View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4596-Insertion-3 (Length: 1003)
Name: NF4596-Insertion-3
Description: NF4596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4596-Insertion-3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 821; Significance: 0; HSPs: 34)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 821; E-Value: 0
Query Start/End: Original strand, 7 - 1001
Target Start/End: Original strand, 27831243 - 27832233
Alignment:
| Q |
7 |
agtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagca |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831243 |
agtatagatgatgttgtccttgttggtggctcttcaaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagca |
27831342 |
T |
|
| Q |
107 |
tcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgttaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831343 |
tcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgttac |
27831442 |
T |
|
| Q |
207 |
tccactgtctttaggttggaggcttatacatgatcacatggctgtagtgattcatagaaataccactatacctgtcaagaagacacaagnnnnnnnnaca |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
27831443 |
tccactgtctttaggttggaggcttatacatgatcacatggctgtagtgattcatagaaataccactatacctgtcaagaagacaaaagttttttttaca |
27831542 |
T |
|
| Q |
307 |
actgaagataaccaaacctttgtctttatcagggtttatgagggggagagaactagagccagcgacaacaatctacttggttcttttaatctcattgggt |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27831543 |
actgaagataaccaaacctttgtctttatcagggtttatgagggggagagaactagagccagcgacaacaatctacttggttcttttaatctcactgggt |
27831642 |
T |
|
| Q |
407 |
tgacccctgcgcctcgtcgccatcctttttatgtatgttttgctatcgatgaaaatggcattttgacagtctctgccacagaagtttccaccggcaatac |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831643 |
tgacccctgcgcctcgtcgccatcctttttatgtatgttttgctatcgatgaaaatggcattttgacagtctctgccacagaagtttccaccggcaatac |
27831742 |
T |
|
| Q |
507 |
aaataagataataataaccaattacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtgctgaagatgagaaa |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831743 |
aaataagataataataaccaattacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtgctgaagatgagaaa |
27831842 |
T |
|
| Q |
607 |
ttcctacgaatggctcaactgaaaaatgcattagatctctgtgtttacaaaattgaaactgctttgaagaagcagaatattcagttgaaactctccacac |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27831843 |
ttcctacgaatggctcaactgaaaaatgcattagatctctgtgtttacaaaattgaaactgctttgaagaagcagaatattcagttgaaactctccacac |
27831942 |
T |
|
| Q |
707 |
tagagaaaacgaagatcaatgctgcaatttcaattgccaaaaatctgcttgacgagaatcaccagcatgaactagacgttcgtcaggatcatttgaagga |
806 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27831943 |
tagagaaaacgaagatcaatgctgcaattacaattgccaaaaatctgcttgacgagaatcaccagcatgaactagacgttcttcaggatcatttgaagga |
27832042 |
T |
|
| Q |
807 |
gctcgaaagtatgtttgaaaacactattgccaagattgattagnnnnnnnnnnnnnnnnnnnnnccattaagattatac---tttaagattttctccatt |
903 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | |||||||||| |
|
|
| T |
27832043 |
gctcgaaagtatgtttgaaaacactattgccaagattgattagttttttttcttttttctttttccattaagattatacttttttaacaatttctccatt |
27832142 |
T |
|
| Q |
904 |
aagattttctgtgttgtcttgctgttttgtatgcaatgaatgcaaaacatttacataaagatttatttttctaatggtattatatatggtttatattt |
1001 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
27832143 |
aagattttctgtgttgtcttgctgttttgt-----atgaatgcaaaaaatttacatgaagattta-ttttctaatggta-tatatatggtttatattt |
27832233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 196 - 825
Target Start/End: Original strand, 27848711 - 27849340
Alignment:
| Q |
196 |
atcgatgttaatccactgtctttaggttggaggcttatacatgatcacatggctgtagtgattcatagaaataccactatacctgtcaagaagacacaag |
295 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||| |||| |||| |||||| |||| ||| ||||| |||||||||||||||| |||| ||| |
|
|
| T |
27848711 |
atcgatgttactccactgtctttaggttggaggctagagcataatcaaatgggtgtagttattcctaggaatactactatacctgtcaagacgacaaaag |
27848810 |
T |
|
| Q |
296 |
nnnnnnnnacaactgaagataaccaaacctttgtctttatcagggtttatgagggggagagaactagagccagcgacaacaatctacttggttcttttaa |
395 |
Q |
| |
|
|||| ||||||||||||| ||| || ||| ||||| |||||||||||||||||||||| ||||| |||||||||| ||||| ||||||| |
|
|
| T |
27848811 |
ttttttatacaagtgaagataaccaatcctctgccttgatcagtgtttatgagggggagagaactaaggccagtgacaacaatcggcttggctcttttac |
27848910 |
T |
|
| Q |
396 |
tctcattgggttgacccctgcgcctcgtcgccatcctttttatgtatgttttgctatcgatgaaaatggcattttgacagtctctgccacagaagtttcc |
495 |
Q |
| |
|
|||| ||| || | ||||| | ||| ||||||||||| ||||||||||| | || |||| ||| || | |||||||| |||||| ||||| ||| |
|
|
| T |
27848911 |
tctctctggattccctcctgcccttcgcggccatccttttgatgtatgttttacaattgatggaaacggtacattgacagttgctgccaaggaagtatcc |
27849010 |
T |
|
| Q |
496 |
accggcaatacaaataagataataataaccaattacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtgctg |
595 |
Q |
| |
|
|| |||| ||||||| |||| ||||| || |||||||||||||| |||||||||||||||||||| || ||||| |||||||||| || |||||| || |
|
|
| T |
