View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4594_low_4 (Length: 422)
Name: NF4594_low_4
Description: NF4594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4594_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 933891 - 934303
Alignment:
| Q |
1 |
gcattgatctatactctagatgtccagttctagttgttagacggttgttgagatcccacgttaactagaaatatagccaaaataactctccctcatgact |
100 |
Q |
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| T |
933891 |
gcattgatctatactctagatgtccagttctagttgttagacggttgttgagatcccacgttaactagaaatatagccaaaataactctccctcatgact |
933990 |
T |
|
| Q |
101 |
aggattggacatccagagtaaggataaatgcgggtagcgtagcacaataacaaagatctcaacataacccaattataaaattataattcattaacagata |
200 |
Q |
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| T |
933991 |
aggattggacatccagagtaaggataaatgcgggtagcgtagcacaataacaaagatctcaacataacccaattataaaattataattcattgacagata |
934090 |
T |
|
| Q |
201 |
ttggttatatgtaattctttataatatcttgccatccaatttgtagtggtgctgaaccattgagatgcttaacacaatgtattttcaaataaatatcctt |
300 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
934091 |
ttggttatatgtaattctttataatatcttaccatccaatttgtagtggtgctgaaccattgagatgcttaacacaatgtattttcaaataaatatcctt |
934190 |
T |
|
| Q |
301 |
actggtactgttgtagaggtatatttttgttgtgcatgtttgcacatgaaagttgcagttctcatttccagaacatacacttgtaaaagctatctgagag |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
934191 |
gctggtactgttgtagaggtatatttttgttgtgcatgtttgcacatgaaagttgcagttctcatttccagaacatacacttgtaaaagctatctgagag |
934290 |
T |
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| Q |
401 |
ttgatgatgatgt |
413 |
Q |
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| T |
934291 |
ttgataatgatgt |
934303 |
T |
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