View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4603-Insertion-2 (Length: 860)
Name: NF4603-Insertion-2
Description: NF4603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4603-Insertion-2 |
 | |
|
| [»] chr7 (3 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 817; Significance: 0; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 817; E-Value: 0
Query Start/End: Original strand, 12 - 860
Target Start/End: Complemental strand, 36524143 - 36523295
Alignment:
| Q |
12 |
gatgtggaagaagacaaagagttcgttaacacatcaacttggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtggttt |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36524143 |
gatgtggaagaagacaaagagttcgttaacacatcaactcggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtggttt |
36524044 |
T |
|
| Q |
112 |
gtcgctattctgattctaatggttatgatggccttcgtagcttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttctctag |
211 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36524043 |
gtcgctattctgattctaatggttatgattgccttcgtagcttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttctctag |
36523944 |
T |
|
| Q |
212 |
caattgcattgatcttcaccttgccaattggtgttattcaagcaacaacaaacataagaaaaggtcttaatgtgatcacagagttggtaattggtttcat |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36523943 |
caattgcattgatcttcaccttgccaattggtgttattcaagcaacaacaaacataagaaaaggtcttaatgtgatcacagagttggtaattggtttcat |
36523844 |
T |
|
| Q |
312 |
ctatcctggaaagccacttgctgatgtagctttcaaaacatatggccatatcagcatggtacaagcactagggtttcttgaagacttcaaattaggccat |
411 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36523843 |
ctatcctggaaagccacttgctaatgtagctttcaaaacatatggccacatcagcatggtacaagcactagggtttcttgaagacttcaaattaggccat |
36523744 |
T |
|
| Q |
412 |
tatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatctgtccactttggagcagcatggtggcttctaactt |
511 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36523743 |
tatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatctgtccactttggaacagcatggtggcttctaactt |
36523644 |
T |
|
| Q |
512 |
ctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgatgatgtattttacaatgcttcaatcatctggggagt |
611 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36523643 |
ctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgatgatgtattttacaatgcttcaatcatctggggagt |
36523544 |
T |
|
| Q |
612 |
tgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttccttattggtctacttgcacctgttccagtgtggcttctt |
711 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36523543 |
tgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttccttattggtctacttgcacctgttccagtgtggcttctt |
36523444 |
T |
|
| Q |
712 |
tctctcaaatttcgtaaccaaaagtggattcaactcattaacattcctattatcgccgcaggtgcatctggcattccaccagtgagatctgtgaattaca |
811 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36523443 |
tctctcaaatttcgtaaccaaaagtggattcaactcattaacattcctattatcgccgcaggtgcatctggcattccaccagtgagatctgtgaattaca |
36523344 |
T |
|
| Q |
812 |
ttacttggggacttggtgggatggttttcaatttctatgtttatagaaa |
860 |
Q |
| |
|
||||||||||| ||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
36523343 |
ttacttggggaattgttggaatggttttcaatttctatgtttatagaaa |
36523295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 8 - 860
Target Start/End: Complemental strand, 36530980 - 36530128
Alignment:
| Q |
8 |
ttcagatgtggaagaagacaaagagttcgttaacacatcaacttggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtg |
107 |
Q |
| |
|
||||||||||||||||||||| | ||| |||| | | |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
36530980 |
ttcagatgtggaagaagacaacaacttcattaaaaaaccaacttggagatgtccatacaagaattatgaagaaaaactatgaacaagtccctgaatggtg |
36530881 |
T |
|
| Q |
108 |
gtttgtcgctattctgattctaatggttatgatggccttcgtagcttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttct |
207 |
Q |
| |
|
||||||| | ||| | ||| ||||||||||||||||||| |||| ||||||||||| || || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
36530880 |
gtttgtcaccattttaattttaatggttatgatggccttactagcctgcgaaggcttcggcaagcagctccaacttccatggtggggaatcttactttct |
36530781 |
T |
|
| Q |
208 |
ctagcaattgcattgatcttcaccttgccaattggtgttattcaagcaacaacaaacataagaaaaggtcttaatgtgatcacagagttggtaattggtt |
307 |
Q |
| |
|
||| |||||||||| || |||||||| ||||||||||| ||| |||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
36530780 |
ctaacaattgcattaattttcaccttaccaattggtgtcattgaagcaacaacaaacataagatcaggtctcaatgtaatcacagagttagtaattggtt |
36530681 |
T |
|
| Q |
308 |
tcatctatcctggaaagccacttgctgatgtagctttcaaaacatatggccatatcagcatggtacaagcactagggtttcttgaagacttcaaattagg |
407 |
Q |
| |
|
|||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
36530680 |
tcatctatccaggaaagccgcttgctaatgtagctttcaaaacatatggccatatcagtatggtacaagcacttggttttcttggtgacttcaaattagg |
36530581 |
T |
|
| Q |
408 |
ccattatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatctgtccactttggagcagcatggtggcttcta |
507 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||||||| || |||||||| |||||| |||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
36530580 |
ccactatatgaaaattgcaccaaaatcaatgttcattgtgcaacttgtaggcacagtagttgcttcatctgttcactttggaaccgcatggtggcttcta |
36530481 |
T |
|
| Q |
508 |
acttctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgatgatgtattttacaatgcttcaatcatctggg |
607 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36530480 |
acatctattgagaacatatgtgatgaatcattattgccaaaaggtagtccttggacatgtcctggtgatgatgtattttacaatgcttcaatcatctggg |
36530381 |
T |
|
| Q |
608 |
gagttgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttccttattggtctacttgcacctgttccagtgtggct |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| |||||| | ||||| ||||| |||||||| |
|
|
| T |
36530380 |
gagttgtagggccaaagagaatgtttaccaaagacggtgtttatcccgaattgaattggtttttccttatcggtctaatcgcaccagttcccgtgtggct |
36530281 |
T |
|
| Q |
708 |
tctttctctcaaatttcgtaaccaaaagtggattcaactcattaacattcctattatcgccgcaggtgcatctggcattccaccagtgagatctgtgaat |
807 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
36530280 |
tctttctctcaaatttcccaaccaaaagtggattcaattcatcaacattcctattatcattgcaggtgcatctgacatcccacctgtgagatctgtgaat |
36530181 |
T |
|
| Q |
808 |
tacattacttggggacttggtgggatggttttcaatttctatgtttatagaaa |
860 |
Q |
| |
|
|| ||||||||||| ||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
36530180 |
tatattacttgggggattgttggaatatttttcaatttctatgtttatagaaa |
36530128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 8 - 860
Target Start/End: Complemental strand, 36536592 - 36535740
Alignment:
| Q |
8 |
ttcagatgtggaagaagacaaagagttcgttaacacatcaacttggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtg |
107 |
Q |
| |
|
||||||||||||||||||||| || ||| ||| | | |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
36536592 |
ttcagatgtggaagaagacaacgacttcactaaaaaaccaacttggagatgtccatacaagaattatgaagaaaaactatgaacaagtccctgagtggtg |
36536493 |
T |
|
| Q |
108 |
gtttgtcgctattctgattctaatggttatgatggccttcgtagcttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttct |
207 |
Q |
| |
|
||||||||| ||| | ||| ||||||||||||||||||| |||| || |||||||| || || |||||||||||||||||||||||||||||||| || |
|
|
| T |
36536492 |
gtttgtcgccattttaattttaatggttatgatggccttactagcctgtgaaggcttcggcaagcagctccaacttccatggtggggaatcttactatca |
36536393 |
T |
|
| Q |
208 |
ctagcaattgcattgatcttcaccttgccaattggtgttattcaagcaacaacaaacataagaaaaggtcttaatgtgatcacagagttggtaattggtt |
307 |
Q |
| |
|
||| |||||||||| | |||||||| ||||||||||| ||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36536392 |
