View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4591_high_1 (Length: 644)

Name: NF4591_high_1
Description: NF4591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4591_high_1
NF4591_high_1
[»] chr5 (27 HSPs)
chr5 (16-625)||(14705732-14706341)
chr5 (545-625)||(14713857-14713937)
chr5 (104-152)||(36796628-36796676)
chr5 (116-152)||(499652-499688)
chr5 (104-155)||(10771806-10771857)
chr5 (108-155)||(11615572-11615619)
chr5 (104-155)||(19177546-19177597)
chr5 (106-152)||(17369306-17369352)
chr5 (108-154)||(27153259-27153305)
chr5 (104-152)||(13508541-13508589)
chr5 (104-156)||(31723906-31723958)
chr5 (106-152)||(20982133-20982179)
chr5 (106-152)||(34198524-34198570)
chr5 (110-152)||(42034167-42034209)
chr5 (111-152)||(14331474-14331515)
chr5 (106-228)||(14714683-14714810)
chr5 (104-161)||(40335785-40335842)
chr5 (115-152)||(41419431-41419468)
chr5 (115-152)||(41534550-41534587)
chr5 (104-148)||(4855796-4855840)
chr5 (120-152)||(14932413-14932445)
chr5 (112-152)||(28578954-28578994)
chr5 (104-152)||(32194013-32194061)
chr5 (104-156)||(33961784-33961836)
chr5 (106-158)||(35135567-35135619)
chr5 (106-162)||(37968980-37969035)
chr5 (116-152)||(39594920-39594956)
[»] chr4 (27 HSPs)
chr4 (545-625)||(28889675-28889755)
chr4 (104-151)||(1017129-1017176)
chr4 (89-152)||(24193618-24193681)
chr4 (104-155)||(32420976-32421027)
chr4 (104-154)||(18628472-18628522)
chr4 (104-148)||(18512440-18512484)
chr4 (116-152)||(27043751-27043787)
chr4 (104-168)||(56186803-56186867)
chr4 (104-159)||(22845620-22845674)
chr4 (106-152)||(1075561-1075607)
chr4 (104-154)||(19305027-19305077)
chr4 (106-152)||(28259376-28259422)
chr4 (104-152)||(7367975-7368023)
chr4 (116-155)||(8420908-8420948)
chr4 (111-151)||(10365883-10365923)
chr4 (116-152)||(15173224-15173260)
chr4 (116-152)||(17822786-17822822)
chr4 (108-152)||(17975258-17975302)
chr4 (104-152)||(19429391-19429439)
chr4 (104-152)||(28615435-28615483)
chr4 (104-152)||(32071964-32072012)
chr4 (116-152)||(42403944-42403980)
chr4 (104-152)||(44320050-44320098)
chr4 (104-156)||(47146045-47146097)
chr4 (116-152)||(49940088-49940124)
chr4 (104-148)||(54277248-54277292)
chr4 (104-152)||(55870263-55870311)
[»] chr1 (33 HSPs)
chr1 (104-153)||(29793618-29793667)
chr1 (106-155)||(5157175-5157224)
chr1 (104-152)||(4757439-4757487)
chr1 (104-152)||(6292593-6292641)
chr1 (104-159)||(33723296-33723351)
chr1 (106-151)||(10199330-10199375)
chr1 (103-148)||(15515656-15515701)
chr1 (104-156)||(9602571-9602623)
chr1 (122-154)||(18403126-18403158)
chr1 (104-152)||(24460322-24460370)
chr1 (104-152)||(48748516-48748564)
chr1 (108-151)||(2522701-2522744)
chr1 (104-147)||(25944542-25944585)
chr1 (105-148)||(32958739-32958782)
chr1 (106-157)||(51929378-51929429)
chr1 (104-158)||(3597196-3597250)
chr1 (104-142)||(43420359-43420397)
chr1 (107-151)||(6279503-6279547)
chr1 (104-152)||(6659781-6659829)
chr1 (104-152)||(7217995-7218043)
chr1 (104-152)||(15558312-15558360)
chr1 (104-152)||(15784897-15784945)
chr1 (110-154)||(18327065-18327109)
chr1 (104-148)||(28837278-28837322)
chr1 (113-153)||(30257794-30257834)
chr1 (112-152)||(30259407-30259447)
chr1 (104-152)||(33976279-33976327)
chr1 (104-152)||(34536259-34536307)
chr1 (104-148)||(35017683-35017727)
chr1 (116-152)||(41505787-41505823)
chr1 (104-152)||(44115826-44115874)
chr1 (116-160)||(48282235-48282279)
chr1 (104-152)||(52013988-52014036)
[»] chr7 (23 HSPs)
chr7 (107-155)||(32730166-32730214)
chr7 (105-151)||(529464-529510)
chr7 (110-152)||(47046029-47046071)
chr7 (115-152)||(30812250-30812287)
chr7 (106-158)||(3836598-3836650)
chr7 (104-156)||(8427114-8427166)
chr7 (104-152)||(47041960-47042008)
chr7 (105-152)||(1418521-1418568)
chr7 (116-155)||(9210934-9210973)
chr7 (107-152)||(5276594-5276639)
chr7 (107-152)||(7513663-7513708)
chr7 (116-157)||(19302479-19302520)
chr7 (113-150)||(46946017-46946054)
chr7 (116-152)||(11619079-11619115)
chr7 (104-156)||(12234806-12234858)
chr7 (104-152)||(23214956-23215004)
chr7 (104-152)||(29363609-29363657)
chr7 (110-162)||(31341242-31341294)
chr7 (116-152)||(33266407-33266443)
chr7 (116-152)||(33673190-33673226)
chr7 (109-153)||(33871347-33871391)
chr7 (104-152)||(40598406-40598454)
chr7 (104-156)||(44289960-44290012)
[»] chr3 (17 HSPs)
chr3 (104-156)||(22667504-22667556)
chr3 (104-156)||(22724143-22724195)
chr3 (104-152)||(20210849-20210897)
chr3 (104-152)||(21872216-21872264)
chr3 (117-152)||(26990146-26990181)
chr3 (108-155)||(41848634-41848681)
chr3 (105-152)||(51929843-51929890)
chr3 (116-158)||(16072956-16072998)
chr3 (106-152)||(31512486-31512532)
chr3 (116-153)||(26911704-26911741)
chr3 (104-149)||(33965412-33965457)
chr3 (104-152)||(20173811-20173859)
chr3 (106-154)||(24158435-24158483)
chr3 (116-152)||(25447166-25447202)
chr3 (104-152)||(32663739-32663787)
chr3 (104-152)||(37138383-37138431)
chr3 (104-152)||(44014719-44014767)
[»] chr2 (26 HSPs)
chr2 (104-152)||(13866979-13867027)
chr2 (104-152)||(22878199-22878247)
chr2 (108-157)||(43985314-43985363)
chr2 (108-148)||(3458700-3458740)
chr2 (104-152)||(15370244-15370292)
chr2 (104-156)||(28803447-28803499)
chr2 (104-152)||(40759261-40759309)
chr2 (112-152)||(40837358-40837398)
chr2 (104-152)||(41170711-41170759)
chr2 (105-152)||(18525162-18525209)
chr2 (105-152)||(28810373-28810420)
chr2 (104-155)||(40158819-40158870)
chr2 (107-141)||(29430862-29430896)
chr2 (107-152)||(1830143-1830188)
chr2 (107-152)||(8017538-8017583)
chr2 (104-153)||(21616580-21616629)
chr2 (103-152)||(26372648-26372697)
chr2 (115-148)||(41516949-41516982)
chr2 (108-152)||(3078529-3078573)
chr2 (116-152)||(18179062-18179098)
chr2 (116-152)||(27317492-27317528)
chr2 (116-152)||(30331864-30331900)
chr2 (104-152)||(35329739-35329787)
chr2 (116-152)||(40059382-40059418)
chr2 (116-152)||(40085282-40085318)
chr2 (104-152)||(40851699-40851747)
[»] chr8 (29 HSPs)
chr8 (105-152)||(4560604-4560651)
chr8 (103-150)||(10560147-10560194)
chr8 (108-173)||(34290974-34291039)
chr8 (108-156)||(1821934-1821982)
chr8 (108-156)||(1856379-1856427)
chr8 (104-152)||(7714343-7714391)
chr8 (104-152)||(9700102-9700150)
chr8 (104-152)||(18331815-18331863)
chr8 (106-154)||(22705031-22705079)
chr8 (116-152)||(38602440-38602476)
chr8 (106-152)||(2606152-2606198)
chr8 (110-152)||(8060775-8060817)
chr8 (104-158)||(43368615-43368669)
chr8 (104-153)||(1561378-1561427)
chr8 (104-149)||(6950423-6950468)
chr8 (104-148)||(1892149-1892193)
chr8 (104-152)||(2487929-2487977)
chr8 (104-152)||(7008699-7008747)
chr8 (104-152)||(10488564-10488612)
chr8 (104-152)||(14926903-14926951)
chr8 (104-152)||(16162861-16162909)
chr8 (104-156)||(20186381-20186433)
chr8 (104-156)||(20205448-20205500)
chr8 (110-158)||(29168776-29168824)
chr8 (116-152)||(30251375-30251411)
chr8 (108-152)||(32976478-32976522)
chr8 (104-148)||(39881646-39881690)
chr8 (104-156)||(43393689-43393741)
chr8 (116-156)||(43717851-43717891)
[»] chr6 (16 HSPs)
chr6 (106-152)||(13908343-13908389)
chr6 (106-152)||(31776193-31776239)