27849011 |
actggcagtacaaatgagattataattactaattacaaagaaaggctatcaacagaagaaattaaaaagttgattcaagaagctgagaaccaccgtgatg |
27849110 |
T |
|
| Q |
596 |
aagatgagaaattcctacgaatggctcaactgaaaaatgcattagatctctgtgtttacaaaattgaaactgctttgaagaagcagaatattcagttgaa |
695 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||| ||||| ||||||||||| |||||||||||| | | ||||| |
|
|
| T |
27849111 |
aagatgagaaattcctacaaatggctcaactgaaaaatgcattggatagctgcatttataaaatcgaaactgctttaaagaagcagaatgctaacttgaa |
27849210 |
T |
|
| Q |
696 |
actctccacactagagaaaacgaagatcaatgctgcaatttcaattgccaaaaatctgcttgacgagaatcaccagcatgaactagacgttcgtcaggat |
795 |
Q |
| |
|
|||||||||| |||||| | |||||| |||| ||||||| ||| || |||||| ||||||| |||||| ||| |||||| |||| |||| | ||||| |
|
|
| T |
27849211 |
gctctccacacaagagaacaggaagatgaatgttgcaattagaatggcaaaaaatttgcttgatgagaatgaccttcatgaagtagatgttcttgaggat |
27849310 |
T |
|
| Q |
796 |
catttgaaggagctcgaaagtatgtttgaa |
825 |
Q |
| |
|
|||||| |||| || ||||||||||||||| |
|
|
| T |
27849311 |
catttggaggatcttgaaagtatgtttgaa |
27849340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 17260035 - 17259845
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||| || |||||||| ||||| || |||||||||||||| | |
|
|
| T |
17260035 |
gatgatgttgtccttgttggtggatcttctaggattccgaaagtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatcaacc |
17259936 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgt |
203 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||||||||||| |||| | | | |||||||||||||||||||||||||||||| |
|
|
| T |
17259935 |
ctgatgaggctgttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggtgttgatcgatgt |
17259845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 27846515 - 27846670
Alignment:
| Q |
46 |
attcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctgatgaggctgttgcttttggtgcagctgtgc |
145 |
Q |
| |
|
|||||||||| ||| ||| |||||| ||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
27846515 |
attcccaaagcgcatcagttattgggggactttttgt--ggaaaggatatgtacaagagcatcaaccctgatgaggctgttgcttttggagcagctgtgc |
27846612 |
T |
|
| Q |
146 |
aggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgt |
203 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
27846613 |
aggctgctttgttgagtgatgacattaagaatgttccaaacttagtgttgatcgatgt |
27846670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 29582213 - 29582385
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
|||||||| | |||||| |||||||||||||||| |||||||||||||| ||||||||| || ||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
29582213 |
tagatgatatcgtccttattggtggctcttctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgcatgagcatcaa |
29582312 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttcca |
183 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | |||| |||||||||| |
|
|
| T |
29582313 |
ccctgatgaggctgttgcttatggtgcagctgtgcaggctgctttgctgattgaaggcattgagaatgttcca |
29582385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 6789305 - 6789127
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||||| || |||||| || |||||| ||||||||||||||||| ||||||||| || |
|
|
| T |
6789305 |
atgatgttgtccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaaaggatttgtgcatgagcatcaaccc |
6789206 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||| || | | || || |||||||||||||||| |
|
|
| T |
6789205 |
tgatgaggctgttgcttacggtgcagctgtccaggctgctttgttgagcgaaggctctaagagtgttccaaacttggtg |
6789127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 17267733 - 17267543
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| | |||| |||||||| ||||| || ||||| || ||||| | |
|
|
| T |
17267733 |
gatgatgttgtccttgttggtgggtcttctaggattccgaaagtgcagcaactattgcagaacttcttcaaggggaaggaattatgcaaaagtatcaacc |
17267634 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgt |
203 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||||||||||| |||| | | | |||||||||||||||||||||||| ||||| |
|
|
| T |
17267633 |
ctgatgaggctgttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggtgttgattgatgt |
17267543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 8576122 - 8575939
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| ||| |||||||||| ||||| || || ||||||||||| |
|
|
| T |
8576122 |
tagatgatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggaggttttcaaggggaaggaattatgtaagagcatcaa |
8576023 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgtt |
194 |
Q |
| |
|
||||||||||||||||||| |||||| | ||| || ||||||||||||||||| | || || ||||||||||||||||||||| |
|
|
| T |
8576022 |
ccctgatgaggctgttgcttatggtgctgttgtccaagctgctttgttgagtgaaggcagtaagaatgttccaaacttggtgtt |
8575939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 29578053 - 29578224
Alignment:
| Q |
20 |
ttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctgatga |
119 |
Q |
| |
|
||||||||||||| || || ||||| ||||||||||||| | | |||||| |||||||||||||| | ||||||||||| |||||| || ||||| || |
|
|
| T |
