View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4595-Insertion-11 (Length: 241)
Name: NF4595-Insertion-11
Description: NF4595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4595-Insertion-11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 4522516 - 4522740
Alignment:
| Q |
17 |
agccttgcgacattcttcattgacagctagataatgatccatatcaaaactactcaactgcaagtttagagattgatataaaagaattcatacatacatn |
116 |
Q |
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| T |
4522516 |
agccttgcgacgttcttcaatgacagctagataatgatccatatcaaaactactcaactgcaagtttagagattgatataaaagaattcatacatgcata |
4522615 |
T |
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| Q |
117 |
nnnnnnttaaatttgtgaaacctgtataaaaagcaatgctaaaagcccctaaactttgttgagacttctggaaatacttgcctttttacatctattgtaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4522616 |
aaaaaattaaatttgtgaaacctgtataaaaagcaatgctaaaagccactaaactttgttgagacttctggaaatacttgcctttttacatctattgtaa |
4522715 |
T |
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| Q |
217 |
tccatcggaaagtactccaacacta |
241 |
Q |
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|||||||||| |||||||||||||| |
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| T |
4522716 |
tccatcggaacgtactccaacacta |
4522740 |
T |
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