View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4594_low_16 (Length: 234)

Name: NF4594_low_16
Description: NF4594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4594_low_16
NF4594_low_16
[»] chr4 (52 HSPs)
chr4 (19-216)||(38427100-38427299)
chr4 (19-148)||(6137259-6137388)
chr4 (19-148)||(34728251-34728380)
chr4 (21-146)||(5975657-5975782)
chr4 (19-148)||(32089994-32090123)
chr4 (19-148)||(42434260-42434389)
chr4 (19-148)||(51682590-51682719)
chr4 (19-148)||(51702456-51702585)
chr4 (19-147)||(19329360-19329488)
chr4 (19-147)||(34041223-34041351)
chr4 (19-148)||(13386983-13387112)
chr4 (19-148)||(20835706-20835835)
chr4 (19-137)||(32626093-32626211)
chr4 (19-148)||(11020379-11020508)
chr4 (19-148)||(20503432-20503561)
chr4 (19-145)||(32867987-32868113)
chr4 (19-148)||(48860757-48860883)
chr4 (23-147)||(33117514-33117638)
chr4 (19-126)||(16467188-16467295)
chr4 (26-148)||(43837729-43837850)
chr4 (19-108)||(27907029-27907118)
chr4 (19-145)||(52719062-52719190)
chr4 (19-126)||(6944591-6944698)
chr4 (19-118)||(40875241-40875340)
chr4 (29-140)||(47960337-47960447)
chr4 (18-124)||(13372395-13372501)
chr4 (18-124)||(13382596-13382702)
chr4 (26-148)||(13387863-13387984)
chr4 (19-137)||(40479857-40479975)
chr4 (26-147)||(52344494-52344615)
chr4 (19-147)||(38962407-38962533)
chr4 (70-148)||(22254222-22254300)
chr4 (31-129)||(28755403-28755504)
chr4 (75-146)||(38963329-38963400)
chr4 (19-74)||(28589268-28589323)
chr4 (19-67)||(7645913-7645961)
chr4 (27-93)||(53773725-53773791)
chr4 (101-148)||(54158116-54158163)
chr4 (25-82)||(849275-849331)
chr4 (27-79)||(4505239-4505291)
chr4 (27-66)||(26889493-26889531)
chr4 (21-68)||(38792300-38792347)
chr4 (29-79)||(26335927-26335977)
chr4 (29-71)||(29102172-29102214)
chr4 (27-73)||(49425741-49425787)
chr4 (27-68)||(23383912-23383953)
chr4 (27-79)||(142803-142855)
chr4 (27-79)||(11777471-11777523)
chr4 (27-79)||(15725363-15725415)
chr4 (29-73)||(45875945-45875989)
chr4 (27-79)||(50677980-50678031)
chr4 (27-79)||(54818641-54818693)
[»] chr8 (62 HSPs)
chr8 (19-148)||(38498278-38498407)
chr8 (19-148)||(26912350-26912479)
chr8 (19-140)||(39077311-39077432)
chr8 (19-148)||(9478711-9478840)
chr8 (19-147)||(5224300-5224427)
chr8 (19-146)||(12295194-12295321)
chr8 (19-148)||(28539163-28539292)
chr8 (19-148)||(10078304-10078430)
chr8 (19-148)||(23472514-23472642)
chr8 (19-148)||(33568096-33568225)
chr8 (19-119)||(253978-254078)
chr8 (19-119)||(661780-661880)
chr8 (19-147)||(16930832-16930960)
chr8 (19-148)||(9479414-9479543)
chr8 (19-147)||(40067580-40067708)
chr8 (19-146)||(22812350-22812476)
chr8 (19-147)||(16784331-16784452)
chr8 (19-148)||(30774125-30774254)
chr8 (19-119)||(847578-847678)
chr8 (19-147)||(42806210-42806340)
chr8 (36-147)||(44873913-44874024)
chr8 (26-148)||(14041330-14041452)
chr8 (19-147)||(1983506-1983634)
chr8 (19-146)||(14916690-14916817)
chr8 (19-138)||(31272802-31272921)
chr8 (24-146)||(13326964-13327084)
chr8 (27-148)||(12176243-12176363)
chr8 (27-148)||(12420671-12420791)
chr8 (19-136)||(28969128-28969244)
chr8 (19-92)||(19922566-19922639)
chr8 (39-127)||(41829567-41829655)
chr8 (19-92)||(38092157-38092230)
chr8 (26-147)||(1271058-1271182)
chr8 (43-147)||(44473748-44473852)
chr8 (19-77)||(41624679-41624737)
chr8 (76-137)||(10775933-10775994)
chr8 (26-67)||(39589973-39590014)
chr8 (19-67)||(16645508-16645556)
chr8 (21-67)||(3210897-3210943)
chr8 (21-67)||(39077162-39077208)
chr8 (100-145)||(14371613-14371658)
chr8 (27-79)||(1201632-1201684)
chr8 (27-79)||(32068985-32069037)
chr8 (110-148)||(16645537-16645575)
chr8 (110-148)||(39589995-39590033)
chr8 (110-147)||(3210924-3210961)
chr8 (26-67)||(40301372-40301412)
chr8 (27-79)||(2823783-2823835)
chr8 (27-79)||(10616254-10616306)
chr8 (27-79)||(17691178-17691230)
chr8 (27-79)||(39922456-39922508)
chr8 (27-73)||(184075-184121)
chr8 (27-73)||(7977283-7977329)
chr8 (27-73)||(26629998-26630044)
chr8 (27-68)||(34102974-34103015)
chr8 (30-63)||(42556946-42556979)
chr8 (27-99)||(13269269-13269340)
chr8 (27-79)||(26868105-26868157)
chr8 (27-79)||(27545723-27545775)
chr8 (27-67)||(29126166-29126206)
chr8 (27-79)||(36899700-36899752)
chr8 (27-79)||(42556645-42556697)
[»] chr2 (55 HSPs)
chr2 (18-148)||(39089127-39089257)
chr2 (19-147)||(18924564-18924692)
chr2 (19-147)||(42090415-42090543)
chr2 (19-148)||(29471659-29471788)
chr2 (21-148)||(1749945-1750072)
chr2 (19-148)||(9548235-9548364)
chr2 (19-147)||(12725742-12725870)
chr2 (19-146)||(10664716-10664843)
chr2 (19-148)||(33740234-33740363)
chr2 (18-137)||(21950650-21950769)
chr2 (19-148)||(24314214-24314343)
chr2 (29-148)||(16719762-16719881)
chr2 (30-140)||(2969684-2969794)
chr2 (29-146)||(44539878-44539996)
chr2 (47-147)||(39434984-39435084)
chr2 (26-147)||(4206430-4206553)
chr2 (19-104)||(12895372-12895457)
chr2 (27-147)||(39961572-39961691)
chr2 (68-148)||(25810479-25810559)
chr2 (27-148)||(25880575-25880699)
chr2 (19-66)||(6231240-6231287)
chr2 (34-82)||(2969625-2969673)
chr2 (27-92)||(5534322-5534387)
chr2 (19-67)||(10862595-10862643)
chr2 (19-67)||(34450334-34450382)
chr2 (27-148)||(34125582-34125699)
chr2 (26-67)||(29511870-29511911)
chr2 (110-148)||(10862576-10862614)
chr2 (29-79)||(29512261-29512311)
chr2 (29-67)||(36779841-36779879)
chr2 (26-67)||(27175505-27175545)
chr2 (27-67)||(5601710-5601749)
chr2 (27-79)||(11675112-11675164)
chr2 (19-67)||(14747383-14747431)
chr2 (27-79)||(16513253-16513305)
chr2 (19-67)||(27097052-27097100)
chr2 (27-79)||(34082527-34082579)
chr2 (27-79)||(37169517-37169569)
chr2 (101-144)||(27175517-27175560)
chr2 (27-73)||(13002204-13002250)
chr2 (101-147)||(33471431-33471477)
chr2 (110-147)||(6231221-6231258)
chr2 (111-148)||(14747413-14747450)
chr2 (44-89)||(22594096-22594141)
chr2 (27-68)||(33739518-33739559)
chr2 (110-147)||(36779860-36779897)
chr2 (27-79)||(768727-768779)
chr2 (27-79)||(1576613-1576665)
chr2 (42-90)||(4293402-4293450)
chr2 (27-79)||(8386657-8386709)
chr2 (27-79)||(23387309-23387361)
chr2 (116-148)||(27097033-27097065)
chr2 (27-79)||(32601351-32601403)
chr2 (110-146)||(34450317-34450353)
chr2 (27-79)||(41528078-41528130)
[»] chr7 (54 HSPs)
chr7 (19-146)||(21993471-21993598)
chr7 (19-148)||(45099970-45100099)
chr7 (29-148)||(5995090-5995209)
chr7 (21-146)||(3961178-3961303)
chr7 (19-148)||(35983106-35983235)
chr7 (19-148)||(36004518-36004647)
chr7 (19-148)||(41378398-41378527)
chr7 (19-148)||(43077520-43077649)
chr7 (19-148)||(48227258-48227387)
chr7 (19-148)||(3203314-3203447)
chr7 (19-148)||(31953158-31953287)
chr7 (21-148)||(46003761-46003889)
chr7 (19-145)||(41037127-41037253)
chr7 (26-148)||(42373493-42373614)
chr7 (27-147)||(35221700-35221825)
chr7 (29-148)||(38368159-38368277)
chr7 (19-115)||(41585906-41586002)
chr7 (27-148)||(27130996-27131116)
chr7 (19-126)||(24611437-24611544)
chr7 (27-140)||(12362868-12362980)
chr7 (29-147)||(27946861-27946978)
chr7 (26-146)||(20568259-20568379)
chr7 (27-147)||(24251831-24251948)
chr7 (19-148)||(9522493-9522619)
chr7 (19-81)||(26927992-26928054)
chr7 (65-148)||(3875108-3875189)
chr7 (19-82)||(3350041-3350104)
chr7 (26-113)||(48709070-48709156)
chr7 (19-64)||(28333790-28333835)
chr7 (19-71)||(14656530-14656582)
chr7 (62-129)||(36343021-36343088)
chr7 (19-67)||(20009208-20009256)
chr7 (19-67)||(48624973-48625021)
chr7 (103-148)||(32392287-32392332)
chr7 (27-79)||(9401617-9401669)
chr7 (29-79)||(6559539-6559589)
chr7 (24-73)||(3407179-3407227)
chr7 (101-146)||(20417981-20418026)
chr7 (26-67)||(32392272-32392313)
chr7 (62-147)||(42090235-42090320)
chr7 (27-79)||(939078-939130)
chr7 (27-79)||(19069579-19069631)
chr7 (27-79)||(25818668-25818720)
chr7 (27-79)||(28912265-28912317)
chr7 (26-82)||(44868036-44868091)
chr7 (27-73)||(2509288-2509334)
chr7 (101-147)||(14313952-14313998)
chr7 (27-73)||(15957181-15957227)
chr7 (81-147)||(28059314-28059379)
chr7 (110-148)||(48625002-48625040)
chr7 (26-66)||(7596914-7596953)
chr7 (27-79)||(11766304-11766356)
chr7 (106-146)||(20009233-20009273)
chr7 (110-146)||(28333819-28333855)
[»] chr5 (44 HSPs)
chr5 (19-148)||(23204376-23204505)
chr5 (22-148)||(28038237-28038363)
chr5 (26-148)||(19323737-19323859)
chr5 (19-148)||(9741725-9741854)
chr5 (19-148)||(16994169-16994298)
chr5 (19-148)||(37172422-37172551)
chr5 (19-148)||(18015643-18015771)
chr5 (19-148)||(38758651-38758779)
chr5 (19-146)||(20269235-20269362)
chr5 (27-147)||(27365716-27365835)
chr5 (19-148)||(17689369-17689497)
chr5 (19-126)||(38293508-38293616)
chr5 (19-148)||(28813088-28813218)
chr5 (44-148)||(16273620-16273724)
chr5 (19-117)||(19325067-19325166)
chr5 (19-92)||(26730335-26730407)
chr5 (19-146)||(15978804-15978931)
chr5 (26-148)||(13960415-13960536)
chr5 (19-107)||(19995319-19995404)
chr5 (27-140)||(31042562-31042674)
chr5 (27-148)||(31056411-31056531)
chr5 (19-67)||(16490949-16490997)
chr5 (68-148)||(33429221-33429301)
chr5 (27-85)||(5497782-5497839)
chr5 (79-148)||(21913836-21913905)
chr5 (27-79)||(17232879-17232931)
chr5 (27-79)||(4083905-4083957)
chr5 (27-79)||(4738099-4738151)
chr5 (27-79)||(6436590-6436642)
chr5 (27-79)||(7944454-7944506)
chr5 (27-79)||(17210182-17210234)
chr5 (27-79)||(17233237-17233289)
chr5 (96-148)||(19994565-19994617)
chr5 (27-79)||(28747930-28747982)
chr5 (27-79)||(33832885-33832937)
chr5 (101-148)||(15388222-15388269)
chr5 (101-148)||(23129647-23129694)
chr5 (110-148)||(16490776-16490814)
chr5 (102-148)||(19863159-19863205)
chr5 (27-73)||(32736427-32736473)
chr5 (27-79)||(14369934-14369986)
chr5 (27-79)||(17421861-17421913)
chr5 (27-79)||(33696220-33696272)
chr5 (87-147)||(43126949-43127009)
[»] chr3 (63 HSPs)
chr3 (19-148)||(54160388-54160517)
chr3 (19-145)||(39328415-39328541)
chr3 (19-148)||(3283303-3283432)
chr3 (19-148)||(21395892-21396021)
chr3 (19-148)||(50090861-50090990)
chr3 (26-148)||(36418713-36418835)
chr3 (19-148)||(9665309-9665438)
chr3 (19-147)||(8674537-8674665)
chr3 (19-147)||(45408247-45408375)
chr3 (26-148)||(37702608-37702730)
chr3 (19-148)||(54411823-54411952)
chr3 (19-147)||(52945571-52945698)
chr3 (19-148)||(13700281-13700410)
chr3 (19-148)||(19855464-19855593)
chr3 (19-148)||(54253826-54253955)
chr3 (19-129)||(34673375-34673485)
chr3 (19-140)||(8351060-8351181)
chr3 (19-119)||(41355442-41355542)
chr3 (29-148)||(6125770-6125888)
chr3 (18-148)||(42092807-42092938)
chr3 (19-137)||(20513062-20513180)
chr3 (44-145)||(34673524-34673625)
chr3 (19-148)||(35711859-35711988)
chr3 (19-130)||(38101220-38101331)
chr3 (19-119)||(35280437-35280537)
chr3 (26-148)||(5232652-5232777)
chr3 (21-104)||(27026670-27026753)
chr3 (19-125)||(4125996-4126102)
chr3 (27-124)||(11238690-11238787)
chr3 (27-148)||(35180573-35180694)
chr3 (19-115)||(19228596-19228692)
chr3 (19-101)||(27038014-27038096)
chr3 (44-129)||(34673462-34673547)
chr3 (21-129)||(46354034-46354143)
chr3 (49-148)||(39867131-39867230)
chr3 (26-124)||(52089066-52089164)
chr3 (21-90)||(21481947-21482016)
chr3 (27-92)||(53518908-53518973)
chr3 (27-128)||(36227811-36227911)
chr3 (43-142)||(27432050-27432150)
chr3 (18-67)||(46969928-46969977)
chr3 (100-147)||(27027332-27027379)
chr3 (50-104)||(4043919-4043973)
chr3 (27-73)||(27418802-27418847)
chr3 (34-76)||(53518868-53518910)
chr3 (39-85)||(45408396-45408441)
chr3 (101-147)||(46770495-46770541)
chr3 (27-79)||(12127713-12127765)
chr3 (27-79)||(17605645-17605697)
chr3 (27-79)||(33837777-33837829)
chr3 (27-79)||(50801746-50801798)
chr3 (27-79)||(50874082-50874134)
chr3 (27-66)||(46770514-46770552)
chr3 (29-75)||(8814952-8814998)
chr3 (29-75)||(8815162-8815208)
chr3 (27-73)||(13349307-13349353)
chr3 (29-79)||(31039525-31039575)
chr3 (28-73)||(29239568-29239613)
chr3 (110-147)||(46969958-46969995)
chr3 (29-73)||(1375971-1376015)
chr3 (27-79)||(3800369-3800421)
chr3 (29-73)||(22894521-22894565)
chr3 (27-67)||(51614648-51614688)
[»] chr6 (27 HSPs)
chr6 (19-146)||(10074994-10075121)
chr6 (19-138)||(12159476-12159595)
chr6 (19-145)||(17347074-17347200)
chr6 (26-148)||(6322489-6322611)
chr6 (19-130)||(15081138-15081249)
chr6 (26-148)||(9891372-9891494)
chr6 (19-148)||(18096330-18096453)
chr6 (21-146)||(19104310-19104442)
chr6 (19-148)||(18102450-18102573)
chr6 (19-94)||(25090549-25090624)
chr6 (30-148)||(9533364-9533486)
chr6 (18-92)||(14975433-14975505)
chr6 (54-116)||(7190635-7190697)
chr6 (19-61)||(29427262-29427304)
chr6 (26-80)||(32645707-32645761)
chr6 (18-70)||(24553234-24553286)
chr6 (19-67)||(19143648-19143694)
chr6 (27-71)||(11742501-11742545)
chr6 (27-73)||(18102868-18102914)
chr6 (110-148)||(19143629-19143667)
chr6 (27-73)||(25061832-25061878)
chr6 (30-78)||(21969857-21969905)
chr6 (111-147)||(28295551-28295587)
chr6 (111-147)||(28516486-28516522)
chr6 (30-77)||(29375221-29375269)
chr6 (111-147)||(32645436-32645472)
chr6 (27-79)||(33730697-33730749)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-148)||(35053-35182)
[»] scaffold0002 (3 HSPs)
scaffold0002 (19-142)||(478315-478438)
scaffold0002 (19-91)||(94837-94909)
scaffold0002 (105-146)||(95051-95092)
[»] chr1 (58 HSPs)
chr1 (17-148)||(7336084-7336215)
chr1 (29-148)||(30414140-30414259)
chr1 (19-148)||(1406709-1406838)
chr1 (26-146)||(47921562-47921682)
chr1 (21-148)||(2964892-2965019)
chr1 (21-147)||(25671007-25671133)
chr1 (19-147)||(1838688-1838817)
chr1 (19-148)||(44720065-44720193)
chr1 (19-147)||(1627703-1627830)
chr1 (19-146)||(14463321-14463448)
chr1 (19-134)||(24992893-24993008)
chr1 (19-148)||(25825326-25825455)
chr1 (19-146)||(40460983-40461110)
chr1 (19-129)||(43939480-43939590)
chr1 (19-146)||(9005430-9005555)
chr1 (19-107)||(8549590-8549678)
chr1 (19-146)||(5226801-5226928)
chr1 (22-148)||(42470756-42470882)
chr1 (31-146)||(15661119-15661234)
chr1 (25-147)||(26213733-26213855)
chr1 (29-146)||(17168157-17168273)
chr1 (19-147)||(10769797-10769924)
chr1 (40-148)||(17452945-17453053)
chr1 (19-147)||(4105513-4105632)
chr1 (49-146)||(30819571-30819668)
chr1 (19-90)||(26897311-26897382)
chr1 (57-147)||(30289030-30289120)
chr1 (18-119)||(6813855-6813955)
chr1 (66-143)||(41146547-41146624)
chr1 (19-72)||(49660363-49660416)
chr1 (19-63)||(26284535-26284579)
chr1 (80-148)||(49659891-49659959)
chr1 (31-114)||(10835582-10835664)
chr1 (19-76)||(42470572-42470629)
chr1 (19-67)||(1469723-1469771)
chr1 (27-79)||(16005747-16005799)
chr1 (19-67)||(26842829-26842877)
chr1 (64-119)||(36630385-36630440)
chr1 (110-148)||(1469752-1469790)
chr1 (27-73)||(28454887-28454933)
chr1 (29-79)||(28764511-28764560)
chr1 (27-68)||(20201672-20201713)
chr1 (27-79)||(462979-463031)
chr1 (27-79)||(10558173-10558225)
chr1 (27-79)||(16073399-16073451)
chr1 (29-79)||(3273517-3273567)
chr1 (27-73)||(8643175-8643221)
chr1 (27-73)||(10764781-10764827)
chr1 (29-79)||(13264723-13264773)
chr1 (29-79)||(23413819-23413869)
chr1 (110-148)||(26842810-26842848)
chr1 (27-73)||(26842965-26843011)
chr1 (27-73)||(27787812-27787858)
chr1 (100-148)||(14345694-14345743)
chr1 (27-79)||(158375-158427)
chr1 (27-79)||(6192385-6192437)
chr1 (27-91)||(20201871-20201934)
chr1 (27-79)||(51432029-51432081)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-148)||(231157-231286)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-148)||(392405-392534)
[»] scaffold0093 (1 HSPs)
scaffold0093 (19-144)||(9155-9279)
[»] scaffold0004 (1 HSPs)
scaffold0004 (19-147)||(121661-121789)
[»] scaffold0246 (1 HSPs)
scaffold0246 (19-137)||(17796-17914)
[»] scaffold0009 (1 HSPs)
scaffold0009 (33-147)||(49821-49934)
[»] scaffold0003 (1 HSPs)
scaffold0003 (27-144)||(103283-103399)
[»] scaffold0091 (1 HSPs)
scaffold0091 (29-116)||(3748-3835)
[»] scaffold0007 (1 HSPs)
scaffold0007 (69-145)||(77027-77103)
[»] scaffold0057 (1 HSPs)
scaffold0057 (19-68)||(75002-75051)
[»] scaffold0112 (2 HSPs)
scaffold0112 (27-67)||(35935-35975)
scaffold0112 (110-147)||(35956-35993)
[»] scaffold0086 (2 HSPs)
scaffold0086 (19-67)||(8556-8604)
scaffold0086 (106-148)||(8581-8623)
[»] scaffold1808 (1 HSPs)
scaffold1808 (27-79)||(746-798)
[»] scaffold0325 (1 HSPs)
scaffold0325 (27-79)||(6721-6773)
[»] scaffold0627 (1 HSPs)
scaffold0627 (27-73)||(4241-4287)


Alignment Details
Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 38427100 - 38427299
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38427100 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgctaaaagaca 38427199  T
Q  119 ctttcataaaaggtgtcttctagcaaaac--cnnnnnnnnnnnnnnntggattgcttacggtataaattgtgtctcgatatttcattctagctttaagaa 216  Q
    |||||||||||||||||||||||||||||                  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38427200 ctttcataaaaggtgtcttctagcaaaacatatatatatatatatattggattgcttacggtataaattgtgtctcgatatttcgttctagctttaagaa 38427299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 6137388 - 6137259
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  6137388 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataacttgctaaaagaca 6137289  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  6137288 cattcataaaaggtgtcttctagcaaaacc 6137259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 34728251 - 34728380
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  34728251 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgcttatagaataacttgctaaaagaca 34728350  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  34728351 ccttcataaaaggtgtcttctagcaaaacc 34728380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 5975782 - 5975657
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacact 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||     
T  5975782 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctttcaacaaatgctaatataataacttgctaaaagacacc 5975683  T
Q  121 ttcataaaaggtgtcttctagcaaaa 146  Q
    ||||||||| ||||||||||||||||    
T  5975682 ttcataaaatgtgtcttctagcaaaa 5975657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 32089994 - 32090123
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  32089994 tgattttcactttttagttataactttgttaaaagacacattcataaaaattagttggtgtcttttaacaaatgctaataaaataacttgctaaaagaca 32090093  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||| |||||||||||||||||    
T  32090094 ccttcataaaagatgtcttctagcaaaacc 32090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 42434260 - 42434389
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||    
T  42434260 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaaaaaca 42434359  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||| |||||||||||||||| |||||||    
T  42434360 ccttcctaaaaggtgtcttctaacaaaacc 42434389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 51682590 - 51682719
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||    
T  51682590 tgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaaaaca 51682689  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||||||| |||||||||||||    
T  51682690 ccttcataaaaggtgttttctagcaaaacc 51682719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 51702585 - 51702456
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||||||||    
T  51702585 tgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcatagaataacttgctaaaagaca 51702486  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||| ||||||||||||||||||||    
T  51702485 ctttcataagaggtgtcttctagcaaaacc 51702456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 19329488 - 19329360
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||    
T  19329488 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgatcatagaataatttgttaaaataca 19329389  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | |||||||||| ||| ||||||||||||    
