View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4603-Insertion-4 (Length: 826)

Name: NF4603-Insertion-4
Description: NF4603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4603-Insertion-4
NF4603-Insertion-4
[»] chr5 (34 HSPs)
chr5 (201-826)||(1425958-1426582)
chr5 (16-113)||(13811650-13811746)
chr5 (16-113)||(18520890-18520986)
chr5 (18-113)||(14831814-14831908)
chr5 (16-113)||(36732948-36733044)
chr5 (17-113)||(2740273-2740368)
chr5 (18-113)||(40145407-40145501)
chr5 (18-113)||(42414308-42414402)
chr5 (18-113)||(33149644-33149738)
chr5 (18-113)||(35785199-35785293)
chr5 (18-113)||(35943898-35943992)
chr5 (15-113)||(15409616-15409713)
chr5 (18-113)||(28177775-28177869)
chr5 (17-113)||(6679697-6679792)
chr5 (16-113)||(31008986-31009082)
chr5 (17-110)||(41470425-41470517)
chr5 (143-201)||(2740398-2740457)
chr5 (18-113)||(20073522-20073616)
chr5 (18-113)||(26720516-26720610)
chr5 (18-113)||(26990265-26990359)
chr5 (143-201)||(33149555-33149614)
chr5 (19-78)||(36875644-36875702)
chr5 (143-200)||(14831938-14831996)
chr5 (143-200)||(35785323-35785381)
chr5 (16-109)||(3921275-3921367)
chr5 (143-201)||(18520801-18520860)
chr5 (18-99)||(6260021-6260101)
chr5 (18-87)||(33825356-33825424)
chr5 (17-109)||(2252178-2252269)
chr5 (67-111)||(31132392-31132436)
chr5 (143-201)||(40145531-40145590)
chr5 (41-87)||(16327923-16327969)
chr5 (143-200)||(31132458-31132516)
chr5 (143-188)||(36732872-36732918)
[»] chr2 (46 HSPs)
chr2 (14-113)||(10249388-10249486)
chr2 (17-113)||(32505654-32505749)
chr2 (14-113)||(9058476-9058574)
chr2 (18-113)||(13438343-13438437)
chr2 (16-113)||(30915461-30915557)
chr2 (16-113)||(33436106-33436202)
chr2 (17-113)||(5574494-5574589)
chr2 (21-113)||(28863458-28863549)
chr2 (18-113)||(28381661-28381755)
chr2 (17-113)||(7465741-7465836)
chr2 (18-113)||(17473020-17473114)
chr2 (18-113)||(40701478-40701572)
chr2 (18-113)||(4060685-4060779)
chr2 (21-113)||(19930826-19930917)
chr2 (18-113)||(27864704-27864798)
chr2 (11-113)||(42257186-42257287)
chr2 (16-113)||(20700813-20700909)
chr2 (16-99)||(38882834-38882915)
chr2 (18-113)||(40613908-40614002)
chr2 (17-113)||(33436210-33436305)
chr2 (143-205)||(10249295-10249358)
chr2 (16-113)||(26891510-26891606)
chr2 (16-113)||(38273148-38273244)
chr2 (143-202)||(4060809-4060869)
chr2 (143-201)||(7465652-7465711)
chr2 (144-206)||(32505560-32505623)
chr2 (18-109)||(43490121-43490211)
chr2 (143-200)||(5574418-5574476)
chr2 (143-200)||(13438467-13438525)
chr2 (143-200)||(17473144-17473202)
chr2 (143-200)||(28863579-28863637)
chr2 (143-200)||(30915587-30915645)
chr2 (17-113)||(2533123-2533217)
chr2 (143-202)||(40701602-40701662)
chr2 (18-113)||(17820010-17820104)
chr2 (143-201)||(19930737-19930796)
chr2 (18-109)||(38732354-38732444)
chr2 (143-204)||(27864815-27864877)
chr2 (17-111)||(36168835-36168928)
chr2 (143-200)||(38882729-38882787)
chr2 (150-202)||(28381571-28381624)
chr2 (62-113)||(3737986-3738037)
chr2 (143-200)||(9058604-9058662)
chr2 (147-188)||(20700943-20700985)
chr2 (24-113)||(3439985-3440073)
chr2 (144-188)||(40613832-40613877)
[»] chr4 (36 HSPs)
chr4 (9-113)||(48183055-48183158)
chr4 (18-113)||(11511468-11511562)
chr4 (18-113)||(54473539-54473633)
chr4 (16-113)||(480453-480549)
chr4 (15-113)||(23608232-23608329)
chr4 (16-113)||(50052434-50052530)
chr4 (18-113)||(41236347-41236441)
chr4 (16-113)||(29239884-29239980)
chr4 (18-113)||(6034044-6034138)
chr4 (16-113)||(24995113-24995209)
chr4 (16-113)||(42044373-42044469)
chr4 (18-112)||(50526178-50526271)
chr4 (17-113)||(29234251-29234346)
chr4 (18-113)||(3481654-3481748)
chr4 (18-113)||(31910192-31910286)
chr4 (15-113)||(48647732-48647829)
chr4 (144-211)||(48182955-48183024)
chr4 (9-113)||(29977876-29977979)
chr4 (143-202)||(41236471-41236531)
chr4 (144-206)||(24995019-24995082)
chr4 (143-201)||(42044284-42044343)
chr4 (9-84)||(55475182-55475256)
chr4 (143-200)||(6034168-6034226)
chr4 (63-113)||(41823926-41823976)
chr4 (143-206)||(23608359-23608423)
chr4 (18-86)||(40574779-40574846)
chr4 (23-111)||(53352574-53352660)
chr4 (144-204)||(11511377-11511437)
chr4 (16-109)||(19670726-19670818)
chr4 (17-113)||(28480274-28480369)
chr4 (17-113)||(28481149-28481244)
chr4 (17-113)||(28482024-28482119)
chr4 (18-84)||(8343198-8343263)
chr4 (13-87)||(47104539-47104612)
chr4 (18-84)||(55079749-55079814)
chr4 (15-84)||(29547994-29548062)
[»] chr8 (39 HSPs)
chr8 (18-113)||(12831047-12831141)
chr8 (14-113)||(14547918-14548016)
chr8 (18-113)||(504127-504221)
chr8 (18-113)||(15197333-15197427)
chr8 (18-113)||(1179946-1180040)
chr8 (18-113)||(23122603-23122697)
chr8 (16-113)||(10284637-10284733)
chr8 (17-113)||(37038478-37038573)
chr8 (18-113)||(34012302-34012396)
chr8 (18-113)||(40423949-40424043)
chr8 (19-113)||(5957831-5957924)
chr8 (17-111)||(44507095-44507188)
chr8 (41-113)||(8841438-8841510)
chr8 (18-113)||(15048188-15048281)
chr8 (143-205)||(1179853-1179916)
chr8 (143-200)||(504039-504097)
chr8 (15-113)||(4854869-4854966)
chr8 (23-113)||(10621093-10621182)
chr8 (143-200)||(23122515-23122573)
chr8 (18-87)||(20074966-20075034)
chr8 (143-201)||(14548046-14548105)
chr8 (143-201)||(34012213-34012272)
chr8 (18-113)||(43414587-43414681)
chr8 (143-200)||(9122309-9122367)
chr8 (143-200)||(12831171-12831229)
chr8 (18-84)||(30479509-30479574)
chr8 (18-99)||(14055612-14055692)
chr8 (16-109)||(16383375-16383467)
chr8 (16-84)||(34307214-34307281)
chr8 (17-108)||(17443824-17443914)
chr8 (143-201)||(42710211-42710270)
chr8 (63-113)||(9122229-9122279)
chr8 (15-113)||(15258935-15259032)
chr8 (143-200)||(44507006-44507063)
chr8 (16-113)||(42221513-42221609)
chr8 (15-82)||(24307830-24307896)
chr8 (16-82)||(24307627-24307692)
chr8 (143-188)||(43414511-43414557)
chr8 (16-109)||(16056411-16056503)
[»] chr7 (43 HSPs)
chr7 (16-113)||(8080389-8080485)
chr7 (18-113)||(38267040-38267134)
chr7 (15-113)||(7389386-7389483)
chr7 (16-113)||(19436193-19436289)
chr7 (17-113)||(36361919-36362014)
chr7 (18-113)||(19329842-19329936)
chr7 (16-113)||(38837215-38837311)
chr7 (17-113)||(3434561-3434656)
chr7 (21-113)||(3783998-3784089)
chr7 (17-113)||(36362025-36362120)
chr7 (18-113)||(4999520-4999614)
chr7 (18-113)||(35137533-35137627)
chr7 (16-113)||(40957705-40957801)
chr7 (21-113)||(3694370-3694461)
chr7 (19-113)||(32951499-32951592)
chr7 (18-109)||(8238212-8238303)
chr7 (18-113)||(21234401-21234495)
chr7 (41-111)||(46033809-46033879)
chr7 (143-201)||(19329966-19330025)
chr7 (18-113)||(46374808-46374902)
chr7 (143-202)||(4999430-4999490)
chr7 (147-202)||(8080299-8080355)
chr7 (16-80)||(35468894-35468957)
chr7 (14-113)||(36208169-36208267)
chr7 (143-201)||(38837341-38837400)
chr7 (18-109)||(39255934-39256023)
chr7 (143-209)||(40957831-40957898)
chr7 (143-200)||(3434676-3434734)
chr7 (23-113)||(35522881-35522970)
chr7 (16-85)||(10343597-10343665)
chr7 (17-110)||(26296643-26296735)
chr7 (16-109)||(38044195-38044287)
chr7 (143-202)||(32951409-32951469)
chr7 (143-201)||(7389513-7389571)
chr7 (17-84)||(22343360-22343426)
chr7 (143-201)||(36362138-36362197)
chr7 (16-109)||(11044186-11044268)
chr7 (16-109)||(7727904-7727996)
chr7 (16-113)||(18207178-18207273)
chr7 (143-202)||(36361841-36361901)
chr7 (17-109)||(41915740-41915831)
chr7 (12-43)||(40957864-40957895)
chr7 (143-188)||(19436117-19436163)
[»] chr1 (39 HSPs)
chr1 (16-113)||(2581913-2582009)
chr1 (18-113)||(48716288-48716382)
chr1 (18-113)||(9474882-9474976)
chr1 (16-113)||(8346394-8346490)
chr1 (16-113)||(38632327-38632423)
chr1 (18-113)||(43132-43226)
chr1 (18-113)||(3000319-3000413)
chr1 (18-113)||(27564741-27564835)
chr1 (16-113)||(38595152-38595248)
chr1 (21-113)||(44548382-44548473)
chr1 (17-113)||(51898689-51898784)
chr1 (18-113)||(47452326-47452420)
chr1 (13-113)||(49811533-49811632)
chr1 (17-113)||(50630457-50630552)
chr1 (16-113)||(32813245-32813341)
chr1 (17-113)||(41758804-41758899)
chr1 (18-113)||(37649198-37649292)
chr1 (45-113)||(13414787-13414855)
chr1 (14-98)||(26274428-26274511)
chr1 (19-112)||(11152385-11152476)
chr1 (143-202)||(27564651-27564711)
chr1 (16-87)||(23597123-23597193)
chr1 (143-200)||(41758929-41758987)
chr1 (143-200)||(48716200-48716258)
chr1 (143-199)||(37649322-37649379)
chr1 (41-113)||(45044566-45044638)
chr1 (16-109)||(5959010-5959102)
chr1 (150-202)||(38595285-38595338)
chr1 (150-200)||(3000450-3000501)
chr1 (143-201)||(9474793-9474852)
chr1 (18-109)||(50591010-50591100)
chr1 (143-203)||(26274553-26274614)
chr1 (143-202)||(43256-43316)
chr1 (41-113)||(26440756-26440828)
chr1 (143-186)||(38632253-38632297)
chr1 (63-113)||(6260914-6260964)
chr1 (41-87)||(37926470-37926516)
chr1 (147-200)||(47452238-47452292)
chr1 (143-187)||(45044491-45044536)
[»] chr3 (39 HSPs)
chr3 (13-113)||(53982006-53982105)
chr3 (18-113)||(33644200-33644294)
chr3 (15-113)||(54868901-54868998)
chr3 (16-113)||(49607412-49607508)
chr3 (19-113)||(31456690-31456783)
chr3 (23-113)||(52629305-52629394)
chr3 (16-113)||(27714897-27714993)
chr3 (15-95)||(11095377-11095456)
chr3 (17-113)||(17470404-17470499)
chr3 (18-113)||(8076393-8076487)
chr3 (15-98)||(33118872-33118954)
chr3 (22-109)||(48587101-48587187)
chr3 (16-98)||(36707445-36707526)
chr3 (17-99)||(35536625-35536706)
chr3 (15-113)||(41189770-41189867)
chr3 (17-98)||(9562998-9563078)
chr3 (18-113)||(26141538-26141632)
chr3 (17-99)||(24699974-24700055)
chr3 (18-113)||(14623845-14623939)
chr3 (22-113)||(30801739-30801829)
chr3 (23-113)||(26754700-26754789)
chr3 (16-113)||(11347928-11348024)
chr3 (14-87)||(35965806-35965878)
chr3 (143-201)||(11095284-11095343)
chr3 (143-201)||(33644324-33644383)
chr3 (18-113)||(51419366-51419460)
chr3 (17-87)||(8956761-8956830)
chr3 (15-113)||(11907368-11907465)
chr3 (19-113)||(13898061-13898154)
chr3 (143-200)||(53982135-53982193)
chr3 (143-201)||(48587018-48587077)
chr3 (143-201)||(52629424-52629483)
chr3 (143-201)||(54868812-54868871)
chr3 (143-200)||(31456813-31456871)
chr3 (18-84)||(45058588-45058652)
chr3 (143-200)||(49607538-49607596)
chr3 (16-113)||(35093583-35093679)
chr3 (18-113)||(20764921-20765015)
chr3 (147-187)||(33118781-33118822)
[»] chr6 (27 HSPs)
chr6 (18-113)||(32869678-32869772)
chr6 (21-113)||(22880664-22880755)
chr6 (18-113)||(17598554-17598648)
chr6 (16-113)||(6209471-6209567)
chr6 (17-113)||(11427615-11427712)
chr6 (16-98)||(15832575-15832656)
chr6 (18-113)||(29857827-29857921)
chr6 (18-105)||(31109414-31109500)
chr6 (16-113)||(23128133-23128229)
chr6 (17-113)||(31976247-31976342)
chr6 (143-201)||(11427742-11427801)
chr6 (14-109)||(15990052-15990146)
chr6 (143-201)||(17598678-17598737)
chr6 (143-201)||(29857951-29858010)
chr6 (143-201)||(32869802-32869861)
chr6 (16-113)||(31110767-31110861)
chr6 (18-84)||(31953065-31953130)
chr6 (16-109)||(30341370-30341462)
chr6 (19-95)||(946377-946452)
chr6 (18-109)||(15508034-15508124)
