View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4603_high_9 (Length: 349)

Name: NF4603_high_9
Description: NF4603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4603_high_9
NF4603_high_9
[»] chr8 (43 HSPs)
chr8 (13-333)||(41486965-41487284)
chr8 (13-100)||(37813159-37813246)
chr8 (21-105)||(17070899-17070982)
chr8 (21-105)||(17577290-17577373)
chr8 (13-98)||(20853377-20853460)
chr8 (13-98)||(16982625-16982710)
chr8 (14-94)||(25896993-25897073)
chr8 (13-89)||(33298567-33298639)
chr8 (16-105)||(35213023-35213109)
chr8 (11-89)||(22192310-22192387)
chr8 (22-98)||(26824071-26824146)
chr8 (13-87)||(14880565-14880638)
chr8 (16-98)||(41602844-41602926)
chr8 (20-97)||(9762437-9762513)
chr8 (13-98)||(28349538-28349622)
chr8 (22-94)||(27545595-27545666)
chr8 (13-97)||(45177201-45177285)
chr8 (13-100)||(23475621-23475708)
chr8 (16-98)||(23702122-23702207)
chr8 (40-99)||(37263356-37263415)
chr8 (17-99)||(521677-521758)
chr8 (24-98)||(6807172-6807245)
chr8 (13-70)||(29791230-29791288)
chr8 (21-87)||(45456976-45457040)
chr8 (13-98)||(30539221-30539305)
chr8 (13-69)||(45163690-45163746)
chr8 (13-88)||(17512106-17512181)
chr8 (22-97)||(20228231-20228305)
chr8 (13-97)||(6807399-6807480)
chr8 (13-94)||(25144173-25144251)
chr8 (13-95)||(26823828-26823910)
chr8 (36-94)||(29657951-29658009)
chr8 (18-70)||(32768487-32768536)
chr8 (13-99)||(35795561-35795647)
chr8 (44-98)||(39889771-39889825)
chr8 (15-72)||(3676144-3676200)
chr8 (13-94)||(41487440-41487520)
chr8 (21-62)||(45515968-45516008)
chr8 (13-98)||(45522421-45522506)
chr8 (40-100)||(755900-755960)
chr8 (13-94)||(7010926-7011009)
chr8 (19-95)||(18092913-18092988)
chr8 (23-99)||(23702375-23702450)
[»] chr1 (37 HSPs)
chr1 (13-99)||(39642198-39642284)
chr1 (13-100)||(3377498-3377585)
chr1 (17-98)||(25085398-25085478)
chr1 (16-95)||(23891662-23891740)
chr1 (16-94)||(16874511-16874589)
chr1 (13-97)||(14979031-14979114)
chr1 (16-99)||(17760923-17761007)
chr1 (13-101)||(46573057-46573145)
chr1 (13-100)||(17760679-17760768)
chr1 (13-87)||(50226402-50226476)
chr1 (13-98)||(23220792-23220876)
chr1 (13-97)||(3377742-3377825)
chr1 (50-98)||(25486479-25486527)
chr1 (16-86)||(27864185-27864252)
chr1 (13-96)||(5287805-5287887)
chr1 (49-95)||(18632605-18632651)
chr1 (16-98)||(41915755-41915837)
chr1 (13-99)||(46895770-46895856)
chr1 (13-69)||(1853474-1853528)
chr1 (39-96)||(42924329-42924386)
chr1 (21-97)||(32295191-32295267)
chr1 (13-89)||(48441073-48441149)
chr1 (49-100)||(46912187-46912238)
chr1 (13-63)||(3612138-3612188)
chr1 (16-94)||(6569530-6569607)
chr1 (22-96)||(37008218-37008292)
chr1 (16-98)||(45738935-45739016)
chr1 (13-99)||(3612416-3612504)
chr1 (13-98)||(12960845-12960929)
chr1 (16-96)||(16874736-16874816)
chr1 (36-77)||(51251378-51251419)
chr1 (40-100)||(12074953-12075013)
chr1 (13-97)||(14978797-14978880)
chr1 (16-88)||(40876978-40877050)
chr1 (18-94)||(41997643-41997718)
chr1 (36-72)||(45739186-45739222)
chr1 (13-97)||(46895437-46895521)
[»] scaffold0062 (1 HSPs)
scaffold0062 (13-105)||(46068-46160)
[»] chr7 (49 HSPs)
chr7 (13-107)||(20185147-20185239)
chr7 (13-100)||(28350113-28350200)
chr7 (13-100)||(4049952-4050038)
chr7 (16-107)||(14247284-14247374)
chr7 (13-99)||(15348187-15348274)
chr7 (13-99)||(28785754-28785841)
chr7 (13-97)||(20505241-20505323)
chr7 (13-96)||(5172754-5172838)
chr7 (13-97)||(36580274-36580357)
chr7 (19-98)||(11373846-11373925)
chr7 (13-94)||(9500131-9500213)
chr7 (13-94)||(6792026-6792107)
chr7 (15-95)||(8074106-8074187)
chr7 (13-62)||(15029096-15029145)
chr7 (20-100)||(18504478-18504556)
chr7 (8-89)||(21505842-21505923)
chr7 (20-100)||(17876395-17876474)
chr7 (51-97)||(21748082-21748128)
chr7 (36-98)||(21939327-21939389)
chr7 (23-98)||(23826260-23826337)
chr7 (21-99)||(46266491-46266569)
chr7 (13-95)||(47909696-47909777)
chr7 (16-77)||(28350376-28350436)
chr7 (24-107)||(3382062-3382144)
chr7 (16-99)||(21505613-21505696)
chr7 (20-63)||(40872200-40872243)
chr7 (16-98)||(41243643-41243724)
chr7 (40-98)||(45697486-45697544)
chr7 (13-84)||(3247404-3247472)
chr7 (20-77)||(24432978-24433034)
chr7 (17-97)||(41243877-41243958)
chr7 (13-85)||(18186451-18186523)
chr7 (13-97)||(48059176-48059260)
chr7 (13-72)||(13889478-13889537)
chr7 (20-94)||(18186688-18186763)
chr7 (22-97)||(44312745-44312819)
chr7 (23-97)||(6726258-6726330)
chr7 (31-97)||(6726507-6726573)
chr7 (13-107)||(7873861-7873955)
chr7 (44-94)||(19645062-19645112)
chr7 (13-77)||(35250350-35250411)
chr7 (13-98)||(7873508-7873593)
chr7 (18-98)||(20184915-20184996)
chr7 (17-105)||(28472382-28472467)
chr7 (13-98)||(45718101-45718186)
chr7 (13-69)||(10691619-10691675)
chr7 (16-99)||(15347952-15348032)
chr7 (13-97)||(24679074-24679158)
chr7 (13-105)||(48058853-48058945)
[»] chr6 (21 HSPs)
chr6 (16-99)||(12766448-12766530)
chr6 (13-98)||(3579594-3579678)
chr6 (13-98)||(238929-239011)
chr6 (22-97)||(6036644-6036719)
chr6 (16-99)||(30349347-30349429)
chr6 (13-98)||(10727424-10727509)
chr6 (16-95)||(28011359-28011436)
chr6 (13-96)||(2840790-2840873)
chr6 (16-89)||(18030945-18031015)
chr6 (22-107)||(1377447-1377530)
chr6 (22-107)||(1385195-1385278)
chr6 (13-100)||(9070099-9070186)
chr6 (13-89)||(2853436-2853511)
chr6 (13-98)||(2853645-2853731)
chr6 (16-97)||(5003089-5003169)
chr6 (17-98)||(10727189-10727270)
chr6 (13-89)||(26601690-26601765)
chr6 (23-98)||(30349595-30349671)
chr6 (23-87)||(32143491-32143555)
chr6 (15-105)||(17248873-17248963)
chr6 (13-89)||(20474935-20475010)
[»] chr3 (44 HSPs)
chr3 (13-98)||(28204479-28204561)
chr3 (16-97)||(33329611-33329693)
chr3 (16-97)||(14856546-14856627)
chr3 (13-98)||(51315714-51315799)
chr3 (16-100)||(17773167-17773251)