ctatcaattgcattagttttcaccttaccaattggtgtcattgaagcaacaacaagcgcaagaacaggtcttaatgtgatcacagagttggtaattggtt |
36536293 |
T |
|
| Q |
308 |
tcatctatcctggaaagccacttgctgatgtagctttcaaaacatatggccatatcagcatggtacaagcactagggtttcttgaagacttcaaattagg |
407 |
Q |
| |
|
||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| | |||||||||||||| |
|
|
| T |
36536292 |
tcacctatccaggaaagccactagctaatgtagctttcaaaacatatggccatacgagcatggtacaagcacttggttttctcggtgacttcaaattagg |
36536193 |
T |
|
| Q |
408 |
ccattatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatctgtccactttggagcagcatggtggcttcta |
507 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
36536192 |
ccactatatgaaaattccaccaaaatcaatgtttattgtgcagctagtcggcactgtagtttctttgtctgtccactttggaacagcatggtggcttcta |
36536093 |
T |
|
| Q |
508 |
acttctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgatgatgtattttacaatgcttcaatcatctggg |
607 |
Q |
| |
|
|| ||||| |||||||||||||||||||| || ||||| ||||| ||||||||||| |||||||||||||||| ||||||||||||||| || || |||| |
|
|
| T |
36536092 |
acatctatagagaacatatgtgatgaatcgttgttgccgaaaggtagtccttggacgtgtcctggtgatgatgcattttacaatgcttccattatatggg |
36535993 |
T |
|
| Q |
608 |
gagttgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttccttattggtctacttgcacctgttccagtgtggct |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| || |||||||| |
|
|
| T |
36535992 |
gagttgtagggccaaagagaatgtttaccaatgacggcgtttatcctgggatgaattggtttttccttattggcctaattgcacctgtaccggtgtggct |
36535893 |
T |
|
| Q |
708 |
tctttctctcaaatttcgtaaccaaaagtggattcaactcattaacattcctattatcgccgcaggtgcatctggcattccaccagtgagatctgtgaat |
807 |
Q |
| |
|
||||||| ||||||||| |||||| ||||||||| |||| || ||||||||||||||| | |||||||||| ||||| || ||||||||||||| |
|
|
| T |
36535892 |
tctttctatcaaatttcctaaccacaagtggattaaacttatcaacattcctattatcattgtaggtgcatctactattcctcccaggagatctgtgaat |
36535793 |
T |
|
| Q |
808 |
tacattacttggggacttggtgggatggttttcaatttctatgtttatagaaa |
860 |
Q |
| |
|
|| |||||||||||| ||| ||| ||| ||||||||||||||||||||||||| |
|
|
| T |
36535792 |
tatattacttggggaattgttggaatgtttttcaatttctatgtttatagaaa |
36535740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 132; Significance: 4e-68; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 280 - 755
Target Start/End: Original strand, 42059513 - 42059988
Alignment:
| Q |
280 |
aatgtgatcacagagttggtaattggtttcatctatcctggaaagccacttgctgatgtagctttcaaaacatatggccatatcagcatggtacaagcac |
379 |
Q |
| |
|
|||||||||||||||||| | ||||| ||| | || || |||||||| |||||| ||||||| ||||| || ||||| | |||||||||| ||| |||| |
|
|
| T |
42059513 |
aatgtgatcacagagttgatcattgggttcctttaccccggaaagcctcttgctaatgtagccttcaagacttatggatacatcagcatggcacaggcac |
42059612 |
T |
|
| Q |
380 |
tagggtttcttgaagacttcaaattaggccattatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatctgt |
479 |
Q |
| |
|
| | || |||||||||||||||||||| || || ||||||||||| |||||| | |||||||| || || | ||||| ||| | ||| ||||| ||| |
|
|
| T |
42059613 |
ttagtttccttgaagacttcaaattaggacactacatgaaaattcctccaaaagctatgttcatagtacaattggtaggaactttggttgcttcaagtgt |
42059712 |
T |
|
| Q |
480 |
ccactttggagcagcatggtggcttctaacttctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgatgat |
579 |
Q |
| |
|
|||| | ||||||||||||||||||| |||| ||||||||||||| |||| | ||||| | || ||||| ||||| ||||||||||||||| |
|
|
| T |
42059713 |
atacttcagcacagcatggtggcttctaacaactattccaaacatatgtgatgcatcaatgttgcctgagggtagtccatggacttgtcctggtgatgat |
42059812 |
T |
|
| Q |
580 |
gtattttacaatgcttcaatcatctggggagttgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttccttattg |
679 |
Q |
| |
|
|| |||||||||||||||||||| |||||||| ||||| ||| | || ||||||||||| || || |||| |||| ||||||||||||||||| || | |
|
|
| T |
42059813 |
