(15639052-15639093)
chr4 (255-288)||(22638241-22638274)
chr4 (255-296)||(23257005-23257046)
chr4 (408-488)||(23458462-23458543)
chr4 (255-296)||(27704699-27704740)
chr4 (257-310)||(32319546-32319599)
chr4 (255-292)||(35023392-35023429)
chr4 (408-449)||(43700443-43700484)
chr4 (413-489)||(44258697-44258774)
chr4 (412-449)||(47301045-47301082)
chr4 (255-288)||(53849897-53849930)
chr4 (437-484)||(22300513-22300561)
chr4 (412-487)||(32507961-32508037)
chr4 (405-449)||(35910800-35910844)
chr4 (411-490)||(36229952-36230032)
chr4 (411-486)||(37133424-37133500)
chr4 (409-445)||(53856235-53856271)
[»] chr6 (28 HSPs)
chr6 (13-181)||(12982746-12982914)
chr6 (15-181)||(32110560-32110719)
chr6 (411-486)||(7466475-7466551)
chr6 (411-449)||(12729391-12729429)
chr6 (411-490)||(27771884-27771964)
chr6 (407-449)||(31842629-31842671)
chr6 (255-296)||(6153793-6153834)
chr6 (260-296)||(10117927-10117963)
chr6 (413-488)||(34556569-34556645)
chr6 (257-296)||(5385476-5385515)
chr6 (255-294)||(7466378-7466417)
chr6 (406-449)||(13060041-13060084)
chr6 (411-489)||(30579482-30579561)
chr6 (411-449)||(7466369-7466407)
chr6 (411-449)||(15837436-15837474)
chr6 (411-449)||(17205196-17205234)
chr6 (411-449)||(18030853-18030891)
chr6 (411-449)||(22787238-22787276)
chr6 (411-488)||(29681599-29681677)
chr6 (411-488)||(31842456-31842534)
chr6 (255-296)||(1131017-1131058)
chr6 (411-487)||(6366648-6366725)
chr6 (255-296)||(7621142-7621183)
chr6 (255-288)||(14656397-14656430)
chr6 (255-296)||(29681648-29681689)
chr6 (255-292)||(32647178-32647215)
chr6 (264-316)||(9380894-9380946)
chr6 (409-449)||(11784645-11784685)
[»] chr1 (38 HSPs)
chr1 (13-181)||(22455808-22455976)
chr1 (411-485)||(7065005-7065080)
chr1 (260-315)||(10542799-10542854)
chr1 (411-490)||(12857608-12857688)
chr1 (408-487)||(21390931-21391010)
chr1 (406-449)||(18397410-18397453)
chr1 (411-449)||(46136652-46136690)
chr1 (411-449)||(51549652-51549690)
chr1 (408-449)||(26507425-26507466)
chr1 (411-487)||(45967405-45967482)
chr1 (408-448)||(20209618-20209658)
chr1 (411-490)||(21068663-21068743)
chr1 (411-487)||(46595665-46595741)
chr1 (409-444)||(35941412-35941447)
chr1 (411-489)||(43684697-43684776)
chr1 (261-349)||(43741175-43741263)
chr1 (411-449)||(14091023-14091061)
chr1 (411-449)||(28215797-28215835)
chr1 (412-489)||(40305123-40305201)
chr1 (411-449)||(43684875-43684913)
chr1 (411-488)||(46510469-46510547)
chr1 (411-449)||(49804324-49804362)
chr1 (411-449)||(51053552-51053590)
chr1 (411-449)||(51194833-51194871)
chr1 (408-449)||(6330670-6330711)
chr1 (408-488)||(21091586-21091667)
chr1 (255-296)||(23175838-23175879)
chr1 (412-449)||(30925471-30925508)
chr1 (255-292)||(34340770-34340807)
chr1 (255-288)||(43684747-43684780)
chr1 (255-288)||(43684871-43684904)
chr1 (255-296)||(49804197-49804238)
chr1 (413-449)||(512627-512663)
chr1 (411-486)||(2118576-2118652)
chr1 (409-449)||(6763985-6764025)
chr1 (255-287)||(14091032-14091064)
chr1 (409-449)||(33566830-33566870)
chr1 (422-489)||(43342836-43342904)
[»] chr7 (42 HSPs)
chr7 (13-123)||(13906947-13907057)
chr7 (411-488)||(43072863-43072941)
chr7 (411-490)||(25513567-25513647)
chr7 (411-489)||(27689318-27689397)
chr7 (411-489)||(41506522-41506601)
chr7 (411-449)||(8898269-8898307)
chr7 (427-488)||(30085527-30085589)
chr7 (411-488)||(40081867-40081945)
chr7 (411-449)||(43073071-43073109)
chr7 (411-486)||(23066594-23066670)
chr7 (413-449)||(45803250-45803286)
chr7 (411-489)||(12847630-12847709)
chr7 (406-449)||(19532622-19532665)
chr7 (255-294)||(23066436-23066475)
chr7 (411-489)||(24838271-24838350)
chr7 (411-449)||(22745083-22745121)
chr7 (406-487)||(22745247-22745329)
chr7 (411-488)||(33258483-33258561)
chr7 (411-449)||(36808441-36808479)
chr7 (411-449)||(37105015-37105053)
chr7 (411-449)||(39012477-39012515)
chr7 (411-488)||(41492332-41492410)
chr7 (411-449)||(43977614-43977652)
chr7 (411-449)||(44157969-44158007)
chr7 (411-449)||(44719567-44719605)
chr7 (255-292)||(19532619-19532656)
chr7 (255-288)||(22745092-22745125)
chr7 (255-296)||(23066582-23066623)
chr7 (411-487)||(24838064-24838141)
chr7 (255-288)||(24838267-24838300)
chr7 (257-294)||(30085382-30085419)
chr7 (408-488)||(37105177-37105258)
chr7 (408-449)||(37143144-37143185)
chr7 (408-449)||(37331271-37331312)
chr7 (255-288)||(39012486-39012519)
chr7 (408-449)||(39535105-39535146)
chr7 (256-301)||(40659631-40659676)
chr7 (255-288)||(40934490-40934523)
chr7 (411-487)||(48549709-48549786)
chr7 (255-296)||(48648070-48648111)
chr7 (411-486)||(40934443-40934519)
chr7 (255-287)||(41506519-41506551)
[»] chr2 (36 HSPs)
chr2 (408-490)||(25903593-25903676)
chr2 (411-488)||(25900771-25900849)
chr2 (411-488)||(41432555-41432633)
chr2 (411-487)||(20556065-20556142)
chr2 (394-449)||(10300385-10300440)
chr2 (255-296)||(11723582-11723623)
chr2 (406-490)||(16970879-16970964)
chr2 (411-487)||(19029970-19030047)
chr2 (411-487)||(41738058-41738135)
chr2 (391-490)||(43927539-43927640)
chr2 (408-449)||(45194565-45194606)
chr2 (422-485)||(5584268-5584332)
chr2 (255-294)||(8846926-8846965)
chr2 (407-449)||(725722-725764)
chr2 (411-449)||(2112437-2112475)
chr2 (411-488)||(6334106-6334184)
chr2 (411-449)||(8846936-8846974)
chr2 (411-449)||(10300552-10300590)
chr2 (411-449)||(11723594-11723632)
chr2 (411-449)||(16971090-16971128)
chr2 (411-449)||(21099741-21099779)
chr2 (411-449)||(22304008-22304046)
chr2 (411-449)||(31765017-31765055)
chr2 (411-449)||(35428876-35428914)
chr2 (255-296)||(8778301-8778342)
chr2 (409-489)||(13500044-13500125)
chr2 (255-292)||(16707184-16707221)
chr2 (255-292)||(16971082-16971119)
chr2 (420-449)||(17420439-17420468)
chr2 (255-296)||(18677106-18677147)
chr2 (255-292)||(19030138-19030175)
chr2 (255-292)||(22039244-22039281)
chr2 (255-296)||(45194574-45194615)
chr2 (255-287)||(2112446-2112478)
chr2 (411-490)||(12262732-12262812)
chr2 (411-490)||(29950570-29950650)
[»] scaffold0076 (1 HSPs)
scaffold0076 (411-488)||(16295-16373)
[»] chr3 (37 HSPs)
chr3 (411-488)||(31798074-31798152)
chr3 (411-484)||(53163243-53163317)
chr3 (255-306)||(4525187-4525238)
chr3 (411-485)||(46175584-46175659)
chr3 (411-449)||(11691793-11691831)
chr3 (264-310)||(17561311-17561357)
chr3 (411-449)||(35546343-35546381)
chr3 (411-449)||(36710852-36710890)
chr3 (407-484)||(41752493-41752571)
chr3 (411-449)||(44035629-44035667)
chr3 (411-488)||(45953913-45953991)
chr3 (255-296)||(45953962-45954003)
chr3 (412-444)||(30061568-30061600)
chr3 (411-490)||(45394160-45394239)
chr3 (408-487)||(48128678-48128758)
chr3 (411-489)||(28540945-28541024)
chr3 (411-487)||(43563538-43563615)
chr3 (411-449)||(4183167-4183205)
chr3 (411-449)||(11899750-11899788)
chr3 (411-484)||(16852531-16852605)
chr3 (411-449)||(20221890-20221928)
chr3 (419-488)||(24682164-24682234)
chr3 (407-484)||(26977251-26977329)
chr3 (411-449)||(36772759-36772797)
chr3 (411-449)||(40126714-40126752)
chr3 (411-449)||(40593649-40593687)
chr3 (255-297)||(40593658-40593700)
chr3 (411-449)||(42489818-42489856)
chr3 (411-449)||(45954122-45954160)
chr3 (411-449)||(49029480-49029518)
chr3 (255-296)||(11935823-11935864)
chr3 (255-296)||(16852519-16852560)
chr3 (411-490)||(17561460-17561538)
chr3 (257-290)||(25703911-25703944)
chr3 (410-490)||(26411896-26411976)
chr3 (408-449)||(40593814-40593855)
chr3 (255-288)||(45954118-45954151)
[»] chr5 (33 HSPs)
chr5 (413-489)||(38566650-38566727)
chr5 (411-490)||(30004595-30004674)
chr5 (411-489)||(20224906-20224985)
chr5 (411-449)||(6656616-6656654)
chr5 (411-449)||(28770780-28770818)
chr5 (411-449)||(30187761-30187799)
chr5 (407-449)||(33620055-33620097)
chr5 (411-489)||(34578299-34578377)
chr5 (408-487)||(6042302-6042382)
chr5 (411-485)||(10737819-10737894)
chr5 (411-449)||(5118449-5118487)
chr5 (411-449)||(6042746-6042784)
chr5 (411-449)||(10862388-10862426)
chr5 (411-449)||(14347078-14347116)
chr5 (411-449)||(18279046-18279084)
chr5 (411-449)||(19617949-19617987)
chr5 (411-449)||(30239438-30239476)
chr5 (411-449)||(31163332-31163370)
chr5 (411-449)||(33619891-33619929)
chr5 (411-449)||(39986008-39986046)
chr5 (408-449)||(857487-857528)
chr5 (406-490)||(2824245-2824330)
chr5 (255-292)||(3463499-3463536)
chr5 (255-288)||(6042742-6042775)
chr5 (259-296)||(7201066-7201103)
chr5 (255-296)||(14311324-14311365)
chr5 (255-292)||(18279369-18279406)
chr5 (255-292)||(20697635-20697672)
chr5 (255-288)||(33619900-33619933)
chr5 (255-292)||(42396847-42396884)
chr5 (411-490)||(6563163-6563243)
chr5 (412-488)||(25247330-25247405)
chr5 (412-488)||(25311114-25311189)
[»] scaffold0483 (1 HSPs)
scaffold0483 (405-488)||(9460-9544)
[»] scaffold0040 (1 HSPs)
scaffold0040 (255-310)||(48845-48900)
[»] scaffold0233 (2 HSPs)
scaffold0233 (411-449)||(18625-18663)
scaffold0233 (408-449)||(18457-18498)
[»] scaffold0223 (1 HSPs)
scaffold0223 (411-490)||(28314-28394)
[»] scaffold0018 (1 HSPs)
scaffold0018 (408-487)||(146341-146421)
[»] scaffold0045 (2 HSPs)
scaffold0045 (255-294)||(22169-22208)
scaffold0045 (411-449)||(22179-22217)
[»] scaffold0003 (1 HSPs)
scaffold0003 (411-449)||(352641-352679)
[»] scaffold0009 (1 HSPs)
scaffold0009 (255-296)||(262829-262870)
[»] scaffold0283 (1 HSPs)
scaffold0283 (413-449)||(3794-3830)


Alignment Details
Target: scaffold0014 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 224570 - 224738
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    ||||||||||||||||| | || |||||||||||||| |||||||| |||||||| | ||||||||||||||| |||||||||||| |||||||||||||    
T  224570 tgagatgaagcgacatgccctcttggtgcaagctgaacatttgaaaaataaaagtagaaacatagaagaaaagccacgggtgaggcgtgtcgatttgtac 224669  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttct 181  Q
     ||| |||||||||||||||| ||| ||| |||||||||||||| || |||||| ||||| ||||||||    
T  224670 cttaaaatggagactcaatcagtggggatgaaagaaaacattcatttgcaagaaaagacttattcttct 224738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 31982211 - 31982379
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    ||||||||||||||||| | || |||||||||||||| |||||||| |||||||| | ||||||||||||||| |||||||||||| |||||||||||||    
T  31982211 tgagatgaagcgacatgccctcttggtgcaagctgaacatttgaaaaataaaagtagaaacatagaagaaaagccacgggtgaggcgtgtcgatttgtac 31982310  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttct 181  Q
     ||| |||||||||||||||| ||| ||| |||||||||||||| || |||||| ||||| ||||||||    
T  31982311 cttaaaatggagactcaatcagtggggatgaaagaaaacattcatttgcaagaaaagacttattcttct 31982379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 38442509 - 38442431
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| ||||||||||||| | || || |||||||||||| ||||||||||||||||||    
T  38442509 taaaaagtgtgattttattttgtagggactaaaaacaaaattatgaatatttataaggaccatttacttaattaaccct 38442431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 35065589 - 35065510
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| |||||||||||||| ||| ||||||||||||| |  | || ||||||| ||||||||||||||||||||||||    
T  35065589 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggactatttacttaattaaccctt 35065510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 35731464 - 35731543
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    ||||||||||||||||||||| |||  ||||||||| |||| || |||||||||| |||| ||||||||||||| |||||    
T  35731464 taaaaaatgtgattttattttgtaggaactaaaaacaaaattatgaacatttatagggaccatttacttaattacccctt 35731543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 4718186 - 4718264
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| |||||||||| |||| || || ||||||| |||| ||||||||||||||||||    
T  4718186 taaaaagtgtgattttattttgtagggactaaaaacaaaattatgaatatttatagggaccatttacttaattaaccct 4718264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 33970647 - 33970693