chr6 (143-197)||(15832701-15832756)
chr6 (143-209)||(6209375-6209441)
chr6 (143-206)||(22880570-22880634)
chr6 (22-113)||(28536494-28536582)
chr6 (39-109)||(4231568-4231638)
chr6 (143-202)||(23128042-23128103)
chr6 (143-188)||(31110691-31110737)
[»] scaffold0321 (2 HSPs)
scaffold0321 (16-113)||(10115-10211)
scaffold0321 (143-201)||(10026-10085)
[»] scaffold0237 (2 HSPs)
scaffold0237 (18-113)||(4029-4123)
scaffold0237 (143-201)||(4153-4212)
[»] scaffold1268 (1 HSPs)
scaffold1268 (18-113)||(935-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (18-113)||(935-1029)
[»] scaffold0110 (1 HSPs)
scaffold0110 (18-109)||(8873-8963)


Alignment Details
Target: chr5 (Bit Score: 509; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 201 - 826
Target Start/End: Original strand, 1425958 - 1426582
Alignment:
Q  201 taatataaagaggcacattagagacgacaatgttgtcc----tacagccatagtgaaaataaaatatcgtaatctcaaaagaaaggttagacaagacccg 296  Q
    |||||||||||||||||||||||||||||||| || ||    |||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  1425958 taatataaagaggcacattagagacgacaatgctgcccaatatacagccatagtgaaaata-----tcgtaatctcaaaagaaaggttagacaagacccg 1426052  T
Q  297 tccaacatgacatcatgcactaactcaaagacctaccctactgcattctgcaaaaagaatgactacctactcagttagcatataaacaagctactaccaa 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1426053 tccaacatgacatcatgcactaactcaaagacctaccctactgcattctgcaaaaagaatgactacctactcagttagcatataaacaagctactaccaa 1426152  T
Q  397 aagatgactggaaatacaaggcacaagtgaacagtggaattggaccggataccgaattttcnnnnnnnnnnnnnnnncactgtttatactaaaatatttg 496  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||                |||| ||||||||||||||||||    
T  1426153 aagacgactggaaatacaaggcacaagtgaacggtggaattggaccggataccgagttttcaaaacaaaaaataaaacactatttatactaaaatatttg 1426252  T
Q  497 agcaaggtgacaaattgtcagcatgaaagcctaacaaagaagtttattgcatcaaacctcgcagattccaccttgcccaatttgctgctgatcaaactca 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1426253 agcaaggtgacaaattgtcagcatgaaagcctaacaaagaagtttattgcatcaaaccccgcagattccaccttgcccaatttgctgctgatcaaactca 1426352  T
Q  597 gtagcaacagatgaatcttttgctgaaataaaagccaatttctactcctcatcaatcgcaacatcattcataaatcaagcttctaataataatgaattat 696  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1426353 gtagcagcagatgaatcttttgctgaaataaaagccaatttctactccttatcaatcgcaacatcattcataaatcaagcttctaataataatgaattat 1426452  T
Q  697 ccacaaattatgcaaaactccatttccagtaataatatcaattcgaatatttggatccttgacactagcaccacacaccatttcacttgcaccaagaata 796  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1426453 ccacaaattatgcaaaactccatttccagtaataatatcaattcgaatatttggatccttgacactagcaccacacaccatttcacttgcaccaagaata 1426552  T
Q  797 ctattacaagttttcattatattaagccta 826  Q
    ||||||||||||||||||||||||||||||    
T  1426553 ctattacaagttttcattatattaagccta 1426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 13811650 - 13811746
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13811650 aagagtaaagatacatagacaccc-ttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 18520986 - 18520890
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  18520986 aagaataatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 14831814 - 14831908
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  14831814 gagtaatgatacatagacactc-ttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 36733044 - 36732948
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  36733044 aagagtaatgatacatagacaccc-ttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

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Target: chr5; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 2740273 - 2740368
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  2740273 agagtaatgatacatagacatcc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 40145407 - 40145501
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  40145407 gagtaatgatacatagacaccc-ttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 42414402 - 42414308
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  42414402 gagtaatgatacatagacacc-agtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 33149738 - 33149644
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| |||||||  |||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||||||    
T  33149738 gagtaatgatacatagacaccc-ttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 35785199 - 35785293
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||  |||||||| ||||    
T  35785199 gagtaatgatacatagacaccc-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 35943992 - 35943898
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||  || ||||||||||    
T  35943992 gagttatgatacatagacaccc-ttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 15409713 - 15409616
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| |||||||||||||| || |||||||||||||||   ||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||    
T  15409713 taagagttatgatacatagacatcc-ttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 28177775 - 28177869
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||| |||||||| ||||    
T  28177775 gagttatgatacatagacatcc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 6679697 - 6679792
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| |||||||||||||| |  ||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||| |||||||| ||||    
T  6679697 agagttatgatacatagacatct-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 31008986 - 31009082
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| |||||||||| ||| || |||||||||||||||   ||  ||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  31008986 aagagttatgatacataaacatcc-ttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagc 110  Q
    |||||||| |||||||||||||  ||||||| ||||||| | ||| | |  || ||||||||||||||||||||||||||||| ||||||||||    
T  41470517 agagtaataatacatagacacct-ttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 2740398 - 2740457
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  2740398 ctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 2740457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 20073616 - 20073522
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||| ||||||| | ||||| |||||||||||| |||||||| |||||||||||||  |||||   ||||||||| | |||||||||||    
T  20073616 gagtaatgatatatagacatc-attagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcaca 20073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 26720516 - 26720610
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||||||||| ||| ||||| ||| ||||||||||||||| | ||| ||||  |||||||||||||    
T  26720516 gagttatgatacatagacatcc-ttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 26990265 - 26990359
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||||||||| ||| ||||| ||| ||||||||||||||| | ||| ||||  |||||||||||||    
T  26990265 gagttatgatacatagacatcc-ttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 33149614 - 33149555
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||    
T  33149614 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactct 33149555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaat 78  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||    
T  36875702 agtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 14831938 - 14831996
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  14831938 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactc 14831996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 35785323 - 35785381
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||    
T  35785323 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactc 35785381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 3921367 - 3921275
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  3921367 aagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 18520860 - 18520801
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    |||||||||| ||||||||||||||||||  |||||||| ||||||| ||||||||||||    
T  18520860 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactct 18520801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 6260101 - 6260021
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggac 99  Q
    ||||||||||||||| ||| |||| ||||||||||||||| ||| ||||||||  |||||||| |||| | ||||| |||||    
T  6260101 gagtaatgatacatacacaaccat-aggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggac 6260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 33825424 - 33825356
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    |||||||||| ||||||||  | ||||||| ||||||||   ||||||||||||||||||||||||||||    
T  33825424 gagtaatgatgcatagacattc-ttaggtggcaatacactccttgacacccacataaaaatctgacacgt 33825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 2252269 - 2252178
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    ||||| |||||||||| ||| || ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  2252269 agagttatgatacataaacatcc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  67 ccacataaaaatctgacacgtagtcacgtggactccgcacaagca 111  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 40145531 - 40145590
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    |||||||| | ||||||||||||| |||| ||||||||| ||||||| ||||||||||||    
T  40145531 ctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcattactct 40145590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 16327923 - 16327969
Alignment:
Q  41 ttaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    ||||||| ||||||| |  ||||||||||||||||||||||||||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgt 16327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 31132458 - 31132516
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    |||||||||| ||||||||||||||||||  |||||||| ||| ||| |||||||||||    
T  31132458 ctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcattactc 31132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 36732918 - 36732872
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctat 188  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||||    
T  36732918 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 4e-37; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 10249486 - 10249388
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  10249486 ataagagtaatgatacatagacaccc-ttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 32505749 - 32505654
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  32505749 agagtaatgatacatagacaccc-ttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 9058476 - 9058574
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  9058476 ataagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 13438343 - 13438437
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13438343 gagtaatgatacatagacaccc-ttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 30915461 - 30915557