T  19329388 ccttcataaaagatgttttctagcaaaac 19329360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 34041223 - 34041351
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||| ||||||| |||||||||    
T  34041223 tgattttcactttttagttataactttgctaaaagacaccttcattaaaattacttggtgtcttttaacaaatgcttatagagtaacttgctaaaagaca 34041322  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | ||||||||| |||||||||||||||||    
T  34041323 cattcataaaatgtgtcttctagcaaaac 34041351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 13387112 - 13386983
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  13387112 tgattttcacattttagttataactatgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 13387013  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | || |||||| ||||||||||||||||||    
T  13387012 cctttataaaatgtgtcttctagcaaaacc 13386983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 20835835 - 20835706
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  20835835 tgatttccattttttagttataactttgctaaaagacaccttcgtaaaatttagttggtatcttttaacaaatgctaatagaataacttgctaaaagaca 20835736  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||| ||||||||||    
T  20835735 ccttcataaaaggtgtcttatagcaaaacc 20835706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 32626093 - 32626211
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  32626093 tgatttccactttttagttataactttgctaaaagacaacttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 32626192  T
Q  119 ctttcataaaaggtgtctt 137  Q
    | |||||||||||||||||    
T  32626193 ccttcataaaaggtgtctt 32626211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 11020379 - 11020508
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||| ||||| |||    
T  11020379 tgatttccactttttagttataactttgctaaaagacaccttcataaaaaataattggtatcttttaacaaatgttcatagaataacttgctaaaacaca 11020478  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||| || |||||||    
T  11020479 ccttcataaaaggtgtcttttaacaaaacc 11020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 20503561 - 20503432
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||| |||| ||||| |||    
T  20503561 tgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaaca 20503462  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||| ||||||||||||||    
T  20503461 ccttcataaaaggtgccttctagcaaaacc 20503432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 32868113 - 32867987
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  32868113 tgattttcactttttagttataactttgctaaaacacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaaagaca 32868014  T
Q  119 ctttcataaaaggtgtcttctagcaaa 145  Q
    | || | ||||||  | ||||||||||    
T  32868013 catttacaaaaggctttttctagcaaa 32867987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 48860757 - 48860883
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  48860757 tgatttccattttttagttataactttgcgaaaagacaccttcataa---ttagttggtgtcttttaacaaatgctcatagaataacttgctaaaagaca 48860853  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | || |||||||||||||||||||||||||    
T  48860854 cctttataaaaggtgtcttctagcaaaacc 48860883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 33117638 - 33117514
Alignment:
Q  23 tttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacacttt 122  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| |||||| | |||||||| |||| ||||| |||| ||    
T  33117638 tttcactttttagttataactttgttaaaagacacctttataaaaattagttggtgacttttagcaaatgatcatagaatatcttgctaaaatacacctt 33117539  T
Q  123 cataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| ||||||||||||||    
T  33117538 cataaaaggtatcttctagcaaaac 33117514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 16467188 - 16467295
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||||||||    
T  16467188 tgattttcactttttagttataactttgttaaaagataccttcataaaaattagttggtgctttttaacaaatgttcatataataacttgttaaaagaca 16467287  T
Q  119 ctttcata 126  Q
    | ||||||    
T  16467288 ccttcata 16467295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 43837729 - 43837850
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||   |||| |||||||| |||| ||||| |||||    
T  43837729 cactttttagttataactt-gctaaaggacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaacgacaccttcat 43837827  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||||||    
T  43837828 aaaaggtgtcttctagcaaaacc 43837850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 27907118 - 27907029
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttg 108  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  27907118 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttg 27907029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 52719190 - 52719062
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacac--cttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaaga 116  Q
    ||||||||||||||||||||||| |||| ||||||||||  |||| ||||||||||||| |||||||||||||||| ||||||||||| ||||||||  |    
T  52719190 tgattttcactttttagttataattttgttaaaagacacaccttcgtaaaaattagttgatgtcttttaacaaatgctaatagaataatttgttaaagaa 52719091  T
Q  117 cactttcataaaaggtgtcttctagcaaa 145  Q
    ||| ||||||||| |||||||||||||||    
T  52719090 caccttcataaaatgtgtcttctagcaaa 52719062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 6944591 - 6944698
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| | ||||||||||||| |||||||||    
T  6944591 tgatttccactttttagttataactttgctaaaagacaccttcataaaacttagttggtgtcgtttagcaaatgctcatagaataacttgctaaaagaca 6944690  T
Q  119 ctttcata 126  Q
    | ||||||    
T  6944691 ccttcata 6944698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 40875340 - 40875241
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  | ||||||  |||||||||||||||    
T  40875340 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctttgaacaaatactcatagaaatacttgttaaaagaca 40875241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 47960337 - 47960447
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||   |||| |||||||| |||||||||| ||||||||    
T  47960337 tttttagttataactt-gctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacaccttcataaa 47960435  T
Q  129 aggtgtcttcta 140  Q
    ||||||||||||    
T  47960436 aggtgtcttcta 47960447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 13372501 - 13372395
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || |||||||||| ||||||||    
T  13372501 atgatttccacttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatggaataacttgctaaaagac 13372402  T
Q  118 actttca 124  Q
    || ||||    
T  13372401 accttca 13372395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 13382702 - 13382596
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || |||||||||| ||||||||    
T  13382702 atgatttccacttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatggaataacttgctaaaagac 13382603  T
Q  118 actttca 124  Q
    || ||||    
T  13382602 accttca 13382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 13387984 - 13387863
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||  ||||    
T  13387984 cactttttagttataattttgctaaaaggcacctttataaaaatttgttggtgtcttttaacaaatgtcaataggataacttgctaaaagacac-ctcat 13387886  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||| ||||| ||||||||||||    
T  13387885 aaaatgtgtcatctagcaaaacc 13387863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 40479975 - 40479857
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||| ||  ||||| |||    
T  40479975 tgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttgatgtcttttaacaaatgttaattgagtaaattactaaaaaaca 40479876  T
Q  119 ctttcataaaaggtgtctt 137  Q
      |||||||||||||||||    
T  40479875 tattcataaaaggtgtctt 40479857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 52344615 - 52344494
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||| ||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | ||||| || || |||||    
T  52344615 cactttttaattataaacttgctaaaagacacattcataaatattagttggtgtcttttaacaaatgcttatagaataacatattaaatgatacattcat 52344516  T
Q  126 aaaaggtgtcttctagcaaaac 147  Q
    |||| |||||||||||||||||    
T  52344515 aaaatgtgtcttctagcaaaac 52344494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 38962533 - 38962407
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||| |||||||||||||||||  || ||| ||||||||||||||||||||||||||||||| | ||| | | ||||| |||||||||    
T  38962533 tgattttcactttttatttataactttgctaaaa--catctttataaaaattagttggtgtcttttaacaaatgcttataaagtgacttgctaaaagaca 38962436  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | ||||||| || ||| ||||||||||||    
T  38962435 ccttcataatagttgtattctagcaaaac 38962407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 148
Target Start/End: Complemental strand, 22254300 - 22254222
Alignment:
Q  70 tagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||  |||||||||||||||||    
T  22254300 tagttggtgtcttttaacaaatgccaatagaataacttgctaaaagacaccttcataaaaaatgtcttctagcaaaacc 22254222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 28755504 - 28755403
Alignment:
Q  31 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg---ttaatagaataacttgttaaaagacactttcataa 127  Q
    ||||||||||| |||  ||||||||| |||||||||||||| ||||||||||||||||||||    ||| | |||||||||||||||||||| |||||||    
T  28755504 tttagttataattttattaaaagacaacttcataaaaattaattggtgtcttttaacaaatgctcataaaataataacttgttaaaagacaccttcataa 28755405  T
Q  128 aa 129  Q
    ||    
T  28755404 aa 28755403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 38963329 - 38963400
Alignment:
Q  75 ggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    ||||||||||| |||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  38963329 ggtgtcttttagcaaatgctcatagaataacttgctaaaagacacattcataaaaggtgtcttctagcaaaa 38963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 28589268 - 28589323
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagtt 74  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  28589268 tgattttcactttttagttataactttgctaaaaaacatcttcataaaaattagtt 28589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 7645913 - 7645961
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7645913 tgattttcactttttagttataactttgctaaaagataccttcataaaa 7645961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 53773725 - 53773791
Alignment:
Q  27 actttttagttataactttgctaaaa-gacaccttcataaaaattagttggtgtcttttaacaaatgt 93  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| || |||||||    
T  53773725 actttttagttataactt-gctaaaaagacaccatcataaaaattagttggtgtcttctagcaaatgt 53773791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 54158163 - 54158116
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  54158163 ataacttgctaaaagacaccttcataaaaggtgtcttctagcaaaacc 54158116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 849275 - 849331
Alignment:
Q  25 tcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctt 82  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||  |||||||    
T  849275 tcactttttagttataactt-gctaaaagacaccttcctaaaaactagtgagtgtctt 849331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 4505291 - 4505239
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||||||||| ||||||| |||||||||||| |||||    
T  4505291 actttttagttatatttttgctaaaacacaccttaataaaaattagtgggtgt 4505239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 26889531 - 26889493
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaa 66  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26889531 actttttagttataactt-gctaaaagacaccttcataaa 26889493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 38792300 - 38792347
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaa 68  Q
    |||| ||| ||||||||||||||||||||||||| ||||| |||||||    
T  38792300 atttccaccttttagttataactttgctaaaagatacctttataaaaa 38792347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 26335927 - 26335977
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  26335927 tttttagttatatctttgctaaaatacaccttaataaaaactagtgggtgt 26335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 29102172 - 29102214
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaatta 71  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  29102172 tttttagttatatctttgctaaaacacaccttaataaaaatta 29102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 49425787 - 49425741
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  49425787 actttttagttatatctttgctaaaacacaccttaataaaaactagt 49425741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 23383953 - 23383912
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaa 68  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  23383953 actttttagttatatctttgctaaaacacaccttaataaaaa 23383912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 142803 - 142855
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| |||| |||||| |||||||  |||||| ||||||||||    
T  142803 actttttagttatatctttcctaaaacacaccttagtaaaaactagttggtgt 142855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 11777523 - 11777471
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| | ||||| ||||||| |||| |||||    
T  11777523 actttttagttatacctttgctaaaacataccttaataaaaactagtgggtgt 11777471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 15725363 - 15725415
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||| |||| |||||    
T  15725363 actttttagttatatctttgttaaaacacaccttaataaaaactagtgggtgt 15725415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 45875945 - 45875989
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  45875945 tttttagttatatctttgctaaaacacaccttaataaaaactagt 45875989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 50677980 - 50678031
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||||| ||||||||| ||||||| ||||||| |||| |||||    
T  50677980 actttttagttataac-ttgctaaaacacaccttaataaaaactagtgggtgt 50678031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 54818641 - 54818693
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||||||||| ||||||| ||||||| |||| |||||    
T  54818641 actttttagttatatgtttgctaaaacacaccttaataaaaactagtgggtgt 54818693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 38498278 - 38498407
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  38498278 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgttaatagaataacttgctaaaagaca 38498377  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  38498378 ccttcataaaaggtgtcttctagcaaaacc 38498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 26912350 - 26912479
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  26912350 tgattttcacttttcagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaaagaca 26912449  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  26912450 cattcataaaatgtgtcttctagcaaaacc 26912479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 39077311 - 39077432
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  39077311 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaagaca 39077410  T
Q  119 ctttcataaaaggtgtcttcta 140  Q
    | ||||||||||||||||||||    
T  39077411 ccttcataaaaggtgtcttcta 39077432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 9478840 - 9478711
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  9478840 tgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgctaaaaaaca 9478741  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
     |||||| |||||||||||||| |||||||    
T  9478740 ttttcattaaaggtgtcttctaacaaaacc 9478711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 5224427 - 5224300
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5224427 tgatttccactttttagttataactttgctaaaa-acaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagaca 5224329  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | ||||||||| ||||||| |||||||||    
T  5224328 ccttcataaaaagtgtcttatagcaaaac 5224300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 12295194 - 12295321
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||    
T  12295194 tgatttccactttttagttataactttgctaaaagacaccttcataaaatttaattggtatcttttaacaaatgctaatagaataacttgctaaaagaca 12295293  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||||||||||| ||||||||    
T  12295294 cattcataaaaggtgtcttatagcaaaa 12295321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 28539292 - 28539163
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||| |||||||||    
T  28539292 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttaacaaatgctcataaaataacttgctaaaagaca 28539193  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
      ||||||||| |||||||||| |||||||    
T  28539192 tattcataaaatgtgtcttctaacaaaacc 28539163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 10078430 - 10078304
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  10078430 tgatttccactttttagtta---ctttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 10078334  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  10078333 ccttcataaaaggtgtcttctagcaaaacc 10078304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 23472642 - 23472514
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  | |||||||||| || |||||||||    
T  23472642 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttagcaaatcctcatagaataac-tgctaaaagaca 23472544  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  23472543 ccttcataaaaggtgtcttctagcaaaacc 23472514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 33568096 - 33568225
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  33568096 tgatttttattttttagttataactttgctaaaagacaccttcataaaaactagttggtgtcttttaacaaatgctcatagaataacttgataaaagaca 33568195  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | || |||||| |||||||||| |||||||    
T  33568196 cctttataaaatgtgtcttctaacaaaacc 33568225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 253978 - 254078
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  253978 tgattttcactttttagttataactttgctaaaagacactttcctaaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagaca 254077  T
Q  119 c 119  Q
    |    
T  254078 c 254078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 661880 - 661780
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  661880 tgattttcactttttagttataactttgctaaaagacactttcctaaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagaca 661781  T
Q  119 c 119  Q
    |    
T  661780 c 661780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 16930832 - 16930960
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||    
T  16930832 tgatttccactttttagttataactttgctaaaaaacactttcataaaaattagttggtgtcttttaaaaaatgctcatagaataacttgctaaaagaca 16930931  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | |||||||||||| ||||||| ||||||    
T  16930932 ccttcataaaaggtatcttctatcaaaac 16930960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 9479543 - 9479414
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| |||||| | ||||||||||||| |||||||||    
T  9479543 tgatttccactttttagttataactttgttaaaagacactttcataaaaattagtttgtgtcttttagcaaatgctcatagaataacttgctaaaagaca 9479444  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| |||||||||| |||||||    
T  9479443 ccttcataaaatgtgtcttctaacaaaacc 9479414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 40067580 - 40067708
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  40067580 tgatttccactttttagttataattttgttaaaatacaccttcataaaaattagttggtgtcttttaacaaatatttatagaataacttgctaaaagaca 40067679  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | |||||||| | |||||||||| |||||    