chr6 (104-152)||(8420117-8420166)
chr6 (104-156)||(12111068-12111120)
chr6 (104-147)||(6742912-6742955)
chr6 (104-147)||(7351597-7351640)
chr6 (104-158)||(2732160-2732216)
chr6 (106-151)||(17241082-17241127)
chr6 (104-153)||(26559159-26559208)
chr6 (104-152)||(738462-738510)
chr6 (106-142)||(3750100-3750136)
chr6 (104-152)||(4325226-4325274)
chr6 (104-152)||(8010458-8010506)
chr6 (104-152)||(10016724-10016772)
chr6 (116-152)||(20861619-20861655)
chr6 (116-152)||(21405075-21405111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (106-152)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 578; Significance: 0; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 16 - 625
Target Start/End: Complemental strand, 14706341 - 14705732
Alignment:
Q  16 attatactgttttcgtaagttatccctatgagtttatggagataattaagttgaaaagagcttatacaactctccaaatagtttcacttctcacaagtgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  14706341 attatactgttttcgtaagttatccctatgagtttatggagataattaagttgaaaagagcttatacaactcttcaaatagtttcacatctcacaagtgt 14706242  T
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatttgttttgggtgccattattttgtagtaattggtctccggaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706241 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatttgttttgggtgccattattttgtagtaattggtctccggaat 14706142  T
Q  216 gctttggctatgaccataattttgtatccaatttcttcttgtagtagcatgattatatttgtttgaatgttgatgttttccttaaaattgcacttttgtg 315  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14706141 gctttggctatgaccataattttgtattcaatttcgtcttgtagtagcatgattatatttgtttcaatgttgatgttttccttaaaattgcacttttgtg 14706042  T
Q  316 tagtatatgactatatgttgtggatgagcacggtaacttgaagcagttttaagattaaacaatgatcataatttatgaatttgtttgcttttagcttaac 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14706041 tagtatatgactatatgttgtggatgagcacggtaacttgaagcagttttaagattaaacaatgatcataatttatgaatttgtttgcttttggcttaac 14705942  T
Q  416 tttttaagaagtgattatatataataatgatatagtcgtgtatatactagatttctcaacagcatttcagtgtttatctcatggcaaattttagtttaaa 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14705941 tttttaagaagtgattatatataataatgatatagtcgtgtatatactagatttctcaacagcatttcagtgtttatctcatggcaaattttagtttaaa 14705842  T
Q  516 gtttatgacactgtagtacaacgtaatgaggtggatggattgcagagatgcactggattctttagggctggttcgatattgctgcaggcgcatgcttatg 615  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14705841 gtttataacactgtagtacaaagtaatgaggtggatggattgcagagatgcactggattctttagggctggttcgatattgctgcaggcgcatgcttatg 14705742  T
Q  616 acccatgttg 625  Q
    ||||||||||    
T  14705741 acccatgttg 14705732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 625
Target Start/End: Complemental strand, 14713937 - 14713857
Alignment:
Q  545 ggtggatggattgcagagatgcactggattctttagggctggttcgatattgctgcaggcgcatgcttatgacccatgttg 625  Q
    ||||||| ||||  ||||||||||||||| |||| ||| |||| ||||||||||||||||| |||||||||||||||||||    
T  14713937 ggtggattgattatagagatgcactggatgctttggggttggtccgatattgctgcaggcgtatgcttatgacccatgttg 14713857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 36796676 - 36796628
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  36796676 tctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaa 36796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 499688 - 499652
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||||||||||||||||||||    
T  499688 ttatgtcagtaggtaagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 10771857 - 10771806
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    ||||||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  10771857 tctcacaagtgcttatgccagtagataagctcaaataagccaatccaaatag 10771806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 11615619 - 11615572
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaatag 11615572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 19177546 - 19177597
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    ||||||||||||| ||| || ||||||| |||||||||||||||||||||||    
T  19177546 tctcacaagtgttcatgccaataggtaaactcaaataagtcaatccaaatag 19177597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 17369306 - 17369352
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||    
T  17369306 tcacaagtgattatgtcagtagataagttcaaataagtcaatccaaa 17369352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 27153305 - 27153259
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 154  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||    
T  27153305 acaagtgtttttgccagtaggtaagctcaaagaagtcaatccaaata 27153259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 13508541 - 13508589
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| |||||    
T  13508541 tctcacaagtgtttatgccagtagataagttcaaataagtcaagccaaa 13508589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31723906 - 31723958
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||| |||||||||||  ||||  ||||||||||||||||||||||||||||    
T  31723906 tctcataagtgtttatgctagtacataagctcaaataagtcaatccaaatagg 31723958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 20982179 - 20982133
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||| | |||||| |||||||||||||| |||||||||    
T  20982179 tcacaagtgtttacgacagtagataagctcaaataagccaatccaaa 20982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 34198524 - 34198570
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  34198524 tcacaagtgtttatgttagtaaataaactcaaataagtcaatccaaa 34198570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 42034167 - 42034209
Alignment:
Q  110 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||| |||||||||||||||||||||||||||  ||||||||    
T  42034167 aagtgcttatgtcagtaggtaagctcaaataagctaatccaaa 42034209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 14331474 - 14331515
Alignment:
Q  111 agtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||| ||||| |||||| ||||||||||||||||||||||||    
T  14331474 agtgcttatgacagtagataagctcaaataagtcaatccaaa 14331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 14714810 - 14714683
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata-ggtctttagtttcacaa---tttgttttgggtgccattattttgtagt-a 200  Q
    ||||||||| |||||||||| | ||||||||||| || |||| |||| | |  ||||||||||||||   ||| |||| |||||||||||||| || | |    
T  14714810 tcacaagtgcttatgtcagtggataagctcaaatgagccaattcaaacatgccctttagtttcacaactttttttttttggtgccattattttttactaa 14714711  T
Q  201 attggtctccggaatgctttggctatga 228  Q
    ||| || ||||| || ||||||||||||    
T  14714710 atttgtttccggcatactttggctatga 14714683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 40335842 - 40335785
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttt 161  Q
    |||||||||||||| ||  ||||| ||| |||||||||||||||||||| ||| ||||    
T  40335842 tctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaacaggccttt 40335785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 41419431 - 41419468
Alignment:
Q  115 tttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41419431 tttatgtcagtagattagctcaaataagtcaatccaaa 41419468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 41534550 - 41534587