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  30915461 aagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 33436202 - 33436106
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  33436202 aagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 5574589 - 5574494
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  5574589 agagtaatgatacatagacactc-ttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 28863458 - 28863549
Alignment:
Q  21 taatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28863458 taatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 28381755 - 28381661
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| || |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  28381755 gagtaatgatacatagacaccc-ttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 7465836 - 7465741
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  7465836 agagtaatgatacatagacaccc-ttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  17473020 gagtaatgatacatagacaccc-ttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 40701478 - 40701572
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||| ||||    
T  40701478 gagtaatgatacatagacaccc-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 4060685 - 4060779
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||  ||||| |||||||    
T  4060685 gagtaatgatacatagacaccc-ttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 19930917 - 19930826
Alignment:
Q  21 taatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||| ||||| |||||||||||||||||||| |||||| |||||||| ||||    
T  19930917 taatgatacatagacaccc-ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 27864704 - 27864798
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||| ||| ||||||||| ||||||| ||||| |||||||||||||||| |||||||||| ||||| |||||||    
T  27864704 gagtaatgatacatagacaccc-ttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 42257186 - 42257287
Alignment:
Q  11 aatataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagc 110  Q
    |||| |||||| |||||||||||||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  42257186 aataaaagagttatgatacatagacatct-ttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagc 42257284  T
Q  111 aca 113  Q
    |||    
T  42257285 aca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 20700813 - 20700909
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||| || ||| ||| ||||||||| |||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||    
T  20700813 aagagtaatgatacatagacatcc-ttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 38882915 - 38882834
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggac 99  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||||||| ||||| |||||||||||||||||||||||||||    
T  38882915 aagagtaatgatacatagacaccc-ttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggac 38882834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 40614002 - 40613908
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||| | ||| ||||| |||||||||||||    
T  40614002 gagttatgatacatagacatcc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 33436210 - 33436305
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| || |||| || ||||||||| |||||||||||||||||||||||||||||   || |||||||  |||||||||||    
T  33436210 agagtaatgatacatagacatcc-ttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcaca 33436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 10249358 - 10249295
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactctaata 205  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  10249358 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactccaata 10249295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 26891606 - 26891510
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| ||||||||||| ||||| ||||||| |||||||||  | |||||||||| |||||||||||| || |||||||||||  || |||||||||    
T  26891606 aagagttatgatacatagccaccc-ttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 38273244 - 38273148
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| ||||||||||||||  | |||| || ||||||||| ||| ||||||||| ||||||||||||||||| ||| ||||| |||||| ||||||    
T  38273244 aagagttatgatacatagacattc-ttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 4060809 - 4060869
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactcta 202  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  4060809 ctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcattactcta 4060869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 7465711 - 7465652
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  7465711 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 7465652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 32505623 - 32505560
Alignment:
Q  144 taatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactctaatat 206  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||| ||||||||||| |||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcattactcaaatat 32505560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||||||| |||||| |||||||||||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  43490121 gagttatgatacataaacaccc-ttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 5574476 - 5574418
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  5574476 ctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 5574418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 13438467 - 13438525
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  13438467 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactc 13438525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 17473144 - 17473202
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  17473144 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 17473202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 28863579 - 28863637
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  28863579 ctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 28863637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 30915587 - 30915645
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactc 200  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  30915587 ctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 30915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 2533123 - 2533217
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| |||||||||||||| || ||| ||| ||||||| | ||||||||| ||| ||||||||||||||||| ||| | ||| |||||||||||||    
T  2533123 agagttatgatacatagacatcc-ttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 40701602 - 40701662
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactcta 202  Q
    ||||||||| |||||||||||||||||||| |||||| | ||||||| |||||||||||||    
T  40701602 ctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactcta 40701662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| | || ||||| |||||||||  |||||||||||| |||||||||||| || || |||||||| || ||||| ||||    
T  17820104 gagttatgatacatagacaactat-aggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 19930796 - 19930737
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||| ||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  19930796 ctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattactct 19930737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||||||| |||||| ||| ||||||||||| |  |||||||||||| |||||||||||| || ||||  ||||| |||||||||    
T  38732354 gagttatgatacataaacaccc-ttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 27864815 - 27864877
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactctaat 204  Q
    ||||| |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||||    
T  27864815 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcattactctaat 27864877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 36168835 - 36168928
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagca 111  Q
    ||||| |||||||||||||| || |||| |||||||||| | ||| || |||||| |||||| |||||||| | ||| ||||| |||||||||||    
T  36168835 agagttatgatacatagacatcc-ttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 38882787 - 38882729
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||||||||| |||||||| | | ||||| |||||||||||    
T  38882787 ctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcattactc 38882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 28381624 - 28381571
Alignment:
Q  150 atggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactcta 202  Q
    ||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||    
T  28381624 atggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcta 28381571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  62 gacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||| |||||||||||| || |||| |||||| |||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 9058604 - 9058662
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||| |||||| |||||||||| | | ||| |||||||||||    
T  9058604 ctaatgcatggggtgtacaagagtgtatgggaataaagggtatttatatatcattactc 9058662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 20700943 - 20700985
Alignment:
Q  147 tgcatggggtgtacaagggtgtat-ggaataaaggatgtctat 188  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  20700943 tgcatggggtgtacaagggtgtatgggaataaagggtgtctat 20700985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 3439985 - 3440073
Alignment:
Q  24 tgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| ||||||||| ||||||| ||||||||   | |||||||||| |||||||| ||| ||  | |||||||| |||||||||||||    
T  3439985 tgatacgtagacaccc-ttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 40613877 - 40613832
Alignment:
Q  144 taatgcatggggtgtacaagggtgtat-ggaataaaggatgtctat 188  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctat 40613832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 48183158 - 48183055
Alignment:
Q  9 ataatataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaa 108  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  48183158 ataatataagagtaatgatacatagacaccc-ttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 48183060  T
Q  109 gcaca 113  Q
    |||||    
T  48183059 gcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 11511562 - 11511468
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11511562 gagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 54473633 - 54473539
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  54473633 gagtaatgatacatagacaccc-ttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 480549 - 480453
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  480549 aagagtaatgatacatagacaccc-ttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 23608232 - 23608329