T  40067680 cattcataaatgatgtcttctagaaaaac 40067708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 22812350 - 22812476
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || ||||||| |    
T  22812350 tgattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacgtgctaaaagata 22812449  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    |  | |||||| ||||||||||||||||    
T  22812450 c-ctaataaaatgtgtcttctagcaaaa 22812476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 16784452 - 16784331
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| || |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  16784452 tgatttccattttttagttataactttgcta-------ccttcataaaaattagttggtgtcttttaacaaatgttaatataataacttgctaaaagaca 16784360  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | |||||||||||||||||||||||||||    
T  16784359 ccttcataaaaggtgtcttctagcaaaac 16784331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 30774254 - 30774125
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||| ||||| |||| || |||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |||    
T  30774254 tgatttccactttttagttatacctttgttaaaggataccttcataaaaattagttggtatcttttagcaaatgctcatagaataacttgctaaaaaaca 30774155  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  30774154 ccttcataaaaggtgtcttctagcaaaacc 30774125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 847678 - 847578
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  847678 tgattttcactttttagttttaactttgctaaaagacacttccctaaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagaca 847579  T
Q  119 c 119  Q
    |    
T  847578 c 847578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 42806340 - 42806210
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgtt--aatagaataacttgttaaaaga 116  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |   ||| ||||| ||| |||||||    
T  42806340 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagtttgtgtcttctaacaaatgctcatataaaataatttgctaaaaga 42806241  T
Q  117 cactttcataaaaggtgtcttctagcaaaac 147  Q
    ||  |||||||||||||||||||||||||||    
T  42806240 catcttcataaaaggtgtcttctagcaaaac 42806210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 44874024 - 44873913
Alignment:
Q  36 ttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtc 135  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||| ||||| |||| |||||||||||||||    
T  44874024 ttataactttgctaaaagacaccttcataaaaattagctggtgtcttttagcaaatgctcatagaataacttgctaaaaaacaccttcataaaaggtgtc 44873925  T
Q  136 ttctagcaaaac 147  Q
    ||||| ||||||    
T  44873924 ttctaacaaaac 44873913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 14041452 - 14041330
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| ||||| |||| |||||    
T  14041452 cactttttagttataactttgttaaaagacaccttcataaaaattaattggtgttttttaacaaatgtcaataggataacttgctaaaaaacaccttcat 14041353  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    ||||| ||| |||| ||||||||    
T  14041352 aaaagatgttttctggcaaaacc 14041330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 1983506 - 1983634
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| | | ||||||||||| || ||||||||| |||||||||||||    
T  1983506 tgattttcacattttagttatagctttgctaaaagacactttcataaaaattagttgatattttttaacaaatttttatagaataatttgttaaaagaca 1983605  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | ||||||||| |||||||| || |||||    
T  1983606 ccttcataaaatgtgtcttccagtaaaac 1983634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 14916690 - 14916817
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||| |||    
T  14916690 tgattttcacttttttgttataactttgttaaaagataccttcataaaaattagttggtatcttttagcaaatgctcatagaataacttgctaaaaaaca 14916789  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | |||||| ||| | |||| ||||||||    
T  14916790 cattcatataagatatcttatagcaaaa 14916817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 31272802 - 31272921
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||  | ||||||||| ||||||||| |||    
T  31272802 tgatttccactttttagttataattttgctaaaagacatctttataaaaattagttgttgtcttttaacaaatactcatagaataatttgttaaaaaaca 31272901  T
Q  119 ctttcataaaaggtgtcttc 138  Q
    | ||||||||| ||||||||    
T  31272902 ccttcataaaatgtgtcttc 31272921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 13326964 - 13327084
Alignment:
Q  24 ttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttc 123  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||||| |||||| | ||| ||||||||| ||||||| || |||    
T  13326964 ttcactttttagttataactt-gataaaagacaacttcataaaaattagttggcgtcttttagcaaatg-tcataaaataacttgctaaaagataccttc 13327061  T
Q  124 ataaaaggtgtcttctagcaaaa 146  Q
    |||||| ||||||||||||||||    
T  13327062 ataaaatgtgtcttctagcaaaa 13327084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 12176243 - 12176363
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||| ||| ||   |||| |||||||| ||||| |||| ||||||    
T  12176243 actttttagttataacct-gctaaaagacaccttgataaaaattatttggtgtcttttagcaattgcctataggataacttgctaaaacacaccttcata 12176341  T
Q  127 aaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||||    
T  12176342 aaaggtgtcttctagcaaaacc 12176363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 12420671 - 12420791
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||||| ||| ||   |||| |||||||| ||||| |||| ||||||    
T  12420671 actttttagttataacct-gctaaaagacaccttgataaaaattatttggtgtcttttagcaattgcctataggataacttgctaaaacacaccttcata 12420769  T
Q  127 aaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||||    
T  12420770 aaaggtgtcttctagcaaaacc 12420791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 28969128 - 28969244
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||| | ||||||||| ||| ||||| |||    
T  28969128 tgatttccactttttagttataactttgttaaaagatactttcataaaaattaattggtgtcttttaacaaatgctcatagaataaattgctaaaaaaca 28969227  T
Q  119 ctttcataaaaggtgtct 136  Q
    | |||| |||||||||||    
T  28969228 ccttca-aaaaggtgtct 28969244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 19922639 - 19922566
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 92  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19922639 tgatttccaccttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatg 19922566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 41829567 - 41829655
Alignment:
Q  39 taactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataa 127  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||  |||||||    
T  41829567 taactttgttaaaagacatcttcataaaaattagtttgtgtcttttaacaaatgttcatagaataacttgctaaaagacatcttcataa 41829655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 38092230 - 38092157
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 92  Q
    |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||    
T  38092230 tgatttccactttttagttataactttgttaaatgacacgttcataaaaattaattggtgtcttttaacaaatg 38092157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 1271058 - 1271182
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaa----caaatgttaatagaataacttgttaaaagacactt 121  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||| ||||||    |||||    |||| |||||||||||||| |||| |    
T  1271058 cactttttaattataactt-gttaaaagacaccttcataaaaattagttggtgtattttaattagcaaatacatataggataacttgttaaaaaacacct 1271156  T
Q  122 tcataaaaggtgtcttctagcaaaac 147  Q
    | ||||| ||||||||||||||||||    
T  1271157 ttataaagggtgtcttctagcaaaac 1271182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 44473852 - 44473748
Alignment:
Q  43 tttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagc 142  Q
    ||||||| |||| | ||| ||||||||||||||||||||||||||||||  | ||| ||||||||| |||||||||| ||||| |||| ||||||||| |    
T  44473852 tttgctagaagatatctttataaaaattagttggtgtcttttaacaaatactcatacaataacttgctaaaagacaccttcatgaaagatgtcttctaac 44473753  T
Q  143 aaaac 147  Q
    |||||    
T  44473752 aaaac 44473748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 41624679 - 41624737
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggt 77  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  41624679 tgatttttactttttagttataactttgttaaaagacaccttcgtaaaatttagttggt 41624737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 10775994 - 10775933
Alignment:
Q  76 gtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtctt 137  Q
    ||||||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||||    
T  10775994 gtgtcttttaaaaaatgtcaataggataacttgctaaaaggcactttcataaaaggtgtctt 10775933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 39589973 - 39590014
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39589973 cactttttagttataactttgctaaaagacaccttcataaaa 39590014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 16645508 - 16645556
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  16645508 tgatttccactttttagttataactttactaaaagacaccttcataaaa 16645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 3210897 - 3210943
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  3210897 atttccactttttaattataactttgctaaaagacaccttcataaaa 3210943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 39077208 - 39077162
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  39077208 atttccactttttagttataactttgctaaaagacacattcataaaa 39077162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 14371613 - 14371658
Alignment:
Q  100 aataacttgttaaaagacactttcataaaaggtgtcttctagcaaa 145  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  14371613 aataacttgctaaaagacaccttcataaaaggtgtcttctagcaaa 14371658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 1201684 - 1201632
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  1201684 actttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 1201632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 32069037 - 32068985
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  32069037 actttttagttatatctttgctaaaacacaccttaataaaaactagttggtgt 32068985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 16645537 - 16645575
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16645537 taaaagacaccttcataaaaggtgtcttctagcaaaacc 16645575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 39589995 - 39590033
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  39589995 taaaagacaccttcataaaaggtgtcttctagcaaaacc 39590033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 3210924 - 3210961
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3210924 taaaagacaccttcataaaaggtgtcttctagcaaaac 3210961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 40301412 - 40301372
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  40301412 cactttttagttataactt-gctaaaagacaccttcataaaa 40301372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 2823783 - 2823835
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| |||| || |||||||||||| |||||    
T  2823783 actttttagttatatctttgctaaaacacactttaataaaaattagtgggtgt 2823835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 10616306 - 10616254
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  10616306 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 10616254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 17691230 - 17691178
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||||||||| ||||||| |||||||||||| |||||    
T  17691230 actttttagttatatttttgctaaaacacaccttaataaaaattagtgggtgt 17691178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 39922456 - 39922508
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  39922456 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 39922508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 184121 - 184075
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  184121 actttttagttatatctttgctaaaacacaccttaataaaaactagt 184075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 7977283 - 7977329
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    ||||||||||||||  |||||||||| ||||||| ||||||||||||    
T  7977283 actttttagttatatatttgctaaaacacaccttaataaaaattagt 7977329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 26630044 - 26629998
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  26630044 actttttagttatatctttgctaaaacacaccttaataaaaactagt 26629998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 34103015 - 34102974
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaa 68  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  34103015 actttttagttatatctttgctaaaacacaccttaataaaaa 34102974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 42556979 - 42556946
Alignment:
Q  30 ttttagttataactttgctaaaagacaccttcat 63  Q
    |||||||||||| |||||||||||||||||||||    
T  42556979 ttttagttataattttgctaaaagacaccttcat 42556946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 13269269 - 13269340
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatag 99  Q
    |||||||||||||||| ||||||||| ||||||||  |||||| ||| ||||| || || |||||||| ||||    
T  13269269 actttttagttataac-ttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtttatag 13269340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 26868105 - 26868157
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||| || ||||||||||| ||||||| ||||||| |||| |||||    
T  26868105 actttttagttttatctttgctaaaacacaccttaataaaaactagtgggtgt 26868157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 27545775 - 27545723
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| || |||| ||||||| |||| |||||    
T  27545775 actttttagttatatctttgctaaaacacgccttaataaaaactagtgggtgt 27545723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 29126166 - 29126206
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||||||||||| ||||||||||| ||||||| ||||||    
T  29126166 actttttagttatatctttgctaaaacacaccttaataaaa 29126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 36899752 - 36899700
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| |||| |||||| ||||||| ||||||| |||| |||||    
T  36899752 actttttagttatatctttactaaaacacaccttaataaaaactagtaggtgt 36899700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 42556697 - 42556645
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||| | ||||||| |||| |||||    
T  42556697 actttttagttatatctttgctaaaacacaccctaataaaaactagtgggtgt 42556645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 39089127 - 39089257
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39089127 atgatttccattttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 39089226  T
Q  118 actttcataaaaggtgtcttctagcaaaacc 148  Q
    || |||||||||||||||||||| |||||||    
T  39089227 acattcataaaaggtgtcttctaacaaaacc 39089257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 18924564 - 18924692
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  18924564 tgatttccactttttagttataactttgctaaaggacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaagaca 18924663  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | |||||||||||||||||||||||||||    
T  18924664 ccttcataaaaggtgtcttctagcaaaac 18924692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 42090543 - 42090415
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  42090543 tgattttcattttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataatttgctaaaagaca 42090444  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||||||||||||| ||||||||    
T  42090443 ctttcataaaaggtgtcttccagcaaaac 42090415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 29471659 - 29471788
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||||    
T  29471659 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgttcatagaataacttgctaaaagaca 29471758  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  29471759 ccttcataaaaggtgtcttctagcaaaacc 29471788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 1749945 - 1750072
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacact 120  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||     
T  1749945 atttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataacctgctaaaagacacc 1750044  T
Q  121 ttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||| ||||||||||||||||||    
T  1750045 ttcataaaatgtgtcttctagcaaaacc 1750072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 9548235 - 9548364
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  9548235 tgatttccactttttagttataacttcgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 9548334  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||| |||||| ||||||||||    
T  9548335 ccttcataaaagatgtcttatagcaaaacc 9548364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 12725742 - 12725870
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||| |||||||||    
T  12725742 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagtaaatgctcatagaataacttgctaaaagaca 12725841  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
      || ||||||||||||||||||||||||    
T  12725842 tctttataaaaggtgtcttctagcaaaac 12725870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 10664716 - 10664843
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  10664716 tgatttccactttttagttataactttgctaaaagacgccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 10664815  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||| ||||||| ||||||||    
T  10664816 ccttcataaaatgtgtcttatagcaaaa 10664843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 33740363 - 33740234
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||| |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||| |||||||| |||||||||    
T  33740363 tgatattcactttctagttataactttgctaaaagacacatttataaaaattagttggtgtcttttaagaaatgtcaataggataacttgctaaaagaca 33740264  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||| ||||||    
T  33740263 ccttcataaaaggtgtcttctagtaaaacc 33740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 21950769 - 21950650
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| | ||||||||||||| ||||||||    
T  21950769 atgattttcactttttagttataactttgctaaaagacacattcataaatattagttggtgttttttaacaaatgctcatagaataacttgctaaaagac 21950670  T
Q  118 actttcataaaaggtgtctt 137  Q
    || |||||||||| ||||||    
T  21950669 accttcataaaagatgtctt 21950650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 24314343 - 24314214
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||| |||||||||    
T  24314343 tgatttccacattttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcataaaataatttgctaaaagaca 24314244  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | || ||||||||||| || ||||||||||    
T  24314243 cctttataaaaggtgtattttagcaaaacc 24314214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 16719762 - 16719881
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    |||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||| || || |||||||| | |||||||||| ||||||||    
T  16719762 tttttagtgataactttactaaaagacaccttcataaaaattagtttgtgtcttttaacaaatattcatggaataactagctaaaagacaccttcataaa 16719861  T
Q  129 aggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||    
T  16719862 aggtgtcttctagcaaaacc 16719881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 2969684 - 2969794
Alignment:
Q  30 ttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||||| |  ||| ||    
T  2969684 ttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttaacaaatgtcaatagaataattttttaaaagacacatgtatagaa 2969783  T
Q  130 ggtgtcttcta 140  Q
    |||||||||||    