29578053 |
ttgtccttgttggaggttcatctagaattcccaaagtgcggaaactattgcaagactttttcaagggtagggatttgtgcatgagcataaaccctgacga |
29578152 |
T |
|
| Q |
120 |
ggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggt |
191 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||| |
|
|
| T |
29578153 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcattaagaatgttccaaatttggt |
29578224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 8545429 - 8545248
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||| |||||| |||||||| ||| ||||| ||||| ||||| || ||||||||||| || |
|
|
| T |
8545429 |
tagatgatgttgtccttgttggcggttcttctaggattcctaaagtgagacagctattacaggagttttttaaggggaaggaattatgcaagagcattaa |
8545330 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||| || |||||| |||||| ||||| |
|
|
| T |
8545329 |
ccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgctgagtgaagacaataagaatgtcccaaacatggtg |
8545248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 8590434 - 8590253
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||| |||||| | | ||| |||||||| |
|
|
| T |
8590434 |
tagatgatgttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggggaaggatctttacaatagcatcaa |
8590335 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||| |||||||||||||||| |||||||||||| || ||||||||| | |||||| |||| ||||||||| || |||||| |
|
|
| T |
8590334 |
tccagatgaggctgttgcttatggtgcagctgttcaagctgctttgctttgtgatgggattaagaatgttcctaatttggtg |
8590253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 8581496 - 8581318
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| ||| |||||| |||| ||||| || |||||||||||||| |
|
|
| T |
8581496 |
tagatgatgttgtccttgttggtggttcttctaggattcctaaagtgagacagctattacaggagtttttccaggggaaggaattatgcaagagcatcaa |
8581397 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttg |
189 |
Q |
| |
|
||||||||||||||||||| |||||| ||| | |||||||||||| | ||||| | ||||| || ||||||||||||| |
|
|
| T |
8581396 |
ccctgatgaggctgttgcttatggtgctgctattcaggctgctttggttagtgaaggcattaagagtgttccaaacttg |
8581318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 7878105 - 7878310
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||| ||||||||| ||||| |||||| | |||| |||||||| |
|
|
| T |
7878105 |
tagatgatgttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgcaggacttttttaaggggaaggatatttgcagtagcatcaa |
7878204 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgttaatcca |
210 |
Q |
| |
|
|| ||||| |||||||||| |||||||||||| ||||||||| || | |||||| |||| ||||||||| || ||||||||| ||||||| |||| |
|
|
| T |
7878205 |
cccggatgaagctgttgcttatggtgcagctgttcaggctgctctgctttgtgatggtattaagaatgttcctaatttggtgttgcaagatgttactcca |
7878304 |
T |
|
| Q |
211 |
ctgtct |
216 |
Q |
| |
|
||||| |
|
|
| T |
7878305 |
ttgtct |
7878310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 8609713 - 8609560
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||| |||||||| || |||||||||||||| |||||| |||||||| || ||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
8609713 |
tagatgatgttgttcttgttggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatggaaaggatttgtgtatgagcatcaa |
8609614 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| ||||||||||||||| |||| |
|
|
| T |
8609613 |
ccctgatgaggcggttgcttatggtgctgctgtccaggctgctttgttgggtga |
8609560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 8616477 - 8616329
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
|||||||| |||| ||||| |||||||| ||||||||||| ||||||||| | |||||| ||||||||| | || |||||||||||||||| |||||| |
|
|
| T |
8616477 |
tagatgatattgttcttgtcggtggctcgtctaggattcctaaagtgcaggaactattgagtgactttttcgatgggaaggatttgtgcaagaacatcaa |
8616378 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttg |
159 |
Q |
| |
|
||||||||||||||||||| ||| ||||| || ||||||||||||||| |
|
|
| T |
8616377 |
tcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttg |
8616329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 3147062 - 3146879
Alignment:
| Q |
9 |
tatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatc |
108 |
Q |
| |
|
|||| ||||||| |||||||| |||||||| ||||| ||||| |||||||| || |||||| ||| ||||| || ||| || |||| || |||||| |
|
|
| T |
3147062 |
tatacatgatgtcgtccttgtcggtggctcgtctagaattccaaaagtgcaacaactattgcaggaattttttgcagggaagcatctgtgtaacagcatc |
3146963 |
T |
|
| Q |
109 |
aatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
|| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
3146962 |
aaccctgatgaggccgttgcttatggtgcagctgtgcaagctgctttgttgagtgaagactttaaaaatgttccaaacttggtg |
3146879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 8636713 - 8636863
Alignment:
| Q |
9 |
tatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |||| |||| |||| ||||| |||| ||||||||| |
|
|
| T |
8636713 |
tatagatgatgttgtccttgttggtggctcctctaggattccaaaggtgcagcaactattacaggacatttttaaggcgaaggaactgtgtaagagcatc |
8636812 |
T |
|
| Q |
109 |
aatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttg |