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  23608232 taagagtaatgatatatagacaccc-ttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 50052530 - 50052434
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  50052530 aagagtaatgatacatagacatcc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  41236347 gagtaatgatacatagacaccc-ttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 29239884 - 29239980
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||| || ||||||||||    
T  29239884 aagagtaatgatacatagacaccc-ttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 6034044 - 6034138
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||||||  |||||||||||||    
T  6034044 gagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 24995209 - 24995113
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||| || ||||||| |||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  24995209 aagagtaatgatatatggacaccc-ttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 42044469 - 42044373
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  42044469 aagagtaatgatacatagacaccc-ttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcac 112  Q
    ||||||||||||||||||| |  ||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  50526271 gagtaatgatacatagacatct-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 29234346 - 29234251
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||| |||| || ||||||||| ||||| |||  || ||||||||||||||||||||||||||| |||||||||||||    
T  29234346 agagtaatgatacatagacaccc-ttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 3481654 - 3481748
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||  ||||||| ||||||||  ||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||    
T  3481654 gagtaatgatacatagacacct-ttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 31910192 - 31910286
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||||||||||||  ||||||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||    
T  31910192 gagttatgatacatagacatcc-ttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 48647829 - 48647732
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| |||| ||||| ||| || |||||| ||||||||||  || |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  48647829 taagagttatgacacataaacatcc-ttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 48183024 - 48182955
Alignment:
Q  144 taatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc-taatataaaga 211  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||    
T  48183024 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactcataatataaaga 48182955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 29977876 - 29977979
Alignment:
Q  9 ataatataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaa 108  Q
    |||| ||||||||||||||||||| | | |||| ||||| |||||||||  || ||||||||| ||||||||||||||||||||  ||||| || |||||    
T  29977876 ataaaataagagtaatgatacatacagaaccat-aggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaa 29977974  T
Q  109 gcaca 113  Q
    |||||    
T  29977975 gcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 41236471 - 41236531
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactcta 202  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  41236471 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcta 41236531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 24995082 - 24995019
Alignment:
Q  144 taatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactctaatat 206  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||    
T  24995082 taatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcattactctaatat 24995019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 42044343 - 42044284
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  42044343 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactct 42044284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 55475182 - 55475256
Alignment:
Q  9 ataatataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    |||| |||||||| |||||||||| ||| || ||||||| ||||||||| ||||||||||||| ||||||||||||    
T  55475182 ataacataagagttatgatacataaacatcc-ttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 6034168 - 6034226
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||    
T  6034168 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactc 6034226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 41823926 - 41823976
Alignment:
Q  63 acacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 23608359 - 23608423
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactctaatat 206  Q
    |||||||||| |||||||| || ||||||| |||||||||||||||| |||||||||||| ||||    
T  23608359 ctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactcttatat 23608423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacg 86  Q
    |||| |||||||||||||| || |||||||  |||||||| ||||||||||||| ||||||||||||||    
T  40574779 gagttatgatacatagacatcc-ttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 53352660 - 53352574
Alignment:
Q  23 atgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagca 111  Q
    ||||||||||||||||| ||||||| |||||||   ||| ||||| ||| |||||||||||||||||| | |||||| |||||||||||    
T  53352660 atgatacatagacaccc-ttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 11511437 - 11511377
Alignment:
Q  144 taatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactctaat 204  Q
    ||||||||| ||||||||||||||||||| |||||| | ||||||| |||||||||||||||    
T  11511437 taatgcatgaggtgtacaagggtgtatggaaataaatg-tgtctatgtatcattactctaat 11511377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 19670818 - 19670726
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| ||||||| |||||||||  ||||||| |||| |||||||||||| || | ||  ||||| |||||||||    
T  19670818 aagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 28480369 - 28480274
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| || ||||||||||| || ||||||||||||||||   || |||| |||| |||||||||||| ||||||| |||||| || ||||| ||||    
T  28480369 agagttataatacatagacaacc-ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 28481244 - 28481149
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| || ||||||||||| || ||||||||||||||||   || |||| |||| |||||||||||| ||||||| |||||| || ||||| ||||    
T  28481244 agagttataatacatagacaacc-ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 28482119 - 28482024
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| || ||||||||||| || ||||||||||||||||   || |||| |||| |||||||||||| ||||||| |||||| || ||||| ||||    
T  28482119 agagttataatacatagacaacc-ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    |||| |||||||||| ||| || ||||||| ||||||| | ||||||||| ||||||||||||||||    
T  8343263 gagttatgatacataaacatcc-ttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 47104539 - 47104612
Alignment:
Q  13 tataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    |||||||||||||||| |||||||  | |||| |||||||||||  | ||||||||||| |||||| ||||||||    
T  47104539 tataagagtaatgatatatagacattc-ttagatgacaatacactctctgacacccacacaaaaatttgacacgt 47104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    |||| |||||||||| |||||| ||||||| |||||||||  |||||||||| | ||||||||||||    
T  55079814 gagttatgatacataaacaccc-ttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 29548062 - 29547994
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    ||||||| |||||||||| ||| || ||||||| ||||||| |  |||||||||||| ||||||||||||    
T  29548062 taagagttatgatacataaacatcc-ttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 1e-34; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 12831047 - 12831141
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12831047 gagtaatgatacatagacaccc-ttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 14547918 - 14548016
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  14547918 ataagagtaaagatacatagacaccc-ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 504221 - 504127
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  504221 gagtaatgatacatagacaccc-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 15197333 - 15197427
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| | ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  15197333 gagtaatgatacatagacactc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| |||||||  |||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  1180040 gagtaatgatacatagacaccc-ttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 23122697 - 23122603
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  23122697 gagtaatgatacatagacaccc-ttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 10284733 - 10284637
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| ||||||||||||||||| ||| ||||||||||||  ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  10284733 aagagttatgatacatagacaccc-ttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 37038478 - 37038573
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| |  ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  37038478 agagtaatgatacatagacatct-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 34012396 - 34012302
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| |||||||  |||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||||||    
T  34012396 gagtaatgatacatagacaccc-ttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 40424043 - 40423949
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||| |||| ||||||| ||||||||| ||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||    
T  40424043 gagtaatgatacatagataccc-ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 5957831 - 5957924
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| ||||    
T  5957831 agtaatgatacatagacattc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 44507188 - 44507095
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagca 111  Q
    ||||||||||||||||||||||| |||||||  |||||||  ||| ||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  44507188 agagtaatgatacatagacaccc-ttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 8841510 - 8841438
Alignment:
Q  41 ttaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| || |||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 15048281 - 15048188
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||||||||| ||||||||| ||| ||||||||||||||||| ||| ||||| |||||||||||||    
T  15048281 gagttatgatacatagacatcc-ttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 1179916 - 1179853
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactctaata 205  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||| ||||    
T  1179916 ctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcattactcaaata 1179853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 504097 - 504039