T  2969784 ggtgtcttcta 2969794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 44539878 - 44539996
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaat-agaataacttgttaaaagacactttcataa 127  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||| |||| ||||| |||||||    
T  44539878 tttttagttataactttgctaaaatacaccttcataaaaattagttggtatcttttaacaaatgccaataagaataacttgctaaatgacaccttcataa 44539977  T
Q  128 aaggtgtcttctagcaaaa 146  Q
    ||| ||||||||| |||||    
T  44539978 aagatgtcttctaacaaaa 44539996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 39434984 - 39435084
Alignment:
Q  47 ctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||  |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  39434984 ctaaaagacatcttcataaaaattagttagtgtattttaacaaatgtctataggaaaacttgttaaaagacactttcataaaaggtgtcttctagcaaaa 39435083  T
Q  147 c 147  Q
    |    
T  39435084 c 39435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 4206553 - 4206430
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaat---agaataacttgttaaaagacacttt 122  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||| ||||||| |||   || |||||||| |||||||||| ||    
T  4206553 cactttttagttataactt-gctaaaagacacattcataaaaattagttggtttctgttagcaaatgtcaataggaggataacttgctaaaagacacctt 4206455  T
Q  123 cataaaaggtgtcttctagcaaaac 147  Q
    ||||||| |||||||||||||||||    
T  4206454 cataaaatgtgtcttctagcaaaac 4206430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 12895457 - 12895372
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataa 104  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  12895457 tgattttcactttttagttatagcattgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataa 12895372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 39961572 - 39961691
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    ||||||||||||||| |||| |||||||||||||| | |||||||||| || |||||||||||||||  ||   ||||||||||||||||||| ||||||    
T  39961572 actttttagttataa-tttgataaaagacaccttcgtgaaaattagtttgtatcttttaacaaatgtctatgagataacttgttaaaagacaccttcata 39961670  T
Q  127 aaaggtgtcttctagcaaaac 147  Q
    ||| || ||||||||||||||    
T  39961671 aaatgtatcttctagcaaaac 39961691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 25810479 - 25810559
Alignment:
Q  68 attagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||| |||| |||||||||||| |||||||||||||||    
T  25810479 attagttggtgtcttttaacaaatgataatataataacttgctaaaaaacaccttcataaaaggtatcttctagcaaaacc 25810559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 25880699 - 25880575
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaat----gttaatagaataacttgttaaaagacacttt 122  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||| |  |||||| |||||    ||| |||  |||||||| ||||| |||| ||    
T  25880699 actttttagttataactt-gttaaaaaacaccttcataaaaattagttgatagcttttagcaaataaatgtttatatgataacttgctaaaaaacacctt 25880601  T
Q  123 cataaaaggtgtcttctagcaaaacc 148  Q
    ||||||| ||||||||||||||||||    
T  25880600 cataaaaagtgtcttctagcaaaacc 25880575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 6231287 - 6231240
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6231287 tgattttcactttttagttataactttgctaaaagacaccttcataaa 6231240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 2969673 - 2969625
Alignment:
Q  34 agttataactttgctaaaagacaccttcataaaaattagttggtgtctt 82  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2969673 agttataactttgctaaaagacaccttcataaaaattagtgggtgtctt 2969625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 5534322 - 5534387
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 92  Q
    |||||||| ||||||||||||||||| | |||||||||||||||| ||||| | ||||||||||||    
T  5534322 actttttaattataactttgctaaaaaataccttcataaaaattaattggtattttttaacaaatg 5534387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 10862643 - 10862595
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  10862643 tgatttccactttttagttataattttgctaaaagacaccttcataaaa 10862595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 34450382 - 34450334
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  34450382 tgatttccactttttatttataactttgctaaaagacaccttcataaaa 34450334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 34125582 - 34125699
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    ||||||||||||||  || |||||||||||| ||||||||||||| |||||||  |||||||||||   |||  |||||||| ||||||||||   ||||    
T  34125582 actttttagttataggtt-gctaaaagacacattcataaaaattacttggtgtaatttaacaaatgcctatatgataacttgctaaaagacac---cata 34125677  T
Q  127 aaaggtgtcttctagcaaaacc 148  Q
    || |||| |||||| |||||||    
T  34125678 aagggtgacttctaacaaaacc 34125699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 29511870 - 29511911
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  29511870 cactttttagttataattttgctaaaagacaccttcataaaa 29511911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 10862614 - 10862576
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  10862614 taaaagacaccttcataaaaggtgtcttctagcaaaacc 10862576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 29512261 - 29512311
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  29512261 tttttagttatatctttgctaaaacacaccttaataaaaattagtaggtgt 29512311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 36779841 - 36779879
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  36779841 tttttagttaaaactttgctaaaagacaccttcataaaa 36779879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 27175505 - 27175545
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  27175505 cactttttagttataactt-gctaaaagacaccttcataaaa 27175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 5601749 - 5601710
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  5601749 actttttagttataa-tttgctaaaagacaccttcataaaa 5601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 11675164 - 11675112
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  11675164 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 11675112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 14747383 - 14747431
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||| |||||| |||||| ||||| |||||||||||||||||||    
T  14747383 tgattttcattttttaattataattttgccaaaagacaccttcataaaa 14747431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 16513253 - 16513305
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  16513253 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 16513305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 27097100 - 27097052
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| |||||||||||||||||||| |||||  ||||||||||||||    
T  27097100 tgatttccactttttagttataactttcctaaataacaccttcataaaa 27097052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 34082579 - 34082527
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  34082579 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 34082527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 37169569 - 37169517
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  37169569 actttttagttatatctttgctaaaaaacaccttaataaaaactagtaggtgt 37169517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 27175517 - 27175560
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaa 144  Q
    |||||||| |||||||||| ||||||||| ||||||||||||||    
T  27175517 ataacttgctaaaagacaccttcataaaatgtgtcttctagcaa 27175560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 13002204 - 13002250
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  13002204 actttttagttatatctttgctaaaacacaccttaataaaaactagt 13002250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 33471477 - 33471431
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||| |||||||||| ||||||||||  |||||||||||||||    
T  33471477 ataacttgctaaaagacacattcataaaagacgtcttctagcaaaac 33471431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 6231258 - 6231221
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  6231258 taaaagacaccttcataaatggtgtcttctagcaaaac 6231221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 14747413 - 14747450
Alignment:
Q  111 aaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  14747413 aaaagacaccttcataaaagatgtcttctagcaaaacc 14747450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 22594096 - 22594141
Alignment:
Q  44 ttgctaaaagacaccttcataaaaattagttggtgtcttttaacaa 89  Q
    |||||||||  | |||||||||||||||||||||||||| ||||||    
T  22594096 ttgctaaaaatccccttcataaaaattagttggtgtcttctaacaa 22594141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 33739559 - 33739518
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaa 68  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  33739559 actttttagttatatctttgctaaaacacaccttaataaaaa 33739518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 36779860 - 36779897
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  36779860 taaaagacaccttcataaaaggtgtcttctaggaaaac 36779897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 768727 - 768779
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||||||||| ||||||| ||||||| |||| |||||    
T  768727 actttttagttatatttttgctaaaacacaccttaataaaaactagtgggtgt 768779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 1576665 - 1576613
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| |||| |||||| ||||||| ||||||| |||| |||||    
T  1576665 actttttagttatatctttactaaaacacaccttaataaaaactagtgggtgt 1576613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 4293402 - 4293450
Alignment:
Q  42 ctttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaa 90  Q
    ||||||||||| || ||| ||||||||||||| ||||| ||||||||||    
T  4293402 ctttgctaaaacactcctacataaaaattagtgggtgtgttttaacaaa 4293450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 8386709 - 8386657
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| || |||| |||| |||||    
T  8386709 actttttagttatatctttgctaaaacacaccttaatgaaaactagtgggtgt 8386657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 23387309 - 23387361
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||| |||| |||||    
T  23387309 actttttagttatatctttgttaaaacacaccttaataaaaactagtgggtgt 23387361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 148
Target Start/End: Complemental strand, 27097065 - 27097033
Alignment:
Q  116 acactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||| ||||||||||||||||||||||||||||    
T  27097065 acaccttcataaaaggtgtcttctagcaaaacc 27097033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 32601403 - 32601351
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||| |||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  32601403 acttttttgttatatctttgctaaaacacaccttaataaaaactagtgggtgt 32601351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 34450353 - 34450317
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  34450353 taaaagacaccttcataaaatgtgtcttctagcaaaa 34450317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 41528078 - 41528130
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||| ||||| ||||||| |||||||||||| |||||    
T  41528078 actttttagttatatttttgttaaaacacaccttaataaaaattagtgggtgt 41528130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 21993598 - 21993471
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  21993598 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaaaaaatgctaatagaataacttgctaaaagaca 21993499  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||| ||||||||||||||||    
T  21993498 ccttcataaaatgtgtcttctagcaaaa 21993471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 45100099 - 45099970
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||    
T  45100099 tgatttacactttttagttgtaactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcattgaataacttgttaaaaaaca 45100000  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  45099999 ccttcataaaatgtgtcttctagcaaaacc 45099970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 5995090 - 5995209
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||||    
T  5995090 tttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatataataacttgctaaaagacactttcataaa 5995189  T
Q  129 aggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||    
T  5995190 aggtgtcttctagcaaaacc 5995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 3961303 - 3961178
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacact 120  Q
    ||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  3961303 attttcaatttttagttataattttgctaaaaaacaccttaataaaaattagttggtgtcttttaacaaatgatcatagaataacttgctaaaagacact 3961204  T
Q  121 ttcataaaaggtgtcttctagcaaaa 146  Q
    ||||||||| ||||||||||||||||    
T  3961203 ttcataaaatgtgtcttctagcaaaa 3961178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 35983235 - 35983106
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| | ||||||||||||| |||||||||    
T  35983235 tgattttcactttttagttataactttgctaaaagataccttcataaaaattaattggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 35983136  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
      ||||||||| ||||||||||||||||||    
T  35983135 tcttcataaaatgtgtcttctagcaaaacc 35983106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 36004647 - 36004518
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| | ||||||||||||| |||||||||    
T  36004647 tgattttcactttttagttataactttgctaaaagataccttcataaaaattaattggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 36004548  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
      ||||||||| ||||||||||||||||||    
T  36004547 tcttcataaaatgtgtcttctagcaaaacc 36004518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 41378398 - 41378527
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| ||||| |||    
T  41378398 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttagcaaatgttcatagaataacttgctaaaaaaca 41378497  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | || |||||| ||||||||||||||||||    
T  41378498 ccttaataaaaagtgtcttctagcaaaacc 41378527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 43077520 - 43077649
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||    
T  43077520 tgatattcattttttagttataactttgctaaaagaaaccttgataaaaattagttggtgtcttttaacaaatgtcaatagaaaaacttgctaaaaaaca 43077619  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  43077620 ccttcataaaaggtgtcttctagcaaaacc 43077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 48227258 - 48227387
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||| |||| ||||| |||    
T  48227258 tgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaataca 48227357  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||||||||||| |||||||||    
T  48227358 ccttcataaaaggtgtcttccagcaaaacc 48227387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 3203314 - 3203447
Alignment:
Q  19 tgattttcactttttagttataactttgcta----aaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaa 114  Q
    ||||||||||||||||||||||| |||||||    |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||    
T  3203314 tgattttcactttttagttataaatttgctagctaaaagacaccttcataaaaattagttggtgtctttaaacaaatgctcatagaataacttgctaaaa 3203413  T
Q  115 gacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||| |||||||||||| |||||||||||||||    
T  3203414 gacaccttcataaaaggtatcttctagcaaaacc 3203447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 31953287 - 31953158
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||| |||||||||    
T  31953287 tgatttccactttttagttataactttgttaaaaaacaccttcataaaaattaattgatgtcttttaacaaatgctcatagactaacttgctaaaagaca 31953188  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||||||| |||||||||||||    
T  31953187 ccttcataaaaggtgtgttctagcaaaacc 31953158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 46003761 - 46003889
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg-ttaatagaataacttgttaaaagacac 119  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| || ||||| ||||||| ||||||||||    
T  46003761 attttcactttttagttataactttgctaaaagacacctttataaaaattagttgatgtcttttagcaaatgcttcatagagtaacttgctaaaagacac 46003860  T
Q  120 tttcataaaaggtgtcttctagcaaaacc 148  Q
     ||||| ||| ||||||||||||||||||    
T  46003861 cttcatgaaatgtgtcttctagcaaaacc 46003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 41037253 - 41037127
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| | ||||||||| ||  |||||||||    
T  41037253 tgatttccactttttagttataactttgctaaaagacaccttcataaaacttagtttgtgtcttttaccaaatgctcatagaataatttactaaaagaca 41037154  T
Q  119 ctttcataaaaggtgtcttctagcaaa 145  Q
    | |||||||||||||||||||| ||||    
T  41037153 ccttcataaaaggtgtcttctaacaaa 41037127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 42373493 - 42373614
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||| ||| |||||||||| |||||    
T  42373493 cactttttagttagaactt-gctaaaagacatcttcataaaaattaattggtgtcttttaacaaatgtcaataggataatttgctaaaagacacattcat 42373591  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||||||    
T  42373592 aaaaggtgtcttctagcaaaacc 42373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 35221700 - 35221825
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgtt-----aatagaataacttgttaaaagacactt 121  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     |||||||||||||| |||||||||| |    
T  35221700 actttttagttataacttagctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaatagaataacttgctaaaagacacct 35221799  T
Q  122 tcataaaaggtgtcttctagcaaaac 147  Q
    |||||||| || ||||||||||||||    
T  35221800 tcataaaaagtatcttctagcaaaac 35221825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 38368277 - 38368159
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||| |||| |||||||||| ||||||||    
T  38368277 tttttagttataactt-gctaaaatacaccttcataaaaattagttggtgtcttttagcaaatgttaatatgatatcttgctaaaagacacattcataaa 38368179  T
Q  129 aggtgtcttctagcaaaacc 148  Q
    ||||||||||||||| ||||    
T  38368178 aggtgtcttctagcataacc 38368159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 41585906 - 41586002
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaag 115  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  41585906 tgatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataacctgctaaaag 41586002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 27131116 - 27130996
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||   |||  |||||||| ||||| |||| ||||||    
T  27131116 actttttagttataactt-gctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataagataacttgctaaaaaacaccttcata 27131018  T
Q  127 aaaggtgtcttctagcaaaacc 148  Q
    || |||||||||||||||||||    
T  27131017 aagggtgtcttctagcaaaacc 27130996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 24611544 - 24611437
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||| | | ||||||||||| |||||||||    
T  24611544 tgattttcactttttagttataactttgttaaaagacactttcataaaaattagttggtatcttttaataaatgctcagagaataacttgctaaaagaca 24611445  T
Q  119 ctttcata 126  Q
    | ||||||    
T  24611444 ccttcata 24611437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 12362868 - 12362980
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||| |||||| |||| ||||||||| ||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  12362868 actttttaattataa-tttgttaaaagacatcttcataaaaatttgttgatgtcttttaacaaatgtctatagaataacttgttaaaagacacattcata 12362966  T
Q  127 aaaggtgtcttcta 140  Q
    || |||||||||||    
T  12362967 aagggtgtcttcta 12362980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 27946861 - 27946978
