View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4597_low_7 (Length: 340)
Name: NF4597_low_7
Description: NF4597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4597_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 29 - 270
Target Start/End: Complemental strand, 22805260 - 22805019
Alignment:
| Q |
29 |
aggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgttaaaccaacacgacctttgttatcattgaccaa |
128 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||| ||||||| |
|
|
| T |
22805260 |
aggtatggattgattatgatggagtgaagaaaaagattgatgttactttagctccagtttatgttgttaaaccaacaggaccttcgttatcaatgaccaa |
22805161 |
T |
|
| Q |
129 |
tgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggagttttaag |
228 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22805160 |
agatctttctccaattcttaacaatagtatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatattcttggttggagttttaag |
22805061 |
T |
|
| Q |
229 |
gttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
270 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| || ||||| |
|
|
| T |
22805060 |
gttaatggtcaagctcaaaaccttgtaatctctcaatttcct |
22805019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 29 - 330
Target Start/End: Complemental strand, 22814978 - 22814668
Alignment:
| Q |
29 |
aggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgtt---------aaaccaacacgacctttgttatc |
119 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||| | |||||||||| |||||||||||| |
|
|
| T |
22814978 |
aggtatggattgactatgatggagtgaagaaaaagattgatgttactttagctccaatgagtgttggtgctagtaataaaccaacacaacctttgttatc |
22814879 |
T |
|
| Q |
120 |
attgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttgg |
219 |
Q |
| |
|
||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |
|
|
| T |
22814878 |
attgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcatcttcaacagggttacttgtagcttctcattatattcttgggtgg |
22814779 |
T |
|
| Q |
220 |
agttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttgatgagnnnnnnnngtcaaaatttttaactgttg |
319 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||| |||| ||| |||||||||||||||| |
|
|
| T |
22814778 |
agttttaaggttaatggccaagctcaaaaccttgaaatatctgaacttcctaagctaacagtatttgctgaggtaaaaaagtctaaatttttaactgttg |
22814679 |
T |
|
| Q |
320 |
ggttgcctttg |
330 |
Q |
| |
|
||||||||||| |
|
|
| T |
22814678 |
ggttgcctttg |
22814668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 29 - 270
Target Start/End: Complemental strand, 22875867 - 22875623
Alignment:
| Q |
29 |
aggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgtt-gt--taaaccaacacgacctttgttatcattgac |
125 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||| | || ||||||||||| |||||||||||||||||| |
|
|
| T |
22875867 |
aggtatggattgactatgatggagtgaaaaaaaagattgatgttactttagctccaatagatgctagtaataaaccaacacaacctttgttatcattgac |
22875768 |
T |
|
| Q |
126 |
caatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggagtttt |
225 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||| |
|
|
| T |
22875767 |
caaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaacaggtttaattttagcttctcattatattcttggttggagtttt |
22875668 |
T |
|
| Q |
226 |
aaggttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
270 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22875667 |
aaggttaatggtcaagctcaaacccttgaaatctctgaacttcct |
22875623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 24 - 270
Target Start/End: Complemental strand, 22889248 - 22888993
Alignment:
| Q |
24 |
tatgaaggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgtt---------aaaccaacacgacctttg |
114 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||| | |||||||||| ||||||| |
|
|
| T |
22889248 |
tatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttactttagcaccaatgagtgttggtgctagtaataaaccaacacaacctttg |
22889149 |
T |
|
| Q |
115 |
ttatcattgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttg |
214 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||| ||| |
|
|
| T |
22889148 |
ttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcatcttcaacagggttaatggtagcttctcagtatattcttg |
22889049 |
T |
|
| Q |
215 |
gttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889048 |
gttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
22888993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 40 - 270
Target Start/End: Complemental strand, 22913605 - 22913375
Alignment:
| Q |
40 |
gaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgttaaaccaacacgacctttgttatcattgaccaatgatctttctc |
139 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||| ||||||||| |
|
|
| T |
22913605 |
gaatatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattgaacaaagatctttctt |
22913506 |
T |
|
| Q |
140 |
caattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggagttttaaggttaatggtca |
239 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||||| | | || | |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22913505 |
caattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattcttggttggagttttaaggttaatggtca |
22913406 |
T |
|
| Q |
240 |
agctcaaaaccttgaaatctctgaacttcct |
270 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |
|
|
| T |
22913405 |
agctcaaaatcttgtaatctctgaacttcct |
22913375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 24 - 329