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  504097 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 4854966 - 4854869
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| || ||||||| ||||||||| ||| ||||| |||||||||||||| | || | ||| ||||| | |||||||||||    
T  4854966 taagagtaatgatacatagacatcc-ttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcaca 4854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 10621182 - 10621093
Alignment:
Q  23 atgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||| || |||||||  |||||||| ||||||||||||| ||||||||||||||||| ||| | ||  |||||||||||||    
T  10621182 atgatacatagacatcc-ttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 23122573 - 23122515
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  23122573 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 23122515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    ||||||||||||||||||| || ||||||| ||||||||  |||||||||||||||||||| ||||||||    
T  20075034 gagtaatgatacatagacatcc-ttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 14548046 - 14548105
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||    
T  14548046 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 14548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 34012272 - 34012213
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||||    
T  34012272 ctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactct 34012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 43414681 - 43414587
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || |||| || ||| ||||| ||||||||||||| |||||||| |||||| ||||| ||||  |||||||||||||    
T  43414681 gagttatgatacatagacatcc-ttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 9122309 - 9122367
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||    
T  9122309 ctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcattactc 9122367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 12831171 - 12831229
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||    
T  12831171 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcattactc 12831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    |||| |||||||||| |||||| ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  30479574 gagttatgatacataaacaccc-ttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 14055692 - 14055612
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggac 99  Q
    |||| ||||||||| ||||||| ||||||||||||||||   |||||| ||||| |||||||| ||| ||||||||||||||    
T  14055692 gagttatgatacattgacaccc-ttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggac 14055612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 16383375 - 16383467
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  16383375 aagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    |||||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| ||||||||||||    
T  34307214 aagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 17443824 - 17443914
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaa 108  Q
    ||||| |||||||||||||| || ||||||||||||||||   || |||| |||| |||||||||||| ||||||| |||||| || |||||    
T  17443824 agagttatgatacatagacaacc-ttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 42710270 - 42710211
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||| | ||||||||||||    
T  42710270 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcattactct 42710211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 9122229 - 9122279
Alignment:
Q  63 acacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||| |||||||||||| |||||||||||||  |||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 15259032 - 15258935
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| |||||||||||| || | |||| || ||||||| |  | |||| |||||||||||||||||| || ||||||||||| | |||||||||||    
T  15259032 taagagttatgatacatagatactc-ttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 44507063 - 44507006
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  44507063 ctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcattactc 44507006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 42221513 - 42221609
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||| ||| || |||||||||||||||    | |||||||||| |||||||||||||||| |||  ||||| ||  |||||||||    
T  42221513 aagagtaatgatacatatacatcc-ttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 24307896 - 24307830
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctga 82  Q
    ||||||| |||||||||| |||||| ||||||| ||||||| |  |||||||||||| ||||||||||    
T  24307896 taagagttatgatacataaacaccc-ttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctga 82  Q
    |||||| |||||||||| |||||| ||||||| ||||||| |  |||||||||||| ||||||||||    
T  24307627 aagagttatgatacataaacaccc-ttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 43414557 - 43414511
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctat 188  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||    
T  43414557 ctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctat 43414511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 16056503 - 16056411
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| ||| || ||| ||||||||||| |  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  16056503 aagagttatgatacataaacatcc-ttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 2e-33; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 8080485 - 8080389
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  8080485 aagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 38267040 - 38267134
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  38267040 gagtaatgatacatagacaccc-ttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 7389386 - 7389483
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  7389386 taagagtaatgatacatagacaccc-ttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 19436289 - 19436193
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  19436289 aagagtaatgatacatagacatcc-ttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 36362014 - 36361919
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  36362014 agagtaatgatacatagacaccc-ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 19329842 - 19329936
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  19329842 gagtaatgatacatagacatcc-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 38837215 - 38837311
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||  ||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  38837215 aagagtaatgatacatagacaccc-ttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 3434561 - 3434656
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||    
T  3434561 agagtaatgatacatagacatcc-ttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 3783998 - 3784089
Alignment:
Q  21 taatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  3783998 taatgatacatagacaccc-ttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 36362025 - 36362120
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||| |||||||  |||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  36362025 agagtaatgatacatagacaccc-ttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 4999614 - 4999520
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||||||| ||||    
T  4999614 gagtaatgatacatagacaccc-ttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 35137533 - 35137627
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||| ||||    
T  35137533 gagtaatgataaatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 40957705 - 40957801
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| | ||||||| ||||||||  ||||| ||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  40957705 aagagtaatgatacatagacactc-ttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 3694370 - 3694461
Alignment:
Q  21 taatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||| ||| |||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |||||  |||||||||||||    
T  3694370 taatgatatatacacaccc-ttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 32951592 - 32951499
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| | |||| |||||||||| | ||| ||| ||||| |||||||| |||||||||||||||||| |||||||||||||    
T  32951592 agtaatgatacatagacactc-ttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 8238212 - 8238303
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||||||| ||||||  |||||| ||||||||| ||||||||||||| |||||||||||| |||||||  ||||| |||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 21234401 - 21234495
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||||| |||| |||||| |||||||||| ||| || || |||||||||||||    
T  21234401 gagttatgatacatagacatcc-ttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 46033879 - 46033809
Alignment:
Q  41 ttaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagca 111  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  46033879 ttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 19329966 - 19330025
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  19329966 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 19330025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||| ||||| ||| ||||||||| ||||||||||||||| | ||| ||||| |||||||||||||    
T  46374902 gagttatgatacatagacatcc-ttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 4999490 - 4999430
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactcta 202  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||    
T  4999490 ctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactcta 4999430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 8080355 - 8080299
Alignment:
Q  147 tgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactcta 202  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  8080355 tgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcta 8080299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35468957 - 35468894
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatct 80  Q
    ||||||||||||||||||||| || |||| || ||||||| ||||||||||||||||||||||||    
T  35468957 aagagtaatgatacatagacatcc-ttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 36208169 - 36208267
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||| ||||||||||||||||| |||||||  ||||||    |||||||||||| ||||| |||||| || ||||||||||| | |||||||||||    
T  36208169 ataagagttatgatacatagacaccc-ttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 38837341 - 38837400
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  38837341 ctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactct 38837400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 39256023 - 39255934
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||||||||||| || ||||||| |||||||||| |||| ||||| | ||||||||||||||| | |||||||||||| ||||||    