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaaaattt 301  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  33970647 agtccttataaaataaaatcgcactttttagtccttgtaaaaaattt 33970693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 290570 - 290646
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||||||| ||| ||||| |||| || || ||||||| |||| ||||||||||||||||||    
T  290570 taaaaagtgtgattttattttatagggacaaaaaa-aaattatgaatatttatagggaccatttacttaattaaccct 290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 8073648 - 8073568
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac--aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| |||||||||||||| ||| ||||||||||  ||||  | || ||||||| ||||||||||||||||||||||||    
T  8073648 taaaaagtgtgattttattttgtagggactaaaaaccaaaattctgaatatttatagggactatttacttaattaaccctt 8073568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 4018218 - 4018177
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  4018218 agtccctataaaataaaatcacactttttagtccttataaaa 4018177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 12955309 - 12955345
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12955309 aaaaatgttattttattttatagagactaaaaacaaa 12955345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 489
Target Start/End: Complemental strand, 37438577 - 37438505
Alignment:
Q  418 tgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||||||||||||||| || |||||||||| |  | || |||||||||||| |||||| ||||||||||||    
T  37438577 tgtgattttattttatagtgattaaaaacaaaattctaaatatttataaggaccatttacataattaaccctt 37438505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 4038185 - 4038150
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcctt 290  Q
    |||||||||||||||||||| |||||||||||||||    
T  4038185 agtccctataaaataaaatcacactttttagtcctt 4038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 4038609 - 4038574
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcctt 290  Q
    |||||||||||||||||||| |||||||||||||||    
T  4038609 agtccctataaaataaaatcacactttttagtcctt 4038574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 7080131 - 7080170
Alignment:
Q  257 tccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  7080131 tccctataaaataaaatcacactttttagtccttataaaa 7080170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 36683323 - 36683402
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaacaaatgatt-aacatttataaggactatttacttaattaaccctta 490  Q
    |||||||||||||||||||| ||| |||||||||||||   || || ||||||| ||||||   ||||||||||||||||    
T  36683323 aaaaaatgtgattttattttgtagggactaaaaacaaaactttgaatatttatagggactaaaaacttaattaaccctta 36683402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 4017710 - 4017748
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  4017710 taaaaaatgtgattttattttgtagggactaaaaacaaa 4017748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 4018189 - 4018227
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  4018189 taaaaagtgtgattttattttatagggactaaaaacaaa 4018227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 4038156 - 4038194
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  4038156 taaaaagtgtgattttattttatagggactaaaaacaaa 4038194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 4038580 - 4038618
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  4038580 taaaaagtgtgattttattttatagggactaaaaacaaa 4038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 28237364 - 28237286
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| |||||||||| ||||  | || ||||||| |||  ||||||||||||||||||    
T  28237364 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggatcatttacttaattaaccct 28237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 38075179 - 38075221
Alignment:
Q  407 agattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||| |||||||||||||| ||| |||||||||||||    
T  38075179 agattaaaaagtgtgattttattttgtagggactaaaaacaaa 38075221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 8082713 - 8082754
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  8082713 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 8082754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 10167741 - 10167700
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  10167741 agtccctaaaaaataaaatcacactttttagtccttataaaa 10167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 10579110 - 10579069
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  10579110 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 10579069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 11140857 - 11140898
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  11140857 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 11140898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 15890113 - 15890150
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  15890113 agtccctaaaaaataaaatcacactttttagtccttgt 15890150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 28743430 - 28743397
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||| |||||||||||||||||||||||||    
T  28743430 agtccctacaaaataaaatctcactttttagtcc 28743397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 32723748 - 32723789
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  32723748 agtccctacaaaataaaatcacactttttagtccttataaaa 32723789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 42217352 - 42217393
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| | |||||||||||| |||||||||||||||||    
T  42217352 gattaaaaagtatgattttattttgtagagactaaaaacaaa 42217393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 43641624 - 43641657
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  43641624 agtccctataaaataaaatcacactttttagtcc 43641657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 45421314 - 45421273
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||  |||||||| |||||||||||||    
T  45421314 gattaaaaaatgtgatttatttttatagggactaaaaacaaa 45421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 290598 - 290566
Alignment:
Q  256 gtccctataaaataaaatctcactttttagtcc 288  Q
    ||||||||||||||||||| |||||||||||||    
T  290598 gtccctataaaataaaatcacactttttagtcc 290566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 486
Target Start/End: Original strand, 1087251 - 1087279
Alignment:
Q  458 atttataaggactatttacttaattaacc 486  Q
    |||||||||||||||||||||||||||||    
T  1087251 atttataaggactatttacttaattaacc 1087279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 486
Target Start/End: Complemental strand, 2376336 - 2376260
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaacc 486  Q
    |||||| |||||||||||||| || | ||||||||| ||||  | || |||||||||||| |||||||| |||||||    
T  2376336 taaaaagtgtgattttattttgtataaactaaaaacaaaattttgaatatttataaggaccatttactttattaacc 2376260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 7995852 - 7995816
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttg 291  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  7995852 agtccctacaaaataaaatcacactttttagtccttg 7995816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 27576339 - 27576375
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||||  ||||||||||||||||||||||    
T  27576339 aaaaatgtgatttgtttttatagagactaaaaacaaa 27576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 34213681 - 34213713
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtc 287  Q
    |||||||| ||||||||||||||||||||||||    
T  34213681 agtccctacaaaataaaatctcactttttagtc 34213713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 449
Target Start/End: Original strand, 41258935 - 41258975
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||| |||||||||||||| ||| |||||||||||||    
T  41258935 attaaaaagtgtgattttattttgtagggactaaaaacaaa 41258975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 44904713 - 44904677
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  44904713 aaaaatgtgattttattttgtagggactaaaaacaaa 44904677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 44947815 - 44947851
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  44947815 aaaaatgtgattttattttgtagggactaaaaacaaa 44947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 22092485 - 22092290
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    |||||||||  |||||| ||||||||| ||||| ||| |||||||| |||||||| ||||| ||||||||||| ||| ||||||    |||||| |||||    
T  22092485 tgagatgaaatgacatgccatcatggtccaagcagaaaatttgaaaaataaaagtagcaacgtagaagaaaagccaccggtgagatgcgtcgatctgtac 22092386  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttctctaaagtgtgcggtcacaatttcaaga 208  Q
     |||||||||||||||||||||||  ||| |||||||||||||| || |||||||||||||| |||||||||| ||| | ||||||||||||||||    
T  22092385 cttacaatggagactcaatcaatgaggatgaaagaaaacattcatttgcaagaagagactcaatcttctctaaggtgggaggtcacaatttcaaga 22092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 7394115 - 7393948
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    ||||||||||||||||| | || || ||||||||||| |||||||| |||||||| ||| ||||||||||||| ||| |||||||| | |||||||||||    
T  7394115 tgagatgaagcgacatgccctcttg-tgcaagctgaacatttgaaaaataaaagtagcagcatagaagaaaagccacaggtgaggcgtatcgatttgtac 7394017  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttct 181  Q
      || ||||||||||| |||||||| ||| |||||||||||||| || |||||| ||||||||||||||    
T  7394016 cgtaaaatggagactcgatcaatggggatgaaagaaaacattcatttgcaagaaaagactcattcttct 7393948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 7392638 - 7392495
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    ||||||||||||||||| | || |||||||||||||| |||||||| |||||||| ||| ||||||||||||| ||| |||||||| | |||||||||||    
T  7392638 tgagatgaagcgacatgccctcttggtgcaagctgaacatttgaaaaataaaagtagcagcatagaagaaaagccacaggtgaggcgtatcgatttgtac 7392539  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattca 156  Q
      || |||||||||||||||||||| ||  ||||||||||||||    
T  7392538 cgtaaaatggagactcaatcaatggggaggaaagaaaacattca 7392495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 6840993 - 6841072
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||||||||||||||||| ||| ||||||||| ||||  | || |||||||||||  ||||||||||||||||||||    
T  6840993 taaaaaatgtgattttattttgtagggactaaaaaaaaattctaaatatttataaggaacatttacttaattaaccctta 6841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 56467947 - 56467869
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| ||||||||||||| |||| ||||||||||||| | || || ||||||| |||||||||||||||||||||||    
T  56467947 taaaaagtgtgattttatttgatagggactaaaaacaaaattatgaatatttatagggactatttacttaattaaccct 56467869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 44801839 - 44801761
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||||| |||||||||||| ||| ||||||||||||| |  | || |||||||||||| ||||||||||||||||||    
T  44801839 taaaaaatatgattttattttgtagggactaaaaacaaaattctgaatatttataaggacaatttacttaattaaccct 44801761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 48148841 - 48148763
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| |||||||||| |||| || || ||||||| |||| ||||||||||||||||||    
T  48148841 taaaaactgtgattttattttgtagggactaaaaacaaaattatgaatatttatagggacaatttacttaattaaccct 48148763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 23112985 - 23112905
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||||| |||||||||||||||||| |||||||||  ||||  | || |||||||||||| ||||| ||||||||||||    
T  23112985 attaaaaagtgtgattttattttatagggactaaaaataaaattttgaatatttataaggaccatttatttaattaaccct 23112905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 23719338 - 23719376
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  23719338 taaaaaatgtgattttattttatagggactaaaaacaaa 23719376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 490
