View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4588_high_3 (Length: 500)

Name: NF4588_high_3
Description: NF4588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4588_high_3
NF4588_high_3
[»] chr3 (15 HSPs)
chr3 (201-482)||(23235685-23235966)
chr3 (20-173)||(46485523-46485676)
chr3 (247-482)||(23231793-23232025)
chr3 (333-463)||(23226481-23226611)
chr3 (357-477)||(23196125-23196245)
chr3 (20-97)||(7311393-7311467)
chr3 (233-295)||(23226688-23226750)
chr3 (47-95)||(14475-14523)
chr3 (47-95)||(19286604-19286652)
chr3 (47-95)||(21912520-21912568)
chr3 (47-95)||(33050165-33050213)
chr3 (439-479)||(37754129-37754169)
chr3 (47-95)||(40997568-40997616)
chr3 (47-95)||(41949909-41949957)
chr3 (47-95)||(50901335-50901383)
[»] scaffold0470 (1 HSPs)
scaffold0470 (19-173)||(98-252)
[»] chr8 (18 HSPs)
chr8 (19-173)||(6610810-6610964)
chr8 (20-173)||(2955917-2956070)
chr8 (19-144)||(43633648-43633770)
chr8 (24-173)||(40977541-40977685)
chr8 (20-173)||(43047900-43048044)
chr8 (45-178)||(28153839-28153977)
chr8 (20-113)||(36557093-36557186)
chr8 (90-172)||(22976412-22976494)
chr8 (20-117)||(21595189-21595286)
chr8 (29-146)||(13169802-13169919)
chr8 (47-117)||(31961534-31961605)
chr8 (64-146)||(15254617-15254699)
chr8 (70-146)||(11910500-11910575)
chr8 (72-118)||(15254680-15254726)
chr8 (47-95)||(23615981-23616029)
chr8 (47-95)||(30591649-30591697)
chr8 (47-95)||(30886803-30886851)
chr8 (47-95)||(34852979-34853027)
[»] chr1 (18 HSPs)
chr1 (19-177)||(42886668-42886826)
chr1 (19-173)||(29743407-29743561)
chr1 (19-173)||(44565004-44565158)
chr1 (19-173)||(11376618-11376772)
chr1 (19-178)||(2326806-2326965)
chr1 (19-173)||(15544433-15544577)
chr1 (19-173)||(46833170-46833316)
chr1 (70-173)||(21373963-21374066)
chr1 (26-124)||(261716-261814)
chr1 (19-165)||(49622879-49623014)
chr1 (27-173)||(51621837-51621973)
chr1 (24-118)||(33505722-33505816)
chr1 (125-173)||(33505722-33505770)
chr1 (26-137)||(5155534-5155645)
chr1 (90-129)||(37661968-37662007)
chr1 (123-173)||(27776241-27776291)
chr1 (44-117)||(33112454-33112528)
chr1 (20-67)||(37661940-37661988)
[»] chr2 (20 HSPs)
chr2 (19-177)||(7759341-7759500)
chr2 (20-173)||(16256131-16256284)
chr2 (19-173)||(10355623-10355767)
chr2 (19-173)||(35734563-35734707)
chr2 (20-173)||(43589848-43590001)
chr2 (24-172)||(34210390-34210538)
chr2 (19-200)||(16254893-16255069)
chr2 (19-165)||(28808685-28808826)
chr2 (30-201)||(13173320-13173501)
chr2 (45-116)||(26780785-26780856)
chr2 (31-160)||(88951-89081)
chr2 (45-175)||(31920772-31920892)
chr2 (44-110)||(34041180-34041246)
chr2 (123-160)||(5053826-5053863)
chr2 (47-95)||(11709755-11709803)
chr2 (47-95)||(12371407-12371455)
chr2 (47-95)||(35467182-35467230)
chr2 (47-95)||(35852299-35852347)
chr2 (47-95)||(37425816-37425864)
chr2 (47-95)||(42453684-42453732)
[»] chr7 (13 HSPs)
chr7 (19-185)||(29008660-29008826)
chr7 (24-173)||(1827888-1828037)
chr7 (24-173)||(47645422-47645571)
chr7 (20-165)||(33118639-33118789)
chr7 (20-172)||(12313926-12314068)
chr7 (20-172)||(44119078-44119234)
chr7 (20-166)||(40461182-40461339)
chr7 (26-96)||(21146471-21146541)
chr7 (48-116)||(44982093-44982161)
chr7 (47-95)||(522848-522896)
chr7 (70-110)||(7495099-7495139)
chr7 (47-95)||(32813335-32813383)
chr7 (47-95)||(37467806-37467854)
[»] chr4 (26 HSPs)
chr4 (19-173)||(38024562-38024716)
chr4 (26-177)||(6885061-6885212)
chr4 (20-173)||(42739619-42739772)
chr4 (24-173)||(22443774-22443923)
chr4 (24-173)||(1921144-1921293)
chr4 (20-173)||(55873495-55873648)
chr4 (20-173)||(49284113-49284260)
chr4 (19-145)||(29190983-29191113)
chr4 (19-118)||(37563778-37563877)
chr4 (20-160)||(47497512-47497652)
chr4 (107-172)||(54975768-54975833)
chr4 (20-173)||(29118903-29119046)
chr4 (29-177)||(30548046-30548194)
chr4 (20-170)||(39593245-39593388)
chr4 (73-159)||(8067108-8067194)
chr4 (20-176)||(41279117-41279278)
chr4 (19-117)||(54975768-54975868)
chr4 (44-110)||(3075545-3075611)
chr4 (140-177)||(29190777-29190814)
chr4 (44-97)||(46079045-46079098)
chr4 (47-95)||(3146319-3146367)
chr4 (47-95)||(26497384-26497432)
chr4 (93-161)||(35233755-35233823)
chr4 (47-95)||(36665837-36665885)
chr4 (47-95)||(49316188-49316236)
chr4 (47-95)||(49965247-49965295)
[»] chr5 (16 HSPs)
chr5 (19-178)||(35384150-35384309)
chr5 (20-173)||(1751294-1751447)
chr5 (20-173)||(11726610-11726763)
chr5 (21-164)||(30411433-30411577)
chr5 (20-177)||(37275939-37276096)
chr5 (20-173)||(10329740-10329895)
chr5 (90-177)||(37275315-37275402)
chr5 (72-145)||(17815734-17815807)
chr5 (35-177)||(19265094-19265239)
chr5 (44-177)||(25595518-25595649)
chr5 (47-95)||(670878-670926)
chr5 (47-95)||(2849098-2849146)
chr5 (47-95)||(10646905-10646953)
chr5 (47-95)||(15295970-15296018)
chr5 (47-95)||(30985432-30985480)
chr5 (47-95)||(35858296-35858344)
[»] scaffold0155 (1 HSPs)
scaffold0155 (20-178)||(27979-28137)
[»] chr6 (12 HSPs)
chr6 (26-173)||(11455105-11455255)
chr6 (19-172)||(18227322-18227465)
chr6 (20-94)||(20219057-20219131)
chr6 (20-94)||(22113082-22113156)
chr6 (363-482)||(19118175-19118294)
chr6 (44-158)||(13527807-13527921)
chr6 (47-95)||(5059430-5059478)
chr6 (47-95)||(10839871-10839919)
chr6 (47-95)||(21761328-21761376)
chr6 (47-95)||(25085914-25085962)
chr6 (47-95)||(29918654-29918702)
chr6 (47-95)||(30599282-30599330)


Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 201 - 482
Target Start/End: Complemental strand, 23235966 - 23235685
Alignment:
Q  201 aaatcaaattgggtttaaagacacgtgggttctttccttccttttgactcattccatctttgtttcgtttccattcattctatttcgttgggttcactac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23235966 aaatcaaattgggtttaaagacacgtgggttctttccttccttttgactcattccatctttgtttcgtttccattcattctttttcgttgggttcactac 23235867  T
Q  301 tagggcaaccgtgacatatgaagaaaacagctaccaccaagaggcagcaaccgacaaccaaattgatcagaaccctaagatcactcttacgttcactctt 400  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23235866 tagggcaaccgtgacagatgaagaaaacagccaccgccaagaggcagcaaccgactaccaaattgatcggaaccctaagatcactcttacgttcactctt 23235767  T
Q  401 caactcttctgacccatcgcggctgtcggatctcccgctcgaattggtggcagagattctatgcagacttcctgtcaagctc 482  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23235766 caactcttctgacccatcgcggctgccggatctcccgctcgaattggtggcagagattctatgcagacttcctgtcaagctc 23235685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 46485523 - 46485676
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  ||||||||||||| | |||||||  |||||||||||  ||||| |||||||||||| || |||||||||||||||    
T  46485523 ttagagggataaaaaagtaatttagttttaaaatccctgccctccccttgtgaaccaaacatgtatttgattaaaatccctcccttccccttccctccca 46485622  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  46485623 tcatttgaaccaaacatatatttaattaaaatatctccccttcccttccctccc 46485676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 247 - 482
Target Start/End: Complemental strand, 23232025 - 23231793
Alignment:
Q  247 actcattccatctttgtttcgtttccattcattctatttcgttgggtt-cactac--tagggcaaccgtgacatatgaagaaaacagctaccac------ 337  Q
    ||||||||||| ||  ||||||||||||||||||| |||||| ||||| ||||||  |||||||||||||||| |||||| ||||| | |||||          
T  23232025 actcattccatattcatttcgtttccattcattctttttcgtagggtttcactacgatagggcaaccgtgacagatgaaggaaacaaccaccacgacgac 23231926  T
Q  338 caagaggcagcaaccgacaaccaaattgatcagaaccctaagatcactcttacgttcactcttcaactcttctgacccatcgcggctgtcggatctcccg 437  Q
    |||||||| ||| ||||| |||||||||||  |||| || |||||||||||            ||||||||   |||||||||||||| |||||||||||    
T  23231925 caagaggcggcatccgacgaccaaattgatgggaactcttagatcactctt------------caactctttccacccatcgcggctgccggatctcccg 23231838  T