T  39256023 gagttatgatacatagacaacc-ttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaag 39255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 40957831 - 40957898
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactctaatataaa 209  Q
    |||||||||||||||||||||||||||||  ||||| || ||||||| |||||||||||| |||||||    
T  40957831 ctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcattactcttatataaa 40957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 3434676 - 3434734
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  3434676 ctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcattactc 3434734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 35522881 - 35522970
Alignment:
Q  23 atgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||| || ||| ||| ||||||||||||| ||||||||| ||||||||||||||| | ||  ||||  |||||||||||||    
T  35522881 atgatacatagacatcc-ttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacac 85  Q
    |||||||||||||||||||||||| |||||||  |||||||   |||||||||||| |||||||||||||    
T  10343665 aagagtaatgatacatagacaccc-ttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 26296643 - 26296735
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagc 110  Q
    ||||| |||||||||||||| || ||||||||||||| ||| ||| ||| |||||||||||||||| |||| | ||  ||||| ||||||||||    
T  26296643 agagttatgatacatagacatcc-ttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagc 26296735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 38044195 - 38044287
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| ||||||| |||||||||  |||||| ||||| |||||||||||| |||| ||  ||||| |||||||||    
T  38044195 aagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 32951469 - 32951409
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactcta 202  Q
    ||||| ||||||||||||||||||||||| |||||| || ||||||| |||||||||||||    
T  32951469 ctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattactcta 32951409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 7389513 - 7389571
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  7389513 ctaatacatggggtgtaca-gggtgtatgggaataaaggatgtctatgtatcattactct 7389571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 22343360 - 22343426
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    ||||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| ||||||||||||    
T  22343360 agagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 36362138 - 36362197
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    ||||| |||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  36362138 ctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 36362197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 11044186 - 11044268
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||||||          ||||||||||||||||||||| |||||||||    
T  11044186 aagagtaatgatacatagacaccc-ttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaag 11044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 7727904 - 7727996
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| |||||||  ||||||||  ||||||  ||||||||||||||||| || ||||  ||||| |||||||||    
T  7727904 aagagttatgatacataaacaccc-ttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 18207178 - 18207273
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| |||||||||||||| || ||||||| |||||||||  |||||||||| | |||||||| |||||| | |||||| || || ||||||||||    
T  18207178 aagagttatgatacatagacaacc-ttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcaca 18207273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 36361901 - 36361841
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactcta 202  Q
    ||||| |||||  |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  36361901 ctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcattactcta 36361841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 41915740 - 41915831
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    ||||| |||||||||| |||||| ||||||| |||||||||  |||||||| ||| |||||||||||| || | ||  ||||| |||||||||    
T  41915740 agagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 40957895 - 40957864
Alignment:
Q  12 atataagagtaatgatacatagacacccatta 43  Q
    ||||||||||||||||||||||||||||||||    
T  40957895 atataagagtaatgatacatagacacccatta 40957864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 19436163 - 19436117
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctat 188  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||    
T  19436163 ctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctat 19436117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 2581913 - 2582009
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  2581913 aagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 48716382 - 48716288
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  48716382 gagtaatgatacatagacaccc-ttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 9474976 - 9474882
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  9474976 gagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 8346490 - 8346394
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  8346490 aagagtaatgatacatagtcacct-ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 38632423 - 38632327
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  38632423 aagagtaatgatacatagacaccc-ttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||  | ||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43132 gagtaatgatacatagacagtc-ttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 3000319 - 3000413
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  3000319 gagtaatgatacataaacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 27564835 - 27564741
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  27564835 gagtaatgatacatagacatcc-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 38595152 - 38595248
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||| |||||  ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  38595152 aagagtaatgatacataaacacct-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 44548473 - 44548382
Alignment:
Q  21 taatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||| |  ||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  44548473 taatgatacatagacatct-ttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 51898784 - 51898689
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||| |  ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  51898784 agagtaatgatacatagacatct-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 47452420 - 47452326
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| |||||||  |||||||| ||||||||||||| |||||||| |||||||||||||||||  |||||||||||||    
T  47452420 gagtaatgatacatagacaccc-ttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 49811632 - 49811533
Alignment:
Q  13 tataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcac 112  Q
    ||||||||| |||||| ||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  | ||||||||||||||||    
T  49811632 tataagagttatgatagatagacatcc-ttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcac 49811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 50630457 - 50630552
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||| |||| ||||||| ||||||| | ||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  50630457 agagtaatgatacatagataccc-ttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 32813245 - 32813341
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| |||||||||||||| || ||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  32813245 aagagttatgatacatagacatcc-ttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 41758804 - 41758899
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||  || ||||||||| ||||||| ||||| ||||||||||||||||||||| ||||| |||||||| ||||    
T  41758804 agagtaatgatacatagacacc-attaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 37649198 - 37649292
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| |  ||||||| ||||||||  ||||||||||||| ||||||||||||||| |||||||| | ||||||||||||||    
T  37649198 gagtaatgatacatagacatct-ttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 13414787 - 13414855
Alignment:
Q  45 gtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||||||||||| || ||||||||||    
T  13414787 gtgacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 26274428 - 26274511
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtgga 98  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| ||||||||| ||||| ||||||||||||| ||||||||||||    
T  26274428 ataagaataatgatacatagacaccc-ttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtgga 26274511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcac 112  Q
    |||||||| |||||||||||  ||||||| ||||||||| || |||| ||||| |||||||||||||||||||| || ||| ||||||||||||    
T  11152476 agtaatgaaacatagacacc--ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 27564711 - 27564651
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactcta 202  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  27564711 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcta 27564651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 23597193 - 23597123
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    ||||||||||||||||||||| | |||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  23597193 aagagtaatgatacatagacatc-attaggtggcaatacactctttgatacccacataaaaatctgacacgt 23597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 41758929 - 41758987
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  41758929 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 41758987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 48716258 - 48716200
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  48716258 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 48716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 37649322 - 37649379
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattact 199  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  37649322 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 37649379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 45044638 - 45044566
Alignment:
Q  41 ttaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| ||||||||||||||||||||| | |||||||||||| |||| ||| ||||| |||||||| ||||    
T  45044638 ttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 5959102 - 5959010
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| ||| ||| |||||||||  |||||||||||| |||||||||||| || ||||  ||||| |||||||||    
T  5959102 aagagttatgatacataaacaccc-ttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 38595285 - 38595338
Alignment:
