View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4586_low_9 (Length: 471)
Name: NF4586_low_9
Description: NF4586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4586_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 11 - 454
Target Start/End: Original strand, 4516930 - 4517373
Alignment:
| Q |
11 |
atcatcatcatcaaagagaaatccacaaccatcattatcatcaaatgttgagttcatcaagttcttctcagaatccaatgactaattctctcaacaatcc |
110 |
Q |
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| T |
4516930 |
atcatcatcatcaaagagaaatccacaaccatcattatcatcaaatgttgagttcatcaaattcttctcagaatccaatgactaattctctcaacaatcc |
4517029 |
T |
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| Q |
111 |
atccttcagtttggccaaatttctacaaaacagcagagaaaattcatccaataaagaacaagagttcactacaaagtgatattacataaagaaacaaata |
210 |
Q |
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| T |
4517030 |
atccttcagtttggccaaatttctacaaaacagcagagaaaattcatccaataaagaacaagagttcactacaaagtgatattacataaagaaacaaata |
4517129 |
T |
|
| Q |
211 |
caatgtttatgtgagttctcctcttctcaaaatttgaatggtatatgaagattgttgtgagactatatattgtgatttgaataatcattacatattagtt |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4517130 |
caatgtttatgtgagttctcctcttctcaaaatttgaatggtacatgaagattgttgtgagactatatattgtgatttgaataatcattacatattagtt |
4517229 |
T |
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| Q |
311 |
gttttgtgagtgcatgtttggagtttctatatagtttctttcaattttaggtgaccctttagtttgaatctatggctttctaagggtgtgggtgatttag |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4517230 |
gttttgtgagtgcatgtttggagtttctatatagtttctttcaattttaggtcaccctttagtttgaatctatggctttctaagggtgtgggtgatttag |
4517329 |
T |
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| Q |
411 |
taactcttttttgatttaataatttattgtttgactcagataat |
454 |
Q |
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| T |
4517330 |
caactcttttttgatttaataatttattgtttgactcagataat |
4517373 |
T |
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