Target Start/End: Original strand, 23113094 - 23113191
Alignment:
Q  394 ggaaaatatttcaagattaaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||| || || || |||||| |||||||||| |||||| | | |||||||||| | || || |||||||||||| |||||||||||||| |||||    
T  23113094 ggaaaattttacaggactaaaaagtgtgattttaatttataaaaattaaaaacaaaattatgaatatttataaggaccatttacttaattaatcctta 23113191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 488
Target Start/End: Complemental strand, 26629324 - 26629243
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||| |||||||||||||| ||| |||||||||  ||||  | || ||||||| |||| ||||||||||||||||||    
T  26629324 gattaaaaagtgtgattttattttgtagggactaaaaatgaaattttgaatatttatagggaccatttacttaattaaccct 26629243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 36157328 - 36157251
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||||| |||||||||||| ||| |||||||||| ||||  | || ||||||| |||| |||||||||||||||||    
T  36157328 taaaaaatatgattttattttgtagggactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccc 36157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 490
Target Start/End: Complemental strand, 8459419 - 8459341
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa--tgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||||||||||||||| ||| |||||||||||||  || |||| ||||||| ||||||   ||||||||||||||||    
T  8459419 aaaaatgtgattttattttgtagggactaaaaacaaaactg-ttaatatttatagggactaaaaacttaattaaccctta 8459341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 25298425 - 25298501
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaacc 486  Q
    ||||||||||||||||||||| |||  | |||||||||| |  | || |||||||||||| ||||||||||||||||    
T  25298425 taaaaaatgtgattttattttgtaggaaataaaaacaaaattctaaatatttataaggaccatttacttaattaacc 25298501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 489
Target Start/End: Complemental strand, 34321092 - 34321012
Alignment:
Q  410 ttaaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    ||||||| |||||||||||||| ||| |||||||| |||| |  | || ||||||| |||| |||||||||||||||||||    
T  34321092 ttaaaaagtgtgattttattttgtagggactaaaagcaaaattctgaatatttatagggaccatttacttaattaaccctt 34321012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 54682998 - 54682918
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| ||| |||||||||||| | |||||||||| ||||  | || ||||||| |||| ||||||||||||||||||||    
T  54682998 taaaaagtgtaattttattttattgggactaaaaactaaattctgaatatttatagggacaatttacttaattaaccctta 54682918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 450
Target Start/End: Original strand, 44723820 - 44723859
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaat 450  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  44723820 taaaaaatgtgattttattttttagggactaaaaacaaat 44723859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 5368780 - 5368742
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  5368780 taaaaagtgtgattttattttgtagagactaaaaacaaa 5368742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 6452208 - 6452246
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  6452208 taaaaaatgtgattttattttgtagggactaaaaacaaa 6452246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 7603904 - 7603866
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  7603904 taaaaagtgtgattttattttatagggactaaaaacaaa 7603866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 8459551 - 8459629
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| || ||||||| ||||  | || ||||||| |||| ||||||||||||||||||    
T  8459551 taaaaagtgtgattttattttgtagggattaaaaacaaaattctgaatatttatagggaccatttacttaattaaccct 8459629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 10062596 - 10062558
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  10062596 taaaaaatgtgattttattttataaggactaaaaacaaa 10062558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 16069723 - 16069761
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  16069723 taaaaaatatgattttattttatagggactaaaaacaaa 16069761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 22638115 - 22638037
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| || |||||||||| |  | || ||||| |||||| ||||||||||||||||||    
T  22638115 taaaaagtgtgattttattttgtagggattaaaaacaaaattctgaatatttacaaggaccatttacttaattaaccct 22638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 26629510 - 26629432
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| |||||||||  ||||  | || ||||||| |||| ||||||||||||||||||    
T  26629510 taaaaagtgtgattttattttgtagggactaaaaatgaaattttgaatatttatagggaccatttacttaattaaccct 26629432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 40603446 - 40603408
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  40603446 taaaaaatgtgattttattttataaggactaaaaacaaa 40603408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 44258907 - 44258945
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  44258907 taaaaaatgtgattttattttgtagggactaaaaacaaa 44258945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 53849926 - 53849888
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  53849926 taaaaagtgtgattttattttatagggactaaaaacaaa 53849888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 490
Target Start/End: Original strand, 2255900 - 2255977
Alignment:
Q  414 aaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||||||||||||||||||| || | ||||| ||||  | || ||||| || ||| ||||||||||||||||||||    
T  2255900 aaaatgtgattttattttatagggatttaaaacaaaattttgaatatttaaaaagaccatttacttaattaaccctta 2255977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 2602540 - 2602581
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||| ||||||||||||| |||||||||||||    
T  2602540 gattaaaaagtgtggttttattttatagggactaaaaacaaa 2602581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 3060395 - 3060436
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  3060395 agtccctacaaaataaaatcacactttttagtccttataaaa 3060436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 3060583 - 3060546
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  3060583 agtccctaaaaaataaaatcacactttttagtccttgt 3060546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 7603875 - 7603908
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  7603875 agtccctataaaataaaatcacactttttagtcc 7603908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 15639081 - 15639004
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| |||||||||||||| ||| |||||||||| ||||  | || |||||||||||  |||| ||||||||||||    
T  15639081 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttataaggatcatttccttaattaaccc 15639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 15639052 - 15639093
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  15639052 agtccctacaaaataaaatcacactttttagtccttataaaa 15639093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 22638274 - 22638241
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  22638274 agtccctataaaataaaatcacactttttagtcc 22638241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 23257005 - 23257046
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  23257005 agtccctaaaaaataaaatcacactttttagtccttataaaa 23257046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 23458462 - 23458543
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| || |||||||||||||||||| ||| |||||| |||| || || ||||| |  ||| ||||||||||||||||||    
T  23458462 gattaataagtgtgattttattttatagggacgaaaaacaaaattatgaatatttacagagaccatttacttaattaaccct 23458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 27704740 - 27704699
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  27704740 agtccctaaaaaataaaatcacactttttagtccttataaaa 27704699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 32319546 - 32319599
Alignment:
Q  257 tccctataaaataaaatctcactttttagtccttgtaaaaaattttgtcagcat 310  Q
    |||||||||||||||||| ||||||||||||| | |||||  || |||||||||    
T  32319546 tccctataaaataaaatcacactttttagtccctataaaattttctgtcagcat 32319599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 35023392 - 35023429
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  35023392 agtccctacaaaataaaatcacactttttagtccttgt 35023429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 43700484 - 43700443
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||||||||||||||||| | || ||||||||||    
T  43700484 gattaaaaaatgtgattttattttatggggattaaaaacaaa 43700443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 489
Target Start/End: Complemental strand, 44258774 - 44258697
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||| |||||||||||||| ||| || |||||||||| |  | || ||||||| |||| |||||||||||||||||||    
T  44258774 aaaagtgtgattttattttgtagggattaaaaacaaaattctaaatatttatagggaccatttacttaattaaccctt 44258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Original strand, 47301045 - 47301082
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||||||||||||||  |||||||||||||    
T  47301045 aaaaaatgtgattttattttatacggactaaaaacaaa 47301082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 53849897 - 53849930
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  53849897 agtccctataaaataaaatcacactttttagtcc 53849930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 484
Target Start/End: Original strand, 22300513 - 22300561
Alignment:
Q  437 gactaaaaacaaatgatta-acatttataaggactatttacttaattaa 484  Q
    ||||||||||||||  ||| | |||||||||||||||||||||||||||    
T  22300513 gactaaaaacaaatttttagatatttataaggactatttacttaattaa 22300561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 487
Target Start/End: Complemental strand, 32508037 - 32507961
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    ||||| |||||||||||||| | |||||||||||| ||||  | || ||||||| |||  |||||||||||||||||    
T  32508037 aaaaagtgtgattttattttgtggagactaaaaacaaaattctgaatatttatagggatcatttacttaattaaccc 32507961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 35910844 - 35910800
Alignment:
Q  405 caagattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||| |||||||| |||||||||||| ||| |||||||||||||    
T  35910844 caagactaaaaaatatgattttattttgtagggactaaaaacaaa 35910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 36230032 - 36229952
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| ||| |||||||||| ||| |||||||||| ||||  | || ||||||| | || ||||||||||||||||||||    
T  36230032 taaaaagtgtaattttattttgtagggactaaaaacaaaattctgaatatttataggaaccatttacttaattaaccctta 36229952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 37133424 - 37133500
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaacc 486  Q
    |||||| |||||||||||||| ||| || ||||||| ||||  | || ||||||| |||| ||||||||||||||||    
T  37133424 taaaaagtgtgattttattttgtagggaataaaaacaaaattctaaatatttatagggaccatttacttaattaacc 37133500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 445
Target Start/End: Original strand, 53856235 - 53856271
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaa 445  Q
    |||||||||||| |||||||||||||| |||||||||    
T  53856235 attaaaaaatgtaattttattttatagggactaaaaa 53856271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 12982914 - 12982746
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    ||||||||||||||||| | || |||||||||||||| |||||||| | |||||| ||||| ||||||||||  || ||||||||| |||| ||||||||    
T  12982914 tgagatgaagcgacatgccctcttggtgcaagctgaacatttgaaaaacaaaagtagcaacctagaagaaaatccatgggtgaggcgtgtcaatttgtac 12982815  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttct 181  Q
     ||| |||||||||||||||||||| ||| |||||||||||||| || |||||| ||||| ||||||||    