Q  150 atggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactcta 202  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  38595285 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactcta 38595338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 3000450 - 3000501
Alignment:
Q  150 atggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  3000450 atggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 3000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 9474852 - 9474793
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    |||||||||||| |||||||||||||||| ||||||||  ||||||| ||||||||||||    
T  9474852 ctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcattactct 9474793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 50591100 - 50591010
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  50591100 gagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 26274553 - 26274614
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactctaa 203  Q
    |||||||||| | || |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  26274553 ctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcattactctaa 26274614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 43256 - 43316
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactcta 202  Q
    ||||||||||||||||||||| ||||||  ||||||||| | ||||| |||||||||||||    
T  43256 ctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcattactcta 43316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 26440756 - 26440828
Alignment:
Q  41 ttaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||| ||| ||||||||| ||||||||||||||| | ||| ||||  ||||| |||||||    
T  26440756 ttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 38632297 - 38632253
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtct 186  Q
    |||||||||||||||||||||||||||| |||||||||| |||||    
T  38632297 ctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 6260914 - 6260964
Alignment:
Q  63 acacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||| ||| || ||||||||||| ||||| |||||||    
T  6260914 acacccacataaaaatctaacatgtggtcacgtggaccccgcataagcaca 6260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 37926516 - 37926470
Alignment:
Q  41 ttaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    ||||||| ||||||| | ||| |||||||||||||||||||||||||    
T  37926516 ttaggtggcaatacatcttttaacacccacataaaaatctgacacgt 37926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 47452292 - 47452238
Alignment:
Q  147 tgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||| ||||| |||||||||  ||||||| |||||||||||    
T  47452292 tgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcattactc 47452238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 45044536 - 45044491
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtcta 187  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||    
T  45044536 ctaatgtatggggtgtacaagggtgtatgagaataaatgatgtcta 45044491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 53982006 - 53982105
Alignment:
Q  13 tataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcac 112  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  53982006 tatatgagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 53982104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 33644200 - 33644294
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| || |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  33644200 gagtaatgatacatagacaccc-ttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 54868998 - 54868901
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||| ||||    
T  54868998 taagagtaatgatacatagacaccc-ttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 49607412 - 49607508
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||  || ||||||||||    
T  49607412 aagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 31456690 - 31456783
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  31456690 agtaatgatacatagacacccat-aggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 52629305 - 52629394
Alignment:
Q  23 atgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  52629305 atgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 27714993 - 27714897
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||  |||||||  |||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  27714993 aagagtaatgatacatagacacct-ttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11095456 - 11095377
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgt 95  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  11095456 taagagtaatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 17470404 - 17470499
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||||||  ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  17470404 agagtaatgatacatagacacct-ttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 8076393 - 8076487
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||| |||||| ||||||| || |||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  8076393 gagtaatgatacataaacaccc-ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 33118954 - 33118872
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtgga 98  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  33118954 taagagttatgatacatagacaccc-ttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 48587187 - 48587101
Alignment:
Q  22 aatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    ||||||||||||| |||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  48587187 aatgatacatagataccc-ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 36707526 - 36707445
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtgga 98  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||    
T  36707526 aagagtaatgatacatagataccc-ttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtgga 36707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 35536625 - 35536706
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggac 99  Q
    |||||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||    
T  35536625 agagtaatgatacatagacatcc-ttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggac 35536706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 41189867 - 41189770
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| |||||||||| ||| || ||||||| ||||||| |||||||||||||||||||||| |||||||| | ||| ||||| |||||||||||||    
T  41189867 taagagttatgatacatatacatcc-ttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 9562998 - 9563078
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtgga 98  Q
    |||||||||||||||| ||||| ||||| |||||||||| | ||||||| ||| ||||||||||||||||||||||||||||    
T  9562998 agagtaatgatacataaacacc-attagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtgga 9563078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 26141632 - 26141538
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || ||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||| ||||| || ||||||||||    
T  26141632 gagttatgatacatagacatcc-ttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 24700055 - 24699974
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggac 99  Q
    |||||||||||||||||||| || |||| || ||||||||| ||||||||||||||||||||||| ||||| | |||||||||    
T  24700055 agagtaatgatacatagacatcc-ttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggac 24699974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 14623939 - 14623845
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| || ||||||| |||||||||  ||||||||||||||||||||||||| ||  ||| ||||||  | ||||||||||    
T  14623939 gagtaatgatacatagacatcc-ttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcaca 14623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 30801829 - 30801739
Alignment:
Q  22 aatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||| |||||||| |||||||| ||||| ||||||| |||||| ||||| |||||||  ||||| || ||||||||||    
T  30801829 aatgatacatagacaccc-ttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 26754700 - 26754789
Alignment:
Q  23 atgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| ||||||||||| ||||||| ||||||||| || |||| ||||| |||||||||||| || ||||| ||||| |||||||||||||    
T  26754700 atgattcatagacaccc-ttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 11348024 - 11347928
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| |||||||||||||| || ||||||||||||||| | ||||||| ||||| ||||||||||||||| | ||| ||||| | ||| |||||||    
T  11348024 aagagttatgatacatagacatcc-ttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 35965878 - 35965806
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    ||||||||||||||||||| ||| || ||| |||| |||||| | |||||||||||||||||||||||||||||    
T  35965878 ataagagtaatgatacatatacatcc-ttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 11095343 - 11095284
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  11095343 ctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 11095284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 33644324 - 33644383
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||    
T  33644324 ctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcattactct 33644383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 51419460 - 51419366
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||||||||| || |||| |||||||||| | ||| ||||||||| ||||||||||||||| | ||| | ||| |||||||||||||    
T  51419460 gagttatgatacatagacatcc-ttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 8956761 - 8956830
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgt 87  Q
    |||||||||||||||||||| || ||| ||| ||||||| | |||||||||||||||||||| ||||||||    
T  8956761 agagtaatgatacatagacatcc-ttatgtggcaatacatcctttgacacccacataaaaatgtgacacgt 8956830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 11907368 - 11907465
Alignment:
Q  15 taagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||| ||||||||||||||||| ||||||||||||||||   |  |||| |||| |||||||||||| || ||||  ||||| |||||||||||||    
T  11907368 taagagttatgatacatagacaccc-ttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 13898154 - 13898061
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||| ||| ||| || ||||||| |||||||||  ||||||||||||||||||||||||||||  ||| ||||||  | ||||||||||    
T  13898154 agtaatgatagataaacatcc-ttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 53982135 - 53982193
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  53982135 ctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcattactc 53982193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 48587077 - 48587018
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    |||||||||||| ||||||||||| ||||| |||||||| ||||||| ||||||||||||    
T  48587077 ctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcattactct 48587018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 52629424 - 52629483
