View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4602-Insertion-12 (Length: 220)
Name: NF4602-Insertion-12
Description: NF4602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4602-Insertion-12 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 37220845 - 37221057
Alignment:
| Q |
8 |
cttacatttgacttaaacnnnnnnntaatagttgattggtttgtatgaattttaatattaatattattaagagttataattggaatgttcatatctcaca |
107 |
Q |
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| T |
37220845 |
cttacatttgacttaaacaaaaaaataatagttgattggtttgtatgaattttaatattaatattaataagagttataattggaatgttcatatctcaca |
37220944 |
T |
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| Q |
108 |
actggaagatttagatgtctttctcaaaatcctatttccattttccatatagcatgcataattgctaacaccaatttacatattcaagacacccaaattc |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
37220945 |
actggaagatttagatgtctttctcaaaatcctatttccattttccatatagcatgcataattgctaacaccagtttacatattcaagacacccaaattc |
37221044 |
T |
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| Q |
208 |
ttatctgtgttca |
220 |
Q |
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||||||||||||| |
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| T |
37221045 |
ttatctgtgttca |
37221057 |
T |
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