chr3 (16-100)||(19074468-19074552)
chr3 (13-98)||(38958075-38958158)
chr3 (13-98)||(3193012-3193096)
chr3 (13-94)||(44586016-44586097)
chr3 (20-94)||(46226927-46226998)
chr3 (36-98)||(14349361-14349423)
chr3 (13-99)||(28712692-28712777)
chr3 (13-106)||(54464393-54464486)
chr3 (36-105)||(54718986-54719055)
chr3 (16-99)||(14340731-14340814)
chr3 (8-99)||(20432188-20432279)
chr3 (23-98)||(36677523-36677597)
chr3 (23-98)||(36687605-36687679)
chr3 (18-99)||(25902588-25902669)
chr3 (13-96)||(27178141-27178223)
chr3 (22-105)||(38178692-38178775)
chr3 (13-98)||(86793-86879)
chr3 (16-98)||(25154414-25154496)
chr3 (16-96)||(47189599-47189677)
chr3 (16-107)||(12759493-12759589)
chr3 (13-96)||(19404399-19404480)
chr3 (17-94)||(4474304-4474378)
chr3 (11-62)||(42686517-42686567)
chr3 (17-99)||(43747277-43747358)
chr3 (49-95)||(48348257-48348303)
chr3 (23-97)||(53184758-53184831)
chr3 (13-94)||(27178377-27178458)
chr3 (13-98)||(44433294-44433381)
chr3 (17-86)||(25248921-25248988)
chr3 (20-98)||(28944203-28944280)
chr3 (13-106)||(38957836-38957930)
chr3 (13-63)||(51453575-51453625)
chr3 (36-97)||(53020527-53020589)
chr3 (17-62)||(22494588-22494632)
chr3 (17-86)||(29512558-29512627)
chr3 (16-97)||(53254963-53255044)
chr3 (17-98)||(53255258-53255339)
chr3 (13-100)||(33329847-33329939)
chr3 (11-63)||(54476077-54476129)
[»] chr5 (43 HSPs)
chr5 (23-100)||(3999083-3999159)
chr5 (13-98)||(12406040-12406125)
chr5 (13-96)||(35877510-35877592)
chr5 (13-98)||(2974863-2974949)
chr5 (20-94)||(3333695-3333768)
chr5 (13-99)||(36798406-36798492)
chr5 (18-100)||(43098025-43098107)
chr5 (16-100)||(37897950-37898034)
chr5 (13-94)||(20629739-20629821)
chr5 (13-94)||(25364057-25364136)
chr5 (13-95)||(25910956-25911037)
chr5 (13-98)||(35166523-35166608)
chr5 (13-98)||(6464305-6464390)
chr5 (13-98)||(27904713-27904798)
chr5 (13-100)||(40276259-40276347)
chr5 (13-108)||(20126427-20126522)
chr5 (13-96)||(32391720-32391802)
chr5 (15-98)||(34319959-34320041)
chr5 (13-96)||(39574240-39574322)
chr5 (17-99)||(20512433-20512515)
chr5 (13-100)||(16132959-16133047)
chr5 (17-100)||(24405731-24405814)
chr5 (19-97)||(3333937-3334015)
chr5 (13-63)||(20126648-20126698)
chr5 (13-87)||(31080487-31080560)
chr5 (40-98)||(42585985-42586043)
chr5 (40-100)||(18403247-18403306)
chr5 (18-94)||(24405493-24405569)
chr5 (13-100)||(36798167-36798255)
chr5 (36-99)||(19340762-19340825)
chr5 (13-95)||(20629974-20630057)
chr5 (13-100)||(40276015-40276102)
chr5 (13-99)||(12406270-12406356)
chr5 (13-62)||(19131730-19131777)
chr5 (40-98)||(20364681-20364739)
chr5 (40-98)||(24242016-24242074)
chr5 (16-62)||(32391952-32391998)
chr5 (13-59)||(35166334-35166379)
chr5 (16-77)||(26702646-26702707)
chr5 (16-77)||(26972379-26972440)
chr5 (13-98)||(36361032-36361117)
chr5 (11-63)||(22471924-22471976)
chr5 (13-69)||(43355746-43355802)
[»] chr4 (50 HSPs)
chr4 (13-98)||(35393899-35393984)
chr4 (16-99)||(35383763-35383843)
chr4 (13-100)||(21957536-21957621)
chr4 (18-97)||(50769598-50769675)
chr4 (16-95)||(49185792-49185870)
chr4 (22-100)||(53312525-53312602)
chr4 (22-94)||(14449276-14449348)
chr4 (13-97)||(49185571-49185654)
chr4 (13-100)||(23759558-23759644)
chr4 (13-95)||(1420537-1420618)
chr4 (13-98)||(53924746-53924830)
chr4 (44-100)||(43074613-43074669)
chr4 (16-94)||(50769366-50769445)
chr4 (13-86)||(2837130-2837204)
chr4 (13-106)||(12719675-12719769)
chr4 (8-89)||(14060764-14060843)
chr4 (13-98)||(25909486-25909571)
chr4 (13-94)||(37831595-37831676)
chr4 (13-95)||(21871617-21871696)
chr4 (13-95)||(21927478-21927557)
chr4 (16-86)||(8965533-8965601)
chr4 (13-84)||(16292498-16292568)
chr4 (20-99)||(51371701-51371779)
chr4 (16-98)||(1420777-1420859)
chr4 (14-100)||(19909170-19909255)
chr4 (13-105)||(27978929-27979018)
chr4 (13-99)||(29697752-29697837)
chr4 (13-98)||(53312285-53312371)
chr4 (21-97)||(2653953-2654030)
chr4 (13-98)||(2836898-2836983)
chr4 (16-97)||(6207176-6207257)
chr4 (13-98)||(44356628-44356711)
chr4 (13-96)||(21957697-21957780)
chr4 (13-96)||(35615315-35615398)
chr4 (18-69)||(49804331-49804382)
chr4 (13-99)||(2016789-2016875)
chr4 (50-100)||(4411493-4411543)
chr4 (21-98)||(6614846-6614921)
chr4 (49-98)||(11824464-11824513)
chr4 (30-99)||(37832944-37833013)
chr4 (44-97)||(43074827-43074880)
chr4 (40-100)||(3369844-3369904)
chr4 (20-88)||(6637075-6637142)
chr4 (36-68)||(8070894-8070926)
chr4 (13-100)||(10059679-10059767)
chr4 (16-95)||(14016722-14016806)
chr4 (22-94)||(27978695-27978766)
chr4 (13-100)||(51362533-51362623)
chr4 (21-94)||(51362776-51362851)
chr4 (36-96)||(54983849-54983908)
[»] chr2 (40 HSPs)
chr2 (13-97)||(34679323-34679404)
chr2 (13-97)||(15023069-15023152)
chr2 (11-97)||(16043250-16043339)
chr2 (16-99)||(37431771-37431853)
chr2 (13-98)||(6592964-6593047)
chr2 (13-98)||(19206141-19206224)
chr2 (13-98)||(14489442-14489525)
chr2 (13-98)||(32969755-32969842)
chr2 (13-72)||(43029024-43029083)
chr2 (21-98)||(5362174-5362251)
chr2 (13-94)||(6510230-6510310)
chr2 (13-98)||(14816027-14816112)
chr2 (13-94)||(34761090-34761171)
chr2 (16-101)||(43028790-43028875)
chr2 (18-100)||(25333730-25333809)
chr2 (16-98)||(5470570-5470650)
chr2 (17-97)||(37803364-37803446)
chr2 (13-97)||(18709247-18709328)
chr2 (13-99)||(35718886-35718971)
chr2 (13-97)||(36176981-36177062)
chr2 (15-99)||(34679095-34679178)
chr2 (17-97)||(39918434-39918514)
chr2 (40-98)||(6592723-6592781)
chr2 (19-84)||(14943549-14943612)
chr2 (13-106)||(14489205-14489297)
chr2 (40-97)||(31827788-31827845)
chr2 (16-77)||(4925679-4925737)
chr2 (13-94)||(5470333-5470411)
chr2 (16-94)||(12948892-12948968)
chr2 (11-62)||(35173041-35173092)
chr2 (13-99)||(44617969-44618053)
chr2 (12-62)||(16043124-16043174)