Q  438 ctcgaattggtggcagagattctatgcagacttcctgtcaagctc 482  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23231837 ctcgaattggtggcagagattctatgcagacttcctgtcaagctc 23231793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 463
Target Start/End: Complemental strand, 23226611 - 23226481
Alignment:
Q  333 accaccaagaggcagcaaccgacaaccaaattgatcagaaccctaagatcactcttacgttcactcttcaactcttctgacccatcgcggctgtcggatc 432  Q
    |||||||||||||||||   ||| |||||||||||  ||||||||| || ||||||| |||||||||||| |||||| |||||  | | |||| | ||||    
T  23226611 accaccaagaggcagcaggtgactaccaaattgattggaaccctaaaattactcttatgttcactcttcatctcttccgacccgccaccgctgcccgatc 23226512  T
Q  433 tcccgctcgaattggtggcagagattctatg 463  Q
    |||| ||||||||| |  |||||||||||||    
T  23226511 tcccactcgaattgatctcagagattctatg 23226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 477
Target Start/End: Original strand, 23196125 - 23196245
Alignment:
Q  357 accaaattgatcagaaccctaagatcactcttacgttcactcttcaactcttctgacccatcgcggctgtcggatctcccgctcgaattggtggcagaga 456  Q
    |||||||||||| |||||  |  |||||||||| ||||||| ||||  ||||| |||||| ||  | |||| || |||||| ||||| | ||||||||||    
T  23196125 accaaattgatcggaaccacactatcactcttatgttcacttttcatgtcttccgacccaccgttgttgtctgaactcccgttcgaactagtggcagaga 23196224  T
Q  457 ttctatgcagacttcctgtca 477  Q
    |||||||||| || |||||||    
T  23196225 ttctatgcaggctccctgtca 23196245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 7311467 - 7311393
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatc 97  Q
    ||||||||||||||   |||||||||||||||||| ||| ||||||||  |  |||||||| ||||||||||||||||    
T  7311467 ttagagggataaaa---taatttgattttaaaatctctcgtctccccttctacaccaaacatatatttaattaaaatc 7311393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 23226750 - 23226688
Alignment:
Q  233 tttccttccttttgactcattccatctttgtttcgtttccattcattctatttcgttgggttc 295  Q
    |||||||| |||| | ||||| |||||| ||||| |||||||||||||| |||| ||||||||    
T  23226750 tttccttcgttttcattcattacatcttcgtttcttttccattcattctctttcattgggttc 23226688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 14523 - 14475
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  14523 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 14475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 19286604 - 19286652
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  19286604 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 19286652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 21912568 - 21912520
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  21912568 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 21912520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 33050165 - 33050213
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  33050165 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 33050213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 479
Target Start/End: Complemental strand, 37754169 - 37754129
Alignment:
Q  439 tcgaattggtggcagagattctatgcagacttcctgtcaag 479  Q
    |||||||||| ||||| |||||||||||||| |||||||||    
T  37754169 tcgaattggtcgcagaaattctatgcagactccctgtcaag 37754129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 40997568 - 40997616
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  40997568 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 40997616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 41949957 - 41949909
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  41949957 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 41949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 50901383 - 50901335
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  50901383 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 50901335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 98 - 252
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  98 gttagagggataaaaaagtaatttggttttaaaatccctccccttcccttatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 197  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  198 atcatttgaaccaaacatatatttaattgatatatctccctttcccttccctccc 252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 4e-70; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 6610810 - 6610964
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6610810 gttagagggataaaaaagtaatttggttttaaaatccctccccttcccttatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 6610909  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6610910 atcatttgaaccaaacatatatttaattgatatatctccctttcccttccctccc 6610964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 2956070 - 2955917
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  |||||||||| || | |||||||  ||||||||||| |||||| ||||||||| || |||| |||||||||||||    
T  2956070 ttagagggataaaaaagtaatttagttttaaaatctctaccctccccttgtgaaccaaacatatatttgattaaaatctctccccttcccttccctccca 2955971  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  2955970 tcatttgaaccaaacatatatttaattgaaatatcttcccttcccttccctccc 2955917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 43633770 - 43633648
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||  ||||||||||||||||||||| |||||||||| |     
T  43633770 gttagagggataaaaaagtaatttggttttaaaatccctccccttcccttatgaaccaaacac--atttaattaaaatcccttccc-ccccttccctact 43633674  T
Q  119 atcatttgaaccaaacatatatttaa 144  Q
    ||||||||||||||||||||||||||    
T  43633673 atcatttgaaccaaacatatatttaa 43633648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 40977685 - 40977541
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcat 123  Q
    ||||| |||| ||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| |||||||||||| ||||||||||||     |||||    
T  40977685 agggacaaaacagtaatttagttttaaaatccctcccctcccctcgtgaaccaaacatatatttgattaaaatccctcccctccccttcc-----atcat 40977591  T
Q  124 ttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  40977590 ttgaaccaaacatatatttaattgaaatatctccctttcccttccctccc 40977541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 43048044 - 43047900
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccc-tccc 118  Q
    |||||||||||||||||||||||  ||||||||| ||||| |||||||  |||||||||||          |||||||||| ||||||| ||||| |||     
T  43048044 ttagagggataaaaaagtaatttagttttaaaattcctcccctccccttgtgaaccaaaca----------taaaatccctcccctccctttcccctcct 43047955  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43047954 atcatttgaaccaaacatatatttaattgaaatatctccccttcccttccctccc 43047900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 28153977 - 28153839
Alignment:
Q  45 ttttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaa 144  Q
    ||||||||||||||| ||||||   |||||||||||||| ||||||||||||| ||||||||| ||||||| || || |||||||||||||||| |||||    
T  28153977 ttttaaaatccctcccctccccacgtgaaccaaacacatttttaattaaaatctcttccctcctcttcccttccctcctttgaaccaaacatatgtttaa 28153878  T
Q  145 ttgatatat-----ctccccttcccttccctcccctccc 178  Q
    || | ||||     |||||||| ||||||||||||||||    
T  28153877 ttaaaatatcatccctcccctttccttccctcccctccc 28153839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 36557186 - 36557093
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttcc 113  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||  | ||||||||| |||||| |||||||||||| ||||||||||||    
T  36557186 ttagagggataaaaaagtaatttagttttaaaatccctcccctccccttgtaaaccaaacatatatttgattaaaatccctcccctccccttcc 36557093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 22976494 - 22976412
Alignment:
Q  90 ttaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcc 172  Q