T  12982814 tttaaaatggagactcaatcaatggggatgaaagaaaacattcatttgcaagaaaagacttattcttct 12982746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 32110560 - 32110719
Alignment:
Q  15 agatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtacat 114  Q
    ||||||||||||||| | || |||||||||||||| |||||||| | |||||| | |||||||||||||||||||||||||||   |||||||||||| |    
T  32110560 agatgaagcgacatgccctcttggtgcaagctgaacatttgaaaaa-aaaagtagtaacatagaagaaaagtcacgggtgaggagcgtcgatttgtacct 32110658  T
Q  115 tacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttct 181  Q
    || |||||||||||||||||||||||| |||      ||||| ||||||||| ||||||||| ||||    
T  32110659 taaaatggagactcaatcaatggagatgaaa------attcattttcaagaaaagactcattattct 32110719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 7466475 - 7466551
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaacc 486  Q
    |||||| |||||||||||||||||  |||||||||| ||||  | || |||||||||||| ||||||||||||||||    
T  7466475 taaaaagtgtgattttattttataaggactaaaaacaaaattctaaatatttataaggaccatttacttaattaacc 7466551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 12729429 - 12729391
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  12729429 taaaaaatgtgattttattttgtagagactaaaaacaaa 12729391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 27771884 - 27771964
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa--tgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||||||||||||||||| |||||||| ||||||||  || | || ||||||||||||||   ||||||||||||||||    
T  27771884 taaaaaatgtgattttattttgtagagactgaaaacaaaactg-tgaatatttataaggactaaaaacttaattaaccctta 27771964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 31842629 - 31842671
Alignment:
Q  407 agattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  31842629 agattaaaaaatgtgattttattttgtagggactaaaaacaaa 31842671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 6153793 - 6153834
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  6153793 agtccctataaaataaaatcgcactttttagtccttataaaa 6153834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 10117927 - 10117963
Alignment:
Q  260 ctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10117927 ctataaaataaaatcgcactttttagtccttgtaaaa 10117963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 34556569 - 34556645
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||| |||||||||||||| ||| ||||||||| ||| |  |||| ||||||| |||| ||||||||||||||||||    
T  34556569 aaaagtgtgattttattttgtagggactaaaaataaaattcttaatatttatagggaccatttacttaattaaccct 34556645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 5385515 - 5385476
Alignment:
Q  257 tccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  5385515 tccctataaaataaaatcacactttttagtccttataaaa 5385476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 7466378 - 7466417
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaa 294  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  7466378 agtccctataaaataaaatcacactttttagtccctgtaa 7466417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 449
Target Start/End: Complemental strand, 13060084 - 13060041
Alignment:
Q  406 aagattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||| |||||||  ||||||||||||||||||||||||||||||    
T  13060084 aagactaaaaaagatgattttattttatagagactaaaaacaaa 13060041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 30579482 - 30579561
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| | |||||||||||| ||| ||||||||||||| |  | || ||||||| |||||| |||||||||||||||||    
T  30579482 taaaaagtatgattttattttgtagggactaaaaacaaaattctgaatatttatagggactaattacttaattaaccctt 30579561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 7466407 - 7466369
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  7466407 taaaaagtgtgattttattttatagggactaaaaacaaa 7466369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 15837474 - 15837436
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  15837474 taaaaaatgtgattttattttgtagggactaaaaacaaa 15837436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 17205196 - 17205234
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  17205196 taaaaaatgtgattttattttgtagggactaaaaacaaa 17205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 18030853 - 18030891
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  18030853 taaaaaatgtgattttattttgtagggactaaaaacaaa 18030891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 22787276 - 22787238
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  22787276 taaaaaatatgattttattttatagggactaaaaacaaa 22787238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 29681677 - 29681599
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| ||| |||||||||||||| |||||||||| ||||  | || ||||| | |||| ||||||||||||||||||    
T  29681677 taaaaagtgtaattttattttatagggactaaaaacaaaattctgaatatttacagggaccatttacttaattaaccct 29681599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 31842534 - 31842456
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| || ||||||||||| ||| ||||||||||||| |  | || |||||||||||| |||||||| |||||||||    
T  31842534 taaaaagtgcgattttattttgtagggactaaaaacaaaattctaaatatttataaggacaatttactttattaaccct 31842456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 1131017 - 1131058
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  1131017 agtccctacaaaataaaatcacactttttagtccttataaaa 1131058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 6366648 - 6366725
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| |||||||||||||| ||| |||||||||  ||||  | || ||||||| |||| |||||||||||||||||    
T  6366648 taaaaagtgtgattttattttgtagggactaaaaataaaattctgaatatttatagggaccatttacttaattaaccc 6366725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 7621183 - 7621142
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  7621183 agtccctacaaaataaaatcacactttttagtccttataaaa 7621142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 14656397 - 14656430
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||| |||||||||||||||||||||||||    
T  14656397 agtccctacaaaataaaatctcactttttagtcc 14656430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 29681648 - 29681689
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  29681648 agtccctataaaataaaattacactttttagtccttataaaa 29681689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 32647215 - 32647178
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  32647215 agtccctacaaaataaaatcacactttttagtccttgt 32647178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 9380946 - 9380894
Alignment:
Q  264 aaaataaaatctcactttttagtccttgtaaaaaattttgtcagcatcttttg 316  Q
    ||||||||||  || | ||||| |||||||||||||||||||||||| |||||    
T  9380946 aaaataaaattgcattctttagaccttgtaaaaaattttgtcagcattttttg 9380894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 449
Target Start/End: Complemental strand, 11784685 - 11784645
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||| | |||||||||||||| |||||||||||||    
T  11784685 attaaaaaatataattttattttatagggactaaaaacaaa 11784645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 7e-38; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 22455976 - 22455808
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    |||||||||| |||||| | || |||||||||||||| |||||||| | |||||| ||||| ||||| ||||| || ||||||||  |||| ||||||||    
T  22455976 tgagatgaagtgacatgccctcttggtgcaagctgaacatttgaaaaacaaaagtagcaacgtagaacaaaagccatgggtgaggtgtgtcaatttgtac 22455877  T
Q  113 attacaatggagactcaatcaatggagataaaagaaaacattcaatttcaagaagagactcattcttct 181  Q
     ||| |||||||||||||||||||| ||| |||||||||||||| || |||||| ||||||||||||||    
T  22455876 tttaaaatggagactcaatcaatggggatgaaagaaaacattcatttgcaagaaaagactcattcttct 22455808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 485
Target Start/End: Complemental strand, 7065080 - 7065005
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaac 485  Q
    |||||| |||||||||||||| |||||||||||||| ||||  | || ||||||| ||||||||||||||||||||    
T  7065080 taaaaactgtgattttattttgtagagactaaaaacaaaattttgaatatttatagggactatttacttaattaac 7065005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 10542854 - 10542799
Alignment:
Q  260 ctataaaataaaatctcactttttagtccttgtaaaaaattttgtcagcatctttt 315  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||    
T  10542854 ctataaaataaaatcgcactttttagtccttgtaaaaaaatttgtcaacatttttt 10542799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 12857688 - 12857608
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| |||||||||||||| ||  ||||||||||||| |  | || |||||||||||| ||||||||||||||||||||    
T  12857688 taaaaagtgtgattttattttgtatggactaaaaacaaaattctgaatatttataaggaccatttacttaattaaccctta 12857608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 21390931 - 21391010
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||  | || ||||| | ||||||||||||||||||||||    
T  21390931 gattaaataatgtgattttattttataga-actaaaaacaaaattctgaatatttacatggactatttacttaattaaccc 21391010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 18397410 - 18397453
Alignment:
Q  406 aagattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  18397410 aagactaaaaaatgtgattttattttatagaaactaaaaacaaa 18397453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 46136690 - 46136652
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  46136690 taaaaaatgtgattttattttatagggactaaaaacaaa 46136652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 51549690 - 51549652
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  51549690 taaaaagtgtgattttattttatagagactaaaaacaaa 51549652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 26507466 - 26507425
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  26507466 gattaaaaaatgtgatttatttttatagagactaaaaacaaa 26507425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 45967405 - 45967482
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| | |||||||||||| ||| ||||||||||||| |  | || ||||||| ||||||||||||||||||||||    
T  45967405 taaaaagtatgattttattttgtagggactaaaaacaaaattctgaatatttatagggactatttacttaattaaccc 45967482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 20209618 - 20209658
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaa 448  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  20209618 gattaaaaaatgtgattttattttgtagggactaaaaacaa 20209658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 21068663 - 21068743
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||||| ||||||||||| || ||||||||||| ||||  | || ||||||| |||| |||||||| |||||||||||    
T  21068663 taaaaaatgcgattttattttgtaaagactaaaaacaaaattctgaatatttatagggaccatttacttgattaaccctta 21068743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 46595741 - 46595665
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| ||||||||||||||||||| ||||||||||||   |||| ||||| |  ||  |||||||||||||||||    
T  46595741 taaaaagtgtgattttattttatagaaactaaaaacaaaattttaatatttacacagatcatttacttaattaaccc 46595665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 444
Target Start/End: Complemental strand, 35941447 - 35941412
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaa 444  Q
    ||||||||||||||||||||||||||| ||||||||    
T  35941447 attaaaaaatgtgattttattttatagggactaaaa 35941412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 43684776 - 43684697
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| |||||||||||||||||| |||||||||| ||||  | || ||||||| ||||||   |||||||||||||||    
T  43684776 taaaaagtgtgattttattttatagggactaaaaacaaaattgtgaatatttatagggactaaaaacttaattaaccctt 43684697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 43741175 - 43741263
Alignment:
Q  261 tataaaataaaatctcactttttagtccttgtaaaaaattttgtcagcatcttttggccttnnnnnnnctttcatcagcatttttagtc 349  Q
    |||||||||||||| ||||||||||||| |||||||| |||  ||||||| ||| | ||||        ||||||||||||||||||||    