gtgttttacaatgcttcaatcatatggggagtagtaggaccacaaaggatgtttaccaaggatggaatttaccctggaatgaattggtttttcctcatcg |
42059912 |
T |
|
| Q |
680 |
gtctacttgcacctgttccagtgtggcttctttctctcaaatttcgtaaccaaaagtggattcaactcattaacat |
755 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||| ||||| | ||||| ||||||||| ||||||| ||||| |
|
|
| T |
42059913 |
gtctacttgcgcctgttccagtgtggcttctagctcgcaaatacccgaaccacaagtggattgaactcatcaacat |
42059988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 277 - 765
Target Start/End: Original strand, 42074807 - 42075295
Alignment:
| Q |
277 |
cttaatgtgatcacagagttggtaattggtttcatctatcctggaaagccacttgctgatgtagctttcaaaacatatggccatatcagcatggtacaag |
376 |
Q |
| |
|
||||||||||||||||||||| | ||||| | | | || ||||||||||| ||||| ||||||| ||||| || ||||| | |||||||||| ||| | |
|
|
| T |
42074807 |
cttaatgtgatcacagagttgatcattgggtacctataccctggaaagcctcttgccaatgtagccttcaagacttatggatacatcagcatggcacagg |
42074906 |
T |
|
| Q |
377 |
cactagggtttcttgaagacttcaaattaggccattatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatc |
476 |
Q |
| |
|
|||| | || ||| |||||||||||||||| | || ||||||||||| |||||||| |||||||| || ||| | ||||| ||| | ||| ||||| |
|
|
| T |
42074907 |
cacttagtttccttcaagacttcaaattaggtctctacatgaaaattcctccaaaatctatgttcatagtacagttggtaggaactttggttgcttcaag |
42075006 |
T |
|
| Q |
477 |
tgtccactttggagcagcatggtggcttctaacttctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgat |
576 |
Q |
| |
|
||| |||| || ||||||||||||||||||| |||| ||||||| ||| ||||| | |||||| | || ||||| ||||| ||||||||||| |
|
|
| T |
42075007 |
tgtatacttcggcacagcatggtggcttctaacgactattccacacatatgcgataaatcaatgttgccagatggtagtccatggacttgtcctggtgac |
42075106 |
T |
|
| Q |
577 |
gatgtattttacaatgcttcaatcatctggggagttgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttcctta |
676 |
Q |
| |
|
|| || |||||||||||||||||||| |||||| | ||||| ||||| || ||||| ||||| || || | || |||| |||||||||||||||| | |
|
|
| T |
42075107 |
gaggttttttacaatgcttcaatcatatggggaatagtaggaccaaaaaggatgttcaccaaggatggaatataccctggattgaattggtttttcctca |
42075206 |
T |
|
| Q |
677 |
ttggtctacttgcacctgttccagtgtggcttctttctctcaaatttcgtaaccaaaagtggattcaactcattaacattcctattatc |
765 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||| ||| ||||| | |||| |||||||||| ||||| | ||||| || |||||| |
|
|
| T |
42075207 |
tcggtctacttgcgcctgttccagtgtggcttctagctcgcaaatacccaaaccgaaagtggattgaactcgtcaacatgccaattatc |
42075295 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 277 - 755
Target Start/End: Original strand, 42083387 - 42083865
Alignment:
| Q |
277 |
cttaatgtgatcacagagttggtaattggtttcatctatcctggaaagccacttgctgatgtagctttcaaaacatatggccatatcagcatggtacaag |
376 |
Q |
| |
|
||||||||||||||||||||| | || || | | | || || |||||||| ||||| ||||||| ||||| || ||||| | || |||||| ||| | |
|
|
| T |
42083387 |
cttaatgtgatcacagagttgatcatcgggtacctataccccggaaagcctcttgccaatgtagccttcaagacttatggatacatgagcatgtcacagg |
42083486 |
T |
|
| Q |
377 |
cactagggtttcttgaagacttcaaattaggccattatatgaaaattccaccaaaatcaatgttcattgtgcagctagtaggcactgtagtttcttcatc |
476 |
Q |
| |
|
|||| | || ||| |||||||||||||||| || || ||||||||||| |||||||| |||||||| ||||| | ||||| ||| | ||||||||| |
|
|
| T |
42083487 |
cacttagtttccttcaagacttcaaattaggacactacatgaaaattcctccaaaatctatgttcatagtgcaattggtaggaactttggtttcttcaag |
42083586 |
T |
|
| Q |
477 |
tgtccactttggagcagcatggtggcttctaacttctatcgagaacatatgtgatgaatcattattgccaaaaggaagtccttggacatgtcctggtgat |
576 |
Q |
| |
|
||| ||| | ||||||||||||||||||| |||| ||||||| ||| ||||| | |||||| | || ||||| ||||| |||||||||||| |
|
|
| T |
42083587 |
tgtatgcttcagcacagcatggtggcttctaacaactattccacacatatgcgataaatcaatgttgccagatggtagtccatggacttgtcctggtgat |
42083686 |
T |
|
| Q |
577 |
gatgtattttacaatgcttcaatcatctggggagttgtagggccaaagagaatgtttaccaaagacggcgtttatcctgagatgaattggtttttcctta |