    |||| |||||| |||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  22976494 ttaatatccctccccttccctccccttccatcatttgaaccaaacatatatttaattgaaatatctccctttccctcccctcc 22976412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 21595189 - 21595286
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcc 117  Q
    |||||||||||||||||||||||  ||||||||||  ||  |||||||  ||||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  21595189 ttagagggataaaaaagtaatttagttttaaaatctttctcctccccttctgaaccaaacatatatttgattaaaatccctcccctccctttccctcc 21595286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 13169802 - 13169919
Alignment:
Q  29 taaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaa 128  Q
    ||||| ||||| || |||||||| ||||||| |||| ||  |||||||||||||| ||||||||||||||||  ||||||||  |||| | |  | ||||    
T  13169802 taaaatagtaaattaattttaaagtccctcccctcctcttgtgaaccaaacacatttttaattaaaatccctctcctcccctctcctctccttttatgaa 13169901  T
Q  129 ccaaacatatatttaatt 146  Q
    ||||||||||||||||||    
T  13169902 ccaaacatatatttaatt 13169919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 31961534 - 31961605
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaatt-aaaatcccttccctccccttccctcc 117  Q
    |||||||| |||| ||||||| ||||||||||||||  ||||||| ||||||||| ||||||||| ||||||    
T  31961534 ttaaaatctctcccctccccttatgaaccaaacacacttttaattaaaaatccctcccctcccctcccctcc 31961605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 15254617 - 15254699
Alignment:
Q  64 ccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaatt 146  Q
    |||| |||||||||||||||||||||||||||| |||||  | || | |||||||||| | | ||||||| | ||||||||||    
T  15254617 cccttatgaaccaaacacatatttaattaaaataccttctattccatcccctcccatcttctaaaccaaatacatatttaatt 15254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 11910500 - 11910575
Alignment:
Q  70 tgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaatt 146  Q
    |||| ||||||||  ||||||||||||  |||| ||||||| || |||| || ||||||||||||||||||||||||    
T  11910500 tgaatcaaacacacttttaattaaaatatcttctctcccctcccttccc-tcttttgaaccaaacatatatttaatt 11910575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 118
Target Start/End: Original strand, 15254680 - 15254726
Alignment:
Q  72 aaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||| |||||||||||||||||| |||| |||||| ||||||||    
T  15254680 aaccaaatacatatttaattaaaatctcttcactccccatccctccc 15254726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 23615981 - 23616029
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  23615981 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 23616029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 30591649 - 30591697
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  30591649 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 30591697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 30886851 - 30886803
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  30886851 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 30886803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 34852979 - 34853027
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  34852979 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 34853027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 9e-68; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 42886826 - 42886668
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  42886826 gttagagggataaaaaagtaatttggttttaaaatctctcccctccccttatgaaccaaacacatatttaattaaaatcccttccatccccttcccttcc 42886727  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctcc 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42886726 atcatttgaaccaaacatatatttaattgatatatctccccttcccttcccttccctcc 42886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 29743561 - 29743407
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  29743561 gttagagggataaaaaagtaatttggttttaaaatccctccccttcccttatgaaccaaacacatatttaattaaaatcccttcccttcccttctctccc 29743462  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29743461 atcatttgaaccaaacatatatttaattgatatatctccccttccattccctccc 29743407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 44565158 - 44565004
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| ||||    
T  44565158 gttagagggataaaaaggtaatttgattttaaaatccctcccctccccttatgaaccaaacacatatttaattgaaatctctttcctccccttccttccc 44565059  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44565058 atcatttgaaccaaacatgtatttaattgatatatctccccttcccttccctccc 44565004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 11376772 - 11376618
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  11376772 gttagagggataaaaaagtaatttggttttaaaatctctcccctccccttatgaaccaaacacatatttaattaaaatctcttccctcccattccctccc 11376673  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| |||||||    
T  11376672 atcatttgaaccaaacatatatttaattgatatatctcccttttcctcccctccc 11376618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 2326806 - 2326965
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||| |||||| |||||||| ||||||||||||||| ||||||  |||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  2326806 gttagaggggtaaaaaggtaatttggttttaaaatccctcccctccccgtatgaaccaaatacatatttaattaaaataccttcactccccttccctccc 2326905  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctccc 178  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  2326906 atcatttgaaccaaacatatatataattgatatatctccccttccattccctcccctccc 2326965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 15544577 - 15544433
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||          ||||    
T  15544577 gttagagggataaaaaggtaatttggttttaaaatccctcccctccccttatgaaccaaacacatatttaattaaaatcccttccc----------tccc 15544488  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15544487 atcatttgaaccaaacatgtatttaattgatatatctccccttcccttccatccc 15544433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 46833316 - 46833170
Alignment:
Q  19 gttagagggataaaaaa--gtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctc 116  Q
    |||||||||||||||||  |||||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||          ||    
T  46833316 gttagagggataaaaaaaagtaatttggttttaaaatccttcccctccccttatgaaccaaacacatatttaattaaaatcccttccc----------tc 46833227  T
Q  117 ccatcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  46833226 ccatcatttgaaccaaatatatatttaattgatatatctccccttcccatccctccc 46833170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 21373963 - 21374066
Alignment:
Q  70 tgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaattgatatatctccccttcccttccc 169  Q
    ||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21373963 tgaaccaaacatatatttgattaaaatccctctcctccccttccctcccatcatttgaaccaaacatatatttaattgaaatatctccccttcccttccc 21374062  T
Q  170 tccc 173  Q
    ||||    
T  21374063 tccc 21374066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 261716 - 261814
Alignment:
Q  26 ggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatt 124  Q
    |||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  261716 ggataaaaaagtaatttggttttaaaatctctcccctccccttatgaaccaaacacatatttaattaaaatctcttccctccccttccctcccatcatt 261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 49622879 - 49623014
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||| |||| || |||||||||||||||||||||||||   |||       |||||||||    
T  49622879 gttagagggataaaaaaataatttggttttaaaatccctc-tcttcccttataaaccaaacacatatttaattaaaat---ttc-------ttccctccc 49622967  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttccct 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  49622968 atcatttgaaccaaacatatatttaattgatatatctccccttccct 49623014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 51621837 - 51621973