T  43741175 tataaaataaaatcacactttttagtccctgtaaaaattttcatcagcatttttagtccttataaacaatttcatcagcatttttagtc 43741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 14091061 - 14091023
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  14091061 taaaaagtgtgattttattttatagggactaaaaacaaa 14091023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 28215835 - 28215797
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  28215835 taaaaaatgtgattttattttataggaactaaaaacaaa 28215797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 40305201 - 40305123
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    ||||||| |||||| ||||| |||| |||||||||||| |  | || |||||||| || ||||||||||||||||||||    
T  40305201 aaaaaatttgatttgattttgtagatactaaaaacaaaattctaaatatttataaagattatttacttaattaaccctt 40305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 43684875 - 43684913
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  43684875 taaaaagtgtgattttattttatagggactaaaaacaaa 43684913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 46510547 - 46510469
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| ||||||||| |||| ||| ||||||||||||| |  | || ||||||| |||| ||||||||||||||||||    
T  46510547 taaaaagtgtgatttttttttgtagggactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccct 46510469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 49804324 - 49804362
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  49804324 taaaaagtgtgattttattttgtagagactaaaaacaaa 49804362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 51053590 - 51053552
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  51053590 taaaaagtgtgattttattttgtagagactaaaaacaaa 51053552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 51194871 - 51194833
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  51194871 taaaaaatgtgattttattttgtagggactaaaaacaaa 51194833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 6330711 - 6330670
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| ||||||||  ||||||||||||||||||||||    
T  6330711 gattaaaaagtgtgatttatttttatagagactaaaaacaaa 6330670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 21091586 - 21091667
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||| |||||||||||||| ||  |||||||||| ||||  | || |||||||  ||| ||||||||||||||||||    
T  21091586 gattaaaaagtgtgattttattttgtatggactaaaaacaaaattctgaatatttatagcgaccatttacttaattaaccct 21091667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 23175879 - 23175838
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    ||||||||||||||||||||  |||||||||||| |||||||    
T  23175879 agtccctataaaataaaatcgtactttttagtccctgtaaaa 23175838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 30925508 - 30925471
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  30925508 aaaaagtgtgattttattttgtagagactaaaaacaaa 30925471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 34340807 - 34340770
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  34340807 agtccctacaaaataaaatcacactttttagtccttgt 34340770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 43684747 - 43684780
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  43684747 agtccctataaaataaaatcacactttttagtcc 43684780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 43684904 - 43684871
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  43684904 agtccctataaaataaaatcacactttttagtcc 43684871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 49804197 - 49804238
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  49804197 agtccctacaaaataaaatcacactttttagtccttataaaa 49804238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 512663 - 512627
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  512663 aaaaatgtgattttattttgtagggactaaaaacaaa 512627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 2118576 - 2118652
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaacc 486  Q
    |||||||| | |||||||||| ||| |||||||||| ||||  | || ||||||| |||| ||||||||||||||||    
T  2118576 taaaaaatataattttattttgtagggactaaaaacaaaattctaaatatttatatggaccatttacttaattaacc 2118652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 449
Target Start/End: Original strand, 6763985 - 6764025
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||| |||||||||| |||| ||||||||||||    
T  6763985 attaaaaaatgtaattttattttgtagaaactaaaaacaaa 6764025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 14091032 - 14091064
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtc 287  Q
    |||||||||||||||||||| ||||||||||||    
T  14091032 agtccctataaaataaaatcacactttttagtc 14091064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 449
Target Start/End: Complemental strand, 33566870 - 33566830
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||| |||||||||||||||||| || ||||||||||    
T  33566870 attaaaaagtgtgattttattttatagggattaaaaacaaa 33566830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 489
Target Start/End: Complemental strand, 43342904 - 43342836
Alignment:
Q  422 attttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||||||| ||| ||||||||||||| |  | || ||||||| |||| |||||||||||||||||||    
T  43342904 attttattttgtagggactaaaaacaaaattctgaatatttatatggaccatttacttaattaaccctt 43342836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 13907057 - 13906947
Alignment:
Q  13 tgagatgaagcgacatgacatcatggtgcaagctgaagatttgaaagataaaagtcgcaacatagaagaaaagtcacgggtgaggcatgtcgatttgtac 112  Q
    |||||||| |||||||| ||||||||||||||  ||  |||||||| |||||||| |||||||| ||||||||  ||| |||||||  ||||||||||||    
T  13907057 tgagatgatgcgacatgccatcatggtgcaagtagatcatttgaaaaataaaagtagcaacataaaagaaaagctacgagtgaggcgcgtcgatttgtac 13906958  T
Q  113 attacaatgga 123  Q
     ||||||||||    
T  13906957 cttacaatgga 13906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 43072941 - 43072863
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| ||||||||||||||||||| ||||||||| ||||  | || ||||||| |||| ||||||||||||||||||    
T  43072941 taaaaactgtgattttattttatagaaactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccct 43072863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 25513567 - 25513647
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| |||||||||||||||| | |||||||||| ||||  | || ||||||| |||| ||||||||||||||||||||    
T  25513567 taaaaagtgtgattttattttatggggactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccctta 25513647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 27689397 - 27689318
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    ||||||||||||||||||||| ||| | ||||||| ||| | || || ||||||| |||| |||||||||||||||||||    
T  27689397 taaaaaatgtgattttattttgtaggggctaaaaagaaaattatgaatatttatagggaccatttacttaattaaccctt 27689318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 41506522 - 41506601
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| |||||||||||||||||| |||||||||| ||||  | || ||||||| |||  |||||||||||||||||||    
T  41506522 taaaaagtgtgattttattttatagggactaaaaacaaaattctgaatatttatagggatcatttacttaattaaccctt 41506601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 8898269 - 8898307
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8898269 taaaaaatgtgattttattttgtagagactaaaaacaaa 8898307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 488
Target Start/End: Original strand, 30085527 - 30085589
Alignment:
Q  427 attttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||| ||||||||||||| |  | || |||||||||||||||||||||||||||||||    
T  30085527 attttatagggactaaaaacaaaattctgaatatttataaggactatttacttaattaaccct 30085589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 40081867 - 40081945
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||||||||||||||| ||| |||||||||  ||||  | || ||||||| |||| ||||||||||||||||||    
T  40081867 taaaaaatgtgattttattttgtagggactaaaaataaaattctgaatatttatagggaccatttacttaattaaccct 40081945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 43073071 - 43073109
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  43073071 taaaaaatgtgattttattttatagggactaaaaacaaa 43073109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 23066594 - 23066670
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaacc 486  Q
    |||||| |||||||||||||| |||||||||||||| ||||  | || |||||||| ||| |||||| |||||||||    
T  23066594 taaaaagtgtgattttattttctagagactaaaaacaaaattttgaatatttataaagaccatttacgtaattaacc 23066670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 449
Target Start/End: Complemental strand, 45803286 - 45803250
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||| |||||||||||||    
T  45803286 aaaaatgtgattttattttatagggactaaaaacaaa 45803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 12847630 - 12847709
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgatt-aacatttataaggactatttacttaattaaccctt 489  Q
    |||||||| |||||||||||||||| || ||||||||||   || ||  |||||| |||| |||||||||||||||||||    
T  12847630 taaaaaatatgattttattttatagggattaaaaacaaaattttgaatgtttatagggaccatttacttaattaaccctt 12847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 19532622 - 19532665
Alignment:
Q  406 aagattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||| |||||| |||||||||||||||||| |||||||||||||    
T  19532622 aagactaaaaagtgtgattttattttatagggactaaaaacaaa 19532665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 23066436 - 23066475
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaa 294  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  23066436 agtccttataaaataaaatcacactttttagtccttgtaa 23066475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 24838271 - 24838350
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| |||||||||||||||||| ||||||| || ||||  | || ||||||||||||||   |||||||||||||||    
T  24838271 taaaaagtgtgattttattttatagggactaaagacaaaattgtgaatatttataaggactaaaaacttaattaaccctt 24838350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 22745121 - 22745083
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  22745121 taaaaagtgtgattttattttatagggactaaaaacaaa 22745083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 22745247 - 22745329
Alignment:
Q  406 aagattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||| |||||| | |||||||||||||||| |||||||||| ||||  | || ||||| | |||| |||||||||||||||||    
T  22745247 aagactaaaaagtttgattttattttatagggactaaaaacaaaattctgaatatttacagggaccatttacttaattaaccc 22745329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 33258483 - 33258561
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| |||||||||| ||||  | || ||||||| |||  ||||||||||||||||||    
T  33258483 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggatcatttacttaattaaccct 33258561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 36808441 - 36808479
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  36808441 taaaaaatgtgattttattttgtagggactaaaaacaaa 36808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 37105053 - 37105015
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  37105053 taaaaaatgtgattttattttgtagggactaaaaacaaa 37105015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 39012515 - 39012477
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  39012515 taaaaagtgtgattttattttatagggactaaaaacaaa 39012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 41492410 - 41492332
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgatt-aacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| |||||||| ||||   || || ||||||| |||| ||||||||||||||||||    
T  41492410 taaaaagtgtgattttattttttagggactaaaagcaaaattttgaatatttatagggaccatttacttaattaaccct 41492332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 43977614 - 43977652