Alignment:
Q  115 tttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41534550 tttatgtcagtagattagctcaaataagtcaatccaaa 41534587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 4855796 - 4855840
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||||||||||||| |||| ||  ||||||||||||||||||||    
T  4855796 tctcacaagtgtttaagtcattatataagctcaaataagtcaatc 4855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 14932413 - 14932445
Alignment:
Q  120 gtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| ||||||||||||||||||||||||    
T  14932413 gtcagtagataagctcaaataagtcaatccaaa 14932445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 28578954 - 28578994
Alignment:
Q  112 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  28578954 gtgtttttgtcagtagataagctcaaataagtcaattcaaa 28578994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 32194061 - 32194013
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||  |||| ||| ||| ||||||||||||||||||||||||    
T  32194061 tctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 32194013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 33961784 - 33961836
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||| ||||| ||||||| |||| ||||||||||||| ||||| ||||||||    
T  33961784 tctcataagtgcttatgtccgtagataagctcaaataattcaattcaaatagg 33961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 35135619 - 35135567
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 158  Q
    ||||||||| ||||||||||||  ||||| |||||||| |||||||| |||||    
T  35135619 tcacaagtggttatgtcagtagagaagctgaaataagttaatccaaacaggtc 35135567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 37968980 - 37969035
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttta 162  Q
    ||||||||  |||||||||||| |||||||||| ||||| ||||| |||||||||||    
T  37968980 tcacaagtacttatgtcagtagataagctcaaacaagtc-atccagataggtcttta 37969035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 39594920 - 39594956
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  39594920 ttatgtcggtagataagctcaaataagtcaatccaaa 39594956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 545 - 625
Target Start/End: Complemental strand, 28889755 - 28889675
Alignment:
Q  545 ggtggatggattgcagagatgcactggattctttagggctggttcgatattgctgcaggcgcatgcttatgacccatgttg 625  Q
    |||| |||||||||||||||||||||||| | || || |||||||| ||||| ||||||||||||||||||||||||||||    
T  28889755 ggtgtatggattgcagagatgcactggatgcgttgggtctggttcggtattgttgcaggcgcatgcttatgacccatgttg 28889675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 1017129 - 1017176
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  1017129 tctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 24193618 - 24193681
Alignment:
Q  89 ccaaatagtttcacttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||| ||||  |||||||||||||||| ||| || ||||||||||||||||||||||||    
T  24193618 ccaaatagtctcacaactcacaagtgtttatgccaggagataagctcaaataagtcaatccaaa 24193681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 32421027 - 32420976
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  32421027 tctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaatag 32420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 18628522 - 18628472
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 154  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  18628522 tctcacaagtgtttatgtcagtagataagctcaaatacgtcaatctaaata 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 18512484 - 18512440
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  18512484 tctcacaagtgtttatgtcagtagataagctcaaataagttaatc 18512440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 27043787 - 27043751
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27043787 ttatgtcagtagataagctcaaataagtcaatccaaa 27043751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 56186867 - 56186803
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttca 168  Q
    |||||||||||||||||| ||||| ||| ||| ||||||| |||||||| | || ||||||||||    
T  56186867 tctcacaagtgtttatgttagtagataaactcgaataagttaatccaaacaagtgtttagtttca 56186803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 22845674 - 22845620
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtct 159  Q
    ||||||||||  |||||| ||||| |||||||||||||| ||||||||||||||||    
T  22845674 tctcacaagtacttatgt-agtagataagctcaaataagccaatccaaataggtct 22845620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 1075561 - 1075607
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||| |||||| |||||||||||||| |||| ||||    
T  1075561 tcacaagtgtttatgccagtagataagctcaaataagccaattcaaa 1075607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 19305027 - 19305077
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 154  Q
    |||||||| || |||||||| ||| ||| ||||||||||||||||||||||    
T  19305027 tctcacaaatgcttatgtcaatagataatctcaaataagtcaatccaaata 19305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 28259376 - 28259422
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  28259376 tcacaagtgcttatgtcagttgataagctcaaataagtcagtccaaa 28259422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 7368023 - 7367975
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||| ||||||| | |||| ||| ||||||||||||||||||||    
T  7368023 tctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaa 7367975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 8420908 - 8420948
Alignment:
Q  116 ttatgtcagtaggtaagctcaaa-taagtcaatccaaatag 155  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  8420908 ttatgtcagtagataagctcaaactaagtcaatccaaatag 8420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 10365883 - 10365923
Alignment:
Q  111 agtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  10365883 agtgtttatgtcagtagataagattaaataagtcaatccaa 10365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 15173260 - 15173224
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| |||| |||||||||||||||||||    
T  15173260 ttatgtcagtagataagttcaaataagtcaatccaaa 15173224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 17822822 - 17822786
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  17822822 ttatgtcagtagataagctcaaataagttaatccaaa 17822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 17975302 - 17975258
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||    
T  17975302 acaagtgtttgtgttggtagataagctcaaataagtcaatccaaa 17975258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 19429439 - 19429391
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||  |||||  |||||||||||||| |||||||||    
T  19429439 tctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 28615435 - 28615483
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||  ||||| ||| || |||||||||||||||||    
T  28615435 tctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaa 28615483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 32071964 - 32072012