Alignment:
Q  27 gataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttg 126  Q
    ||||||||||||||||| |||||||||| |||| ||| ||| ||||||||||||||||||||||||||||          || || ||||||||||||||    
T  51621837 gataaaaaagtaatttggttttaaaatctctcccctctccttatgaaccaaacacatatttaattaaaat----------ccatttcctcccatcatttg 51621926  T
Q  127 aaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  51621927 aaccaaacatatatctaattgatatatctctccttcccttccctccc 51621973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 33505816 - 33505722
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||||||| ||||  || || | ||||||||||||    
T  33505816 agggataaaaaagtaatttagttttaaaatccctcccctcccctcgtgaaccaaacatatatttaattgaaatatctccctttcccttccctccc 33505722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 33505770 - 33505722
Alignment:
Q  125 tgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  33505770 tgaaccaaacatatatttaattgaaatatctccctttcccttccctccc 33505722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 5155534 - 5155645
Alignment:
Q  26 ggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcattt 125  Q
    |||||||||||||||||  |||||||||  || | ||||||   ||| ||||||| ||||| ||||||||||||| |||| | ||||| | || || |||    
T  5155534 ggataaaaaagtaatttagttttaaaatatcttccctccccatttgagccaaacatatattcaattaaaatccctccccttctcttcctttccctccttt 5155633  T
Q  126 gaaccaaacata 137  Q
    ||||||||||||    
T  5155634 gaaccaaacata 5155645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 37661968 - 37662007
Alignment:
Q  90 ttaaaatcccttccctccccttccctcccatcatttgaac 129  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  37661968 ttaaaatccctcccctccccttctctcccatcatttgaac 37662007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 27776291 - 27776241
Alignment:
Q  123 tttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||| ||||| |||| || ||||| ||||||||||    
T  27776291 tttgaaccaaacatatatttcattgaaatatatcaccttctcttccctccc 27776241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 33112528 - 33112454
Alignment:
Q  44 attttaaaatccctcctc-tcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcc 117  Q
    |||||||||||||||| | ||||||   ||||||||||||| ||||||||||||  || |||||||||| |||||    
T  33112528 attttaaaatccctccccctccccttgcgaaccaaacacatttttaattaaaatatctcccctcccctttcctcc 33112454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 37661940 - 37661988
Alignment:
Q  20 ttagagggataaaa-aagtaatttgattttaaaatccctcctctcccct 67  Q
    |||||||||||||| |||||||||  ||||||||||||||| |||||||    
T  37661940 ttagagggataaaaaaagtaatttagttttaaaatccctcccctcccct 37661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 3e-61; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 7759341 - 7759500
Alignment:
Q  19 gttagagggataaaaaag-taatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcc 117  Q
    |||||||||||||||||  ||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  7759341 gttagagggataaaaaaaataatttggttttaaaatctctcccctccccttatgaaccaaacacatatttaattaaaatctcttccctcccattccctcc 7759440  T
Q  118 catcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctcc 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7759441 catcatttgaaccaaacatatatttaattgatatatctccccttcctttccctcccctcc 7759500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 16256284 - 16256131
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||  |||| |||||| |||||| |||||||||||| ||||||||||||||||||    
T  16256284 ttagagggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaatcaaacatatatttgattaaaatccctcccctccccttccctccca 16256185  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  16256184 tcatttgaaccaaacatatatttaattgaaatatcttcccttcccttccttccc 16256131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 10355767 - 10355623
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||          | ||||||||||    
T  10355767 gttagagggataaaaaagtaatttggttttaaaatccctcccctccccttatgaaccaaacacatatttaattaaaat----------ctcttccctccc 10355678  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10355677 atcatttgaaccaaacatatatttaattgatatatttccccttcccttccctccc 10355623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 35734563 - 35734707
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||          ||||||||||||    
T  35734563 gttagagggataaaaaagtaatttggttttaaaatccctccccttcccttatgaaccaaacacatatttaattaaaat----------cccttccctccc 35734652  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35734653 atcatttgaaccaaacatatatttaattgatatatctccccttccctcccctccc 35734707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 43589848 - 43590001
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  |||||||||| || | |||||||  |||||||||||  ||||| |||||||| ||| ||||||||||||||||||    
T  43589848 ttagagggataaaaaagtaatttagttttaaaatctctgccctccccttgtgaaccaaacatgtatttgattaaaattcctcccctccccttccctccca 43589947  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  43589948 tcatttgaaccaaacatatatttaattaaaatatctccccttcccttccctccc 43590001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 34210390 - 34210538
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcat 123  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| |||||||||||| ||||||||| |||| |||||||    
T  34210390 agggataaaaaagtaatttagttttaaaatccctcccctcccctcgtgaaccaaacatatatttgattaaaatccctcccctcccctccccttccatcat 34210489  T
Q  124 ttgaaccaaacatatatttaattgatatatctccccttcccttccctcc 172  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  34210490 ttgaaccaaacatatatttaattgaaatatctccctttccctcccctcc 34210538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 16255069 - 16254893
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||          ||||    
T  16255069 gttagagggataaaaaagtaatttggttttaaaatccctccccttcccttatgaaccaaacacatatttaattaaaatcccttccc----------tccc 16254980  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctc-----ccctcccatccgttgatccaaacggaccc 200  Q
    || |||||||||||||||||||||||||||||||||| ||||||||| |||||     ||||||| |||||||| ||||||||||||    
T  16254979 attatttgaaccaaacatatatttaattgatatatcttcccttccctcccctccctttccctcccctccgttgaaccaaacggaccc 16254893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 28808826 - 28808685
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctccccta-----atgaaccaaacacatatttaattaaaatcccttccctccccttcc 113  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||      ||||||||||||||||||||||||||||  ||||||||||         
T  28808826 gttagagggataaaaaagtaatttggttttaaaatccctcccctcccctccccttatgaaccaaacacatatttaattaaaatatcttccctccc----- 28808732  T
Q  114 ctcccatcatttgaaccaaacatatatttaattgatatatctccccttccct 165  Q
         |||||||||||||||||||||||||||||||||||||||||||||||    
T  28808731 -----atcatttgaaccaaacatatatttaattgatatatctccccttccct 28808685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 13173501 - 13173320
Alignment:
Q  30 aaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaac 129  Q
    |||||||| | || |||||||||||||||| ||| |||  |||||||||||  | |||||||||||||||| || |||||| |||| |  || |||||||    
T  13173501 aaaaaagttaattaattttaaaatccctcccctcaccttgtgaaccaaacatgtgtttaattaaaatccctcccttcccctccccttctctcttttgaac 13173402  T
Q  130 caaacatatatttaattgatatatctc---------cccttccctt-ccctcccctcccatccgttgatccaaacggaccca 201  Q
    ||||||||||||||||| | |||||||         |||||||||| ||||||||||| |||| |||| |||||||||||||    
T  13173401 caaacatatatttaattaaaatatctctctttcccgcccttcccttcccctcccctccgatccattgaaccaaacggaccca 13173320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 26780785 - 26780856