676 |
Q |
| |
|
|| || |||||||||||||||||||| |||||| | ||||| ||||| || ||||| ||||| || || | || |||| ||||||||||||||||| | |
|
|
| T |
42083687 |
gaggttttttacaatgcttcaatcatatggggaatagtaggaccaaaaaggatgttcaccaaggatggaatataccctggaatgaattggtttttcctca |
42083786 |
T |
|
| Q |
677 |
ttggtctacttgcacctgttccagtgtggcttctttctctcaaatttcgtaaccaaaagtggattcaactcattaacat |
755 |
Q |
| |
|
| ||||||||||| |||||||| |||||| |||| ||| ||||| | ||||| ||||||||| ||||||| ||||| |
|
|
| T |
42083787 |
tcggtctacttgcgcctgttccggtgtggtttctagctcgcaaatacccgaaccacaagtggattgaactcatcaacat |
42083865 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 264
Target Start/End: Original strand, 42082985 - 42083198
Alignment:
| Q |
51 |
tggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtggtttgtcgctattctgattctaatggttatgatggccttcgta |
150 |
Q |
| |
|
||||||||| || |||||| ||||||||| |||||||||||| |||||||| |||||||| | | ||| || |||| |||||||| ||||||| | |
|
|
| T |
42082985 |
tggagatgtacacacaagactcatgaagagaaactatgaacaagtccctgagtggtggttcatgaccattttggttcttatggttattttggccttggcg |
42083084 |
T |
|
| Q |
151 |
gcttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttctctagcaattgcattgatcttcaccttgccaattggtgttattc |
250 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||| |||| ||||||||| ||||||||||| | ||||| |||||| ||||||| || | |
|
|
| T |
42083085 |
tgttgcgaaggctttgacaagcagctccaacttccatggtggggagtcttgctttctctatcaattgcattggtattcactttgccagttggtgtcatcc |
42083184 |
T |
|
| Q |
251 |
aagcaacaacaaac |
264 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
42083185 |
aagcaacaacaaac |
42083198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 51 - 264
Target Start/End: Original strand, 42059089 - 42059302
Alignment:
| Q |
51 |
tggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtggtttgtcgctattctgattctaatggttatgatggccttcgta |
150 |
Q |
| |
|
|||||| || ||||||||| ||||||||| |||||||||||| |||||||| |||||||| | ||| || |||| |||||||| ||||||| | |
|
|
| T |
42059089 |
tggagacgtacatacaagactcatgaagagaaactatgaacaagtccctgagtggtggttcatgatcattttggttcttatggttattttggccttggcg |
42059188 |
T |
|
| Q |
151 |
gcttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttctctagcaattgcattgatcttcaccttgccaattggtgttattc |
250 |
Q |
| |
|
||| ||||||||||| || |||||||||||||| ||||||||| |||| ||||||||| |||||||||| | ||||| |||||||||||||| || | |
|
|
| T |
42059189 |
tgttgtgaaggctttggcaagcagctccaacttccttggtggggagtcttgctttctctattaattgcattggttttcactttgccaattggtgtcatcc |
42059288 |
T |
|
| Q |
251 |
aagcaacaacaaac |
264 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
42059289 |
aagcaacaacaaac |
42059302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 52 - 260
Target Start/End: Original strand, 42074462 - 42074670
Alignment:
| Q |
52 |
ggagatgtgcatacaagaatcatgaagaaaaactatgaacaggtccctgactggtggtttgtcgctattctgattctaatggttatgatggccttcgtag |
151 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||||| | |||||| |||||||| | | ||| || |||| ||| |||| ||||||| | |
|
|
| T |
42074462 |
ggagacgtgcatacaagaatcatgaagagaaactatgaacaagcccctgagtggtggttcatgaccattttggttcttatgattattttggccttggcgt |
42074561 |
T |
|
| Q |
152 |
cttgcgaaggctttggaaaacagctccaacttccatggtggggaatcttactttctctagcaattgcattgatcttcaccttgccaattggtgttattca |
251 |
Q |
| |
|
||| |||||||||| ||||| ||||||||||||||||||||| |||| ||||| ||| |||||||||| | ||||| |||||| ||||||| ||||| |
|
|
| T |
42074562 |
gttgtgaaggctttgacaaacaactccaacttccatggtggggagtcttgctttccctattaattgcattggttttcactttgccagttggtgtcattca |
42074661 |
T |
|
| Q |
252 |
agcaacaac |
260 |
Q |
| |
|
||||||||| |
|
|
| T |
42074662 |
agcaacaac |
42074670 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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