View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4595-Insertion-10 (Length: 295)
Name: NF4595-Insertion-10
Description: NF4595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4595-Insertion-10 |
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Alignment Details
Target: chr6 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 25034522 - 25034740
Alignment:
| Q |
13 |
gacttggagatagtccgatactttttggaggagggtgaggcggctacaaccaagtgaagaagagctctaccacaaaggaaaagtcttttagaaagatgat |
112 |
Q |
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| T |
25034522 |
gacttggagatagtccgatactttttggaggagggtgaggcggcaacaaccaagtgaagaagagctctacca-aaaggaaaagtcttttagaaagatgat |
25034620 |
T |
|
| Q |
113 |
ttccaaatcaaggaggaaaactttacataaacaagctcttaaaattcagttgtataatacttgatgaagggttgattctnnnnnnnncctccttagctta |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
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| T |
25034621 |
ttccaaatcaaggaggaaaactttacataaacaagctcttaaaattcagttgtataatacttgatgaagggttgattctaaaaaaaacctccttggctta |
25034720 |
T |
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| Q |
213 |
ttgcatctcttattttctaa |
232 |
Q |
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|||||||| ||||||||||| |
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| T |
25034721 |
ttgcatcttttattttctaa |
25034740 |
T |
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