Alignment:
Q  45 ttttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctc 116  Q
    ||||||||||||||| ||||||   ||||||||||| |||||||||||||||||||||| |||||| |||||    
T  26780785 ttttaaaatccctcccctccccatgtgaaccaaacatatatttaattaaaatcccttccgtcccctcccctc 26780856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 88951 - 89081
Alignment:
Q  31 aaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccc-tccccttccctcccatcatttgaac 129  Q
    ||||||||| || ||||||||||| ||||  ||||||  |||||||||||||| ||||||||||||  || ||| || ||| ||||    || |||||||    
T  88951 aaaaagtaaattaattttaaaatctctcccttccccttgtgaaccaaacacatttttaattaaaatttctccccttctcctccccttttctcttttgaac 89050  T
Q  130 caaacatatatttaattgatatatctcccct 160  Q
    ||||||||||||||||| | |||||||||||    
T  89051 caaacatatatttaattaaaatatctcccct 89081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 31920772 - 31920892
Alignment:
Q  45 ttttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaa 144  Q
    ||||||||||||||| ||||||   |||||||||||||| ||||||||||||||||     ||||||||||||     |||||||||||||||| |||||    
T  31920772 ttttaaaatccctcccctccccacgtgaaccaaacacatttttaattaaaatccct-----ccccttccctcc-----tttgaaccaaacatatgtttaa 31920861  T
Q  145 ttgatatatctccccttcccttccctcccct 175  Q
    || | |||||  |||| ||||||||| ||||    
T  31920862 ttaaaatatcatccctccccttcccttccct 31920892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 34041246 - 34041180
Alignment:
Q  44 attttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctcccct 110  Q
    |||||| ||||||||| |||||||  |||||||||||||| |||||||||||| | | |||||||||    
T  34041246 attttagaatccctccactccccttttgaaccaaacacatttttaattaaaattcgtcccctcccct 34041180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 5053826 - 5053863
Alignment:
Q  123 tttgaaccaaacatatatttaattgatatatctcccct 160  Q
    |||||||||||||||||||||||| | |||||||||||    
T  5053826 tttgaaccaaacatatatttaattaaaatatctcccct 5053863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 11709755 - 11709803
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  11709755 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 11709803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 12371455 - 12371407
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  12371455 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 12371407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 35467182 - 35467230
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  35467182 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 35467230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 35852347 - 35852299
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  35852347 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 35852299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 37425864 - 37425816
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  37425864 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 37425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 42453684 - 42453732
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  42453684 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 42453732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 29008660 - 29008826
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||  | ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  29008660 gttagagggataaaaaagtaatttggttttaaaatccctcccctccccgtacgaaccaaacacatatttaattaaaatctcttcactccccttccctccc 29008759  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctcccatccgtt 185  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||| |||| | |||||||||    
T  29008760 atcatttgaatcaaacatatatttaattgatatatctccccttccattccttccctttccatccgtt 29008826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 1828037 - 1827888
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcat 123  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| ||||||||| || |||||||||||||| |||||||    
T  1828037 agggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaaccaaacatatatttgattaaaatctctcccctccccttcccttccatcat 1827938  T
Q  124 ttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1827937 ttgaaccaaacatatatttaattgaaatatctccccttcccttccctccc 1827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 47645571 - 47645422
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcat 123  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| ||||||||| || ||||||||||||||| ||||||    
T  47645571 agggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaaccaaacatatatttgattaaaatctctcccctccccttccctctcatcat 47645472  T
Q  124 ttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  47645471 ttgaaccaaacatatatttaattgaaatatcttcccttcccttccctccc 47645422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 33118789 - 33118639
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaa-----tgaaccaaacacatatttaattaaaatcccttccctccccttccc 114  Q
    |||||||||||| ||||||||||  ||||||||||||||| ||||||||      ||||||||||| |||||| ||||||||| ||||||||||||||||    
T  33118789 ttagagggataataaagtaatttagttttaaaatccctcccctcccctacccttgtgaaccaaacatatatttgattaaaatctcttccctccccttccc 33118690  T
Q  115 tcccatcatttgaaccaaacatatatttaattgatatatctccccttccct 165  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33118689 tctcatcatttgaaccaaacatatatttaattgaaatatctccccttccct 33118639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 12313926 - 12314068
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    ||||||||||||||||||||||   ||||||||||||||| ||||||   |||||||||||||||||||||||||||| ||||          |||||||    
T  12313926 ttagagggataaaaaagtaattcagttttaaaatccctcccctccccctgtgaaccaaacacatatttaattaaaatctcttc----------cctccca 12314015  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcc 172  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12314016 tcatttgaaccaaacatatatttaattgaaatatctccccttcccttccctcc 12314068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 44119078 - 44119234
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccct---- 115  Q
    ||||| |||||||||||||||||  |||||||||||||||  ||||||  ||||||||||| |||||| |||||||||| | |||| ||| |||||        
T  44119078 ttagatggataaaaaagtaatttagttttaaaatccctcccatccccttctgaaccaaacatatatttgattaaaatccatccccttcccatccctccca 44119177  T
Q  116 cccatcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcc 172  Q
    ||||||||||||||||||||||||||||||||| |||| |  |||||||||||||||    
T  44119178 cccatcatttgaaccaaacatatatttaattgaaatatttttccttcccttccctcc 44119234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 40461182 - 40461339
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaacc-aaacacatatttaattaaaat----------cccttccctccc 108  Q
    ||||||||||| ||||||||||| |||||||||| ||| | || || |  |||||| ||||| |||||| ||||||||          ||||||||| ||    
T  40461182 ttagagggatagaaaagtaatttaattttaaaattcctacccttcctttgtgaacccaaacatatatttgattaaaattcctcatctccccttcccttcc 40461281  T
Q  109 cttccctcccatcatttgaaccaaacatatatttaattgatatatctccccttccctt 166  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40461282 tttccctcccatcatttgaaccaaacatatatttaattgaaatatctccccttccctt 40461339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 21146471 - 21146541
Alignment:
Q  26 ggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaat 96  Q
    |||||||| |||||  | |||||||||| | ||| |||||||  |||||||||||||||||||||||||||    
T  21146471 ggataaaatagtaaaataattttaaaattcatcccctccccttgtgaaccaaacacatatttaattaaaat 21146541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 44982161 - 44982093
Alignment:
Q  48 taaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctc 116  Q