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||    ||||||||||||| |||||||||| | ||||||    
T  27946861 tttttagttataa-tttgttaaaagacaccttcataaaaattagttggtgtgttttaacaaatagctatagaataacttgctaaaagacacctccataaa 27946959  T
Q  129 aggtgtcttctagcaaaac 147  Q
      |||||||||||||||||    
T  27946960 gagtgtcttctagcaaaac 27946978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 20568379 - 20568259
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaa-ttagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttca 124  Q
    |||||||||||||||| ||||||| |||||||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||||| |||||||||| ||||    
T  20568379 cactttttagttataa-tttgctacaagacaccttgataaaaaattacttggtgtcttttagcaaatgttaataggataacttgctaaaagacacattca 20568281  T
Q  125 taaaaggtgtcttctagcaaaa 146  Q
    |||| ||||| |||||| ||||    
T  20568280 taaagggtgttttctagaaaaa 20568259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 24251948 - 24251831
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| |||||| | |||| |||||||| |  || |||| ||||||    
T  24251948 actttttagttataactt-gttaaaagacaccttcataaaaattaattggtgtcttttagcaaatgcttataggataacttgct--aatacaccttcata 24251852  T
Q  127 aaaggtgtcttctagcaaaac 147  Q
    |||||||||||||||||||||    
T  24251851 aaaggtgtcttctagcaaaac 24251831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 9522493 - 9522619
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||  ||||  |  |||| ||||||| |||||||||    
T  9522493 tgatttccactttttagttataactttgataaaagacacct---taaaaattagttggtgtcttttaggaaatcctcgtagattaacttgctaaaagaca 9522589  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
      ||||||||| ||||||||||||||||||    
T  9522590 tcttcataaaatgtgtcttctagcaaaacc 9522619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 26927992 - 26928054
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtct 81  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26927992 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtct 26928054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 3875189 - 3875108
Alignment:
Q  65 aaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||  ||||||||||||||| |||| |||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  3875189 aaaattagttggt--cttttaacaaatgtttataggataacttgctaaaatacactttcataaaatgtgtcttctagcaaaacc 3875108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 3350041 - 3350104
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctt 82  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  3350041 tgatttccactttttagttataattttgctaaaagacaccttcattaaaagtagttggtgtctt 3350104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 48709070 - 48709156
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaa 113  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||   |||| |||||||| ||||    
T  48709070 cactttttagtaataactt-gctaaaagacaccttcataaaaattagttagtgtcttttagcaaatgcctataggataacttgctaaa 48709156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 28333790 - 28333835
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcata 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28333790 tgattttcactttttagttataactttgctaaaagacaccttcata 28333835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14656582 - 14656530
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaatta 71  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  14656582 tgattttcaccttttagttataactttgttaaaagacaccttcataaaaatta 14656530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 36343088 - 36343021
Alignment:
Q  62 ataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaa 129  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||  |||||||||    
T  36343088 ataaaaattagttggtgtcttttaacaaatgctcataaaataacttgttaaaaaacatcttcataaaa 36343021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 20009208 - 20009256
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  20009208 tgatttttactttttagttataactttgttaaaagacaccttcataaaa 20009256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 48624973 - 48625021
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||    
T  48624973 tgatttccattttttagttataactttgctaaaagacaccttcataaaa 48625021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 32392287 - 32392332
Alignment:
Q  103 aacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  32392287 aacttgctaaaagacaccttcataaaaggtgtcttctagcaaaacc 32392332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 9401669 - 9401617
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  9401669 actttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 9401617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 6559539 - 6559589
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  6559539 tttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 6559589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 3407179 - 3407227
Alignment:
Q  24 ttcactttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  3407179 ttcactttttagttataactt-gctaaaagacagcttcataaaaactagt 3407227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 20417981 - 20418026
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||||    
T  20417981 ataatttgctaaaagacacattcataaaaggtgtcttctagcaaaa 20418026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 32392272 - 32392313
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  32392272 cactttttagttataaacttgctaaaagacaccttcataaaa 32392313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 42090320 - 42090235
Alignment:
Q  62 ataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| |||||||||||||  ||||||  |||| |||| ||| ||||| ||| ||| ||||||||| ||||||| ||||||    
T  42090320 ataaaaattaattggtgtcttttagtaaatgtctataggataatttgctaaaaaacatttttataaaaggtatcttctaacaaaac 42090235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 939078 - 939130
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  939078 actttttagttatatctttgctaaaacacaccttaataaaaagtagtgggtgt 939130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 19069579 - 19069631
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| |||| |||||| ||||||| ||||||| ||||||||||    
T  19069579 actttttagttatatctttactaaaacacaccttaataaaaactagttggtgt 19069631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 25818668 - 25818720
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  25818668 actttttagttatatctttgctaaaacacaccttaataaaaactagtaggtgt 25818720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 28912265 - 28912317
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  28912265 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 28912317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 44868036 - 44868091
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctt 82  Q
    ||||||||||||||||||| | ||||| |||| ||||||||||||||| ||||||||    
T  44868036 cactttttagttataactt-gttaaaaaacactttcataaaaattagtgggtgtctt 44868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 2509334 - 2509288
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||||    
T  2509334 actttttagttatatctttgctaaaacacaccttaatagaaattagt 2509288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 14313998 - 14313952
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||| |||||||||| |||||||||||| ||||||| ||||||    
T  14313998 ataacttgctaaaagacaccttcataaaaggtatcttctaacaaaac 14313952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 15957227 - 15957181
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  15957227 actttttagttatatctttgctaaaacacaccttaataaaaactagt 15957181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 28059314 - 28059379
Alignment:
Q  81 ttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    ||||| |||||| | ||||||||||||  |||||||  ||| |||||||||||||||||||||||||    
T  28059314 ttttagcaaatgctcatagaataacttcctaaaagatcctt-cataaaaggtgtcttctagcaaaac 28059379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 48625002 - 48625040
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  48625002 taaaagacaccttcataaaaggtgtcttatagcaaaacc 48625040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 7596914 - 7596953
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaa 66  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  7596914 cactttttagttataa-tttgttaaaagacaccttcataaa 7596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 11766304 - 11766356
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||| ||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  11766304 actttttaattatatctttgctaaaatacaccttaataaaaactagtgggtgt 11766356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 20009233 - 20009273
Alignment:
Q  106 ttgttaaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  20009233 ttgttaaaagacaccttcataaaatgtgtcttatagcaaaa 20009273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 28333819 - 28333855
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    |||||||||| |||||| |||||||||||||||||||    
T  28333819 taaaagacaccttcatacaaggtgtcttctagcaaaa 28333855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 3e-53; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 23204505 - 23204376
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  23204505 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatgctcatagaataacttgttaaaagaca 23204406  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||| |||||||||||||||||    
T  23204405 ccttcataaaagatgtcttctagcaaaacc 23204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 28038237 - 28038363
Alignment:
Q  22 ttttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactt 121  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| | ||||||||||||| ||||||||||||    
T  28038237 ttttcactttttagttataactttactaaaagacaccttcataaaaattagttggtgtgttttagcaaatgctcatagaataacttgctaaaagacactt 28038336  T
Q  122 tcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||| ||||||||||||||||||    
T  28038337 tcataaaatgtgtcttctagcaaaacc 28038363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 19323737 - 19323859
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| || |||||||| |||||||||| |||||    
T  19323737 cactttttagttataactttgctaaaagacactttcataaaaattaattggtgtcttttaacaaatgctaaaaggataacttgctaaaagacaccttcat 19323836  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||||||    
T  19323837 aaaaggtgtcttctagcaaaacc 19323859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 9741854 - 9741725
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| | ||||||||| |||||||||||||    
T  9741854 tgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgttttttagcaaatgctcatagaataatttgttaaaagaca 9741755  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  9741754 ccttcataaaatgtgtcttctagcaaaacc 9741725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 16994169 - 16994298
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||  |||    
T  16994169 tgatttgcactttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaacaaca 16994268  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  16994269 ccttcataaaatgtgtcttctagcaaaacc 16994298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 37172422 - 37172551
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||||||    
T  37172422 tgattttcactttttagttataatttttctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcgtagaataacttgttaaaagaca 37172521  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||| |||||||| |||||    
T  37172522 ccttcataaaaggtgacttctagccaaacc 37172551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 18015771 - 18015643
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||    
T  18015771 tgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgtcttttaacaaatgttcatgcaataacttgctaaaagaca 18015672  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||| |||||||| ||||||||||||    
T  18015671 ccttcatataaggtgtc-tctagcaaaacc 18015643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 38758651 - 38758779
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| | |||| | ||||||||||||| |||||||||    
T  38758651 tgattttcactttttagttataactttgttaaaagacacctttataaaaatcagttggtgtcttttagc-aatgctcatagaataacttgctaaaagaca 38758749  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  38758750 ccttcataaaatgtgtcttctagcaaaacc 38758779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 20269362 - 20269235
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||| |||||||||    
T  20269362 tgatttccactttttagttataattttattaaaagacaccttcataaaaattaattgttgtcttttagcaaatgttcatagaataacttgctaaaagaca 20269263  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | |||||||||| |||||||||||||||    
T  20269262 ccttcataaaagctgtcttctagcaaaa 20269235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 27365835 - 27365716
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||||||||||||| ||||||||||||||| ||||||  ||| ||||||||||||||||||| | ||||||||||||| |||||||||| ||||||    
T  27365835 actttttagttataactt-gctaaaagacacctttataaaacctaggtggtgtcttttaacaaatgctcatagaataacttgctaaaagacaccttcata 27365737  T
Q  127 aaaggtgtcttctagcaaaac 147  Q
    |||||||||||||||||||||    
T  27365736 aaaggtgtcttctagcaaaac 27365716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 17689369 - 17689497
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||| |  |||||||||    
T  17689369 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattag-tggtgtcttttagcaaatgctcatagaataacctactaaaagaca 17689467  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
      || |||||| |||||||||| |||||||    
T  17689468 tctttataaaatgtgtcttctaacaaaacc 17689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 38293508 - 38293616
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaa-caaatgttaatagaataacttgttaaaagac 117  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  38293508 tgatttccactttttagttataactttgttaaaagacacgttcataaaaattagttggtgtcttttaataaaatgctcatagaataacttgttaaaagac 38293607  T
Q  118 actttcata 126  Q
    || ||||||    
T  38293608 accttcata 38293616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 28813088 - 28813218
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| | |||||||| |||| ||||| |||    
T  28813088 tgatttccactttttagttataactttgctaaaagacgcctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaaca 28813187  T
Q  119 ctttcata-aaaggtgtcttctagcaaaacc 148  Q
      |||||| ||| ||||||| ||||||||||    
T  28813188 tcttcatacaaatgtgtcttttagcaaaacc 28813218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 148
Target Start/End: Original strand, 16273620 - 16273724
Alignment:
Q  44 ttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagca 143  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||  |||  |||||||| |||||||||| |||||||| ||||||||||||||    
T  16273620 ttgctaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgtctataagataacttgctaaaagacaccttcataaagggtgtcttctagca 16273719  T
Q  144 aaacc 148  Q
    |||||    
T  16273720 aaacc 16273724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 19325067 - 19325166
Alignment:
Q  19 tgattttcactttttagttataa-ctttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||||||    
T  19325067 tgatttccactttttagttataaactttgctaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcatagaataacttgctaaaagac 19325166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 26730335 - 26730407
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26730335 tgattttcactttt-agttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 26730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 15978931 - 15978804
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||| ||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| |||||  | ||||| ||| ||| |||||||||    
T  15978931 tgatttttactttttagttataattttgttaaaagacacttttataaaaattagttggtgtcttttagcaaatactcatagattaatttgctaaaagaca 15978832  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||| |||||| ||| |||||    
T  15978831 ccttcataaaatgtgtctcctaccaaaa 15978804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 13960415 - 13960536
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| | |||||||||| |||| |   |||| |||||||| |||||||||| |||||    
T  13960415 cactttttagtcataaacttgctaaaagacaccttcataaaaattagct-gtgtcttttagcaaaggcctataggataacttgctaaaagacaccttcat 13960513  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||| |||||||||||| |||||    
T  13960514 aaaaagtgtcttctagcgaaacc 13960536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 19995404 - 19995319
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataactt 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||| | ||||||||||||    
T  19995404 tgatttccactttttagttataactttgctaaaagacaccttcat---aattagttggtgttttttaacaaatgctcatagaataactt 19995319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 31042562 - 31042674
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||   |||  |||||||| ||||| |||| ||||||    
T  31042562 acttttttgttataactt-gctaaaagacactttaataaaaattagttggtgtcttttaacaaatgcctataagataacttgctaaaatacaccttcata 31042660  T
Q  127 aaaggtgtcttcta 140  Q
    || |||||||||||    
T  31042661 aagggtgtcttcta 31042674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 31056411 - 31056531
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||   |||||   |||   ||||||| ||||| |||| ||||||    
T  31056411 actttttaattataactt-gctaaaagacactttaataaaaattagttggtgtcttttcggaaatgcctataagttaacttgctaaaatacaccttcata 31056509  T
Q  127 aaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||||    
T  31056510 aaaggtgtcttctagcaaaacc 31056531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 16490949 - 16490997
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16490949 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 16490997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 33429221 - 33429301
Alignment:
Q  68 attagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||| ||||||||||| | |||||| | ||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||    
T  33429221 attaattggtgtctttcagcaaatgctcatagaataacttgctaaaaggcaccttcataaaatgtgtcttctagcaaaacc 33429301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 5497782 - 5497839
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctttta 85  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  5497782 actttttagttataactt-gctgaaagacactttcataaaaattagttggtgtctttta 5497839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 21913836 - 21913905
Alignment:
Q  79 tcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||| ||||||   |||| |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  21913836 tcttttagcaaatgcctataggataacttgctaaaagacaccttcataaagggtgtcttctagcaaaacc 21913905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 17232931 - 17232879
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  17232931 actttttagttatatctttgctaaaatacaccttaataaaaattagtaggtgt 17232879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 4083905 - 4083957
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  4083905 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 4083957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 4738099 - 4738151
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  4738099 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 4738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 6436590 - 6436642
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  6436590 actttttagttatatctttgctaaaatacaccttaataaaaactagtgggtgt 6436642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 7944454 - 7944506