chr2 (44-86)||(18224992-18225033)
chr2 (13-70)||(27489666-27489724)
chr2 (13-99)||(35500038-35500124)
chr2 (13-62)||(44297598-44297645)
chr2 (16-69)||(35500324-35500377)
chr2 (17-69)||(8740422-8740474)
chr2 (13-97)||(14815698-14815782)
chr2 (41-97)||(28851674-28851730)
[»] scaffold1458 (1 HSPs)
scaffold1458 (23-98)||(1470-1545)
[»] scaffold0515 (1 HSPs)
scaffold0515 (23-98)||(3638-3713)
[»] scaffold0417 (1 HSPs)
scaffold0417 (13-107)||(9566-9661)
[»] scaffold0306 (1 HSPs)
scaffold0306 (23-98)||(3638-3713)
[»] scaffold0248 (2 HSPs)
scaffold0248 (16-89)||(642-716)
scaffold0248 (13-94)||(405-487)
[»] scaffold0025 (1 HSPs)
scaffold0025 (13-104)||(19033-19123)
[»] scaffold0041 (1 HSPs)
scaffold0041 (20-63)||(94039-94082)
[»] scaffold0092 (1 HSPs)
scaffold0092 (44-98)||(37783-37837)
[»] scaffold0011 (1 HSPs)
scaffold0011 (16-86)||(145364-145434)
[»] scaffold0001 (1 HSPs)
scaffold0001 (16-98)||(405427-405508)
[»] scaffold0735 (1 HSPs)
scaffold0735 (39-96)||(6061-6118)
[»] scaffold0328 (1 HSPs)
scaffold0328 (16-98)||(9654-9731)
[»] scaffold0150 (1 HSPs)
scaffold0150 (13-62)||(9766-9815)
[»] scaffold0250 (1 HSPs)
scaffold0250 (13-96)||(3573-3657)


Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 13 - 333
Target Start/End: Complemental strand, 41487284 - 41486965
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttatcctcc 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  41487284 tagggggcggttttgtagttttgtttcttagggggtcaaaatcgcaacttcgtgaaaattcgggggcgaaaactgctattaagcctttcctttatcctcc 41487185  T
Q  113 ttaggacttcaacattttccgccacaaccatgttctttggggggacttctgttgtgacttcctatcccgataacttccgttgctcccggactcgaatcta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41487184 ttaggacttcaacattttccgccacaaccatgttctttggggg-acttctgttgtgacttcctatcccgataacttccgttgctcccggactcgaatcta 41487086  T
Q  213 ctcggttttcccctctgtagcaactctttgattgcgtccttcagctgactgcactactcggtcatgtagccatggccgtggtggaatcgacaaaatttgt 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41487085 ctcggttttcccctctgtagcaactctttgattgcgtccttcagctgactgcactactcggtcatgtagccatggccgtggtggaatcgacaaaatttgt 41486986  T
Q  313 cttgtctactcatggaaaatc 333  Q
    |||||||||||||||||||||    
T  41486985 cttgtctactcatggaaaatc 41486965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 37813246 - 37813159
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||| ||| |||||||| |||||||| || || ||||||||| |||||||||||||||| ||||||||||    
T  37813246 tagggggcggttttgtagttttttttcttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagccttt 37813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 17070982 - 17070899
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||    
T  17070982 ggttttgttgtttt-ttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcctttttttt 17070899  T

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Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 17577290 - 17577373
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||    
T  17577290 ggttttgttgtttt-ttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcctttttttt 17577373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 20853460 - 20853377
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||  ||||||| |||||| ||||||||| ||||||||    
T  20853460 tagggggtggttttgtagtttt--tttttagggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcct 20853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 16982710 - 16982625
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||| |||||||||| | ||||||    
T  16982710 tagggggcggttttgtagttttttttcttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagcct 16982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 25897073 - 25896993
Alignment:
Q  14 agggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||| |  |||||| |||||| ||||||||| ||||    
T  25897073 agggggcggttttgtagttttttttgttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 33298567 - 33298639
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    |||||||||||||||||||||| ||    |||||| |||||||||||||||||||||||| || |||||||||||||    
T  33298567 tagggggcggttttgtagttttctt----agggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgct 33298639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 35213109 - 35213023
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    ||||| |||||||||||||   ||||||||||||||||||||||||| || |||||| | |||||||||| ||| |||||||||| ||||    
T  35213109 ggggcagttttgtagtttt---ttttagggggtcaaaatcgcaactttgtcaaagttagtgggcgaaaaccgctattaagcctttttttt 35213023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 22192387 - 22192310
Alignment:
Q  11 catagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    |||| ||||||||||| || |||| ||| |||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  22192387 cataaggggcggttttttaatttt-tttcttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgct 22192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 26824071 - 26824146
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||  |||| |||||||||| ||| ||||    
T  26824071 gttttgtagttttttttcttagagggtcaaaatcgcaacttcgtgaaagtt-aggggtgaaaactgctattatgcct 26824146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 14880565 - 14880638
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactg 87  Q
    |||| ||||||||||| ||||| ||| |||||||| |||||| ||||||||||||||||| ||||||||| ||||    
T  14880565 taggaggcggttttgtggtttt-tttcttagggggccaaaattgcaacttcgtgaaagttagggggcgaacactg 14880638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 41602844 - 41602926
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||| ||| ||||| ||  |||||||||||||  ||||| || |||||| ||||||||| ||||||||    