    ||||||||||||||| || |  ||||||||||| |||| ||||||||||||||  |||||||| |||||    
T  44982161 taaaatccctcctctacctttgtgaaccaaacatatatgtaattaaaatccctcacctcccctcccctc 44982093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 522848 - 522896
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  522848 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 522896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 7495139 - 7495099
Alignment:
Q  70 tgaaccaaacacatatttaattaaaatcccttccctcccct 110  Q
    ||||||||||| |||||||||||||||  ||||||||||||    
T  7495139 tgaaccaaacatatatttaattaaaatatcttccctcccct 7495099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 32813335 - 32813383
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  32813335 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 32813383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 37467854 - 37467806
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  37467854 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 37467806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 38024562 - 38024716
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||| |||||||||||||||||| |||||||||| |||| ||||| | |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  38024562 gttagaaggataaaaaagtaatttggttttaaaatctctcccctccctttatgaaccaaacacatatttaattaaaattcattccctccccttccctccc 38024661  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38024662 atcatttgaaccaaacatatatttaattgatatatctccccttccctttcctccc 38024716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 6885061 - 6885212
Alignment:
Q  26 ggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcattt 125  Q
    ||||||||| |||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  6885061 ggataaaaaggtaatttgattttaaaattcctccccttcccttatgaaccaaacacatatttaattaaaatcccttctctccccctacctcccatcattt 6885160  T
Q  126 gaaccaaacatatatttaattgatatatctccccttcccttccctcccctcc 177  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  6885161 gaaccaaatatatatttaattgatatatctctccttctcttccctcccctcc 6885212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 42739619 - 42739772
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  ||||||||| ||||| |||||||  ||||||||||| |||||| |||||||||||| |||||||||||| |||||    
T  42739619 ttagagggataaaaaagtaatttagttttaaaattcctcccctccccttgtgaaccaaacatatatttgattaaaatccctcccctccccttccgtccca 42739718  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  42739719 tcatttgaaccaaacatatatttaattgaaatatcttcccttcccttccctccc 42739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 173
Target Start/End: Original strand, 22443774 - 22443923
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcat 123  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| |||||||||||| ||||||||| |||| |||||||    
T  22443774 agggataaaaaagtaatttagttttaaaatccctcccctcccctcgtgaaccaaacatatatttgattaaaatccctcccctcccctccccttccatcat 22443873  T
Q  124 ttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22443874 ttgaaccaaacatatatttaattgaaatatctccctttcccttccctccc 22443923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 1921293 - 1921144
Alignment:
Q  24 agggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcat 123  Q
    |||||||||||||||||||  ||||||||||||||| || ||||  ||||||||||| |||||| |||||||||||| ||||||||| |||| |||||||    
T  1921293 agggataaaaaagtaattttgttttaaaatccctcccctaccctcgtgaaccaaacatatatttgattaaaatccctcccctcccctccccttccatcat 1921194  T
Q  124 ttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  1921193 ttgaaccaaacatatatttaattgaaatatctccctttcccttccctccc 1921144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 55873648 - 55873495
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||| |||||||||| || | |||||||  |||||||||||||||||||||||||||| |  |||||||||||||| | |    
T  55873648 ttagagggataaaaaagtaatttggttttaaaatctcttccctccccttgtgaaccaaacacatatttaattaaaatctcccccctccccttcccttcta 55873549  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    || ||||||||||| |||||||||||||||||||||| | ||| ||| ||||||    
T  55873548 tcgtttgaaccaaatatatatttaattgatatatctctcattctctttcctccc 55873495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 49284113 - 49284260
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  |||||||||| |||| || || |  ||||||||||| |||||| |||||||||||     |||||||||||||||    
T  49284113 ttagagggataaaaaagtaatttagttttaaaatctctccccttccttg-tgaaccaaacatatatttgattaaaatccc-----tccccttccctccca 49284206  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  49284207 tcatttgaaccaaacatatatttaattgaaatatctcccattcccttccctccc 49284260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 29191113 - 29190983
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccct--- 115  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||       
T  29191113 gttagagggataaaaaggtaatttggttttaaaatccctcccctcccgta-tgaaccaaacacatacttaattaaaatcccttcactccccttcccttcc 29191015  T
Q  116 --cccatcatttgaaccaaacatatatttaat 145  Q
      ||||||||||||||||||||||||||||||    
T  29191014 ctcccatcatttgaaccaaacatatatttaat 29190983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 37563877 - 37563778
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||||||||| ||| |||||| |||||||||    
T  37563877 gttagagggataaaaaagtaatttgattttaaaatctctcccctccccttatgaaccaaacatatatttaattaaaatctctttcctccctttccctccc 37563778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 47497652 - 47497512
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||| | ||||||||| ||  |||||||  ||||||||||| | |||||||||||||| || ||||| | |||||| ||     
T  47497652 ttagagggataaaaaagtaatttggtgttaaaatccttcacctccccttgtgaaccaaacatacatttaattaaaatctctcccctctctttcccttccc 47497553  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctcccct 160  Q
    || ||||||||||||| |||||||||| |||||||||||||    
T  47497552 tcttttgaaccaaacacatatttaattaatatatctcccct 47497512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 54975833 - 54975768
Alignment:
Q  107 cccttccctcccatcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcc 172  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54975833 cccttccctcccatcatttgaaccaaatatatatttaattgatatatctccccttcccttccctcc 54975768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 29119046 - 29118903
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  ||||||||||||||| ||| | |  ||||||||||| |||||| ||||||||| || |||||||          |    
T  29119046 ttagagggataaaaaagtaatttagttttaaaatccctcccctctctttgtgaaccaaacatatatttgattaaaatctctcccctccc----------a 29118957  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| || ||||||    
T  29118956 tcatttgaaccaatcatatatttaattgaaatatctccccttccatttcctccc 29118903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 30548194 - 30548046
Alignment:
Q  29 taaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaa 128  Q
    ||||| ||||| || |||||||| |  |||| || |||| ||||||||||||||| |||||||||||| | | | ||  ||||||||||| || ||||||    
T  30548194 taaaacagtaaattaattttaaactttctccccttcccttatgaaccaaacacatttttaattaaaattcatccactatccttccctcccctcttttgaa 30548095  T
Q  129 ccaaacatatatttaattgatatatctccccttcccttccctcccctcc 177  Q
    ||||||| |||||||||| | |||||||||||||||| |||||| ||||    
T  30548094 ccaaacacatatttaattaaaatatctccccttccctcccctcctctcc 30548046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 170
Target Start/End: Original strand, 39593245 - 39593388
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    ||||| ||||||||| |||||||| | |||||| |||||  |||||||  ||||||||||| | |||||||||||||| || |||||||||||||         