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||||| ||| ||| ||||||||||||| ||||||    
T  32071964 tctcacaagtgcttatgtcaatagataaactcaaataagtcagtccaaa 32072012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 42403980 - 42403944
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||| | ||||||||||||||||||||||||    
T  42403980 ttatgtcagttgataagctcaaataagtcaatccaaa 42403944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 44320050 - 44320098
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| |||||||| || |||||||||||||||||  |||||||||    
T  44320050 tctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaa 44320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47146045 - 47146097
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||| ||||| || ||  |||| |||||||||||||||||||||||    
T  47146045 tctcacaagtgcttatgccaatatataagttcaaataagtcaatccaaatagg 47146097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 49940124 - 49940088
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||| || |||||||||||||||||||||||||||    
T  49940124 ttatgttagcaggtaagctcaaataagtcaatccaaa 49940088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 54277292 - 54277248
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||    
T  54277292 tctcataagtgtttatgtcactagataagttcaaataagtcaatc 54277248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 55870311 - 55870263
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  55870311 tctcacaaatgtttatgtcattagataaactcaaataagttaatccaaa 55870263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 29793667 - 29793618
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29793667 tctcacaagtgtttatgtcagtagataagctcaaataagtcaatacaaat 29793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 5157175 - 5157224
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  5157175 tcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaatag 5157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 4757439 - 4757487
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  4757439 tctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 6292593 - 6292641
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  6292593 tctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 33723351 - 33723296
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtct 159  Q
    |||||||||||||||||  ||||| |||| ||||||||||||||||||| ||||||    
T  33723351 tctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaacaggtct 33723296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 10199375 - 10199330
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  10199375 tcacaagtgcttatgttagtagataagctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 15515656 - 15515701
Alignment:
Q  103 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  15515656 ttctcacacgtgtttatgccagtagataagctcaaataagtcaatc 15515701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9602623 - 9602571
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||| ||| || ||||| |||||||| |||||||||||||||||||    
T  9602623 tctcacaagtgcttaagttagtagataagctcagataagtcaatccaaatagg 9602571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 18403158 - 18403126
Alignment:
Q  122 cagtaggtaagctcaaataagtcaatccaaata 154  Q
    |||||||||||||||||||||||||||||||||    
T  18403158 cagtaggtaagctcaaataagtcaatccaaata 18403126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 24460370 - 24460322
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| | |||||||||| |||| |||||||||||||||||||    
T  24460370 tctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaa 24460322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 48748564 - 48748516
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||| | | ||||||||||||||||||| ||||    
T  48748564 tctcacaagtgtttatgtcaatggataagctcaaataagtcaattcaaa 48748516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 2522701 - 2522744
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||    
T  2522701 acaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 25944542 - 25944585
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 147  Q
    |||||||||||||||||||||||  ||||| |||||||||||||    
T  25944542 tctcacaagtgtttatgtcagtaaataagcgcaaataagtcaat 25944585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 32958739 - 32958782
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||    
T  32958739 ctcacaagtgcttatgacagtagataagctcaaataagtcaatc 32958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 51929429 - 51929378
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggt 157  Q
    ||||| ||| |||||||||||| |||||||||| ||||||||||||| ||||    
T  51929429 tcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaagaggt 51929378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 3597250 - 3597196
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 158  Q
    ||||||||||| |||| ||| ||| ||| |||||||||||||||||||| |||||    
T  3597250 tctcacaagtggttatatcattagataacctcaaataagtcaatccaaacaggtc 3597196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 43420359 - 43420397
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataag 142  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  43420359 tctcacaagtgtttatgtctgtagataagctcaaataag 43420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 6279503 - 6279547
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    |||||||| |||||||||||| |||||| |||||||||| |||||    
T  6279503 cacaagtgcttatgtcagtagttaagctgaaataagtcactccaa 6279547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 6659781 - 6659829
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||  ||||| |||||| |||||||||||||||||    
T  6659781 tctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaa 6659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 7218043 - 7217995
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||| ||||||||||| | |||| |||||| |||||||||||||||||    
T  7218043 tctcagaagtgtttatgccggtagataagcttaaataagtcaatccaaa 7217995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 15558312 - 15558360
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||| | |||| | ||||||||||||| ||||||||||    
T  15558312 tctcacaagtgtttaagccagtcgataagctcaaataactcaatccaaa 15558360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 15784897 - 15784945
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||| ||||| |||||| |||||  ||||||||||||||||||||||||    
T  15784897 tctcgcaagtttttatgacagtaaataagctcaaataagtcaatccaaa 15784945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 18327109 - 18327065
Alignment:
Q  110 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 154  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||||    
T  18327109 aagtgcttatgacagtagataagctcaaataagccaatccaaata 18327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 28837322 - 28837278
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    |||| |||||| |||||||||||| |||||||||||||| |||||    