T  41602844 ggggcggttttgtagttttttttcttaggaggctaaaatcgcaactttttgaaacttagggggctaaaactgctattaagcct 41602926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 9762437 - 9762513
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||| ||||| | |||| ||||||||||||||||| |||||| || |||||||| |||| |||||||    
T  9762437 cggttttgtagtttt-tttttcaaggggccaaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaagcc 9762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 28349538 - 28349622
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||| ||||||||||| |||| ||| |||||||| |||||||||||||| | ||||||| |||||| |||||| || ||||||||    
T  28349538 tagggagcggttttgtaatttt-tttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcct 28349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 27545595 - 27545666
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||| |||| |||||| ||||| ||| ||||    
T  27545595 gttttgtagtttt-tttcttagggggccaaaatcgcaacttcgtgatagttagggggcaaaaaccgctattaa 27545666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 45177285 - 45177201
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||| || |||||||||||| ||| ||||||| ||||||||||||||| | ||||||| || ||| ||| ||||| |||||||    
T  45177285 taggggacgattttgtagttttttttcttaggggatcaaaatcgcaactttgagaaagttaggaggctaaatctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 23475708 - 23475621
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||  ||  ||| |||||||||||| ||||||| |||||  | |||||| ||||||||  ||||||||||    
T  23475708 tagggggcggttttgtagtttatttagttaaggggtcaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagccttt 23475621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 23702207 - 23702122
Alignment:
Q  16 ggggcggttttgtagttttgtttttt---agggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||| ||| ||   |||||  |||||||| ||||| |||||||||  ||||||||||||||| ||||||||    
T  23702207 ggggcggttttgtagttttttttcttcttaggggaccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaagcct 23702122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 37263415 - 37263356
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||| ||||||||||||||||||| ||||||  ||||||||||||||| |||| ||||    
T  37263415 ttagggagtcaaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaacctt 37263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 521677 - 521758
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||| |||| ||| | |||||   |||||||||||||||||||| || ||||| |||||||||| |||||||||    
T  521677 gggcggttttgtaatttt-tttctcaggggtctaaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaagcctt 521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 6807245 - 6807172
Alignment:
Q  24 tttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||| ||| |||||||| |||||||||||||||| |||||||  ||||| |||||| || ||||||||    
T  6807245 tttgtagtttt-tttcttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaactactattaagcct 6807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 29791230 - 29791288
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaag 70  Q
    |||||||||||||||||||||| |||  ||| |||| ||||||||||||||||||||||    
T  29791230 tagggggcggttttgtagttttttttccttatgggggcaaaatcgcaacttcgtgaaag 29791288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 45457040 - 45456976
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactg 87  Q
    |||||||||||||| ||||||||||  |||||||| ||||||||| |||||| ||||||||||||||    
T  45457040 ggttttgtagtttt-ttttttaggga-tcaaaatcacaacttcgtaaaagttagggggcgaaaactg 45456976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 30539221 - 30539305
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||| ||||||||||||||| ||| |||||||  |||||||||||||| | |||||||   |||| ||||||||| ||||||||    
T  30539221 taggggacggttttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagtt-aagggctaaaactgctattaagcct 30539305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 45163690 - 45163746
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    |||||||||||||||||||||  ||  |||||||| ||||||||||||||| |||||    
T  45163690 tagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaa 45163746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 17512181 - 17512106
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgc 88  Q
    ||||||||| |||||||||||  ||  |||||||| ||||||||||||||| |||||  | |||||| ||||||||    
T  17512181 tagggggcgtttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaatatagggggccaaaactgc 17512106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 20228305 - 20228231
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||  || ||||||||||| |||||||||||||||||| |||||| || | ||||||||| | |||||||    
T  20228305 gttttgtagcatttttttttagggg-tcaaaatcgcaacttcgtaaaagttaggagacgaaaactgttattaagcc 20228231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 6807399 - 6807480
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||| ||||||||||||   |||||||| |||||||||| ||||||| | ||||||| |||| | |||| |||| |||||||    
T  6807399 tagggggtggttttgtagtt---ttttttagagggtcaaaattgcaactttgggaaagttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 25144173 - 25144251
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||| ||||||||||||||  || ||||||| | ||||||||||||||||||| ||| || |||||||| |||| ||||    
T  25144173 tagggggtggttttgtagtttt--ttcttaggggct-aaaatcgcaacttcgtgaatgttaggaggcgaaaattgctattaa 25144251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 26823910 - 26823828
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||| | |||||||||||| ||| ||| ||||||||||||| ||||| | ||||||| | |||  ||||||||| |||||    
T  26823910 tagggggtgattttgtagttttttttcttaaggggtcaaaatcgtaactttgagaaagttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 29657951 - 29658009
