View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4598-Insertion-7 (Length: 484)
Name: NF4598-Insertion-7
Description: NF4598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4598-Insertion-7 |
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Alignment Details
Target: chr2 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 8 - 449
Target Start/End: Original strand, 40708718 - 40709167
Alignment:
| Q |
8 |
gaagagatttgataatccgcttagtggaataaggcttggtcgtccatattgaagagatttgatgaaaattgctgggaataaagagtttataggataaaag |
107 |
Q |
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| T |
40708718 |
gaagagatttgataatccgcttagtggaataaggcttggtcgtccatattgaagagatttgatgaaaattgctgggaataaagagtttataggataaaag |
40708817 |
T |
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| Q |
108 |
agaacatggaggataaagagtaagggagtgctgagttgtt------------gacaatagaaaaactcagtgagtatcaataatcaaatgttgctttggt |
195 |
Q |
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| T |
40708818 |
agaacatggaggataaagagtaagggagtgctgagttgttaagcggaggaaggacaatagaaaaactcagtgagtatcaataatcaaatgttgctttggt |
40708917 |
T |
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| Q |
196 |
tgatgaacatgattattgatcataagcaagcatgtgttgcacaatcaatcaagtgtcctttactcaattggtttaaatgcttaccgttatagagtttatc |
295 |
Q |
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| T |
40708918 |
tgatgaacatgattattgatcataagcaagcatgtgttgcacaat----caagtgtcctttactcaattggtttaaatgcttaccgttatagagtttatc |
40709013 |
T |
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| Q |
296 |
taaccgttgttcttaggctttcatggccattaatatcattgattttctatgaaaatgtggcaacggtaataaagaaattgattaagcatttagccacttg |
395 |
Q |
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| T |
40709014 |
taaccgttgttcttaggctttcatggccattaatatcattgattttctatgaaaatgtggcaacggtaatgaagaaattgattaagcatttagccacttg |
40709113 |
T |
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| Q |
396 |
caagatatataaaggacgcatggaaactatggcaggggaggaagtgatcaaaaa |
449 |
Q |
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| T |
40709114 |
caagatatataaaggacgcatggaaactatggccggggaggaagtgatcaaaaa |
40709167 |
T |
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