159 |
Q |
| |
|
|| |||||||||||||||||| ||| ||||| || |||||||| |||||| |
|
|
| T |
8636813 |
aacgctgatgaggctgttgcttatggagcagcagtccaggctgcattgttg |
8636863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 10494748 - 10494927
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
|||||| |||| ||||| |||||||| ||||||||||||||||||||| | |||||| || ||||||||||| ||||| || | || | | ||||| | |
|
|
| T |
10494748 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacc |
10494847 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
| |||||||||||||||| |||||||||||| ||||||||| | |||||||| | | ||| |||||| || ||||||||| |
|
|
| T |
10494848 |
cagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtg |
10494927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 8537836 - 8537651
Alignment:
| Q |
7 |
agtatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagca |
106 |
Q |
| |
|
||||| ||||||||||| || ||||||||||||||||||||||||||||||||| || || ||||||||| ||| |||||| | | || |||| |
|
|
| T |
8537836 |
agtatggatgatgttgtactagttggtggctcttctaggattcccaaagtgcagagtctgctgcaaaactttttcagggggaaggatatttttaaaagca |
8537737 |
T |
|
| Q |
107 |
tcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
|||| |||||||| |||||||||| |||||| ||||| ||||||||||||||||| | | ||||| || |||||| ||||||||| |
|
|
| T |
8537736 |
tcaaccctgatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcggaggcattaagactgttccgaacttggtg |
8537651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 8570107 - 8569962
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| || |||||| |||| ||||| || ||||| ||||| || |
|
|
| T |
8570107 |
tagatgatgttgtccttgttggtggttcttctaggattcctaaagtgaggcagctattacaagagtttttccaggggaaggaattatgcaacagcattaa |
8570008 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttg |
156 |
Q |
| |
|
||||||||||||||||||| ||||||||| | ||||||| |||| |
|
|
| T |
8570007 |
ccctgatgaggctgttgcttacggtgcagctattcaggctgttttg |
8569962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 8586078 - 8586259
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
|||| ||| |||||||||| |||||||| || || ||||||||||| ||| | |||||| ||||| ||||| || || ||||| ||||||| |||||| |
|
|
| T |
8586078 |
tagacgatattgtccttgtcggtggctcgtccagaattcccaaagtacaggaactattgagtgacttcttcaatgggaaagatttatgcaagaacatcaa |
8586177 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||||||||| ||| || || || |||||| ||||| || || | ||| ||| ||| ||||||||||||||| |
|
|
| T |
8586178 |
tcctgatgaggctgttgctagtggggctgcagttcaggcttctttgctgtgtaaagactttaagaaagttccaaacttggtg |
8586259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 8646670 - 8646490
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| ||||| ||||| || ||| | || ||| |||||||| | ||||| || ||| |||||||||| || |
|
|
| T |
8646670 |
atgatgttgttcttgttggtggctcctctagaattccaaaagtacaacagatgctgaaggagtttttcaatgagaaggaattatgcgagagcatcaaccc |
8646571 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgtt |
194 |
Q |
| |
|
||||| ||| ||||||| ||| ||||| || ||||||||||| || |||||| | ||| ||||| ||||||||||||||| |
|
|
| T |
8646570 |
tgatgtggccgttgcttatggcgcagccgttcaggctgctttattatgtgatggctttaagaatgctccaaacttggtgtt |
8646490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 8654244 - 8654065
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||||||||| || || |||||||| ||||||||||||||||||||| | |||||| || ||||||||||| |||| ||||| | || ||||| | |
|
|
| T |
8654244 |
gatgatgttgtactcgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagagtttttcaaggggaaggctttgtttatgaatatcaacc |
8654145 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
| ||||||||| |||| | ||| || ||||| ||||||||| | |||||||| ||| ||| |||||| || ||||||||| |
|
|
| T |
8654144 |
cagatgaggctattgcatatggcgctgctgttcaggctgctattttgagtgaagactttaagaatgtccccaacttggtg |
8654065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 8667213 - 8667062
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||||||||||||||||||| | | |||| || | ||||||||| ||||| || | || | | ||||| | |
|
|
| T |
8667213 |
gatgatgttgtacttgtcggtggctcgtctaggattcccaaagtgcaggaacaattgctagaatatttcaaggggaaggaattattcatgggtatcaacc |
8667114 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
| || ||||||||||||| |||||||||||| ||||||||| | |||||||| |
|
|
| T |
8667113 |
cagacgaggctgttgcttatggtgcagctgttcaggctgctattttgagtga |
8667062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 8102460 - 8102311
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
|||||||||| ||||||||||| || |||||||||||||||| ||||| || ||| ||||| ||||| || ||||| | ||||| |||||||| || |
|
|
| T |
8102460 |
atgatgttgttcttgttggtggttcaactaggattcccaaagttcagcaactgttgcaagacttcttcaatggtaaggagctatgcaaaagcatcaaccc |
8102361 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtg |
163 |
Q |
| |
|
|| ||||||||||||| |||||| ||||| || |||||| | ||||||| |
|
|
| T |
8102360 |
cgacgaggctgttgcttatggtgccgctgttcaagctgctatcttgagtg |
8102311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 428 - 612