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||  |||||||||||||||||  |||||||| ||| |||||||||||| ||||    
T  29657951 ttttttagatggtcaaaatcgcaacttgatgaaagttagggagcgaaaactgctattaa 29658009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 32768487 - 32768536
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaag 70  Q
    |||||||||||||||||   | |||||| ||||||||||||||||||||||||    
T  32768487 ggcggttttgtagtttt---tcttagggagtcaaaatcgcaacttcgtgaaag 32768536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 35795561 - 35795647
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||| |||||||||||||||  ||  |||||||| ||||||| ||||||| |||||  | |||||| ||||||||  |||||||||    
T  35795561 tagggtgcggttttgtagtttatttagttagggggccaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcctt 35795647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 39889825 - 39889771
Alignment:
Q  44 ggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||| |||||| |||||||||||||||||  | ||||||||||||| ||||||||    
T  39889825 ggggccaaaattgcaacttcgtgaaagttaagaggcgaaaactgctattaagcct 39889771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 3676200 - 3676144
Alignment:
Q  15 gggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagtt 72  Q
    |||||||||||||||||||| ||| ||| |||  ||||||||||| ||||||||||||    
T  3676200 gggggcggttttgtagttttttttctta-gggaccaaaatcgcaaattcgtgaaagtt 3676144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 41487440 - 41487520
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||||||| ||| ||| ||| | ||||||||||||| |  |||||| | |||| ||||||||| ||||    
T  41487440 tagggggcggttttgtagttttttttcttaagggct-aaaatcgcaactttggaaaagttagagggctaaaactgctattaa 41487520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 45516008 - 45515968
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  45516008 ggttttgtagtttt-ttttttaggggttcaaaatcgcaactt 45515968  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 45522421 - 45522506
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| |||  ||| ||||||||  |||||||||||||| | |||  | |||||  ||||||||| ||||||||    
T  45522421 tagggggcggttttgtattttattttgttagggggctaaaatcgcaacttcttaaaacatagggggtcaaaactgcttttaagcct 45522506  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 755960 - 755900
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||| ||||||||||||||| |||||  | | |||| ||||||||| ||||||||||    
T  755960 ttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagccttt 755900  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 7011009 - 7010926
Alignment:
Q  13 tagggggcggttttgtagttttgttttt--tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||| ||| ||||| |||||  |||||||||| |||||||||||| ||||| || | |||  ||||||||| ||||    
T  7011009 tagggggcggttctgttgttttttttttcttagggggtcagaatcgcaacttcttgaaacttagagggttaaaactgctattaa 7010926  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 18092988 - 18092913
Alignment:
Q  19 gcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    |||||||||||||||| ||| ||| | || ||||||||||||||| || || || |||||| ||||||||| |||||    
T  18092988 gcggttttgtagtttt-tttcttacgaggccaaaatcgcaacttcttgtaacttagggggctaaaactgctattaag 18092913  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 23702375 - 23702450
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||| |||| ||| ||||||||  |||||||||||||   ||||||| |||||| ||||||||| |||||||||    
T  23702375 ttttgtaatttt-tttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcctt 23702450  T

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Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 39642284 - 39642198
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39642284 tagggggcggttttgtagtttttttatttagagggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcctt 39642198  T

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Target: chr1; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 3377585 - 3377498
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| |  |||||| |||||| ||||||||| ||||||||||    
T  3377585 tagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagccttt 3377498  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 25085478 - 25085398
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| |||||||||||||||| ||||||||    
T  25085478 gggcggttttgtagttttttttcttagggg-tcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcct 25085398  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 23891740 - 23891662
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||||| ||| |||||||||||| |||||    
T  23891740 ggggcggttttgtagtttt-tttcttagggggccaaaatcacaacttcgtgaaagttagggagcgaaaactgctattaag 23891662  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 16874589 - 16874511
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||||||||| |||| |  ||||||| |||||||||||||| |||||| ||||||||||| |||| ||||    
T  16874589 ggggcggttttgtagtttttttttcttaggggtcataatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 16874511  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 14979031 - 14979114
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||||| || ||| ||||| || |||||| |||||||| |||||||| ||||||||||||| || |||||||    
T  14979031 tagggggcggttttgtagtatt-tttcttaggaggccaaaattgcaacttcatgaaagttagggggcgaaaacttctattaagcc 14979114  T

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Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 17760923 - 17761007
Alignment:
Q  16 ggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||||| |||| ||||||| ||||||| |||||||||| ||||||  | | ||||||||||| |||||||||    