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  7944454 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 7944506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 17210182 - 17210234
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  17210182 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 17210234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 17233289 - 17233237
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||||| |||||    
T  17233289 actttttagttatatcttttctaaaacacaccttaataaaaattagtaggtgt 17233237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 19994617 - 19994565
Alignment:
Q  96 atagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||| |||||||||  ||| ||||| ||||||||||||||||||    
T  19994617 atagaataacttgctaaaagacatgttcttaaaatgtgtcttctagcaaaacc 19994565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 28747930 - 28747982
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  28747930 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 28747982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 33832885 - 33832937
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||||||||| ||||||| |||||||||||| |||||    
T  33832885 actttttagttatatttttgctaaaacacaccttaataaaaattagtgggtgt 33832937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 15388222 - 15388269
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||| |||||||||| || ||||||||||| |||||||||||||    
T  15388222 ataacttgctaaaagacacatttataaaaggtgtgttctagcaaaacc 15388269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 23129647 - 23129694
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||| ||||||||| |||| ||||| |||||||    
T  23129647 ataacttgttaaaagacaccttcataaaatgtgtattctaacaaaacc 23129694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 16490776 - 16490814
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  16490776 taaaagacatcttcataaaaggtgtcttctagcaaaacc 16490814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 19863159 - 19863205
Alignment:
Q  102 taacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||| |||| |||| |||||||| |||||||||    
T  19863159 taacttgttaaaagacaccttcacaaaaagtgtcttccagcaaaacc 19863205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 32736427 - 32736473
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  32736427 actttttagttatatctttgctaaaacacaccttaataaaaactagt 32736473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 14369934 - 14369986
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||| | ||||||| |||| |||||    
T  14369934 actttttagttatatctttgctaaaacacaccataataaaaactagtgggtgt 14369986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 17421861 - 17421913
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||||  |||| ||||| ||||||| |||||||||||| |||||    
T  17421861 actttttagttatatatttgttaaaacacaccttaataaaaattagtgggtgt 17421913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 33696220 - 33696272
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||| |||| |||||    
T  33696220 actttttagttatatctttgttaaaacacaccttaataaaaactagtgggtgt 33696272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 43126949 - 43127009
Alignment:
Q  87 caaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||| |||  |||||||| ||||| ||||||| ||||||| | ||||||||||||||    
T  43126949 caaatgtttataagataacttgctaaaaaacacttttataaaagatatcttctagcaaaac 43127009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 3e-53; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 54160517 - 54160388
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  54160517 tgattttcacttttttgttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgcttatagaataacttgctaaaagaca 54160418  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  54160417 ccttcataaaaggtgtcttctagcaaaacc 54160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 39328541 - 39328415
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||||||    
T  39328541 tgatttccactttttagttataactttgctaaaagacactttcataaaaattagttggtgtcttttaagaaatgtcaataggataacttgctaaaagaca 39328442  T
Q  119 ctttcataaaaggtgtcttctagcaaa 145  Q
    | |||||||||||||||||||||||||    
T  39328441 ccttcataaaaggtgtcttctagcaaa 39328415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 3283303 - 3283432
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  3283303 tgatttttactttttagttatagctttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 3283402  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  3283403 ccttcataaaatgtgtcttctagcaaaacc 3283432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 21395892 - 21396021
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| | ||||||||||||| ||||| |||    
T  21395892 tgattttcactttttagttataactttgctaaaagacacatttataaaatttagttggtgtcttttaacaaatgctcatagaataacttgctaaaaaaca 21395991  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  21395992 ccttcataaaaggtgtcttctagcaaaacc 21396021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 50090861 - 50090990
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  50090861 tgatttccactttttagttataattttgctaaaaaacactttcataaaaattagttggtgtctttcaccaaatgttaatagaataacttgctaaaagaca 50090960  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  50090961 ccttcataaaaggtgtcttctagcaaaacc 50090990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 36418835 - 36418713
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  36418835 cactttttaattataactttgctaaaagacaccttgataaaaaataattggtgtcttttaacaaatgtcaataggataacttgctaaaagacactttcat 36418736  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||||||    
T  36418735 aaaaggtgtcttctagcaaaacc 36418713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 9665438 - 9665309
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9665438 tgattttcactttttagttataactttgcaaaagaacaccttcataaaaattagttaatgtcttttaacaaatgttaatagaataacttgttaaaagaca 9665339  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||| |||||||||| || |||||||    
T  9665338 ccttcatagaaggtgtcttttaacaaaacc 9665309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 8674665 - 8674537
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||| | ||| ||||||||| |||||||||    
T  8674665 tgatttccactttttagttataactttgctaaaagacaccttcataaaaatcagttggtctgttttagcaaatgctcataaaataacttgctaaaagaca 8674566  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||||||||||||||||||||||    
T  8674565 ctttcataaaaggtgtcttctagcaaaac 8674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 45408375 - 45408247
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||| |||||||||    
T  45408375 tgatttccactttttagttataattttggtaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgctcatagaataacttgctaaaagaca 45408276  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||||||||| ||||||||||||    
T  45408275 ctttcataaaaggtgttttctagcaaaac 45408247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 37702608 - 37702730
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||  ||||| |||||||| |||||||||||||||     
T  37702608 cactttttagttataactttgctaaaaaacaccttcataaaaattagttggtgtctattagcaaatgccaataggataacttgctaaaagacactttcaa 37702707  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||||||    
T  37702708 aaaaggtgtcttctagcaaaacc 37702730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 54411823 - 54411952
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| | |||||||| |||| ||||| |||    
T  54411823 tgatttccactttttagttataactttgctaaaaaacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaaca 54411922  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  54411923 ccttcataaaaggtgtcttctagcaaaacc 54411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 52945698 - 52945571
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | || |||||||||| |||||||||    
T  52945698 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgccttttaccaaatgctcattgaataacttgctaaaagaca 52945599  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    ||||||||||| || ||||||||||||||    
T  52945598 ctttcataaaatgt-tcttctagcaaaac 52945571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 13700281 - 13700410
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| | | |||||||||| |||||| |||    
T  13700281 tgatttccactttttagttataactttgttaaaagataccttcataaaaattagttggtgtcttttagcaaatgctcaaagaataacttattaaaaaaca 13700380  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  13700381 ccttcataaaatgtgtcttctagcaaaacc 13700410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 19855593 - 19855464
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||| ||| |||||    
T  19855593 tgatttccactttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcgtagaataacttgctaatagaca 19855494  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||||| |||||| ||||||||    
T  19855493 ccttcataaaaggtttcttctcgcaaaacc 19855464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 54253826 - 54253955
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||| ||||| |||    
T  54253826 tgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaggaaatgctcatagaataacttgctaaaataca 54253925  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| | ||||||||||||||||    
T  54253926 ccttcataaaatgcgtcttctagcaaaacc 54253955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 34673375 - 34673485
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||    
T  34673375 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagaca 34673474  T
Q  119 ctttcataaaa 129  Q
    | |||||||||    
T  34673475 ccttcataaaa 34673485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 8351181 - 8351060
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| || |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  8351181 tgatttccattttttagttataactttgttaaaagacacattcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 8351082  T
Q  119 ctttcataaaaggtgtcttcta 140  Q
    | ||||||||| ||||||||||    
T  8351081 ccttcataaaaagtgtcttcta 8351060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 41355542 - 41355442
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||    
T  41355542 tgatttccactttttagttataactttgctataagacaccttcataaaaattagttggtgtcttttaacaaatgctcattgaataacttgttaaaagaca 41355443  T
Q  119 c 119  Q
    |    
T  41355442 c 41355442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 6125888 - 6125770
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||  |||||||| |||||||||| ||||||||    
T  6125888 tttttagttataactt-gctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgtctataagataacttgctaaaagacaccttcataaa 6125790  T
Q  129 aggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||    
T  6125789 atgtgtcttctagcaaaacc 6125770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 42092938 - 42092807
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaaga-caccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaaga 116  Q
    ||||||| || |||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||||||   | ||||||||||||| |||||||    
T  42092938 atgatttccattttttagttataactttgctaaaaaaacacctttataaaaattaattggtgtcttttaacaaagactcatagaataacttgctaaaaga 42092839  T
Q  117 cactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||| ||||||||||||||||||||||||||||    
T  42092838 caccttcataaaaggtgtcttctagcaaaacc 42092807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 20513062 - 20513180
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| | ||||||||| ||| |||||||||    
T  20513062 tgatttccactttttagttataactttgttaaaaaacaccttcataaaaattaattggtgtcttttaacaaatgctcatagaataaattgctaaaagaca 20513161  T
Q  119 ctttcataaaaggtgtctt 137  Q
    | ||||||||| |||||||    
T  20513162 ccttcataaaaagtgtctt 20513180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 34673524 - 34673625
Alignment:
Q  44 ttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagca 143  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  34673524 ttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcataaaaggtgtcttctagca 34673623  T
Q  144 aa 145  Q
    ||    
T  34673624 aa 34673625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 35711859 - 35711988
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||| |||||| | ||||||||||||| |||||||||    
T  35711859 tgatttccactttttagctatagctttgctaaaagacaccttcataaaagttagctggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 35711958  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    |  || ||||| ||||||||||||||||||    
T  35711959 ccctcgtaaaatgtgtcttctagcaaaacc 35711988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 38101220 - 38101331
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||| |||  ||||| |||    
T  38101220 tgatttccactttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttactaaaaaaca 38101319  T
Q  119 ctttcataaaag 130  Q
    | ||||||||||    
T  38101320 ccttcataaaag 38101331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 35280537 - 35280437
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| | ||| ||||||||| |||||||||    
T  35280537 tgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagtttgtatcttttaacaaatgctcatataataacttgctaaaagaca 35280438  T
Q  119 c 119  Q
    |    
T  35280437 c 35280437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 5232652 - 5232777
Alignment:
Q  26 cactttttagttataactttgctaaaaga---caccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacacttt 122  Q
    |||||||||||| |||||||||||| |||   |||||| ||||||||||||||||||||||||||||||| |  |||||||||||| |||| ||||| ||    
T  5232652 cactttttagttgtaactttgctaacagagtacacctttataaaaattagttggtgtcttttaacaaatgcttctagaataacttgctaaatgacacctt 5232751  T
Q  123 cataaaaggtgtcttctagcaaaacc 148  Q
    ||||||| ||||||| ||||||||||    
T  5232752 cataaaatgtgtcttgtagcaaaacc 5232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 27026670 - 27026753
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataa 104  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  27026670 atttccactttttagttataattttgctaaaagacaccttcctaaaaattagttggtgtcttttaacaaatgttaagagaataa 27026753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 4126102 - 4125996
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||| ||||||||||||||||||| || ||||||||||||| ||| ||||||||| |||||| | |||||||||||||||||||||||    
T  4126102 tgatttccactttttaattataactttgctaaaagatacattcataaaaattaattgatgtcttttagcaaatgctcatagaataacttgttaaaagaca 4126003  T
Q  119 ctttcat 125  Q
    | |||||    
T  4126002 ccttcat 4125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 11238787 - 11238690
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttca 124  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||| ||||    
T  11238787 actttttagttataactttgttaaaatacatcttcataaaaattagttgatgtcttttaacaaatgctcatagaataacttgctaaaagacaccttca 11238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 35180694 - 35180573
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||| ||||||||||| |||||||||  ||||||||||||| ||| ||| |||||||||||| ||||| |||||||| ||||||||||| ||||||    
T  35180694 actttttaattataactttgttaaaagacaatttcataaaaattaattgatgtattttaacaaatgctaataaaataactttttaaaagacaccttcata 35180595  T
Q  127 aaaggtgtcttctagcaaaacc 148  Q
    |||  | |||||||||||||||    
T  35180594 aaatatatcttctagcaaaacc 35180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 19228692 - 19228596
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaag 115  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||| ||||||    
T  19228692 tgattttcactttttaattataattttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataatttgctaaaag 19228596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 27038014 - 27038096
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaa 101  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  27038014 tgatttccactttttagttataattttgctaaaagacaccttcataaaaatgagttggtgtcttttaacaaatcttaacagaa 27038096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 34673462 - 34673547
Alignment:
Q  44 ttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaa 129  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||| |||||||||    
T  34673462 ttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcataaaa 34673547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 46354143 - 46354034
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtg-tcttttaacaaatgttaatagaataacttgttaaaagacac 119  Q
    ||||| ||||||||||||||| |||  |||||||||| |||||||||||||||||||| | |||||||||||  | ||| ||||||||||||||||||||    
T  46354143 atttttactttttagttataattttattaaaagacactttcataaaaattagttggtgtttttttaacaaatacttataaaataacttgttaaaagacac 46354044  T
Q  120 tttcataaaa 129  Q
    ||||||||||    
T  46354043 tttcataaaa 46354034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 39867131 - 39867230
Alignment:
Q  49 aaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||| ||| |||| ||||| ||||||||| || |||||||||||||||    
T  39867131 aaaagacaccttcataaaaattagttggtatcatttaagaaatgtttatagaataatttgataaatgacaccttcataaaatgtttcttctagcaaaacc 39867230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 52089164 - 52089066
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttca 124  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| ||||||  ||| ||||||||| |||||||||| ||||    
T  52089164 cactttttagttataaacttgctaaaagacaccttcataaatattagttggtgttttttaataaatgtctatacaataacttgctaaaagacaccttca 52089066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 21482016 - 21481947
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaa 90  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  21482016 atttccactttttagttataactttgttaaaagacaccttcataaaaattagctggtgtcttttagcaaa 21481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 53518908 - 53518973
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 92  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||    
T  53518908 actttttagttataactttgttaaaagacactttcataaaaattaattggtgtcttttaacaaatg 53518973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 36227911 - 36227811
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |   |||  |||||||| ||||| |||| ||||||    
T  36227911 actttttagttataactt-gctaaaagacaccttcataaaaattaattggtgtcttttagcaaacgcctataagataacttgctaaaaaacacattcata 36227813  T
Q  127 aa 128  Q
    ||    
T  36227812 aa 36227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 27432150 - 27432050
Alignment:
Q  43 tttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataactt-gttaaaagacactttcataaaaggtgtcttctag 141  Q
    |||||||||| |||||||||||||||||| |||||||||||||  |||||   ||||||||||||  | ||||||||  |||||||||| ||||||||||    
T  27432150 tttgctaaaaaacaccttcataaaaattatttggtgtcttttagtaaatgcccatagaataacttactaaaaagacatcttcataaaagatgtcttctag 27432051  T
Q  142 c 142  Q
    |    
T  27432050 c 27432050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 46969928 - 46969977
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  46969928 atgatttccactttttagttataattttgctaaaagacaccttcataaaa 46969977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 27027332 - 27027379
Alignment:
Q  100 aataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  27027332 aataacttgctaaaagacaccttcataaaaggtgtcttctagcaaaac 27027379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 4043973 - 4043919
Alignment:
Q  50 aaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataa 104  Q
    |||||| |||||||||||||||||||||||||||||||| ||| | |||||||||    