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  43977614 taaaaaatgtgattttattttgtagggactaaaaacaaa 43977652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 44158007 - 44157969
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  44158007 taaaaaatgtgattttattttataaggactaaaaacaaa 44157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 44719605 - 44719567
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  44719605 taaaaagtgtgattttattttgtagagactaaaaacaaa 44719567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 19532656 - 19532619
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  19532656 agtccctataaaataaaatcacactttttagtctttgt 19532619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 22745092 - 22745125
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  22745092 agtccctataaaataaaatcacactttttagtcc 22745125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 23066623 - 23066582
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||| ||| ||||||||||| |||||||||||||||||||||    
T  23066623 agtctctagaaaataaaatcacactttttagtccttgtaaaa 23066582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 24838141 - 24838064
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| |||||||||||||| ||| |||||||||| ||||  | || ||||||| |||| |||||||||||| ||||    
T  24838141 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggaccatttacttaatttaccc 24838064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 24838300 - 24838267
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  24838300 agtccctataaaataaaatcacactttttagtcc 24838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 30085382 - 30085419
Alignment:
Q  257 tccctataaaataaaatctcactttttagtccttgtaa 294  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  30085382 tccctacaaaataaaatcacactttttagtccttgtaa 30085419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 37105177 - 37105258
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||| |||||||||||||| ||| ||| |||||| ||||  | || ||||||| ||||  |||||||||||||||||    
T  37105177 gattaaaaagtgtgattttattttgtagggacaaaaaacaaaattctgaatatttatagggaccgtttacttaattaaccct 37105258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 37143185 - 37143144
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  37143185 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 37143144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 37331271 - 37331312
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| ||||||||||||||||||  ||||||||||||    
T  37331271 gattaaaaagtgtgattttattttataggtactaaaaacaaa 37331312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 39012486 - 39012519
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  39012486 agtccctataaaataaaatcacactttttagtcc 39012519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 39535105 - 39535146
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  39535105 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 39535146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 40659631 - 40659676
Alignment:
Q  256 gtccctataaaataaaatctcactttttagtccttgtaaaaaattt 301  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||||||    
T  40659631 gtccctacaaaataaaataacacttttcagtccttgtaaaaaattt 40659676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 40934490 - 40934523
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  40934490 agtccctataaaataaaatcacactttttagtcc 40934523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 48549709 - 48549786
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaa-atgattaacatttataaggactatttacttaattaaccc 487  Q
    ||||||||||||||||||||| ||| || ||||||||| ||  | || |||||||  ||| |||||||||||||||||    
T  48549709 taaaaaatgtgattttattttgtagggattaaaaacaatattctgaatatttatagagaccatttacttaattaaccc 48549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 48648111 - 48648070
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  48648111 agtccctacaaaataaaatcacactttttagtccttataaaa 48648070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 486
Target Start/End: Complemental strand, 40934519 - 40934443
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaacc 486  Q
    |||||| |||||||||||||||||| |||||||||  ||||  | || ||||| | |||| ||||||||||||||||    
T  40934519 taaaaagtgtgattttattttatagggactaaaaataaaattctgaatatttacagggaccatttacttaattaacc 40934443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 41506551 - 41506519
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtc 287  Q
    |||||||||||||||||||| ||||||||||||    
T  41506551 agtccctataaaataaaatcacactttttagtc 41506519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 490
Target Start/End: Original strand, 25903593 - 25903676
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||||||||||||||||||||||||| |||||||||| ||||  | || ||||||| |||| ||||||||||||||| ||||    
T  25903593 gattaaaaaatgtgattttattttatagggactaaaaacaaaattttaaatatttatagggaccatttacttaattaactctta 25903676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 25900849 - 25900771
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| | |||||||||||||||| |||||||||| ||||  | ||||||||||||||  ||||||||||||||||||    
T  25900849 taaaaagtatgattttattttatagggactaaaaacaaaattctgaacatttataaggatcatttacttaattaaccct 25900771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 41432633 - 41432555
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgatt-aacatttataaggactatttacttaattaaccct 488  Q
    |||||| ||||||||||||||||||  ||||||||||||   || || |||||||||||| ||||||||||||||||||    
T  41432633 taaaaagtgtgattttattttataggaactaaaaacaaaattttgaatatttataaggaccatttacttaattaaccct 41432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 20556065 - 20556142
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| |||||||||||||| |||||||||||||| ||||  | || |||||||| ||| |||||||||||||||||    
T  20556065 taaaaagtgtgattttattttgtagagactaaaaacaaaattctgaatatttataaagaccatttacttaattaaccc 20556142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 449
Target Start/End: Complemental strand, 10300440 - 10300385
Alignment:
Q  394 ggaaaatatttcaagattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||| || ||||| ||||||||||||||||||||| ||| |||||||||||||    
T  10300440 ggaaaattttacaagactaaaaaatgtgattttattttgtagggactaaaaacaaa 10300385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 11723623 - 11723582
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  11723623 agtccctataaaataaaatcacactttttagtccctgtaaaa 11723582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 16970964 - 16970879
Alignment:
Q  406 aagattaaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||| |  | || |||||||   || ||||||||||||||||||||    
T  16970964 aagactaaaaaatgtgattttattttgtagggactaaaaacaaaattctaaatatttatagaaaccatttacttaattaaccctta 16970879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 19030047 - 19029970
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| |||||||||||||| ||| |||||||||| ||||  | || ||||||| |||| |||||||||||||||||    
T  19030047 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccc 19029970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 41738058 - 41738135
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||| | |||||||||||| ||| ||||||||||||| |  | || |||||||||||| |||||||||||||||||    
T  41738058 taaaaactttgattttattttgtagggactaaaaacaaaattctgaatatttataaggaccatttacttaattaaccc 41738135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 490
Target Start/End: Complemental strand, 43927640 - 43927539
Alignment:
Q  391 aaaggaaaatatttcaa-gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||  || ||||||| ||||  | || ||||||| |||| ||||||||||||||| ||    
T  43927640 aaaggaaaatattacaatgactaaaaagtgtgattttattttataaggattaaaaacaaaattctgaatatttatagggaccatttacttaattaactct 43927541  T
Q  489 ta 490  Q
    ||    
T  43927540 ta 43927539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 45194606 - 45194565
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  45194606 gattaaaaagtgtgattttattttatagggactaaaaacaaa 45194565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 5584268 - 5584332
Alignment:
Q  422 attttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaac 485  Q
    ||||||||||||||||||||||||  |||| || || ||||||||| || |||||||||||||||    
T  5584268 attttattttatagagactaaaaataaaattatgaatatttataagtaccatttacttaattaac 5584332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 8846965 - 8846926
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaa 294  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  8846965 agtccctataaaataaaatcacactttttagtccctgtaa 8846926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 725722 - 725764
Alignment:
Q  407 agattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||| |||||||||||||| ||| |||||||||||||    
T  725722 agattaaaaagtgtgattttattttgtagggactaaaaacaaa 725764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 2112475 - 2112437
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  2112475 taaaaagtgtgattttattttatagggactaaaaacaaa 2112437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 6334184 - 6334106
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||  ||||||||| ||| |  | || |||||||||||| ||||||||||||||||||    
T  6334184 taaaaagtgtgattttattttgtaaggactaaaaataaaattctgaatatttataaggaccatttacttaattaaccct 6334106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 8846936 - 8846974
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  8846936 taaaaagtgtgattttattttatagggactaaaaacaaa 8846974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 10300552 - 10300590
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  10300552 taaaaagtatgattttattttatagagactaaaaacaaa 10300590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 11723594 - 11723632
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  11723594 taaaaagtgtgattttattttatagggactaaaaacaaa 11723632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 16971090 - 16971128
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  16971090 taaaaagtgtgattttattttatagcgactaaaaacaaa 16971128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 21099779 - 21099741
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  21099779 taaaaaatgtgattttattttgtagggactaaaaacaaa 21099741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 22304008 - 22304046
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  22304008 taaaaaatgtgattttattttgtagggactaaaaacaaa 22304046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 31765055 - 31765017
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  31765055 taaaaagtgtgattttattttatagggactaaaaacaaa 31765017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 35428914 - 35428876
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  35428914 taaaaagtgtgattttattttgtagagactaaaaacaaa 35428876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 8778301 - 8778342
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||| ||||| ||||||||||||| |||||||    
T  8778301 agtccctataaaatgaaatcacactttttagtccctgtaaaa 8778342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 13500044 - 13500125
Alignment:
Q  409 attaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||||| |||||||||||||| ||| ||||||| || ||||  | || |||||||  ||| |||||||||||||||||||    
T  13500044 attaaaaagtgtgattttattttgtagggactaaatacaaaattctgaatatttatagagaccatttacttaattaaccctt 13500125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 16707221 - 16707184
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||||||||||||||| || ||||||||||||||    
T  16707221 agtccctataaaataaaatcgcaatttttagtccttgt 16707184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 16971119 - 16971082