T  17760923 ggggcggttttgtagtttttttttcttaggggatcaaaattgcaacttcgtaaaagttaagagacgaaaactgctattaagcctt 17761007  T

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Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 46573057 - 46573145
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttc 101  Q
    |||||||| || |||||||||| ||| |||||||  ||||||||||||||||| |||||| | || | ||||||||| |||||||||||    
T  46573057 tagggggcagtgttgtagttttttttcttaggggaccaaaatcgcaacttcgtaaaagttagaggacaaaaactgctattaagcctttc 46573145  T

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Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 17760768 - 17760679
Alignment:
Q  13 tagggggcggttttgtagttttgttttt--tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||| |||||||||||||| |||||  ||||||| |||||||||||||| | | ||||| |||||| ||| ||||| ||||||||||    
T  17760768 tagggggtggttttgtagttttttttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagccttt 17760679  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 50226476 - 50226402
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactg 87  Q
    ||||||||||||||||||| || ||| |||||||| |||||||||||||| |  |||||| |||||| |||||||    
T  50226476 tagggggcggttttgtagtattctttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactg 50226402  T

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Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 23220792 - 23220876
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| |||   |||||  |||||||| |||||||| |||||| |||||||||||||||| | ||||||    
T  23220792 tagggggcggttttgtagtttt-tttcagaggggaccaaaatcgtaacttcgtaaaagttagggggcgaaaactgctatcaagcct 23220876  T

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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 3377742 - 3377825
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||| ||||||||||||||| |||  ||||||| ||||||| |||||| | ||||||| |||||| ||||||||| |||||||    
T  3377742 taggggacggttttgtagtttt-tttcctagggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

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Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 25486479 - 25486527
Alignment:
Q  50 aaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcct 25486527  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 27864252 - 27864185
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    ||||| |||||||||||||   ||||||||| ||||||||||||||||||||||||| || | ||||||||    
T  27864252 ggggcagttttgtagtttt---ttttaggggatcaaaatcgcaacttcgtgaaagttaggagacgaaaact 27864185  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 5287805 - 5287887
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||||| ||||||| |||| |||||||||||| |||||||||||||| | |||||||  ||||  ||||||||| ||||||    
T  5287805 tagggggcgattttgtaatttt-ttttttagggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 18632605 - 18632651
Alignment:
Q  49 caaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  18632605 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 18632651  T

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Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 41915755 - 41915837
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||| |||||||||||||  || |||||||| |||||||||||||||| |||||  | |||| | ||||||||| ||||||||    
T  41915755 ggggtggttttgtagtttatttatttaggggatcaaaatcgcaacttcttgaaatataggggaccaaaactgctattaagcct 41915837  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 46895770 - 46895856
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||| |||  ||  ||| |||||||||||||||||||| |||||  | |||||| ||||||||  |||||||||    
T  46895770 tagggggcggttttgtaatttatttagttatggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgcaattaagcctt 46895856  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 1853528 - 1853474
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    |||| |||||||||||||||||  ||||||| || ||||||||||||||||||||||    
T  1853528 taggtggcggttttgtagtttt--tttttagaggatcaaaatcgcaacttcgtgaaa 1853474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 42924386 - 42924329
Alignment:
Q  39 tttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||||||||||||| |||||||||||||||| | |||| |||||| || ||||||    
T  42924386 tttagggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaagc 42924329  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 32295191 - 32295267
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| |  ||||||  ||||| |||||| || |||||||    
T  32295191 ggttttgtaattttttttcttagggggtcaaaatcgcaactttgaaaaagtttaggggctaaaactcctattaagcc 32295267  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 48441149 - 48441073
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    |||||||||||||||||||||| || |||| ||||||||||| |||| ||  | ||| || |||||| |||||||||    
T  48441149 tagggggcggttttgtagtttttttatttaaggggtcaaaattgcaattttttaaaacttagggggctaaaactgct 48441073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 46912238 - 46912187
Alignment:
Q  49 caaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||||||||||  || |||||||||||| |||| |||||    
T  46912238 caaaatcgcaacttcgtgaaagttaaggagcgaaaactgctattaaaccttt 46912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 3612188 - 3612138
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    |||||| || |||||||||||| ||| ||||||| ||||||||||||||||    
T  3612188 taggggacgattttgtagttttttttcttaggggttcaaaatcgcaacttc 3612138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 6569607 - 6569530
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||| |||| ||| |||||||||||||||| ||| || || ||| || || ||||||||||||| ||||    
