View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4593-Insertion-3 (Length: 164)
Name: NF4593-Insertion-3
Description: NF4593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4593-Insertion-3 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 2e-75; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 7640063 - 7640218
Alignment:
| Q |
7 |
agttagaatgccaagactagtttattgagcatagacgacattgtgaatggaatcagtttatatatagatattattgcaaattttgcttccctgaagtcga |
106 |
Q |
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| T |
7640063 |
agttagaatgccaagactagtttattgagcatagacgacattgtgaatggaatcagtttatatatagatattattgcaaattttgtttccctgaagtcga |
7640162 |
T |
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| Q |
107 |
attctttaccatgtagtgagattttatagaaaataagcttgaagtttgtagaagtgta |
164 |
Q |
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| T |
7640163 |
attctt--ccatgtagtgagattttatagaaaataagcttgaagtttgtagaagtgta |
7640218 |
T |
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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 7633307 - 7633379
Alignment:
| Q |
7 |
agttagaatgccaagactagtttattgagcatagacgacattgtgaatggaatcagtttatatatagatattattg |
82 |
Q |
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| T |
7633307 |
agttggaatgccaatactagtttatggagcatacac---attctgaatggattcagtttatatatagatattattg |
7633379 |
T |
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