View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4597-Insertion-14 (Length: 53)
Name: NF4597-Insertion-14
Description: NF4597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4597-Insertion-14 |
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Alignment Details
Target: chr3 (Bit Score: 38; Significance: 0.0000000000002; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 17663366 - 17663403
Alignment:
| Q |
8 |
aaggttgcttgaagaattgcctgaagggtgcatcgcga |
45 |
Q |
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| T |
17663366 |
aaggttgcttgaagaattgcctgaagggtgcatcgcga |
17663403 |
T |
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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 19246021 - 19246058
Alignment:
| Q |
8 |
aaggttgcttgaagaattgcctgaagggtgcatcgcga |
45 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
19246021 |
aaggttgcttgaagaattgcctgaagggtgcatcgcga |
19246058 |
T |
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