T  28837322 tctctcaagtgcttatgtcagtagataagctcaaataagccaatc 28837278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 30257794 - 30257834
Alignment:
Q  113 tgtttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  30257794 tgtttatgtcagtagataaactcaaataagtaaatccaaat 30257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 30259447 - 30259407
Alignment:
Q  112 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  30259447 gtgtttatgccggtaggtaaactcaaataagtcaatccaaa 30259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 33976279 - 33976327
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| | |||||| ||  ||||||||||||||||||||||||    
T  33976279 tctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaa 33976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 34536259 - 34536307
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||| ||| || | |||||||||||| ||||||    
T  34536259 tctcacaagtgtttatgtcaatagatacgttcaaataagtcattccaaa 34536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 35017683 - 35017727
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||||||||||||||| || ||| |||||||||||||| |||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataagccaatc 35017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 41505787 - 41505823
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| |||||||||||||| |||||||||    
T  41505787 ttatgtcagtagataagctcaaataagccaatccaaa 41505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 44115874 - 44115826
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||  ||| || ||||||||| ||||||||||||||||||||    
T  44115874 tctcacaagtacttaagtgagtaggtaaactcaaataagtcaatccaaa 44115826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 48282235 - 48282279
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctt 160  Q
    ||||| |||||||||||||||||| |||||| ||||| |||||||    
T  48282235 ttatgccagtaggtaagctcaaattagtcaacccaaacaggtctt 48282279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 52013988 - 52014036
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||| ||||||||| || ||| ||||||||||||||| ||||||||    
T  52013988 tctcacacgtgtttatgccaatagataagctcaaataagttaatccaaa 52014036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 32730214 - 32730166
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  32730214 cacaaatgtttatgtcagtaggtaagctcaaataagtcaatcgaaatag 32730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 529464 - 529510
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  529464 ctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 47046071 - 47046029
Alignment:
Q  110 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046071 aagtgtttatgtcagtagataagcacaaataagtcaatccaaa 47046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 30812250 - 30812287
Alignment:
Q  115 tttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  30812250 tttatgtcagtaggtaaactcaaataagtcaatccaaa 30812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 3836650 - 3836598
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 158  Q
    ||||||||| ||| | |||||| |||||||||||||| |||||||||||||||    
T  3836650 tcacaagtgcttaagccagtagataagctcaaataaggcaatccaaataggtc 3836598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 8427114 - 8427166
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||  |||||| ||||| ||||||||||||| ||||||||||||||    
T  8427114 tctcacaagtacttatgttagtagataagctcaaataaatcaatccaaatagg 8427166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 47042008 - 47041960
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||| |||||| ||| || |||||||||||||||||||||    
T  47042008 tctcacaagtgttaatgtcaatagatatgctcaaataagtcaatccaaa 47041960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 1418521 - 1418568
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||| ||||| ||||| |||||| ||||||||||||||||||||||||    
T  1418521 ctcataagtgcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 9210934 - 9210973
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  9210934 ttatatcagtagataagctcaaataagtcaatccaaatag 9210973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 5276594 - 5276639
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  5276594 cacaagtgtttatgttagtagataagctcatctaagtcaatccaaa 5276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 7513663 - 7513708
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| ||||| |||||| ||||||||||||||||||| ||||    
T  7513663 cacaagtgcttatgccagtagataagctcaaataagtcaattcaaa 7513708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 19302520 - 19302479
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaataggt 157  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  19302520 ttatgtcagtagataagctcaaataagtcaattcaaacaggt 19302479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 46946017 - 46946054
Alignment:
Q  113 tgtttatgtcagtaggtaagctcaaataagtcaatcca 150  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  46946017 tgtttatgccagtagctaagctcaaataagtcaatcca 46946054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 11619115 - 11619079
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| |||||||||||||| |||||||||    
T  11619115 ttatgtcagtagataagctcaaataagccaatccaaa 11619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12234858 - 12234806
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||| ||| | ||| |||||| ||||||||| ||||||||||||||||||    
T  12234858 tctcacacgtgctaatgccagtagataagctcaactaagtcaatccaaatagg 12234806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 23214956 - 23215004
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||| |||||||||||  ||||| |||| |||||||||||||||||||    
T  23214956 tctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaa 23215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 29363609 - 29363657
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||| ||||| |||| ||||||||| |||||||||    
T  29363609 tctcacaagtgcttatgttagtagataagttcaaataagccaatccaaa 29363657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 31341242 - 31341294
Alignment:
Q  110 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttta 162  Q
    |||||||||||  |||||  ||||||||||||||||||||||| | |||||||    
T  31341242 aagtgtttatgcaagtagaaaagctcaaataagtcaatccaaacatgtcttta 31341294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 33266443 - 33266407
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  33266443 ttatgtcggtagataagctcaaataagtcaatccaaa 33266407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 33673190 - 33673226
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33673190 ttatgtcagtagataagctcaaatgagtcaatccaaa 33673226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 33871347 - 33871391
Alignment:
Q  109 caagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    ||||||||||||| ||||| |||||||||| ||||||||| ||||    
T  33871347 caagtgtttatgtaagtagataagctcaaaaaagtcaatcaaaat 33871391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 40598454 - 40598406