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||| ||||||||||||    
T  52629424 ctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcattactct 52629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 54868871 - 54868812
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    ||||||||| |||||||||||||||||||| |||||| | ||||||| ||||||||||||    
T  54868871 ctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 54868812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 31456813 - 31456871
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    ||||||||||||||||||||||||| || |||||||||| ||| ||| |||||||||||    
T  31456813 ctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcattactc 31456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 45058652 - 45058588
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    |||| |||||||||| |||||| ||||||| ||||||||| || |||||||||||||||||||||||    
T  45058652 gagttatgatacataaacaccc-ttaggtggcaatacaccctt-gacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 49607538 - 49607596
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactc 200  Q
    ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  49607538 ctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 49607596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 35093583 - 35093679
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| | |||||||||||| |  ||||||||||||||| ||||||||| ||||  |||||||||||| || |||| ||| |||||  |||||||||    
T  35093583 aagagttacgatacatagacaact-ttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcaca 35093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 20765015 - 20764921
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||| ||||||||| || |||||||  |||||||  ||| ||||||||| ||||||||||||||| | ||| ||||| ||| |||||||||    
T  20765015 gagttatgagacatagacatcc-ttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 33118822 - 33118781
Alignment:
Q  147 tgcatggggtgtacaagggtgtatgg-aataaaggatgtcta 187  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  33118822 tgcatggggtgtacaagggtgtatggaaataaagggtgtcta 33118781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 6e-30; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 32869678 - 32869772
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  32869678 gagtaaagatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 22880755 - 22880664
Alignment:
Q  21 taatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  22880755 taatgatacatagacaccc-ttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 17598554 - 17598648
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  17598554 gagtaatgatacatagacaccc-ttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 6209567 - 6209471
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||| ||||||||| ||||||||||||||||| |||||| ||||||    
T  6209567 aagagtaatgatacatagacaccc-ttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 11427615 - 11427712
Alignment:
Q  17 agagtaatgatacatagacaccca-ttaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||||  ||||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 15832575 - 15832656
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtgga 98  Q
    |||||||||||||||||||||||  ||||||||||||| | ||||||||||||||| |||||| |||||||||||||||||||    
T  15832575 aagagtaatgatacatagacacct-ttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtgga 15832656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 29857827 - 29857921
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||  |||| || ||||||||| ||| ||||||||| |||||||||||||||||| |||||||  ||||| |||||||    
T  29857827 gagtaatgatacatagacacct-ttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 31109500 - 31109414
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgca 105  Q
    ||||||||||  |||||||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||| ||| |||||    
T  31109500 gagtaatgattaatagacaccc-ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 23128229 - 23128133
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||| |||||||| |||||||||  ||| |||| |||||| | ||||||||||||| ||||||||||||||||||||||||||  || ||||||||||    
T  23128229 aagaataatgatatatagacacct-ttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 31976247 - 31976342
Alignment:
Q  17 agagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||| |||||||||||||| || ||||||| ||||| ||| ||| ||||||||| ||||||||||||||| ||||| || || |||||||||||||    
T  31976247 agagttatgatacatagacatcc-ttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 11427742 - 11427801
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatg-gaataaaggatgtctatctatcattactct 201  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  11427742 ctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 11427801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 15990146 - 15990052
Alignment:
Q  14 ataagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  15990146 ataagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 17598678 - 17598737
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||    
T  17598678 ctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 17598737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 29857951 - 29858010
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  29857951 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactct 29858010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 32869802 - 32869861
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||    
T  32869802 ctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 32869861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 31110861 - 31110767
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||||| ||||  |||||||||||||||  ||| ||||| | |||||||||||    
T  31110861 aagagttatgatacatagacatcc-ttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 31953130 - 31953065
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgaca 84  Q
    ||||||||||| ||||||| || ||||||| |||||||||  |||||||||||||||||||||||||    
T  31953130 gagtaatgatagatagacatcc-ttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 30341462 - 30341370
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  30341462 aagagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 946377 - 946452
Alignment:
Q  19 agtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgt 95  Q
    ||||| |||||||||||| || |||||||| |||||||| ||||||||| ||  ||||||||||||| |||||||||    
T  946377 agtaacgatacatagacatcc-ttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgt 946452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 15508124 - 15508034
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||||| || | ||  ||||| |||||||||    
T  15508124 gagttatgatacataaacaccc-ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 15832701 - 15832756
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgta-tggaataaaggatgtctatctatcatta 197  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||  ||||||||    
T  15832701 ctaatgcatggggtgtacaagggtgtattggaataaagggtgtctacgtatcatta 15832756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 6209441 - 6209375
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatggaataaaggatgtctatctatcattactctaatataaa 209  Q
    |||||||||||| ||||||| | |||| |||||||||| | ||||| ||||||||||||||| ||||    
T  6209441 ctaatgcatgggatgtacaaagatgtagggaataaagggtatctatgtatcattactctaatttaaa 6209375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 22880634 - 22880570
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactctaatat 206  Q
    ||||| |||||||||||||||||||||| |||||||| | ||| ||| |||||||||||| ||||    
T  22880634 ctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcattactcttatat 22880570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 28536582 - 28536494
Alignment:
Q  22 aatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||| ||| || ||||||| ||||||| |  |||||||||||| ||||||||||||||  |||| |||||| || ||||||||||    
T  28536582 aatgatacataaacatcc-ttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 4231568 - 4231638
Alignment:
Q  39 cattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    ||||||||| |||||||||  ||| |||||||| ||||||||||||||| | ||  ||||| |||||||||    
T  4231568 cattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 23128103 - 23128042
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatggaa--taaaggatgtctatctatcattactcta 202  Q
    |||||||||||| |||||||||||||||||||   ||||| | ||||| |||||||||||||    
T  23128103 ctaatgcatgggatgtacaagggtgtatggaaataaaaggttctctatgtatcattactcta 23128042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 31110737 - 31110691
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctat 188  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  31110737 ctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctat 31110691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 10211 - 10115
Alignment:
Q  16 aagagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||| ||||||||||||||||  ||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||  || |||||||||    
T  10211 aagagttatgatacatagacacct-ttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 10085 - 10026
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtatgg-aataaaggatgtctatctatcattactct 201  Q
    ||||||||| |||||||||||||||||||| ||||| || ||||||| ||||||||||||    
T  10085 ctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcattactct 10026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 4029 - 4123
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    |||||||||||||||||||||  |||| || ||||||||| ||| ||||||||| |||||||||||||||||| |||||||  ||||| |||||||    
T  4029 gagtaatgatacatagacacct-ttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 4153 - 4212
Alignment:
Q  143 ctaatgcatggggtgtacaagggtgtat-ggaataaaggatgtctatctatcattactct 201  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  4153 ctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactct 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| |  ||||||| ||||||||| ||| ||| ||||| ||||| |||||||||||||||||| |  |||||||||||||    
T  1029 gagtaatgatacatagacatct-ttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaagcaca 113  Q
    ||||||||||||||||||| |  ||||||| ||||||||| ||| ||| ||||| ||||| |||||||||||||||||| |  |||||||||||||    
T  1029 gagtaatgatacatagacatct-ttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 8963 - 8873
Alignment:
Q  18 gagtaatgatacatagacacccattaggtgacaatacaccatttgacacccacataaaaatctgacacgtagtcacgtggactccgcacaag 109  Q
    |||| |||||| ||||||| || ||| |||||||||||| |||||||| | ||| |||||| |||||| ||||||||||||| || ||||||    
T  8963 gagttatgatatatagacatcc-ttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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