T  39593245 ttagaaggataaaaaggtaatttggtgttaaaa-ccctcacctccccttctgaaccaaacatacatttaattaaaatctctcccctccccttccc----- 39593338  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccct 170  Q
    || ||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  39593339 tcttttgaaccaaacacatatttaattaatatatctcccc-tcccttccct 39593388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 8067194 - 8067108
Alignment:
Q  73 accaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaattgatatatctcccc 159  Q
    |||||||| |||||||||||||||  ||| | ||||||||||||| | | ||||||||||||||||||||||||||||||| |||||    
T  8067194 accaaacatatatttaattaaaatatctttcatccccttccctcctaccgtttgaaccaaacatatatttaattgatatatgtcccc 8067108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 176
Target Start/End: Complemental strand, 41279278 - 41279117
Alignment:
Q  20 ttagagggataaaaaa-gtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||||||||||||| | |||||| | | |||||| || | |||||||  ||||||||| ||||||||||||||||| ||| |||||||||| | |  |    
T  41279278 ttagagggataaaaaaagcaatttggtat-aaaatctcttccctccccttgtgaaccaaatacatatttaattaaaattcctcccctcccctt-catttc 41279181  T
Q  119 atcatttgaaccaaacatat------atttaattgatatatctccccttcccttccctcccctc 176  Q
    ||| ||||||||||||||||      ||||||||||||||||| ||||||| ||||||||||||    
T  41279180 atcgtttgaaccaaacatatatttaaatttaattgatatatcttcccttcctttccctcccctc 41279117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 54975868 - 54975768
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaa--tgaaccaaacacatatttaattaaaatcccttccctccccttccctc 116  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||| | |  ||||||||| | |||||||||| | ||  || |||| ||||||||||    
T  54975868 gttagagggataaaaaagtaatttgattttaaaatcccttccctcccatcatttgaaccaaatatatatttaattgatatatctccccttcccttccctc 54975769  T
Q  117 c 117  Q
    |    
T  54975768 c 54975768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 3075545 - 3075611
Alignment:
Q  44 attttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctcccct 110  Q
    ||||||||||| |||| |||||||  |||||||||||||| ||||||||||||  ||||| ||||||    
T  3075545 attttaaaatctctcccctccccttgtgaaccaaacacatttttaattaaaatttcttccatcccct 3075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 29190814 - 29190777
Alignment:
Q  140 tttaattgatatatctccccttcccttccctcccctcc 177  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  29190814 tttaattgatatatctccccttccattccatcccctcc 29190777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 46079045 - 46079098
Alignment:
Q  44 attttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatc 97  Q
    |||||||||||| |||| ||||||  ||||| |||||||| |||||||||||||    
T  46079045 attttaaaatccttcctttccccttgtgaactaaacacatttttaattaaaatc 46079098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 3146367 - 3146319
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  3146367 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 3146319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26497384 - 26497432
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  26497384 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 26497432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 35233823 - 35233755
Alignment:
Q  93 aaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaattgatatatctcccctt 161  Q
    ||||||||||||||  |||||||||  || ||||||| ||||||| |||||||| | |||| |||||||    
T  35233823 aaatcccttccctcttcttccctccactcttttgaactaaacatacatttaattaaaatatttcccctt 35233755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 36665885 - 36665837
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  36665885 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 36665837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 49316236 - 49316188
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  49316236 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 49316188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 49965295 - 49965247
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  49965295 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 49965247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 35384309 - 35384150
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  35384309 gttagagggataaaaaagtaatttgattttaaaatctctcccctcccattatgaaccaaacacatatttaattaaaatctcttcccttcccttccgtccc 35384210  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctccc 178  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||    
T  35384209 atcatttgaaccaaacatatatttaattgatatatctcctctttgcttcccttccctccc 35384150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 1751447 - 1751294
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| ||||||||| || ||||||||||||||||||    
T  1751447 ttagagggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaaccaaacatatatttgattaaaatctctcccctccccttccctccca 1751348  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1751347 tcatttgaaccaaacatatatttaattgaaatatctccccttcccttccctccc 1751294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 11726610 - 11726763
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| ||||||||| || ||||||| ||||||||||    
T  11726610 ttagagggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaaccaaacatatatttgattaaaatctctcccctccctttccctccca 11726709  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11726710 tcatttgaaccaaacatatatttaattgaaatatctccccttcccttccctccc 11726763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 30411433 - 30411577
Alignment:
Q  21 tagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctcccc-ttccctccca 119  Q
    ||||||||||||||||||||||| ||||||||||| |||  | |||| ||||| |||||| |||||||||||||||| ||||| ||||| ||||||||||    
T  30411433 tagagggataaaaaagtaatttggttttaaaatccatcccattcccttatgaatcaaacatatatttaattaaaatctcttccttcccccttccctccca 30411532  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttccc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30411533 tcatttgaaccaaacatatatttaattgatatatctccccttccc 30411577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 37276096 - 37275939
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    ||||||||||| ||||||||| |  |||||||||| |||| |||||||  ||||||||||  |||||| ||| |||||||| ||||||||||||||||||    
T  37276096 ttagagggatagaaaagtaatgtagttttaaaatctctcccctccccttgtgaaccaaacctatatttgattgaaatccctcccctccccttccctccca 37275997  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctcc 177  Q
     |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  37275996 ccatttgaaccaaacatatatttaattgaaatatctccccttcctttccctcctctcc 37275939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 10329740 - 10329895
Alignment:
Q  20 ttagagggataaaa--aagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcc 117  Q
    ||||||||||||||  |||||||||  |||||||||||||||  ||||||  ||||||||||| |||||| ||||||||| || ||||| | ||||||||    
T  10329740 ttagagggataaaaaaaagtaatttagttttaaaatccctcccatccccttgtgaaccaaacatatatttgattaaaatctctcccctctcattccctcc 10329839  T
Q  118 catcatttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  10329840 catcatttgaaccaaacatatatttaattgaaatatctccccttcctttccctccc 10329895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 37275315 - 37275402
Alignment:
Q  90 ttaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctcc 177  Q
    |||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||    
T  37275315 ttaaaatctctcccctccccttccctcccaccatttgaaccaaacatatatttaattgaaatatctcccattcctttccctcctctcc 37275402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 17815807 - 17815734
Alignment:
Q  72 aaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatatttaat 145  Q