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  16971119 agtcgctataaaataaaatcacactttttagtccttgt 16971082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 449
Target Start/End: Original strand, 17420439 - 17420468
Alignment:
Q  420 tgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||||||||    
T  17420439 tgattttattttatagagactaaaaacaaa 17420468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 18677106 - 18677147
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  18677106 agtccctacaaaataaaatcacactttttagtccttataaaa 18677147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 19030175 - 19030138
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19030175 agtccctacaaaataaaatcacactttttagtccttgt 19030138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 22039244 - 22039281
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22039244 agtccctacaaaataaaatcacactttttagtccttgt 22039281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 45194574 - 45194615
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  45194574 agtccctataaaataaaatcacactttttaatccttataaaa 45194615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 2112446 - 2112478
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtc 287  Q
    |||||||||||||||||||| ||||||||||||    
T  2112446 agtccctataaaataaaatcacactttttagtc 2112478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 12262812 - 12262732
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| ||| |||||||||| ||| || |||||||||| |  | || ||||||| |||| ||||||||||||||||||||    
T  12262812 taaaaagtgttattttattttgtagggattaaaaacaaaattctaaatatttatagggaccatttacttaattaaccctta 12262732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 29950650 - 29950570
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| |||||||||||||| ||| |||||||||| ||||  | || ||||||| ||||||   ||||||||||||||||    
T  29950650 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggactaaaaacttaattaaccctta 29950570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 16373 - 16295
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||||||||||||||||||| |||||||||| ||||  | || ||||||| |||| ||||||||||||||||||    
T  16373 taaaaaatgtgattttattttatagggactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccct 16295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 31798152 - 31798074
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||| ||| ||||||||||||| |  | || |||||||||||| ||||||||||||||||||    
T  31798152 taaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttataaggacgatttacttaattaaccct 31798074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 53163243 - 53163317
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaa 484  Q
    |||||| | ||||||||||||||||||||||||||| |||| || || ||||||| |||| ||||||||||||||    
T  53163243 taaaaagtatgattttattttatagagactaaaaacaaaattatgaatatttatagggaccatttacttaattaa 53163317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 4525238 - 4525187
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaaaattttgtca 306  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||| ||||    
T  4525238 agtccttacaaaataaaatcgcactttttagtccttgtaaaaaatttcgtca 4525187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 485
Target Start/End: Complemental strand, 46175659 - 46175584
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaac 485  Q
    |||||||| |||||||||||| ||| |||||||||| |||| || || ||||||| |||| |||||||||||||||    
T  46175659 taaaaaatatgattttattttgtagggactaaaaacaaaattatgaatatttatagggaccatttacttaattaac 46175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 11691793 - 11691831
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  11691793 taaaaaatgtgattttattttgtagagactaaaaacaaa 11691831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 17561311 - 17561357
Alignment:
Q  264 aaaataaaatctcactttttagtccttgtaaaaaattttgtcagcat 310  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  17561311 aaaataaaatcacactttttagtccttataaaaaatttcgtcagcat 17561357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 35546381 - 35546343
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  35546381 taaaaagtgtgattttattttatagagactaaaaacaaa 35546343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 36710890 - 36710852
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  36710890 taaaaaatgtgattttattttatagagaccaaaaacaaa 36710852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 484
Target Start/End: Complemental strand, 41752571 - 41752493
Alignment:
Q  407 agattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaa 484  Q
    |||||||||| |||||||||||||| ||| |||||||||| ||||  | || ||||||| |||| ||||||||||||||    
T  41752571 agattaaaaagtgtgattttattttgtagggactaaaaacaaaattctgaatatttatagggaccatttacttaattaa 41752493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 44035667 - 44035629
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44035667 taaaaaatgtaattttattttatagagactaaaaacaaa 44035629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 45953991 - 45953913
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    |||||| |||||||||||||||||| |||||||||| ||||  | || ||||| | |||| ||||||||||||||||||    
T  45953991 taaaaagtgtgattttattttatagggactaaaaacaaaattctgaatatttacagggaccatttacttaattaaccct 45953913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 45953962 - 45954003
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  45953962 agtccctataaaataaaatcacactttttagtccttataaaa 45954003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 30061568 - 30061600
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaa 444  Q
    |||||||||||||||||||||||||||||||||    
T  30061568 aaaaaatgtgattttattttatagagactaaaa 30061600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 45394239 - 45394160
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||||||||| ||||||| ||| ||||||||||||| |  | || ||||||| |||| ||||||||||||||||||||    
T  45394239 taaaaaatgtgatgttattttgtag-gactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccctta 45394160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 48128678 - 48128758
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    ||||||||  |||||||||||||| || ||||||||||| ||||  | || ||||||| |||| |||||||||||||||||    
T  48128678 gattaaaatgtgtgattttattttgtatagactaaaaacaaaattctgaatatttatatggaccatttacttaattaaccc 48128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 28541024 - 28540945
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| | |||||||||||| ||| || |||||||||| |  | || |||||||||||| |||||||||||||||||||    
T  28541024 taaaaagtatgattttattttgtagggattaaaaacaaaattctgaatatttataaggaccatttacttaattaaccctt 28540945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 43563615 - 43563538
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa--tgattaacatttataaggactatttacttaattaaccc 487  Q
    ||||||||||||||||||||| ||| |||||||||||||  || | || ||||||||||||||   |||||||||||||    
T  43563615 taaaaaatgtgattttattttgtagggactaaaaacaaaactg-tgaatatttataaggactaaaaacttaattaaccc 43563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 4183205 - 4183167
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  4183205 taaaaaatgtgattttattttgtagggactaaaaacaaa 4183167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 11899788 - 11899750
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  11899788 taaaaaatgtgattttattttgtagggactaaaaacaaa 11899750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 16852531 - 16852605
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaa 484  Q
    |||||| ||| |||||||||||||| |||||||||| ||||  | || ||||||| |||| ||||||||||||||    
T  16852531 taaaaagtgtaattttattttatagggactaaaaacaaaattttgaatatttatagggaccatttacttaattaa 16852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 20221928 - 20221890
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  20221928 taaaaaatgtgattttatttcatagggactaaaaacaaa 20221890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 488
Target Start/End: Original strand, 24682164 - 24682234
Alignment:
Q  419 gtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||||||||||| |||| ||||||||| ||||  | || ||||||| |||| ||||||||||||||||||    
T  24682164 gtgattttattttgtagaaactaaaaacaaaattttgaatatttatacggaccatttacttaattaaccct 24682234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 484
Target Start/End: Original strand, 26977251 - 26977329
Alignment:
Q  407 agattaaaaaatgtgattttattttatagagactaaaaa-caaatgattaacatttataaggactatttacttaattaa 484  Q
    |||||||||| |||||||||||||||| |||| ||||||  ||||  | || |||||||||||  ||||||||||||||    
T  26977251 agattaaaaagtgtgattttattttattgagattaaaaataaaattctgaatatttataaggataatttacttaattaa 26977329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 36772759 - 36772797
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  36772759 taaaaaatgtgattttattttgtagggactaaaaacaaa 36772797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 40126752 - 40126714
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  40126752 taaaaaatgtgatttatttttatagagactaaaaacaaa 40126714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 40593687 - 40593649
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  40593687 taaaaagtgtgattttattttatagggactaaaaacaaa 40593649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 40593658 - 40593700
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaaa 297  Q
    |||||||||||||||||||| ||||||||||||| | ||||||    
T  40593658 agtccctataaaataaaatcacactttttagtccctataaaaa 40593700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 42489818 - 42489856
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  42489818 taaaaagtgtgattttattttatagagactaaaagcaaa 42489856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 45954122 - 45954160
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  45954122 taaaaagtgtgattttattttatagggactaaaaacaaa 45954160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 49029518 - 49029480
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  49029518 taaaaaatgtgattttattttgtagggactaaaaacaaa 49029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 11935823 - 11935864
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  11935823 agtccctacaaaataaaatcacactttttagtccttataaaa 11935864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 16852560 - 16852519
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  16852560 agtccctataaaataaaattacactttttagtccttataaaa 16852519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 17561460 - 17561538
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgatta-acatttataaggactatttacttaattaaccctta 490  Q
    |||||| |||||||||||||| ||| |||||||||||||  |||| | || | || |||| ||||||||||||||||||||    
T  17561460 taaaaagtgtgattttattttgtagggactaaaaacaaa--attataaatatttagggaccatttacttaattaaccctta 17561538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 25703944 - 25703911
Alignment:
Q  257 tccctataaaataaaatctcactttttagtcctt 290  Q
    |||||||||||||||||| |||||||||||||||    
T  25703944 tccctataaaataaaatcacactttttagtcctt 25703911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 490
Target Start/End: Complemental strand, 26411976 - 26411896
Alignment:
Q  410 ttaaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||||||||| ||||||||| |||| |||||||| ||| |  |||| || ||||| ||||| ||||||||||||||||||    
T  26411976 ttaaaaaatgtggttttattttgtagaaactaaaaataaatttcttaatatatataaagacta-ttacttaattaaccctta 26411896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Original strand, 40593814 - 40593855
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  40593814 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 40593855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 45954151 - 45954118