Target Start/End: Complemental strand, 22893900 - 22893595
Alignment:
| Q |
24 |
tatgaaggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgttaaaccaacacgacctttgttatcattg |
123 |
Q |
| |
|
|||| |||||||||||||||||||||| | || ||||||||| |||||||||||||||||||| ||||||||||||||| || |||||||||||||||| |
|
|
| T |
22893900 |
tatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttatcattg |
22893801 |
T |
|
| Q |
124 |
accaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggagtt |
223 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||| ||||| | || || | | || | |||||||||||||| |||||||||||| |
|
|
| T |
22893800 |
accaaagatctttctccaattcttaacaatagtatgtatgttggattttcatcagctactggttcatttctaacttctcattatattcttggttggagtt |
22893701 |
T |
|
| Q |
224 |
ttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttgatgagnnnnnnnngtcaaaatttttaactgttgggtt |
323 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||||| || || |||| | |||| ||||| ||||||||||||||||| |
|
|
| T |
22893700 |
ttaagattaatggtcaagctcaaaaccttgtaatctctgaacttcctgagttaccagtattagctgagaaaacgaaatcaaattttttaactgttgggtt |
22893601 |
T |
|
| Q |
324 |
gccttt |
329 |
Q |
| |
|
|||||| |
|
|
| T |
22893600 |
gccttt |
22893595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 24 - 286
Target Start/End: Complemental strand, 22858418 - 22858144
Alignment:
| Q |
24 |
tatgaaggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgat------------gttgttaaaccaacacgacct |
111 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| || |||||||||||| |||||||| |
|
|
| T |
22858418 |
tatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctccaattaattttggttgtaatgttgttaaaccagcacgacct |
22858319 |
T |
|
| Q |
112 |
ttgttatcattgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatattt |
211 |
Q |
| |
|
||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || ||| |||||| ||||||||| |
|
|
| T |
22858318 |
ttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattctcatcttcaaccggggtaattgtagcttcccattatattc |
22858219 |
T |
|
| Q |
212 |
ttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttg |
286 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
22858218 |
ttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctgagctaagaatatttg |
22858144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 96 - 286
Target Start/End: Complemental strand, 22885500 - 22885310
Alignment:
| Q |
96 |
taaaccaacacgacctttgttatcattgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgca |
195 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
22885500 |
taaaccaacacaacctttgttatcattgaccaaagatctttctccaatactcaacaatagaatgtatgttggattctcatcttcaacagggttaattgta |
22885401 |
T |
|
| Q |
196 |
gcttctcattatatttttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttg |
286 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
22885400 |
gcttctcattatattcttggttggagttttaaggttaatagccaagctcaaaaccttgaaatctctgaacttcctgagccaagaatatttg |
22885310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 29 - 330
Target Start/End: Complemental strand, 22880542 - 22880233
Alignment:
| Q |
29 |
aggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgtt---------aaaccaacacgacctttgttatc |
119 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||| | ||||| |||||||| ||| ||||| | ||||||||||||| |||||| || |
|
|
| T |
22880542 |
aggtatggattgactatgatggagtgaagaaaaagattgaggttacattagctccgattagtgttggttttaataataaaccaacacgacatttgttgtc |
22880443 |
T |
|
| Q |
120 |
attgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttgg |
219 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||| || ||||||||||||| || |||||||| |
|
|
| T |
22880442 |
attgaccaaagatctttctccaattctcaacaatagtatgtatgttggattatcatcttcaacaaggttaattttagcttctcattatgttcttggttgg |
22880343 |
T |
|
| Q |
220 |
agttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttgatgagnnnnnnnngtcaaaatttttaactgttg |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || | |||||| ||| |||||||||||||||||||| |
|
|
| T |
22880342 |
agttttaaggttaatggtcaagctcaaaaccttgaaatctctgagcttcatgagccaatagtatttgctga-caaaaaaagtcaaaatttttaactgttg |
22880244 |
T |
|
| Q |
320 |
ggttgcctttg |
330 |
Q |
| |
|
|||| |||||| |
|
|
| T |
22880243 |
ggttacctttg |
22880233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 22830987 - 22830731
Alignment:
| Q |
24 |
tatgaaggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgtt---------aaaccaacacgacctttg |
114 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| || ||||| | |||||||||| ||| | |
|
|
| T |
22830987 |
tatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttaccttagctccagttagtgttggttttagtcataaaccaacacaaccgacg |
22830888 |
T |
|
| Q |
115 |
ttatcattgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttg |
214 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
22830887 |
ttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcagcttctcattatattcatg |
22830788 |
T |
|
| Q |
215 |
gttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctg |
271 |
Q |
| |
|
|||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
22830787 |
gttggagttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcctg |
22830731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 24 - 291
Target Start/End: Complemental strand, 22898219 - 22897952
Alignment:
| Q |
24 |
tatgaaggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgttaaaccaacacgacctttgttatcattg |
123 |
Q |
| |
|
|||| |||||||||||||||||||||| | || ||||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||| |||||| |
|
|
| T |
22898219 |
tatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttgtcattg |
22898120 |
T |
|
| Q |
124 |
accaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggagtt |
223 |
Q |
| |
|
|||| ||||||||||||||| | |||||||| |||||||||||||| ||||| | || || | | || |||||||||||||| |||||||||||| |
|
|
| T |
22898119 |
accagagatctttctccaattttaaacaatagtatgtatgttggattttcatcagctactggttcagttttcacttctcattatattcttggttggagtt |
22898020 |
T |
|
| Q |
224 |
ttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttgatgag |
291 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||| ||||| |||| |
|
|
| T |
22898019 |
ttaaggttaatggtcaagctgaaaaccttgtaatctctgaacttcctaagctaccaagatttggtgag |
22897952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 31 - 286
Target Start/End: Complemental strand, 22809593 - 22809326
Alignment:
| Q |
31 |
gtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttg------------ttaaaccaacacgacctttgttat |
118 |
Q |
| |
|
|||||||||||||||||||| | || ||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
22809593 |
gtatggattgaatatgatggtgaaaagaaaaagattgatgctactttagctccaattaatgttggttttaatgttgttaaaccaacacgacctttgttat |
22809494 |
T |
|
| Q |
119 |
cattgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttg |
218 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | || | ||||||||||| || ||||||| |
|
|
| T |
22809493 |
cattcaccaaagatctttctccaattcttaacactagtatgtatgttggattctcatcttcaacaggttctattctatcttctcattatgttcttggttg |
22809394 |
T |
|
| Q |
219 |
gagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttg |
286 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||| |
|
|
| T |
22809393 |
gagttttaaggttaatggtcaagctcaaaaccttgatatctctaaacttcctgagctaagaacatttg |
22809326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 31 - 271
Target Start/End: Complemental strand, 22840001 - 22839752
Alignment:
| Q |
31 |
gtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgtt---------aaaccaacacgacctttgttatcat |
121 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||| || ||||| | |||||||||| ||| |||||||| |
|
|
| T |
22840001 |
gtatggattgaatatgatagagtgaagaaaaagattgatgttaccttagctccatttagtgttggttttagtcataaaccaacacaaccgacgttatcat |
22839902 |
T |
|
| Q |
122 |
tgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggag |
221 |
Q |
| |
|
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
22839901 |
tgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggag |
22839802 |
T |
|
| Q |
222 |
ttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctg |
271 |
Q |
| |
|
||||| ||||||||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
22839801 |
ttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcctg |
22839752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 326
Target Start/End: Complemental strand, 22826205 - 22825903
Alignment:
| Q |
24 |
tatgaaggtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgttaaaccaacacgacctttgttatcattg |
123 |
Q |
| |
|
|||| |||||||||| ||||||||||| | || ||||||||| |||||||||||||||||||| ||||||||||||||| || ||||||||| |||||| |
|
|
| T |
22826205 |
tatgcaggtatggatagaatatgatggtgaaaataaaaagattgatgttactttagctccaattaatgttgttaaaccaaaacaacctttgttttcattg |
22826106 |
T |
|
| Q |
124 |
accaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggagtt |
223 |
Q |
| |
|
|||| |||||| |||||||| | |||||||| |||||||||||||||||||| | || || | | || |||||||||||||| ||||||| |||| |
|
|
| T |
22826105 |
accagagatcttcctccaattttgaacaatagtatgtatgttggattctcatcagctactggttcagttttcacttctcattatattcttggttgaagtt |
22826006 |
T |
|
| Q |
224 |
ttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatatttgatgagnnnnnnnngtcaaaatttttaactgttgggtt |
323 |
Q |
| |
|
||||| ||||||||||||||||||| |||| ||| |||||||||||| | ||| || ||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
22826005 |
ttaagcttaatggtcaagctcaaaatcttgtaatttctgaacttcctaaactacgaagatttggtgagaaaaaagagtccaaatttttaactgttgggtt |
22825906 |
T |
|
| Q |
324 |
gcc |
326 |
Q |
| |
|
||| |
|
|
| T |
22825905 |
gcc |
22825903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 31 - 285
Target Start/End: Original strand, 21150765 - 21151028
Alignment:
| Q |
31 |
gtatggattgaatatgatggagtgaacaaaaagattaatgttactttagctccaattgatgttgtt---------aaaccaacacgacctttgttatcat |
121 |
Q |
| |
|
|||||||||||||||||||| | || || ||||||||||||||||||||||||||| ||||| | |||||| || ||||||||||||||| |
|
|
| T |
21150765 |
gtatggattgaatatgatggtgaaaagaagaagattaatgttactttagctccaattagtgttggttttaataaaaaaccagcaagacctttgttatcat |
21150864 |
T |
|
| Q |
122 |
tgaccaatgatctttctccaattcttaacaatagaatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatatttttggttggag |
221 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21150865 |
tgaccaaagatctttctccagttctcaacaatagtatgtatgttggattctcatcttcaacagggttacttgcagcttctcattatattcttggttggag |
21150964 |
T |
|
| Q |
222 |
ttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcctgagctaacaatattt |
285 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
21150965 |
ttttaaggttaatggcctggctcaaaaccttgaaatctctgaacttcctgaagtaacagtattt |
21151028 |
T |
|
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