Target Start/End: Complemental strand, 6788891 - 6788707
Alignment:
| Q |
428 |
atcctttttatgtatgttttgctatcgatgaaaatggcattttgacagtctctgccacagaagtttccaccggcaatacaaataagataataataaccaa |
527 |
Q |
| |
|
|||||||| |||||| |||| |||| ||||||||||| |||||||| || ||||| || ||| ||||| ||||||| ||| |||| | |||||||| |
|
|
| T |
6788891 |
atccttttgatgtatatttttctattgatgaaaatggtattttgaccgtttctgctactgaaaaatccacgggcaatatgaatgagattaccataaccaa |
6788792 |
T |
|
| Q |
528 |
ttacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtgctgaagatgagaaattccta |
612 |
Q |
| |
|
|||||||||||| | | | || |||||||| ||| ||||| |||||||||| ||||||| | ||||||| ||||||||||| |
|
|
| T |
6788791 |
ttacaaagaaaggttgtgtagtgacgaaattaaaaaattgattaaagaagctgagaattacctcgttgaagataagaaattccta |
6788707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8601768 - 8601625
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||||| |||||||||||| || ||||||||||||||||||||||| || || || || |||||||| | ||||| | ||| ||||||||||| |
|
|
| T |
8601768 |
gatgatgctgtccttgttggcggttcttctaggattcccaaagtgcaacaattactgaaagaatttttcaattggaaggacatttgcgtgagcatcaatc |
8601669 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttg |
156 |
Q |
| |
|
|||||||||| ||||| | ||| ||||| || || ||||||||| |
|
|
| T |
8601668 |
ctgatgaggcagttgcctatggcgcagcagttcaagctgctttg |
8601625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 39985356 - 39985290
Alignment:
| Q |
97 |
tgcaagagcatcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtg |
163 |
Q |
| |
|
||||||||||| |||||||||||||||||||| | |||||| ||||| ||||||||| | ||||||| |
|
|
| T |
39985356 |
tgcaagagcataaatcctgatgaggctgttgcatatggtgctgctgttcaggctgctatcttgagtg |
39985290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 8646344 - 8646286
Alignment:
| Q |
340 |
gtttatgagggggagagaactagagccagcgacaacaatctacttggttcttttaatct |
398 |
Q |
| |
|
||||||||||| |||||| | ||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
8646344 |
gtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggttcttttaatct |
8646286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 13333835 - 13333893
Alignment:
| Q |
106 |
atcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
||||| || |||||||||||||||| |||||||||||| ||||||||| | |||||||| |
|
|
| T |
13333835 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtga |
13333893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 8616023 - 8615910
Alignment:
| Q |
499 |
ggcaatacaaataagataataataaccaattacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtgctgaag |
598 |
Q |
| |
|
|||||||||||| | |||| ||||||||| |||||||||| |||| | || |||||||| ||| ||||| ||||||| || | ||||| ||||||| |
|
|
| T |
8616023 |
ggcaatacaaatgaaataacgataaccaatgacaaagaaaggttatcggctgatgaaattaaaaaactgattcaagaagcagaggagtaccgcgctgaag |
8615924 |
T |
|
| Q |
599 |
atgagaaattccta |
612 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
8615923 |
atgaaaaattccta |
8615910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 8559065 - 8558985
Alignment:
| Q |
125 |
ttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgtta |
205 |
Q |
| |
|
|||||| |||||||||||| ||||||| |||| | ||||| |||| || ||||||||||||| ||||| ||| ||||||| |
|
|
| T |
8559065 |
ttgcttatggtgcagctgtccaggctgttttgcttagtgaagacactaagaatgttccaaacatggtgctgagagatgtta |
8558985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 1301254 - 1301208
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgca |
59 |
Q |
| |
|
|||||| |||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
1301254 |
gatgatattgttcttgtgggtggctcgtctaggattcccaaagtgca |
1301208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 3146731 - 3146678
Alignment:
| Q |
340 |
gtttatgagggggagagaactagagccagcgacaacaatctacttggttctttt |
393 |
Q |
| |
|
||||||||||| |||||| | ||||| || ||||||||||| |||||||||||| |
|
|
| T |
3146731 |
gtttatgagggtgagagagcaagagctagtgacaacaatctgcttggttctttt |
3146678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 99; Significance: 2e-48; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 15594827 - 15594649
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
||||| ||||| |||||||||| ||||||||||||||||||||||| || |||||| ||| |||||| |||||||||| ||||||| ||||||||| || |
|
|
| T |
15594827 |
atgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactattgaaggattttttcgagggaaaggaattgtgcatgagcatcaaccc |
15594728 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||| |
|
|
| T |
15594727 |
tgatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtgaaggttttaaaaatgttccaaacttggtg |
15594649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 34467163 - 34467341
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
|||||| ||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| || |||||| | ||||| |||||||| || |
|
|
| T |
34467163 |
atgatgctgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatggtaaggatctatgcaatagcatcaaccc |