T  6569607 ggggcggttttgtaatttt-tttcttagggggtcaaaatcacaattttgtaaaaattaggaggcgaaaactgctattaa 6569530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 37008292 - 37008218
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||||| |||  ||| |||||||| ||||||||||||||| |||||  | |||||| ||||||||| ||||||    
T  37008292 gttttgtattttattttgttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 45739016 - 45738935
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||||| | ||||||| ||| |  |||| |||| ||||||||    
T  45739016 ggggcggttttgtagtttt-ttccttagggggtcaaaatcacaactttgagaaagttagggagttaaaattgctattaagcct 45738935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 3612416 - 3612504
Alignment:
Q  13 tagggggcggttttgtagttttgt--tttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||||||||| |  || ||||| |  ||||||| ||||||| ||||| || |||| | ||||||||| |||||||||    
T  3612416 tagggggcggttttgtagttttcttcttcttaggagaccaaaatctcaacttcttgaaacttaggggactaaaactgctattaagcctt 3612504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 12960929 - 12960845
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||| ||||||||||||||||| |||||| || || |||||||||||||| |  |||||| | |||| ||||||| | ||||||||    
T  12960929 taggaggcggttttgtagtttt-ttttttgggaggccaaaatcgcaactttgaaaaagttagcgggctaaaactgttattaagcct 12960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 16874736 - 16874816
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggt-caaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||||||||||||||| ||| |||| |||| |||||| ||||||| | ||||||| |||||  ||||||||| ||||||    
T  16874736 ggggcggttttgtagtttt-tttcttagagggtccaaaattgcaactttgagaaagttagggggttaaaactgctattaagc 16874816  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 51251378 - 51251419
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    ||||||||| |||||||||||||||||||| |||||| ||||    
T  51251378 ttttttaggaggtcaaaatcgcaacttcgtaaaagttagggg 51251419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 12075013 - 12074953
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||||| |||||  | ||| || ||||||||| ||||| ||||    
T  12075013 ttagggggtcaaaatcgcaacttcttgaaacatagggagccaaaactgctattaagtcttt 12074953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 14978880 - 14978797
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||| ||||||||||||| ||||| | ||   |||||||||||||| |  |||||| |||||| ||||||||| |||||||    
T  14978880 tagggggcagttttgtagtttt-tttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 40876978 - 40877050
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgc 88  Q
    ||||||||||||||||||  ||  |||||||| ||||||||||||||| || ||  | |||||| ||||||||    
T  40876978 ggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttggaacatagggggccaaaactgc 40877050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 41997718 - 41997643
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||||| | ||| ||| |||| |||||||||||||| |||||| || |||||| |||| |||| ||||    
T  41997718 ggcggttttgtagttgt-tttcttatggggccaaaatcgcaactttgtgaaaattagggggcaaaaattgctattaa 41997643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 45739186 - 45739222
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagtt 72  Q
    ||||||||| || ||||||||||||||||||||||||    
T  45739186 ttttttaggaggccaaaatcgcaacttcgtgaaagtt 45739222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 46895521 - 46895437
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||| | ||||||||||||  ||  |||| || |||||||||||||||| |||||  | |||||| ||||||||| |||||||    
T  46895521 taggggacagttttgtagtttatttagttagaggatcaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcc 46895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 46160 - 46068
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||| ||||    
T  46160 tagggggcggttttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggggcgaaaactgctataaagcctttatttt 46068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 20185147 - 20185239
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| || |||| ||||| ||||||    
T  20185147 taggaggcggttttgtagtttt--tttttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactactattaatcctttattttat 20185239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 28350200 - 28350113
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  28350200 tagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagccttt 28350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 4049952 - 4050038
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||  ||||||||||||||| ||||||||||    
T  4049952 tagggggcggttttgtagtttt-tttcttagggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagccttt 4050038  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 14247374 - 14247284
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    ||||||||||||||||||| ||| ||||| || ||||||| |||||||||||||||| || ||||||||||||| |||||||||| ||||||    
T  14247374 ggggcggttttgtagtttt-tttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaaaactgctattaagcctttattttat 14247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 15348187 - 15348274
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||||| ||||| ||| |||||| |||||||||    
T  15348187 tagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaagttagggggtgaatactgctattaagcctt 15348274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 28785841 - 28785754
Alignment:
Q  13 tagggggcggttttgtagttttgttttt-tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||| ||||||||||||||| ||||||| |||||||| ||| |||||    
T  28785841 tagggggcggttttgtagtttttttttcctagggggccaaaatcgtaacttcgtgaaagttagggggcggaaactgctattatgcctt 28785754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 20505241 - 20505323