T  4043973 aaagacgccttcataaaaattagttggtgtcttttaacagatgctcatagaataa 4043919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 27418802 - 27418847
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  27418802 actttttagttataactt-gctaaaagacaccttcataaaaattagt 27418847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 53518910 - 53518868
Alignment:
Q  34 agttataactttgctaaaagacaccttcataaaaattagttgg 76  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  53518910 agttataactttgctaagagacaccttcataaaaattagttgg 53518868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 45408441 - 45408396
Alignment:
Q  39 taactttgctaaaagacaccttcataaaaattagttggtgtctttta 85  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||    
T  45408441 taactttgttaaaagacac-ttcataaaaattagttggtgtctttta 45408396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 46770541 - 46770495
Alignment:
Q  101 ataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||    
T  46770541 ataacttgctaaaagacaccttcataaagggtgtcttctagcaaaac 46770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 12127713 - 12127765
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| ||| |||||    
T  12127713 actttttagttatatctttgctaaaacacaccttaataaaaatcagtgggtgt 12127765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 17605645 - 17605697
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  17605645 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 17605697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 33837829 - 33837777
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  33837829 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 33837777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 50801746 - 50801798
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  50801746 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 50801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 50874134 - 50874082
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  50874134 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 50874082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 46770552 - 46770514
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaa 66  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  46770552 actttttagttataactt-gctaaaagacaccttcataaa 46770514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 8814952 - 8814998
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttg 75  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  8814952 tttttagttatatctttgctaaaatacaccttaataaaaactagttg 8814998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 8815162 - 8815208
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttg 75  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  8815162 tttttagttatatctttgctaaaatacaccttaataaaaactagttg 8815208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 13349307 - 13349353
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  13349307 actttttagttatatctttgctaaaacacaccttaataaaaactagt 13349353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 31039575 - 31039525
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  31039575 tttttagttatatctttgctaaaacacaccttaataaaaactagtaggtgt 31039525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 29239613 - 29239568
Alignment:
Q  28 ctttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  29239613 ctttttagttatatctttgctaaaacacaccttaataaaaactagt 29239568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 46969958 - 46969995
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  46969958 taaaagacaccttcataaaatgtgtcttctagcaaaac 46969995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 1376015 - 1375971
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||| ||||||||||| ||||||| |||||| |||||    
T  1376015 tttttagttatatctttgctaaaacacaccttaataaaatttagt 1375971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 3800369 - 3800421
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| | ||||||||| ||||||| ||||||| |||| |||||    
T  3800369 actttttagttatatcattgctaaaacacaccttaataaaaactagtgggtgt 3800421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 22894565 - 22894521
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  22894565 tttttagttatatctttgctaaaacacaccttaataaaaactagt 22894521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 51614648 - 51614688
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||| ||| |||||||||||||| ||||||    
T  51614648 actttttagttataattttactaaaagacacctttataaaa 51614688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 10075121 - 10074994
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  10075121 tgatttccactttttaattataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatattcataaaataacttgttaaaagaca 10075022  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    ||||||||||||||||||||||||||||    
T  10075021 ctttcataaaaggtgtcttctagcaaaa 10074994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 12159476 - 12159595
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||    
T  12159476 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttctaacaaatgctaatataataacttgctaaaagaca 12159575  T
Q  119 ctttcataaaaggtgtcttc 138  Q
    | ||||||||||||||||||    
T  12159576 ccttcataaaaggtgtcttc 12159595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 17347074 - 17347200
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  17347074 tgatttccactttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgctaatataataacttgctaaaagaca 17347173  T
Q  119 ctttcataaaaggtgtcttctagcaaa 145  Q
    | ||||||||| |||||||||||||||    
T  17347174 ccttcataaaatgtgtcttctagcaaa 17347200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 6322611 - 6322489
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||||||||||| ||||  ||||    
T  6322611 cactttttagttataactttgctaaaagacaccttcataaaaattaatttgtgttttttaacaaatgctaatagaataacttgttaaaaaacaccctcat 6322512  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    ||||| |||||||||||||||||    
T  6322511 aaaagatgtcttctagcaaaacc 6322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 15081249 - 15081138
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||| |||||||||    
T  15081249 tgatttccactttttagttataactttgctaaaagacaccttcataacaattaattggtgtcttttaacaaatgctcatagaataacttgctaaaagaca 15081150  T
Q  119 ctttcataaaag 130  Q
    | ||||||||||    
T  15081149 ccttcataaaag 15081138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 9891494 - 9891372
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||| ||| |||||||||| || ||    
T  9891494 cactttttagttataaatttgctaaaagacacattcataaaaattagttggtgtcttttaacaaatgacaataggataatttgctaaaagacacctttat 9891395  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
    ||||||| |||||||||||||||    
T  9891394 aaaaggtatcttctagcaaaacc 9891372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 18096453 - 18096330
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||| ||||||      |||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  18096453 tgatttccactttttagttataactctgctaa------ccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaaagaca 18096360  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||| ||||| |||||||||||||||||    
T  18096359 ccttcacaaaagatgtcttctagcaaaacc 18096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 19104310 - 19104442
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac--- 117  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | ||| ||||| ||| ||||||||       
T  19104310 atttccactttttagttataactttgctaaaacacaccttcgtaaaaattagttggtgtcttttaacaaatgctcataaaataatttgctaaaagacacc 19104409  T
Q  118 ----actttcataaaaggtgtcttctagcaaaa 146  Q
        || ||||||||||||||||||||||||||    
T  19104410 ctttaccttcataaaaggtgtcttctagcaaaa 19104442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 18102573 - 18102450
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||| ||||||      |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||    
T  18102573 tgatttccactttttagttataactctgctaa------ccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaaaaaca 18102480  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||  ||||| | |||||||||||||||    
T  18102479 ccttcgcaaaagatatcttctagcaaaacc 18102450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 25090549 - 25090624
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgtt 94  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| |||||||||    
T  25090549 tgatttccactttttagttataactttgctgaaagacaccttcataaaaattaattggtgttttttgacaaatgtt 25090624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 9533486 - 9533364
Alignment:
Q  30 ttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg----ttaatagaataacttgttaaaagacactttcat 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||    |  ||||||||||||  |||||||||  |||||    
T  9533486 ttttaattataactttgttaaaagacaccttcataaaaatttgttagtgtcttttaacaaatgctcatatatagaataacttactaaaagacatcttcat 9533387  T
Q  126 aaaaggtgtcttctagcaaaacc 148  Q
     |||||||||| ||| |||||||    
T  9533386 taaaggtgtctcctaacaaaacc 9533364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 14975433 - 14975505
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatg 92  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  14975433 atgattttcaccttttagttataa-tttgctaaaaaacaccttcataaaa-ttagttggtgtcttttaaaaaatg 14975505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 7190697 - 7190635
Alignment:
Q  54 acaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaaga 116  Q
    ||||||||||||||||||||||||||||||||| ||||  | ||||||||||||| |||||||    
T  7190697 acaccttcataaaaattagttggtgtcttttaataaatacttatagaataacttgataaaaga 7190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 29427262 - 29427304
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttc 61  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  29427262 tgatttccactttttagttataactttgctaaaagacaccttc 29427304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 32645761 - 32645707
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtc 80  Q
    ||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||    
T  32645761 cactttttagtaagaactttgttaaaagacactttcataaaaattagttggtgtc 32645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 24553234 - 24553286
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaatt 70  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||||    
T  24553234 atgatttccactttttagttataactttattaaaaaacaccttcataaaaatt 24553286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 19143694 - 19143648
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||    
T  19143694 tgatttccactttttagttata--tttgctaaaagacaccttcataaaa 19143648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 11742501 - 11742545
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaatta 71  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  11742501 actttttagttatatctttgctaaaatacaccttaataaaaatta 11742545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 18102868 - 18102914
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  18102868 actttttagttatatctttgctaaaacacaccttaataaaaactagt 18102914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 19143667 - 19143629
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19143667 taaaagacaccttcataaaaggtatcttctagcaaaacc 19143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 25061832 - 25061878
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  25061832 actttttagttatatctttgctaaaacacaccttaataaaaactagt 25061878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 21969905 - 21969857
Alignment:
Q  30 ttttagttataactttgctaaaagacaccttcataaaaattagttggtg 78  Q
    ||||||||||| ||||||||||| ||||||| |||||||  ||||||||    
T  21969905 ttttagttatatctttgctaaaacacaccttaataaaaacgagttggtg 21969857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 28295587 - 28295551
Alignment:
Q  111 aaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  28295587 aaaagacaccttcataaaagatgtcttctagcaaaac 28295551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 28516486 - 28516522
Alignment:
Q  111 aaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  28516486 aaaagacaccttcataaaagatgtcttctagcaaaac 28516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 29375269 - 29375221
Alignment:
Q  30 ttttagttataactttgctaaaagacaccttcata-aaaattagttggt 77  Q
    ||||||||||||||||  ||||||||| ||||||| |||||||||||||    
T  29375269 ttttagttataactttattaaaagacatcttcataaaaaattagttggt 29375221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 32645472 - 32645436
Alignment:
Q  111 aaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    ||||||||||||||||| | |||||||||||||||||    
T  32645472 aaaagacactttcataatatgtgtcttctagcaaaac 32645436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 33730697 - 33730749
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||| ||||||| ||||||| ||||||| |||| |||||    
T  33730697 actttttagttatatcttcgctaaaacacaccttaataaaaactagtgggtgt 33730749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 35182 - 35053
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| | ||||||||||||| |||||||||    
T  35182 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagtcggtgtctcttagcaaatgctcatagaataacttgctaaaagaca 35083  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||||||||||||||||||||||    
T  35082 ccttcataaaaggtgtcttctagcaaaacc 35053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 478438 - 478315
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||    
T  478438 tgattttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaaaaca 478339  T
Q  119 ctttcataaaaggtgtcttctagc 142  Q
    | ||||||||| ||||||||||||    
T  478338 ccttcataaaaagtgtcttctagc 478315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 94837 - 94909
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaat 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94837 tgatttccactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaat 94909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 95051 - 95092
Alignment:
Q  105 cttgttaaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    |||| |||||||||| ||| ||||||||||||||||||||||    
T  95051 cttgctaaaagacacattcttaaaaggtgtcttctagcaaaa 95092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 7336084 - 7336215
Alignment:
Q  17 catgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaaga 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||| ||| |||||||    
T  7336084 catgattttcactttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgcttatagagtaatttgctaaaaga 7336183  T
Q  117 cactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||| || |||||| ||||||||||||||||||    
T  7336184 caccttaataaaatgtgtcttctagcaaaacc 7336215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 30414140 - 30414259
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||| ||||||||    
T  30414140 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatataataacttgctaaaaaacaccttcataaa 30414239  T
Q  129 aggtgtcttctagcaaaacc 148  Q
    |||||| |||||||||||||    
T  30414240 aggtgtattctagcaaaacc 30414259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 1406838 - 1406709
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||||||||| ||| |||||||||    
T  1406838 tgatttccactttttagttataactttgctaaaagacaccttcacaaaaattagtcggtgtcttttaccaaatgttcatagaataatttgctaaaagaca 1406739  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  1406738 ccttcataaaatgtgtcttctagcaaaacc 1406709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 47921682 - 47921562
Alignment:
Q  26 cactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcat 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||| |||| |||||    
T  47921682 cactttttagttataactttgctaaaagacaccttcataaaaattaattggtatcttttaacaaatgtcaataggataacttgttaaaaaacaccttcat 47921583  T
Q  126 aaaaggtgtcttctagcaaaa 146  Q
    |||||| ||||||||||||||    
T  47921582 aaaaggcgtcttctagcaaaa 47921562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 2964892 - 2965019
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacact 120  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||     
T  2964892 atttccactttttagttataattttgcttaaagacaccttcataaaaattagttggtgtcttttagcaaatgttcatagaataacttgctagaagacacc 2964991  T
Q  121 ttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||| |||||||||||||||||||    
T  2964992 ttcataaacggtgtcttctagcaaaacc 2965019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 25671007 - 25671133
Alignment:
Q  21 attttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacact 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||||     
T  25671007 attttcactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacacc 25671106  T
Q  121 ttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||  |||||| |||||||||    
T  25671107 ttcataaaatatgtcttttagcaaaac 25671133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 1838688 - 1838817
Alignment:
Q  19 tgattttcactttttagttataacttt-gctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||  ||||||||    
T  1838688 tgatttccactttttagttataacttttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttactaaaagac 1838787  T
Q  118 actttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||||| |||||||||| ||||||    
T  1838788 actttcataaaatgtgtcttctaacaaaac 1838817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 44720193 - 44720065
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||| || ||||||||||||||| |||||||||    
T  44720193 tgattttcactttttagttataactttgttaaaagacacct-cataaaaattagttgatgtcttttaccaattgctaatagaataacttgctaaaagaca 44720095  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||||||||||||| |||||||    
T  44720094 ccttcataaaaggtgtcttctaacaaaacc 44720065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 1627703 - 1627830
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| |||||||||    
T  1627703 tgatttccactttttagttataactttgctaaaagacaccttcataaaagttagtt-gtgtcttttagcaaatgttcatagaataacttgctaaaagaca 1627801  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
      || ||||||||||||||||||||||||    
T  1627802 tctttataaaaggtgtcttctagcaaaac 1627830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 14463448 - 14463321
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||| ||||| |||    
T  14463448 tgattttcattttttacttataactttgttaaaagacaccttcataaaaattagttagtgtcttttagcaaatgctcatagaataacttgctaaaaaaca 14463349  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||||||||||||||||||||    
T  14463348 ccttcataaaaggtgtcttctagcaaaa 14463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 24992893 - 24993008
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  24992893 tgatttccactttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatataataatttgctaaaagaca 24992992  T
Q  119 ctttcataaaaggtgt 134  Q
    | ||||||||||||||    
T  24992993 ccttcataaaaggtgt 24993008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 25825326 - 25825455
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||||| | ||| ||||||||| |||||||||    
T  25825326 tgatttccactttttagttataactttgctgaaaggcacctccataaaaattagtttgtgtcttttaacaaatgctcataaaataacttgctaaaagaca 25825425  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | |||||||||||||||||||| |||||||    
T  25825426 ccttcataaaaggtgtcttctaacaaaacc 25825455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 40461110 - 40460983
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||    
