View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4600_low_12 (Length: 251)
Name: NF4600_low_12
Description: NF4600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4600_low_12 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 29907817 - 29907575
Alignment:
| Q |
9 |
gatatgaatatagatatcctcagttgacagaaactacttcgattgtaatgacgggcatttactgggtgttaattatcttttactgtgttcgttaatttta |
108 |
Q |
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| T |
29907817 |
gatatgaatataaatatcctcagttgacagaaactacttcgattgtaatgacgggcatttactgggtgttaattgtcttttactgtgttcgttaatttta |
29907718 |
T |
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| Q |
109 |
ttttagggtgaaaatgatggattttatcctgctgaaatgtataaattgtttgtttagggtgcagccctttcaccttctaatgctgcagaatctggggaga |
208 |
Q |
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| T |
29907717 |
ttttagggtgaaaatgatggattttatcctgctgaaatggataaattgtttgtttagggtgcagccctttcaccttctaatgctgcagaatctggggaga |
29907618 |
T |
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| Q |
209 |
ttgttggctctgctaaggtttgacctccaatttaatacccacc |
251 |
Q |
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| T |
29907617 |
ttgttggctctcctgaggtttgacctccaatttaatactcacc |
29907575 |
T |
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