View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4597_low_10 (Length: 279)
Name: NF4597_low_10
Description: NF4597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4597_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 934551 - 934273
Alignment:
| Q |
1 |
tgcaattcttccttggctacctgatattgtgtaagatcttcatccttgttctgcatataagagcaggccaaaattataaaaattcataatgtatgcatgt |
100 |
Q |
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| T |
934551 |
tgcaattcttccttggctacctgatattgtgtaagatcttcatccttgttctgcatataagagcaggccaaaattataaaaattcataatgtatgcatgt |
934452 |
T |
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| Q |
101 |
aaattagatacaaagatatagttcaaaattttccttttcaaaatacaaccaaggtatccgggacctggatgcttgtgataattaaatttactgttattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
934451 |
aaattagatacaaagatatagttcaaaattttccctttcaaaatacaaccaaggtatccgggacctggatgcttgtgataattaaatttactgttattaa |
934352 |
T |
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| Q |
201 |
ttcaaaatttcagacattaattgcagtatcgcagcatggaagataaatacatcattatcaactctcagatagcttttac |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
934351 |
ttcaaaatttcagacattaattgcagtatcgcagcatggaagataaatacatcattatcaactctcagatagcttttac |
934273 |
T |
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