34467262 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
|||||||||||| |||| || ||||||||||| ||||||||||||||| | | | ||| |||||||||||||||||| |
|
|
| T |
34467263 |
tgatgaggctgtcgcttatgtcgcagctgtgcaagctgctttgttgagtaaaggctttaacaatgttccaaacttggtg |
34467341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 4678931 - 4679059
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||||||||| ||||| ||||| || || |||||||||||||||||| | |||||| |||||||| ||| | ||||||||||||||||| ||||| | |
|
|
| T |
4678931 |
gatgatgttgttcttgtgggtggttcatcgaggattcccaaagtgcaggatctattgcaagacttttttaagcggaaggatttgtgcaagagtatcaacc |
4679030 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagct |
141 |
Q |
| |
|
| |||||||||||||||| |||||||||| |
|
|
| T |
4679031 |
cagatgaggctgttgcttatggtgcagct |
4679059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 52549395 - 52549499
Alignment:
| Q |
88 |
aaggatttgtgcaagagcatcaatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaact |
187 |
Q |
| |
|
||||| ||||||||| |||| ||||||||||||| ||| |||| ||| |||||||| |||||||| ||||||||||| | |||| |||||||||||| | |
|
|
| T |
52549395 |
aaggagttgtgcaagggcattaatcctgatgaggttgtagcttatggcgcagctgttcaggctgcattgttgagtgaaggcattcagaatgttccaaagt |
52549494 |
T |
|
| Q |
188 |
tggtg |
192 |
Q |
| |
|
||||| |
|
|
| T |
52549495 |
tggtg |
52549499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 493 - 612
Target Start/End: Complemental strand, 15594352 - 15594233
Alignment:
| Q |
493 |
tccaccggcaatacaaataagataataataaccaattacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtg |
592 |
Q |
| |
|
||||| ||||||||||| |||| | |||||||||| |||||||||| | ||| || | |||||||| ||||||||| ||||||| || | || |||| |
|
|
| T |
15594352 |
tccactggcaatacaaacgagatcacaataaccaatgacaaagaaaggttgtcagcatatgaaattaaaaaaatgattcaagaagccgaggaatatcgtg |
15594253 |
T |
|
| Q |
593 |
ctgaagatgagaaattccta |
612 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
15594252 |
ctgaagatgagaaattccta |
15594233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 12528300 - 12528147
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
|||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||| ||||| || | |||||||||||| |
|
|
| T |
12528300 |
tagatgatattgtacttgttggtggctcgtctaggattcccaaagtgaagcagctattgcaggagtttttcaagggcaaggagttatacaagagcatcaa |
12528201 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |
|
|
| T |
12528200 |
ccctgatgaggctgttgcttatggtgccgctgttcaggctgctttgttgagtga |
12528147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 43744614 - 43744459
Alignment:
| Q |
9 |
tatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatc |
108 |
Q |
| |
|
|||| |||||||||| |||||||||||||| ||||||||||| ||||| || || |||||| ||| ||||| || ||||||||||| |||| ||| |
|
|
| T |
43744614 |
tatacatgatgttgttcttgttggtggctcctctaggattccaaaagtacaacaactattgcaggaattttttgcagggaaggatttgtgtaagaacatt |
43744515 |
T |
|
| Q |
109 |
aatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
|| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43744514 |
aaccctgatgaggcagttgctattggtgcagctgtgcaggctgctttgttgagtga |
43744459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 43744283 - 43744230
Alignment:
| Q |
340 |
gtttatgagggggagagaactagagccagcgacaacaatctacttggttctttt |
393 |
Q |
| |
|
||||||||||| |||||| | ||||| || ||||||||||| |||||||||||| |
|
|
| T |
43744283 |
gtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggttctttt |
43744230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 91; Significance: 1e-43; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 12245776 - 12245962
Alignment:
| Q |
9 |
tatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatc |
108 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||||||||||||||||||| || |||||||| |||||||||||| || ||||| |||||||||||||| |
|
|
| T |
12245776 |
tatagatgattttgtacttgttggtggatcttctaggattcccaaagtccaacagctattacaggactttttcaacgggaaggaattgtgcaagagcatt |
12245875 |
T |
|
| Q |
109 |
aatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttg |
195 |
Q |
| |
|
|| ||||| ||||||||||||| ||| |||||||| || ||||||||||||||| | || ||| |||||||||||| ||||||||| |
|
|
| T |
12245876 |
aaccctgacgaggctgttgcttatggggcagctgttcaagctgctttgttgagtaaagatgttaagaatgttccaaatttggtgttg |
12245962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 12258953 - 12259132
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||| || || |||||||||||||| || |
|
|
| T |
12258953 |
tagatgatgttgtccttgtaggtgggtcttctaggattctcaaagtgcagcagctattacaggattttttcaaggggaaagagttgtgcaagagcattaa |
12259052 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttgg |
190 |
Q |
| |
|
||||||||||||||| |||||||| || ||| | |||||||||||||| ||||| || || |||||||||||| |||| |
|
|
| T |
12259053 |
tcctgatgaggctgtagcttttggggcggctattcaggctgctttgttaagtgaagatatccagaatgttccaaagttgg |
12259132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 11999205 - 11999020
Alignment:
| Q |