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||| |||||||| |||  ||||| ||||||||||||||||||||||||    
T  40598454 tctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaa 40598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 44290012 - 44289960
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  44290012 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 44289960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22667504 - 22667556
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  22667504 tctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatagg 22667556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22724143 - 22724195
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  22724143 tctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatagg 22724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 20210897 - 20210849
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  20210897 tctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaa 20210849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 21872264 - 21872216
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||||||||| |||| |||||||||| ||||||||    
T  21872264 tctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaa 21872216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 152
Target Start/End: Complemental strand, 26990181 - 26990146
Alignment:
Q  117 tatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26990181 tatgtcagtagataagctcaaataagtcaatccaaa 26990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 41848681 - 41848634
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    |||||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  41848681 acaagtgtttatgttagtagataaactcaaataagtcaatctaaatag 41848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 51929843 - 51929890
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||  | ||| ||||||||||||||||||||||||    
T  51929843 ctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaa 51929890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 16072998 - 16072956
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 158  Q
    |||||||| ||| |||||||||||||||||||||||| |||||    
T  16072998 ttatgtcattagataagctcaaataagtcaatccaaacaggtc 16072956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 31512486 - 31512532
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||  |||||||||||||||| |||||||||||||    
T  31512486 tcacaagtgttcatgctagtaggtaagctcaaacaagtcaatccaaa 31512532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 26911704 - 26911741
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  26911704 ttatgtcagtagataaactcaaataagtcaatccaaat 26911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 33965457 - 33965412
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcc 149  Q
    ||||||| ||||||| |||||||| |||||||||||| ||||||||    
T  33965457 tctcacatgtgtttaagtcagtagataagctcaaatatgtcaatcc 33965412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 20173859 - 20173811
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||| ||| ||| || |||||||||||||||||||||    
T  20173859 tctcacaagtgcttatttcaatagatacgctcaaataagtcaatccaaa 20173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 24158483 - 24158435
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 154  Q
    ||||||||  |||||||||||| |||||| ||||||| |||||||||||    
T  24158483 tcacaagtacttatgtcagtagataagcttaaataagccaatccaaata 24158435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 25447202 - 25447166
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  25447202 ttatgtcagtagataaactcaaataagtcaatccaaa 25447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 32663739 - 32663787
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| | |||| |||| |||||||||||||| |||||||||    
T  32663739 tctcacaagtgtatttgtcggtagataagctcaaataagccaatccaaa 32663787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 37138383 - 37138431
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||||||| |||  || |||||| |||||||||    
T  37138383 tctcacaagtgtttatgtcagtagataaattctaataagccaatccaaa 37138431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 44014767 - 44014719
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  44014767 tctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 44014719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 13866979 - 13867027
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  13866979 tctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaa 13867027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 22878199 - 22878247
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  22878199 tctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 43985314 - 43985363
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggt 157  Q
    |||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  43985314 acaagtgtttatgtcagtagataaacttaaataagtcgatccaaataggt 43985363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 3458700 - 3458740
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  3458700 acaagtgtttatgccagtaagtaagctcaaataagtcaatc 3458740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 15370292 - 15370244
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| || ||||| |||||| ||||||||||||||||||||||||    
T  15370292 tctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaa 15370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 28803499 - 28803447
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||| ||| ||||| | |||| ||||||||||||||||||||||||||||    
T  28803499 tctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaatagg 28803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 40759261 - 40759309
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  40759261 tctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaa 40759309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 40837398 - 40837358
Alignment:
Q  112 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  40837398 gtgtttatgtcagtagataagctcaaataagccaatccaaa 40837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 41170711 - 41170759
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  41170711 tctcacaagtgtttatgttagtagataaactcaaataagccaatccaaa 41170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 18525209 - 18525162
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  18525209 ctcacgagtgtttatgtctgtagataagctcaaataagtcaattcaaa 18525162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 28810420 - 28810373
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||| || |||  |||||||||||||||||||||||    
T  28810420 ctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaa 28810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 40158819 - 40158870
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 155  Q
    ||||||||||  |||||||||||| || ||||||||||| ||||||||||||    
T  40158819 tctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaatag 40158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 29430862 - 29430896
