View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4592-Insertion-8 (Length: 332)
Name: NF4592-Insertion-8
Description: NF4592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4592-Insertion-8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 8 - 332
Target Start/End: Complemental strand, 3139125 - 3138802
Alignment:
| Q |
8 |
ctttgatcccaacttccaaatctcctttcttcccttaacaacacaacagttggtactttcttgtattctcctctgcttgcttgttttttatcttctcatg |
107 |
Q |
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| T |
3139125 |
ctttgatcccaacttccaaatctcctttcttcccttaacaacacaacagttgctactttcttgtattctcctctgcttgcttgttttt-atcttatcatg |
3139027 |
T |
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| Q |
108 |
gccggtcgttacgacagtaaccccttcgacgaagaacaagtcaaccccttttctgtaagtacctcttttctcaataaagctcnnnnnnnnccaactgggt |
207 |
Q |
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| T |
3139026 |
gccggtcgttacgacagtaaccccttcgacgaagaacaagtcaaccccttttctgtaagtacctcttttctcaataaagctcatttttttccaactgggt |
3138927 |
T |
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| Q |
208 |
ctgtcaatttgatcttgttcagtcatatttgagcctacaacaacatatttatttagttttcgattttgggtttgcgacttgattcacactccttactatg |
307 |
Q |
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| T |
3138926 |
ctgtcaatttgatcttgttcagtcatatttgagcctacaacaacatatttattttgtttttgattttgggtttgcgacttgattcacactccttactatg |
3138827 |
T |
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| Q |
308 |
tttcagctggttccaattttcatgt |
332 |
Q |
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| T |
3138826 |
tttcagctggttccaattttcatgt |
3138802 |
T |
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