    |||||||||||| ||||||||||||||||||||||  || ||||| | ||  ||||| ||||||||||||||||    
T  17815807 aaccaaacacatttttaattaaaatcccttccctcttctcccctctcctctattgaatcaaacatatatttaat 17815734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 177
Target Start/End: Complemental strand, 19265239 - 19265094
Alignment:
Q  35 agtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaac 134  Q
    ||||| || |||||||||| |||||  |||||| || || ||||||||| ||| |||||||||  ||   |||||| |||| ||||| |||||| |||||    
T  19265239 agtaaattaattttaaaattcctcccttcccctcataaatcaaacacattttttattaaaatcaattttgtcccct-cccttccatcttttgaatcaaac 19265141  T
Q  135 atatatttaattgatatatctcccct----tcccttccctcccctcc 177  Q
    |||||||||||| | |||||||| ||    |||||||||||||||||    
T  19265140 atatatttaattaaaatatctcctctcttctcccttccctcccctcc 19265094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 25595518 - 25595649
Alignment:
Q  44 attttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatattta 143  Q
    ||||||||||  ||||||||||||  |||||||| ||||| ||||||||||||| ||  | |||| | | ||||| || ||||||| |||||||||||||    
T  25595518 attttaaaatttctcctctccccttgtgaaccaa-cacatttttaattaaaatctctctcatcccgtcctctcccctcttttgaac-aaacatatattta 25595615  T
Q  144 attgatatatctccccttcccttccctcccctcc 177  Q
    ||| |  ||||| |||| || |||||||||||||    
T  25595616 attaaattatctaccctccctttccctcccctcc 25595649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 670878 - 670926
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  670878 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 670926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 2849146 - 2849098
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  2849146 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 2849098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 10646905 - 10646953
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  10646905 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 10646953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 15295970 - 15296018
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  15295970 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 15296018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 30985432 - 30985480
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  30985432 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 30985480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 35858344 - 35858296
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  35858344 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 35858296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 28137 - 27979
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccca 119  Q
    ||||| |||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| ||||||||| || || |||||||||||||||    
T  28137 ttagatggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaaccaaacatatatttgattaaaatctctcccgtccccttccctccca 28038  T
Q  120 tcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcccctccc 178  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  28037 tcatttgaaccaaacatatatttaattgaaatatcttcccttcccttcccttccctccc 27979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 4e-45; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 11455255 - 11455105
Alignment:
Q  26 ggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaa---atcccttccctccccttccctcccatca 122  Q
    |||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| |||||| ||||||   |||||| || ||||||||||||| ||||    
T  11455255 ggataaaaaagtaatttagttttaaaatccctcccctccccttgtgaaccaaacatatatttgattaaattaatccctcccgtccccttccctcctatca 11455156  T
Q  123 tttgaaccaaacatatatttaattgatatatctccccttcccttccctccc 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11455155 tttgaaccaaacatatatttaattgaaatatctccccttcccttccctccc 11455105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 18227465 - 18227322
Alignment:
Q  19 gttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctccc 118  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||          ||| ||||||||    
T  18227465 gttagagggataaaaaagtaatttggttttaaaatccctcccctccccttatgaaccaaacacatatttaattaaaat----------cccgtccctccc 18227376  T
Q  119 atcatttgaaccaaacatatatttaattgatatatctccccttcccttccctcc 172  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  18227375 atcatttgaaccaaacatatatttaattgatatacctcccattctcttccctcc 18227322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 20219131 - 20219057
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaa 94  Q
    |||||||||||||||||||||||| ||||||||||||| | | |||||  |||||||||||||||||||||||||    
T  20219131 ttagagggataaaaaagtaatttggttttaaaatcccttcccaccccttgtgaaccaaacacatatttaattaaa 20219057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 22113156 - 22113082
Alignment:
Q  20 ttagagggataaaaaagtaatttgattttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaa 94  Q
    |||||||||||||||||||||||| ||||||||||||| | | |||||  |||||||||||||||||||||||||    
T  22113156 ttagagggataaaaaagtaatttggttttaaaatcccttcccaccccttgtgaaccaaacacatatttaattaaa 22113082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 482
Target Start/End: Original strand, 19118175 - 19118294
Alignment:
Q  363 ttgatcagaaccctaagatcactcttacgttcactcttcaact-cttctgacccatcgcggctgtcggatctcccgctcgaattggtggcagagattcta 461  Q
    |||||||||||||||| |||||||||| ||||||| |||| || |||||  |||| ||| |||| | ||||||||| ||||| ||||||||||||||||     
T  19118175 ttgatcagaaccctaaaatcactcttatgttcacttttcatctgcttctc-cccaccgccgctgcccgatctcccgttcgaactggtggcagagattctg 19118273  T
Q  462 tgcagacttcctgtcaagctc 482  Q
    ||||| ||||| || ||||||    
T  19118274 tgcaggcttcccgtgaagctc 19118294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 13527807 - 13527921
Alignment:
Q  44 attttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaatcccttccctccccttccctcccatcatttgaaccaaacatatattta 143  Q
    |||||||||||||| |  |||| |  |||| ||||||||  ||||||||||||  || ||||||| | ||||||  |  ||||||||||||||||| |||    
T  13527807 attttaaaatcccttccttccctttgtgaatcaaacacaattttaattaaaatttctcccctcccatcccctcctcttttttgaaccaaacatataatta 13527906  T
Q  144 attgatatatctccc 158  Q
    ||| | |||||||||    
T  13527907 attaaaatatctccc 13527921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 5059478 - 5059430
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  5059478 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 5059430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 10839871 - 10839919
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  10839871 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 10839919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 21761328 - 21761376
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  21761328 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 21761376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 25085962 - 25085914
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  25085962 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 25085914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 29918702 - 29918654
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  29918702 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 29918654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 30599282 - 30599330
Alignment:
Q  47 ttaaaatccctcctctcccctaatgaaccaaacacatatttaattaaaa 95  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||    
T  30599282 ttaaaatccctcccctccccttgtgaaccaaacacacttttaattaaaa 30599330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University