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataa 141  Q
    ||||||||||||||||||||| |||||||||||||    
T  29430862 cacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 1830143 - 1830188
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| |||||||||||  ||| ||||||||||||||||||||    
T  1830143 cacaagtgcttatgtcagtaaataaactcaaataagtcaatccaaa 1830188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 8017538 - 8017583
Alignment:
Q  107 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| |||||||| ||| ||| ||||||||||||||||||||    
T  8017538 cacaagtgcttatgtcaatagataacctcaaataagtcaatccaaa 8017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 21616629 - 21616580
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    |||||||| ||||||||||||| | ||| || ||||||||||||||||||    
T  21616629 tctcacaaatgtttatgtcagtggataaactgaaataagtcaatccaaat 21616580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 26372697 - 26372648
Alignment:
Q  103 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||| || ||||||||| || ||||||||||| ||||||||||||    
T  26372697 ttctcacaaatgcttatgtcagaagataagctcaaatgagtcaatccaaa 26372648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 41516982 - 41516949
Alignment:
Q  115 tttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||||| ||||||||||||||||||||||||||    
T  41516982 tttatgtgagtaggtaagctcaaataagtcaatc 41516949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 3078573 - 3078529
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||    
T  3078573 acaagtgtttgtgttggtagataagctcaaataagtcaatccaaa 3078529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 18179062 - 18179098
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  18179062 ttatgttagtagataagctcaaataagtcaatccaaa 18179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 27317492 - 27317528
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  27317492 ttatgtcggtagataagctcaaataagtcaatccaaa 27317528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 30331864 - 30331900
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| |||||| |||||||||||||||||    
T  30331864 ttatgtcagtagataagctgaaataagtcaatccaaa 30331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 35329787 - 35329739
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||| ||||||||||  ||||| |||||||| |||||||||||||||    
T  35329787 tctcactagtgtttatggtagtagataagctcacataagtcaatccaaa 35329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 40059418 - 40059382
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaa 40059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 40085318 - 40085282
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaa 40085282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 40851699 - 40851747
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| |||||||||||| |  ||||| ||||||||||||||||||    
T  40851699 tctcacaattgtttatgtcagcaattaagcgcaaataagtcaatccaaa 40851747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 4560604 - 4560651
Alignment:
Q  105 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  4560604 ctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 10560147 - 10560194
Alignment:
Q  103 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcca 150  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  10560147 ttctcacaaatgtttatgtcagtagataagctcaactaagtcaatcca 10560194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 34290974 - 34291039
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatt 173  Q
    |||||||||||||||||||| | | |||||| ||||||||| ||||||| || |||||||| ||||    
T  34290974 acaagtgtttatgtcagtagatgaactcaaacaagtcaatcgaaataggcctctagtttcaaaatt 34291039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 1821934 - 1821982
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1821934 acaagtgtttatgtcggtatctaagctcaaataagtcaattcaaatagg 1821982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 1856379 - 1856427
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1856379 acaagtgtttatgtcggtatctaagctcaaataagtcaattcaaatagg 1856427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 7714343 - 7714391
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||| || ||  ||||||||||||||||||||||||    
T  7714343 tctcacaagtgtttatgacattatataagctcaaataagtcaatccaaa 7714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 9700102 - 9700150
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  9700102 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 18331815 - 18331863
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||| ||||| |||| |||||||||||||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaa 18331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 22705079 - 22705031
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 154  Q
    |||||||||||||||| | |||||||||||||||||| |||| ||||||    
T  22705079 tcacaagtgtttatgttaataggtaagctcaaataagccaattcaaata 22705031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 38602440 - 38602476
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38602440 ttatgtcagtagataagctcaaataagtcaatccaaa 38602476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 2606152 - 2606198
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||| |||| |||||||||||| ||||||| ||||||||||||||||    
T  2606152 tcactagtgattatgtcagtagataagctcgaataagtcaatccaaa 2606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 8060775 - 8060817
Alignment:
Q  110 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  8060775 aagtgtttatgtcaatagatatgctcaaataagtcaatccaaa 8060817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 43368669 - 43368615
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 158  Q
    |||||||| || |||||| ||||| |||| ||||||||||||||||||| |||||    
T  43368669 tctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaacaggtc 43368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 1561378 - 1561427
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    ||||||||||||||||| || ||| |||| |||||||| |||||||||||    
T  1561378 tctcacaagtgtttatgccattagataagatcaaataaatcaatccaaat 1561427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 6950423 - 6950468
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcc 149  Q
    |||||||| |||||||| |||||| ||| |||||||||||||||||    
T  6950423 tctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 1892193 - 1892149
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||||||||||||||| | |||| ||| ||||||||||||||||    
T  1892193 tctcacaagtgtttatgacggtagataaactcaaataagtcaatc 1892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 2487977 - 2487929
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| |||||||||||| | | |||||||||| |||||||||    
T  2487977 tctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaa 2487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 7008699 - 7008747
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| ||||| |||||| ||| ||||||||||||||| ||||    