T  40461110 tgatttccactttttagttataactttactaaaagatactttcataaaaattacttggtgtcttttaacaaatgttcatataataacttgctaaaagaca 40461011  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||| |||||||||| |||||    
T  40461010 ccttcataaaaagtgtcttctatcaaaa 40460983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 43939480 - 43939590
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||    
T  43939480 tgattttcactttttagttataattttgttaaaagacaccttcataaaaattaattggtgtcttttaacaaatgctcatagaataacttgctaaaagaca 43939579  T
Q  119 ctttcataaaa 129  Q
    | |||||||||    
T  43939580 ccttcataaaa 43939590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 9005555 - 9005430
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacac--cttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaaga 116  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||    ||||||||||||||| | ||||||||||||| |||||||    
T  9005555 tgattttcactttttagttataattttgctaaaagacacaccttcatagaaattagt----gtcttttaacaaatgctgatagaataacttgctaaaaga 9005460  T
Q  117 cactttcataaaaggtgtcttctagcaaaa 146  Q
    ||| ||||||||||||||||||||||||||    
T  9005459 caccttcataaaaggtgtcttctagcaaaa 9005430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 8549590 - 8549678
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataactt 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8549590 tgattttcactttttagttataactttgctaaaaaacaccttcataaaaattagttagtgtcttttaacaaatgctaatagaataactt 8549678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 5226928 - 5226801
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||| |||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||  | ||| |||||||||||||||||||    
T  5226928 tgatttccactttttggttatatctttgttaaaacacaccttcataaaaattagttggtgttttttaacaaatactcatataataacttgttaaaagaca 5226829  T
Q  119 ctttcataaaaggtgtcttctagcaaaa 146  Q
    | ||||||||| ||||||| ||||||||    
T  5226828 ccttcataaaatgtgtcttttagcaaaa 5226801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 42470882 - 42470756
Alignment:
Q  22 ttttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactt 121  Q
    ||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||  |||  |    
T  42470882 ttttcactttttaattataattttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaagcacatct 42470783  T
Q  122 tcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||| ||||||| ||| ||||||    
T  42470782 tcataaaatgtgtcttataggaaaacc 42470756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 15661119 - 15661234
Alignment:
Q  31 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttc-ataaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||| |||| ||| || |||    
T  15661119 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgcttataaaataacttgctaaaaaacaccttctatgaaa 15661218  T
Q  130 ggtgtcttctagcaaaa 146  Q
     ||||||||||||||||    
T  15661219 -gtgtcttctagcaaaa 15661234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 26213733 - 26213855
Alignment:
Q  25 tcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttca 124  Q
    |||||||||| ||||||||||| |||||||||| || ||||| |||||||| ||| |||||||||||| | ||||||||||||| |||||||||| |||     
T  26213733 tcactttttaattataactttgttaaaagacacatttataaatattagttgatgttttttaacaaatgctcatagaataacttgctaaaagacaccttcg 26213832  T
Q  125 taaaaggtgtcttctagcaaaac 147  Q
    ||||| |||||||||||||||||    
T  26213833 taaaatgtgtcttctagcaaaac 26213855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 17168273 - 17168157
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaa 128  Q
    |||||||||||||||| ||||||||||||||||||||||||||  | |||||||||| ||||||   |||||||||||||||||||||||| |||||||     
T  17168273 tttttagttataactt-gctaaaagacaccttcataaaaattaactagtgtcttttagcaaatgcatatagaataacttgttaaaagacaccttcataat 17168175  T
Q  129 aggtgtcttctagcaaaa 146  Q
     |||||||||||||||||    
T  17168174 tggtgtcttctagcaaaa 17168157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 10769797 - 10769924
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| | | |    
T  10769797 tgatttccactttttagttataacttggataaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcttatagaataacttgttaata-aaa 10769895  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
      ||||||||| ||||||||||| |||||    
T  10769896 tattcataaaatgtgtcttctagaaaaac 10769924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 17452945 - 17453053
Alignment:
Q  40 aactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttct 139  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||| | |||||||| |||| |||||||||| ||||||||| ||||||||     
T  17452945 aactttgctaaaagacaccttcacaaaaattagttggtgtcttttagcaaatgctcatagaatagcttgctaaaagacaccttcataaaaagtgtcttcg 17453044  T
Q  140 agcaaaacc 148  Q
    || ||||||    
T  17453045 agtaaaacc 17453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 4105632 - 4105513
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||| ||| |||||||||||||||  ||    
T  4105632 tgattttcactttttagttataactttgctaaaagacaccttcata---------tggtgttttttaacaaatgttgataaaataacttgttaaaaatca 4105542  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | |||||||||| ||||||||| ||||||    
T  4105541 ccttcataaaagatgtcttctaacaaaac 4105513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 30819571 - 30819668
Alignment:
Q  49 aaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaa 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||||   |||| |||| ||| ||||| |||| ||||||||||||||||||||||||||    
T  30819571 aaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataatttgctaaaaaacaccttcataaaaggtgtcttctagcaaaa 30819668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 26897382 - 26897311
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaa 90  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  26897382 tgatttccactttttagttataactttgctaaaaaacatcttcataaaaattagttggtgtcttttagcaaa 26897311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 30289030 - 30289120
Alignment:
Q  57 ccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||||| ||||||||| |||||||||||| || ||| |||||||||||||||||| | ||||||||| ||||||| ||| |||||    
T  30289030 ccttcataaaaaatagttggtgccttttaacaaatattcataaaataacttgttaaaagacgccttcataaaacgtgtcttttagtaaaac 30289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 6813955 - 6813855
Alignment:
Q  18 atgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagac 117  Q
    ||||||||||||||||| |||||||||| |||||||| |||||| | ||||||||||  |||||||||| ||||  | |||||||||||| |||||||||    
T  6813955 atgattttcactttttacttataactttactaaaagataccttcgt-aaaattagtttatgtcttttaaaaaatactcatagaataacttattaaaagac 6813857  T
Q  118 ac 119  Q
    ||    
T  6813856 ac 6813855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 41146624 - 41146547
Alignment:
Q  66 aaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagca 143  Q
    |||||||||||||| ||||| |||||| | ||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  41146624 aaattagttggtgttttttagcaaatgctcatagaataacttggtaaaaaacactttcataaaaagtgtcttctagca 41146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 49660416 - 49660363
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattag 72  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  49660416 tgatttccactttttagttataactttgttaaaagacaccttcataaaaattag 49660363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 26284535 - 26284579
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcat 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26284535 tgattttcactttttagttataactttgctaaaagacaccttcat 26284579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 49659959 - 49659891
Alignment:
Q  80 cttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    ||||||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||| |||||||    
T  49659959 cttttaacaaatgttcatagaataacttgctaaaaaacaccttcatgaaaggtgtcttctaacaaaacc 49659891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 10835664 - 10835582
Alignment:
Q  31 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaa 114  Q
    ||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| ||||||| ||||| |||| ||| |||||    
T  10835664 tttagttataa-tttgctagaacacactttcataaaaattagttggtgtcttttagcaaatgtcaataggataatttgctaaaa 10835582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 42470629 - 42470572
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttgg 76  Q
    |||||| ||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  42470629 tgatttccactttttagttataactttgttaaaagatacattcataaaaattagttgg 42470572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 1469723 - 1469771
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  1469723 tgatttccactttttagttatagcttttctaaaagacaccttcataaaa 1469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 16005747 - 16005799
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  16005747 actttttagttatatctttgctaaaacacaccttaataaaaattagtgggtgt 16005799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 26842877 - 26842829
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||    
T  26842877 tgatttccattttttagttataactttgctaaaagacactttcataaaa 26842829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 36630440 - 36630385
Alignment:
Q  64 aaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacac 119  Q
    ||||||||||||||||||||||  |||||| ||||| ||||||| |||||||||||    
T  36630440 aaaaattagttggtgtcttttagtaaatgtcaataggataactttttaaaagacac 36630385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 1469752 - 1469790
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  1469752 taaaagacaccttcataaaaggtgtcttctagcaaaacc 1469790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 28454887 - 28454933
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  28454887 actttttagttatatctttgctaaaacacaccttaataaaaattagt 28454933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 28764560 - 28764511
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  28764560 tttttagttatatctttgctaaaa-acaccttaataaaaattagttggtgt 28764511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 20201713 - 20201672
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaa 68  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  20201713 actttttagttatatctttgctaaaagacaccttaataaaaa 20201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 463031 - 462979
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  463031 actttttagttatatctttgctaaaatacaccttaataaaaactagtgggtgt 462979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 10558225 - 10558173
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  10558225 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 10558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 16073451 - 16073399
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  16073451 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 16073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 3273517 - 3273567
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  3273517 tttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 3273567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 8643175 - 8643221
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  8643175 actttttagttatatctttgctaaaacacaccttaataaaaactagt 8643221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 10764781 - 10764827
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  10764781 actttttagttatatctttgctaaaacacaccttaataaaaactagt 10764827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 13264773 - 13264723
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  13264773 tttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 13264723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 23413819 - 23413869
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||||  |||||||||| ||||||| ||||||| ||||||||||    
T  23413819 tttttagttatatatttgctaaaacacaccttaataaaaactagttggtgt 23413869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 26842848 - 26842810
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  26842848 taaaagacactttcataaaatgtgtcttatagcaaaacc 26842810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 26843011 - 26842965
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  26843011 actttttagttatatctttgctaaaacacaccttaataaaaactagt 26842965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 27787858 - 27787812
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  27787858 actttttagttatatctttgctaaaatacaccttaataaaaactagt 27787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 14345743 - 14345694
Alignment:
Q  100 aataacttgttaaaagacactttcataaaa-ggtgtcttctagcaaaacc 148  Q
    ||||| |||||||||||||| || |||||| |||||||||||||||||||    
T  14345743 aataatttgttaaaagacacctttataaaaaggtgtcttctagcaaaacc 14345694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 158427 - 158375
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    ||||||||||| || ||||||||||| ||||||| ||||||| |||| |||||    
T  158427 actttttagttttatctttgctaaaacacaccttaataaaaactagtgggtgt 158375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 6192437 - 6192385
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| |||||| |||| ||||||| ||||||| |||| |||||    
T  6192437 actttttagttatatctttgccaaaacacaccttaataaaaaatagtgggtgt 6192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 20201871 - 20201934
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaat 91  Q
    |||||||||||||||||| ||||||| || ||  ||||||||||||| ||||| || ||||||||    
T  20201871 actttttagttataactt-gctaaaacactcccacataaaaattagtgggtgtgttctaacaaat 20201934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 51432029 - 51432081
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||| ||||||| ||||||| ||||||| |||| |||||    
T  51432029 actttttagttatatcttcgctaaaacacaccttaataaaaactagtgggtgt 51432081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 231157 - 231286
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  231157 tgatttccactttttaattataactttgttataagacaccttcataaaaattagttggtatcttttaacaaatgttcatagaataatttgttaaaagaca 231256  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
    | ||||||||| ||||||||||||||||||    
T  231257 ccttcataaaatgtgtcttctagcaaaacc 231286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 392534 - 392405
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  392534 tgatttccactttttagttatacatttgctaaaagacaccttcataataattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagaca 392435  T
Q  119 ctttcataaaaggtgtcttctagcaaaacc 148  Q
      ||||||||||||||||||||||||||||    
T  392434 tcttcataaaaggtgtcttctagcaaaacc 392405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 9279 - 9155
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||| | ||||||||||||| ||||| |||    
T  9279 tgatttccactttttagttataattttgctaaaagacaccttcataaaa-ttagttggtatcttttagcaaatgctcatagaataacttgctaaaataca 9181  T
Q  119 ctttcataaaaggtgtcttctagcaa 144  Q
    | ||||||||||||||||||||||||    
T  9180 ccttcataaaaggtgtcttctagcaa 9155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 121661 - 121789
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| |||||||||||||||| ||||||||||||| | ||||||||||||| ||||||||||||| |||||| | |||||||||||||||||||||||    
T  121661 tgatttccactttttagttataattttgctaaaagactcattcataaaaattaattggtgtcttttagcaaatgctcatagaataacttgttaaaagaca 121760  T
Q  119 ctttcataaaaggtgtcttctagcaaaac 147  Q
    | ||||||||| |||| || |||||||||    
T  121761 ccttcataaaatgtgttttatagcaaaac 121789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 17914 - 17796
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagaca 118  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| || ||| ||  ||||| |||    
T  17914 tgatttccactttttagttataactttgctaaaaaacaccttcataaaaattagttgatgtcttttaacaaatgttaattgagtaaattactaaaaaaca 17815  T
Q  119 ctttcataaaaggtgtctt 137  Q
      |||||||||||||||||    
T  17814 tattcataaaaggtgtctt 17796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 49934 - 49821
Alignment:
Q  33 tagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggt 132  Q
    |||||||||||||| |||||||||| || |||||||||| ||||| | |||||||||||||| ||| ||||||||| ||||||| || ||||||||||||    
T  49934 tagttataactttgttaaaagacacatttataaaaattaattggtat-ttttaacaaatgttcataaaataacttgctaaaagatacattcataaaaggt 49836  T
Q  133 gtcttctagcaaaac 147  Q
    | |||||||||||||    
T  49835 ggcttctagcaaaac 49821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 103283 - 103399
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcata 126  Q
    ||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||| |||||||  |||  |||||||  ||||| |||| ||||||    
T  103283 actttttagttataacttc-ctaaaaaacaccttcataaaagttagttggtgtcttttagcaaatgtctataagataacttactaaaaaacaccttcata 103381  T
Q  127 aaaggtgtcttctagcaa 144  Q
    || |||||||||||||||    
T  103382 aagggtgtcttctagcaa 103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 3835 - 3748
Alignment:
Q  29 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaat-agaataacttgttaaaaga 116  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| | ||||||||| |||||||    
T  3835 tttttagttataactttgctaaaa-acaccttcataaaaattagttggtgtctattaacaaatgctaataaaaataacttgctaaaaga 3748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 77103 - 77027
Alignment:
Q  69 ttagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacactttcataaaaggtgtcttctagcaaa 145  Q
    ||||||||||||||||| |||||||| | ||||||||||| ||||| |||| ||||||||  |||||||||||||||    
T  77103 ttagttggtgtcttttagcaaatgtttacagaataacttgctaaaaaacaccttcataaatagtgtcttctagcaaa 77027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 75051 - 75002
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaaa 68  Q
    |||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  75051 tgatttccactttttagttataactttactaaaagacaccttaataaaaa 75002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 35935 - 35975
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaa 67  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  35935 actttttagttataattttgctaaaagacaccttcataaaa 35975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 35956 - 35993
Alignment:
Q  110 taaaagacactttcataaaaggtgtcttctagcaaaac 147  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  35956 taaaagacaccttcataaaagttgtcttctagcaaaac 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 8556 - 8604
Alignment:
Q  19 tgattttcactttttagttataactttgctaaaagacaccttcataaaa 67  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  8556 tgatttccactttttagttataactttgttaaaagacaacttcataaaa 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 8581 - 8623
Alignment:
Q  106 ttgttaaaagacactttcataaaaggtgtcttctagcaaaacc 148  Q
    |||||||||||||  ||||||||||| ||||||||||||||||    
T  8581 ttgttaaaagacaacttcataaaaggcgtcttctagcaaaacc 8623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 746 - 798
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  746 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 6721 - 6773
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagttggtgt 79  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| |||| |||||    
T  6721 actttttagttatatctttgctaaaacacaccttaataaaaactagtgggtgt 6773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 4241 - 4287
Alignment:
Q  27 actttttagttataactttgctaaaagacaccttcataaaaattagt 73  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  4241 actttttagttatatctttgctaaaacacaccttaataaaaactagt 4287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University