9 |
tatagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatc |
108 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||| |||||||| || |||||||| ||||||||||| || ||||| |||||||||||||| |
|
|
| T |
11999205 |
tatagatgatgttgtacttgttggtggatcttctaggat-cccaaagtccaacagctattacatgactttttcaacgggaaggagttgtgcaagagcatt |
11999107 |
T |
|
| Q |
109 |
aatcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttg |
195 |
Q |
| |
|
|| |||||||||||||| |||| ||| |||||||| || ||||||||||||||||| || ||| |||||||||||| ||||||||| |
|
|
| T |
11999106 |
aaccctgatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtgaagatgttaagaatgttccaaatttggtgttg |
11999020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 7542023 - 7541870
Alignment:
| Q |
10 |
atagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatca |
109 |
Q |
| |
|
|||||||||||||||||||| || || ||||| |||||||||| ||| || |||||||| |||||||||||| |||||||| |||||||||||||| | |
|
|
| T |
7542023 |
atagatgatgttgtccttgtcggcgggtcttcgaggattcccatagtacatcagctattaaaggactttttcaatggaaaggacttgtgcaagagcatta |
7541924 |
T |
|
| Q |
110 |
atcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtg |
163 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||| |||||||| |||||||||| |
|
|
| T |
7541923 |
atcctgatgaggctgttgcttatggggcagctgttcaggctgcattgttgagtg |
7541870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 16662367 - 16662545
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
||||| |||| ||||| || ||||| ||||||||||| ||||||||| | ||||| |||| ||||| || ||||| ||||||||||||||||| || |
|
|
| T |
16662367 |
atgatattgttcttgtcgggggctcgtctaggattccaaaagtgcaggaattattgcgtaacttcttcaatgggaaggagttgtgcaagagcatcaaccc |
16662466 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| |||||| |||||||||| | ||||| | ||||||||||||||||| |
|
|
| T |
16662467 |
tgatgaggctgttgcttatggggcagctgtgcaagctgctgtgttgagtgaaggcattaaggatgttccaaacttggtg |
16662545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 14703204 - 14703023
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||| ||||||||||||| ||||| |||| |||||||||| |||| ||||| |||||||| ||||| || |
|
|
| T |
14703204 |
tagatgatgttgttcttgtcggtgggtcttctcggattcccaaagtacagcaattattacaggactttttccaggggaaggagttgtgcaacagcattaa |
14703105 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
|||||||| ||||| |||| ||| |||||||| |||||||||||||||||||| ||| | | ||||||||| || |||||| |
|
|
| T |
14703104 |
ccctgatgaagctgtagcttatggggcagctgttcaggctgctttgttgagtgaagacgtcaagaatgttccgaagttggtg |
14703023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 16657891 - 16658083
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||||||||||||||||||| | |||||| |||||||||||||| |||||||| ||||| || ||||| | |
|
|
| T |
16657891 |
gatgacgttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagtatcaacc |
16657990 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgttgatcgatgtta |
205 |
Q |
| |
|
| ||||| |||||||||| ||||||||||| || |||||| | |||||||| | | ||| |||||| ||| | |||||||||| ||||||| |
|
|
| T |
16657991 |
cggatgaagctgttgcttacggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgtcccagatttggtgttgagagatgtta |
16658083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 43625203 - 43625027
Alignment:
| Q |
16 |
gatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctg |
115 |
Q |
| |
|
||||||||||||||||| ||||| ||||| ||||| ||||| | ||||| ||| ||| ||||||||||| ||||| | ||| | ||||| || |||| |
|
|
| T |
43625203 |
gatgttgtccttgttggcggctcctctagaattccaaaagtaaaacagctgttgcaggagtttttcaaggggaaggaatcatgcgaaagcataaaccctg |
43625104 |
T |
|
| Q |
116 |
atgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||||| | |||||| | | ||||| |||||||||||| |||||| |
|
|
| T |
43625103 |
atgaggctgttgcttatggtgcagctgtccaggctgctattttgagtaaaggcattaagaatgttccaaaattggtg |
43625027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 12234483 - 12234349
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
||||| ||||||||| |||| || || ||||||||||||||||||||||| |||||| ||| ||||||||||| ||||| |||||||||| || || | |
|
|
| T |
12234483 |
gatgaagttgtccttattggcgggtcctctaggattcccaaagtgcagcaactattgcaggattttttcaaggggaaggagctgtgcaagagtattaacc |
12234384 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcagg |
148 |
Q |
| |
|
|||| ||||| ||||||| || |||||||| |||| |
|
|
| T |
12234383 |
ctga-gaggcggttgcttatgaggcagctgttcagg |
12234349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 437 - 539
Target Start/End: Original strand, 12246207 - 12246309
Alignment:
| Q |
437 |
atgtatgttttgctatcgatgaaaatggcattttgacagtctctgccacagaagtttccaccggcaatacaaataagataataataaccaattacaaaga |
536 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||||||||| ||||| || | ||| | |||||| ||||| |||| | |||||| ||||||||||| |
|
|
| T |
12246207 |
atgtatgttttgctattggtgaaaatggtattttgacagtttctgctacgaatagttcttctggcaattcaaatgagattacaataactaattacaaaga |
12246306 |
T |
|
| Q |
537 |
aag |
539 |
Q |
| |
|
||| |
|
|
