View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4603-Insertion-12 (Length: 315)

Name: NF4603-Insertion-12
Description: NF4603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4603-Insertion-12
NF4603-Insertion-12
[»] chr7 (1 HSPs)
chr7 (8-315)||(42661717-42662024)


Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 8 - 315
Target Start/End: Original strand, 42661717 - 42662024
Alignment:
Q  8 gaatctgtgtcctttcttctggatcctttatctatactgttgcgcattatttccaacaaaatgctattgtatttcttggcttgggttgctcgattataat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42661717 gaatctgtgtcctttcttctggatcctttatctatactgttgcgcattatttccaacaaaatggtattgtatttcttggcttgggttgctcgattataat 42661816  T
Q  108 ggcaactatcaagtacataattttgttgctggggattgtaacaccagatttatgtcaagagagttgttcttgcatgcatcgatttgaacaataatatgca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42661817 ggcaactatcaagtacataattttgttgctggggattgtaacaccagatttatgtcaagagagttgttcttgcatgcatcgatttgaacaataatatgca 42661916  T
Q  208 ttgtcattgacagaagaggagaaacaatacggttggtaaagctatgagtcacgttaatctacacacatgttacatacttaagggaaatgataataagtat 307  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42661917 ttgtcattgacaaaagaggagaaacaatacggttggtaaagctatgagtcacgttaatctacacacatgttacatacttaagggaaatgataataagtat 42662016  T
Q  308 tattagag 315  Q
    ||||||||    
T  42662017 tattagag 42662024  T

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