T  7008699 tctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaa 7008747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 10488564 - 10488612
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||| |||||||||| ||| | |||||||||||||| |||||||||    
T  10488564 tctcacatgtgtttatgttagttgataagctcaaataagccaatccaaa 10488612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 14926951 - 14926903
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||| ||||| |||||  |||| |||||||||||||||||||    
T  14926951 tctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaa 14926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 16162861 - 16162909
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  16162861 tctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 16162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20186433 - 20186381
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  20186433 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 20186381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 20205500 - 20205448
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  20205500 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 20205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 29168824 - 29168776
Alignment:
Q  110 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 158  Q
    ||||| |||||  ||||||||||||||||| ||||||| ||||||||||    
T  29168824 aagtgcttatgctagtaggtaagctcaaatcagtcaatacaaataggtc 29168776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 30251411 - 30251375
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||| |||||||||||||| |||||||||    
T  30251411 ttatgtcagtagataagctcaaataagccaatccaaa 30251375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 32976478 - 32976522
Alignment:
Q  108 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||| |||||||||||| ||||||||||||||  ||||||||    
T  32976478 acaagtgcttatgtcagtagataagctcaaataagggaatccaaa 32976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 39881690 - 39881646
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 148  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||    
T  39881690 tctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 43393741 - 43393689
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    ||||| |||||||| ||  ||||| |||||| |||||||||||||||||||||    
T  43393741 tctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaatagg 43393689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 43717891 - 43717851
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    |||||||| ||| |||||||||||||| |||||||||||||    
T  43717891 ttatgtcaatagataagctcaaataagccaatccaaatagg 43717851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 13908343 - 13908389
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  13908343 tcacaagtgtttatgtcagtagataagttcaaataagtcaattcaaa 13908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 31776239 - 31776193
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  31776239 tcacaagtgtatatatcagtagataagctcaaataagtcaatccaaa 31776193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 8420166 - 8420117
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaat-aagtcaatccaaa 152  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  8420166 tctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaa 8420117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 12111068 - 12111120
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 156  Q
    |||| |||||| |||||  ||||| ||||||||||||||||||||||||||||    
T  12111068 tctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaatagg 12111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 6742912 - 6742955
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 147  Q
    ||||||||||| |||||  |||||||||||||||||||||||||    
T  6742912 tctcacaagtgattatgctagtaggtaagctcaaataagtcaat 6742955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 7351640 - 7351597
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 147  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  7351640 tctcacaagtgcttatgtcagtagataaactcaaataagtcaat 7351597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 2732216 - 2732160
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctc--aaataagtcaatccaaataggtc 158  Q
    ||||||||||| ||||||||||||  ||||||  |||||||||||||| ||||||||    
T  2732216 tctcacaagtgcttatgtcagtagacaagctctcaaataagtcaatcccaataggtc 2732160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 17241127 - 17241082
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 151  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||    
T  17241127 tcacaagtgtttatgtcagtatataaactcaaataagtaaatccaa 17241082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 26559208 - 26559159
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 153  Q
    |||||||| || ||||| |||||||||| ||||||||||| |||||||||    
T  26559208 tctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaat 26559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 738510 - 738462
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| ||||||| ||| ||| ||||||||||||||| ||||||||    
T  738510 tctcacaaatgtttatctcaatagataagctcaaataagttaatccaaa 738462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 3750100 - 3750136
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataag 142  Q
    |||||||||||||||||||||| |||||||| |||||    
T  3750100 tcacaagtgtttatgtcagtagataagctcagataag 3750136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 4325274 - 4325226
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||||||| ||||| ||| || |||| ||||||||||||    
T  4325274 tctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaa 4325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 8010458 - 8010506
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||| |||||||| || ||| |||||||| |||||||||||||||    
T  8010458 tctcacaaatgtttatgccaatagataagctcacataagtcaatccaaa 8010506  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 10016724 - 10016772
Alignment:
Q  104 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||||||||||||||| | |||| |||||||||||||  |||||||||    
T  10016724 tctcacaagtgtttatgcctgtagataagctcaaataaaccaatccaaa 10016772  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 20861655 - 20861619
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  20861655 ttatgccagtaggtaagctcaaataagacaatccaaa 20861619  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 21405111 - 21405075
Alignment:
Q  116 ttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21405111 ttatgtcagtatataagctcaaataagtcaatccaaa 21405075  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 159940 - 159894
Alignment:
Q  106 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 152  Q
    |||||||||||||| | ||||| |||||||||||||| |||||||||    
T  159940 tcacaagtgtttatattagtagataagctcaaataagccaatccaaa 159894  T

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