View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4592-Insertion-6 (Length: 414)
Name: NF4592-Insertion-6
Description: NF4592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4592-Insertion-6 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 7 - 258
Target Start/End: Original strand, 7640063 - 7640312
Alignment:
| Q |
7 |
agttagaatgccaagactagtttattgagcatagacgacattgtgaatggaatcagtttatatatagatattattgcaaattttgcttccctgaagtcga |
106 |
Q |
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| T |
7640063 |
agttagaatgccaagactagtttattgagcatagacgacattgtgaatggaatcagtttatatatagatattattgcaaattttgtttccctgaagtcga |
7640162 |
T |
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| Q |
107 |
attctttaccatgtagtgagattttatagaaaataagcttgaagtttgtagaagtgtatatttttaagcatgcatatgaggtgtaggaaatgtttgtgta |
206 |
Q |
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| T |
7640163 |
attctt--ccatgtagtgagattttatagaaaataagcttgaagtttgtagaagtgtatatttttaagcatgcatatgaagtgtaggaaatgtttgtgta |
7640260 |
T |
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| Q |
207 |
gtttgatnnnnnnntccatttgccttttagaggataaagcaagatcaactgc |
258 |
Q |
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| T |
7640261 |
gtttgagaaaaaaatccatttgccatttagaggataaagcaagataaactgc |
7640312 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 7633307 - 7633379
Alignment:
| Q |
7 |
agttagaatgccaagactagtttattgagcatagacgacattgtgaatggaatcagtttatatatagatattattg |
82 |
Q |
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| T |
7633307 |
agttggaatgccaatactagtttatggagcatacac---attctgaatggattcagtttatatatagatattattg |
7633379 |
T |
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