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  45954151 agtccctataaaataaaatcacactttttagtcc 45954118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 38566650 - 38566727
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaa-atgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||| |||||||||||||| |||||||||||||||| ||  | || ||||||| |||| |||||||||||||||||||    
T  38566650 aaaagtgtgattttattttgtagagactaaaaacaatattctgaatatttatagggaccatttacttaattaaccctt 38566727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 30004595 - 30004674
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctta 490  Q
    ||||||||||||||||| ||| ||| |||||||||| |||| || || |||||||||||| |||||||| |||||||||||    
T  30004595 taaaaaatgtgattttactttgtagggactaaaaacaaaattatgaatatttataaggaccatttactt-attaaccctta 30004674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 20224906 - 20224985
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    ||||||||||||| ||||||| ||| |||||||||| ||||  | || ||||||| |||| |||||||||||||||||||    
T  20224906 taaaaaatgtgatgttattttgtagggactaaaaacaaaattctgaatatttatagggaccatttacttaattaaccctt 20224985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 6656654 - 6656616
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  6656654 taaaaaatgtgattttattttatagggactaaaaacaaa 6656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 28770780 - 28770818
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  28770780 taaaaaatgtgattttattttatagggactaaaaacaaa 28770818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 30187799 - 30187761
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30187799 taaaaaatgtgattttattttatagggactaaaaacaaa 30187761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 33620055 - 33620097
Alignment:
Q  407 agattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  33620055 agattaaaaagtgtgattttattttgtagagactaaaaacaaa 33620097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 489
Target Start/End: Complemental strand, 34578377 - 34578299
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgattaacatttataaggactatttacttaattaaccctt 489  Q
    |||||| |||||||||||||||||| || |||||| ||||  | || ||||||| | || |||||||||||||||||||    
T  34578377 taaaaagtgtgattttattttatagggattaaaaaaaaattctgaatatttataggaaccatttacttaattaaccctt 34578299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 6042382 - 6042302
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    |||||||||||||||||||||||| |||  ||||||||| ||| | | || ||||||||||||||   |||||||||||||    
T  6042382 gattaaaaaatgtgattttattttgtaggaactaaaaacaaaacggtgaatatttataaggactaaaaacttaattaaccc 6042302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 485
Target Start/End: Original strand, 10737819 - 10737894
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaac 485  Q
    |||||||||||||||||||||||||  | ||||||| ||||  | || ||||||| |||| |||||||||||||||    
T  10737819 taaaaaatgtgattttattttataggaaataaaaacaaaattctaaaaatttatagggaccatttacttaattaac 10737894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 5118487 - 5118449
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  5118487 taaaaaatgtgattttattttgtagggactaaaaacaaa 5118449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 6042746 - 6042784
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  6042746 taaaaagtgtgattttattttatagggactaaaaacaaa 6042784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 10862388 - 10862426
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  10862388 taaaaaatgtgattttattttgtagggactaaaaacaaa 10862426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 14347116 - 14347078
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  14347116 taaaaaatgtgattttattttgtagggactaaaaacaaa 14347078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 18279046 - 18279084
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  18279046 taaaaaatgtgattttattttgtagggactaaaaacaaa 18279084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 19617987 - 19617949
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  19617987 taaaaaatgtgattttattttgtagggactaaaaacaaa 19617949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 30239438 - 30239476
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  30239438 taaaaaatgtgattttattttataaggactaaaaacaaa 30239476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 31163332 - 31163370
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  31163332 taaaaaatgtgattttattttataaggactaaaaacaaa 31163370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 33619929 - 33619891
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  33619929 taaaaagtgtgattttattttatagggactaaaaacaaa 33619891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 39986046 - 39986008
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  39986046 taaaaagtgtgattttattttgtagagactaaaaacaaa 39986008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 857528 - 857487
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||||||||| ||||||||||| |||| ||||||||||||    
T  857528 gattaaaaaatgcgattttattttgtagaaactaaaaacaaa 857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 2824245 - 2824330
Alignment:
Q  406 aagattaaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||||||||||||||||||||  | ||   |||||||||||| | || || ||||||| |||  ||||||||||||||||||||    
T  2824245 aagattaaaaaatgtgattttatcatgtatgaactaaaaacaaagttatgaatatttatagggatcatttacttaattaaccctta 2824330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 3463536 - 3463499
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  3463536 agtccctataaaataaaatcacactttttagtctttgt 3463499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 6042775 - 6042742
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  6042775 agtccctataaaataaaatcacactttttagtcc 6042742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 7201103 - 7201066
Alignment:
Q  259 cctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  7201103 cctataaaataaaatcacactttttagtccttataaaa 7201066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 14311365 - 14311324
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  14311365 agtccctacaaaataaaatcacactttttagtccttataaaa 14311324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 18279369 - 18279406
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  18279369 agtccctacaaaataaaatcacactttttagtccttgt 18279406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 20697672 - 20697635
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  20697672 agtccctacaaaataaaatcacactttttagtccttgt 20697635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 33619900 - 33619933
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtcc 288  Q
    |||||||||||||||||||| |||||||||||||    
T  33619900 agtccctataaaataaaatcacactttttagtcc 33619933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 42396847 - 42396884
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgt 292  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  42396847 agtccctacaaaataaaatcacactttttagtccttgt 42396884  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 6563163 - 6563243
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa-tgattaacatttataaggactatttacttaattaaccctta 490  Q
    |||||| ||||| |||||||| ||  ||||||||||||| |  | || || |||| |||||||||||||||||||||||||    
T  6563163 taaaaagtgtgactttattttgtaaggactaaaaacaaaattctaaatatctatagggactatttacttaattaaccctta 6563243  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 25247330 - 25247405
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaacaaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||| || ||||||||||| ||| ||||||||| |||| || || ||||||| |||||  ||||||||||||||||    
T  25247330 aaaaagtgcgattttattttgtagggactaaaaa-aaattatgaatatttatagggactccttacttaattaaccct 25247405  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 25311114 - 25311189
Alignment:
Q  412 aaaaaatgtgattttattttatagagactaaaaacaaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||| || ||||||||||| ||| ||||||||| |||| || || ||||||| |||||  ||||||||||||||||    
T  25311114 aaaaagtgcgattttattttgtagggactaaaaa-aaattatgaatatttatagggactccttacttaattaaccct 25311189  T

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Target: scaffold0483 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 488
Target Start/End: Original strand, 9460 - 9544
Alignment:
Q  405 caagattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccct 488  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| ||||  | || ||||||| |||| ||||||| ||||||||||    
T  9460 caagactaaaaaatgtgattttattttgtagggactaaaaacaaaattctaaatatttatagggaccatttactcaattaaccct 9544  T

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Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 48845 - 48900
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaaaattttgtcagcat 310  Q
    |||||||| ||||||||||| ||||||||||||| | ||||||||||| |||||||    
T  48845 agtccctacaaaataaaatcacactttttagtccctataaaaaattttatcagcat 48900  T

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Target: scaffold0233 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 18625 - 18663
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18625 taaaaaatgtgattttattttgtagagactaaaaacaaa 18663  T

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Target: scaffold0233; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 18498 - 18457
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  18498 gattaaaaagtgtgattttattttgtagggactaaaaacaaa 18457  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 28314 - 28394
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaatgattaac-atttataaggactatttacttaattaaccctta 490  Q
    |||||| || |||||||| |||| | |||||||||||||   ||||  |||||||||||| ||||||||||||||||||||    
T  28314 taaaaactgagattttatattattgggactaaaaacaaaattttaaatatttataaggaccatttacttaattaaccctta 28394  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 146421 - 146341
Alignment:
Q  408 gattaaaaaatgtgattttattttatagagactaaaaac-aaatgattaacatttataaggactatttacttaattaaccc 487  Q
    ||||||||||||||||||||||||  || |||||||||| ||||  | || ||||| | |||| |||||||||||||||||    
T  146421 gattaaaaaatgtgattttattttgaagggactaaaaacaaaattctgaatatttacagggaccatttacttaattaaccc 146341  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 22208 - 22169
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaa 294  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  22208 agtccctataaaataaaatcacactttttagtccctgtaa 22169  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 22179 - 22217
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  22179 taaaaagtgtgattttattttatagggactaaaaacaaa 22217  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 449
Target Start/End: Complemental strand, 352679 - 352641
Alignment:
Q  411 taaaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  352679 taaaaaatgtgattttattttgtagggactaaaaacaaa 352641  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 262870 - 262829
Alignment:
Q  255 agtccctataaaataaaatctcactttttagtccttgtaaaa 296  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  262870 agtccctacaaaataaaatcacactttttagtccttataaaa 262829  T

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Target: scaffold0283 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 449
Target Start/End: Original strand, 3794 - 3830
Alignment:
Q  413 aaaaatgtgattttattttatagagactaaaaacaaa 449  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  3794 aaaaatgtgattttattttgtagggactaaaaacaaa 3830  T

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