| T |
12246307 |
aag |
12246309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 437 - 482
Target Start/End: Complemental strand, 7541593 - 7541548
Alignment:
| Q |
437 |
atgtatgttttgctatcgatgaaaatggcattttgacagtctctgc |
482 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
7541593 |
atgtttgttttgctattgatgaaaatggtattttgacagtttctgc |
7541548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 84; Significance: 2e-39; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 35132252 - 35132069
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaa |
110 |
Q |
| |
|
||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||| || |
|
|
| T |
35132252 |
tagatgatgttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaagggaaggagttgtgcaagagcattaa |
35132153 |
T |
|
| Q |
111 |
tcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtgtt |
194 |
Q |
| |
|
|| ||||||||||| |||| ||| ||||| || |||||||||||||||||| | | ||| | ||||||||||| |||||||| |
|
|
| T |
35132152 |
ccccgatgaggctgtagcttatggggcagcagttcaggctgctttgttgagtaaaggcataaaaaatgttccaaagttggtgtt |
35132069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 30775048 - 30774867
Alignment:
| Q |
11 |
tagatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggacttt-ttcaagggaaaggatttgtgcaagagcatca |
109 |
Q |
| |
|
|||||||| |||| ||||| ||||| |||||||||||||||||||||||| | |||||| || | ||| ||||| || |||||||||||||||||||||| |
|
|
| T |
30775048 |
tagatgatattgttcttgtcggtggttcttctaggattcccaaagtgcaggaactattg-cgtaatttcttcaatgggaaggatttgtgcaagagcatca |
30774950 |
T |
|
| Q |
110 |
atcctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
192 |
Q |
| |
|
||||||||||||| |||||| || |||||||| ||||||||| | |||||||| | ||||| ||||| ||||| |||||| |
|
|
| T |
30774949 |
atcctgatgaggcagttgctcacggggcagctgtccaggctgctctattgagtgaaggcattaagaatgccccaaagttggtg |
30774867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 9336265 - 9336416
Alignment:
| Q |
13 |
gatgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatc |
112 |
Q |
| |
|
|||||| |||| ||||| |||||||| ||||||||||| |||||||| | |||||| || ||||||||||| ||||| || | || | | ||||| | |
|
|
| T |
9336265 |
gatgatattgttcttgtgggtggctcgtctaggattccgaaagtgcaagaactattgctagaatttttcaaggggaaggaattattcatgggtatcaacc |
9336364 |
T |
|
| Q |
113 |
ctgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
| |||||||||||||||| |||||||||||| || |||||| | |||||||| |
|
|
| T |
9336365 |
cagatgaggctgttgcttatggtgcagctgttcaagctgctattttgagtga |
9336416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 520 - 612
Target Start/End: Complemental strand, 30774539 - 30774447
Alignment:
| Q |
520 |
ataaccaattacaaagaaagactatcaacagaagaaattaagaaaatgattgaagaagctgataattaccgtgctgaagatgagaaattccta |
612 |
Q |
| |
|
|||||||| |||||||||| |||| | |||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
30774539 |
ataaccaacgacaaagaaaggttatccagagaagaaattaacaaaatgattcaagaagctagagagtaccgtgctgaagatgagaaattccta |
30774447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 23588108 - 23588257
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcc |
113 |
Q |
| |
|
|||||||||| ||||||||||| || ||||||||||||| || || || || ||| || || ||||| |||||||| | || ||||||||||| || |
|
|
| T |
23588108 |
atgatgttgttcttgttggtggatccactaggattcccaaggttcaacaacttttgcaagatttcttcaatggaaaggagctttgtaagagcatcaaccc |
23588207 |
T |
|
| Q |
114 |
tgatgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtg |
163 |
Q |
| |
|
||||| |||||||| | ||| ||||| || || |||||| | ||||||| |
|
|
| T |
23588208 |
cgatgaagctgttgcatatggggcagccgtccaagctgctattttgagtg |
23588257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 28219709 - 28219561
Alignment:
| Q |
16 |
gatgttgtccttgttggtggctcttctaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctg |
115 |
Q |
| |
|
|||||||| |||||||| ||||| ||||| ||||| ||||| || || ||| || ||| ||||| || ||||| ||||| |||||||| || |||| |
|
|
| T |
28219709 |
gatgttgttcttgttggaggctcctctagaattccaaaagtacaacaactactgcaggaattttttggagggaaggaattgtgtaagagcattaaccctg |
28219610 |
T |
|
| Q |
116 |
atgaggctgttgcttttggtgcagctgtgcaggctgctttgttgagtga |
164 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
28219609 |
atgaggctgttgcttatggtgcagctgtgcaggctgctttgttgagtga |
28219561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000009; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 11160930 - 11160896
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggatt |
48 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |
|
|
| T |
11160930 |
atgatgttgtccttgttggtggctctactaggatt |
11160896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 11199506 - 11199472
Alignment:
| Q |
14 |
atgatgttgtccttgttggtggctcttctaggatt |
48 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |
|
|
| T |
11199506 |
atgatgttgtccttgttggtggctctactaggatt |
11199472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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