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||| | |||| | ||||| |||||||||| |||||||    
T  20505241 tagggggcggttttgtagtttt--tttttagggggccaaaatcgcaacttcataaaagctagggggtgaaaactgctattaagcc 20505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 5172754 - 5172838
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||| ||| | |||||| | ||||||||    
T  5172754 tagggggcggttttgtagttttttttccttagggggtcaaaatcgcaacttcgtaaaagttagggagtgaaaacagttgttaagc 5172838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 36580357 - 36580274
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||| ||||||||||||||| ||| |||||||  ||||||| |||||||||||||||| |||| ||||||||||| |||||||    
T  36580357 taggggacggttttgtagtttt-tttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaactgctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 11373925 - 11373846
Alignment:
Q  19 gcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||| |||  |  |||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||    
T  11373925 gcggttttgtagttttttttccttaggggtcaagatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 11373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 9500131 - 9500213
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||||||| |||| |||||||  ||||||||||||||| ||||| || |||||| ||||||||| ||||    
T  9500131 tagggggcggttttgtagtttttttttcttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 6792026 - 6792107
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||||||| ||| |||||||  |||||||||||||| |  |||||| |||||| ||||||||| ||||    
T  6792026 tagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 8074106 - 8074187
Alignment:
Q  15 gggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    |||| ||||||||||||||| |||| ||| ||||  ||||||| ||||||||||||||| |||||||||||||||| |||||    
T  8074106 ggggacggttttgtagtttttttttcttatggggctaaaatcgtaacttcgtgaaagttagggggcgaaaactgctattaag 8074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 15029145 - 15029096
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  15029145 tagggggcggttttgtagttttttttattagggggtcaaaatcgcaactt 15029096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 18504478 - 18504556
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||| |||||||  |||||||||| |||||||||||||||| |||||||| |||| ||||||||| | ||||||||||    
T  18504478 cggttttttagtttt--tttttaggggatcaaaatcgcaacttcatgaaagttaggggacgaaaactgttattaagccttt 18504556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 21505842 - 21505923
Alignment:
Q  8 aagcatagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||| |  |||||| |||| | |||||||||    
T  21505842 aagcatagggggcagttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgct 21505923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 17876395 - 17876474
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||| |||| ||| ||| |||| |||||||| ||||||||||||||| ||||| |||||||||| ||||||||||    
T  17876395 cggttttgtaatttt-tttcttaaggggccaaaatcgtaacttcgtgaaagttagggggtgaaaactgctattaagccttt 17876474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 21748082 - 21748128
Alignment:
Q  51 aaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcc 21748128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 21939327 - 21939389
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| ||||||||||||||||||| | || |||||| ||||||||| ||||||||    
T  21939327 ttttttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcct 21939389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 23826260 - 23826337
Alignment:
Q  23 ttttgtagttttgttttt--tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| |||||  || |||| |||||||||||||||||||||||| |||| | ||||||||| ||||||||    
T  23826260 ttttgtagttttttttttcttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcct 23826337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 46266491 - 46266569
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||| ||| |||||||| |||||| |||||||| ||||| || ||| || ||||||||| |||||||||    
T  46266491 ggttttgtagttttttttcttaggggggcaaaattgcaacttcttgaaacttagggagctaaaactgctattaagcctt 46266569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 47909777 - 47909696
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||| |||||||||||| ||| ||||||||  ||||||||||||| | ||||||| |||||| ||||||||| |||||    
T  47909777 tagggggcgattttgtagtttt-tttcttagggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 28350376 - 28350436
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    ||||||||||||||||||| ||| |||||||| |||| ||||||||||||||||||| ||||    
T  28350376 ggggcggttttgtagtttt-tttcttagggggccaaagtcgcaacttcgtgaaagttagggg 28350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 3382062 - 3382144
Alignment:
Q  24 tttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    ||||||||||| ||| ||| |||  ||||||| ||||||||| |||||| |||||| ||||||| ||||||||||||| |||||    
T  3382062 tttgtagtttt-tttcttaagggaccaaaatcacaacttcgtaaaagttagggggcaaaaactgatgttaagcctttcatttat 3382144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 21505696 - 21505613
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||||| ||| |||  ||| | |||| |||||||||||||||||  ||| ||||| ||||| |||||||||    
T  21505696 ggggcggttttgtagttttttttcttaaagggcccaaattgcaacttcgtgaaagttaagggacgaaagctgctattaagcctt 21505613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 40872243 - 40872200
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  40872243 cggttttgtagttttttttcttagggggtcaaaatcgcaacttc 40872200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 41243724 - 41243643
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||| ||| ||||||||  ||||| ||||||| |  |||||| |||||| ||||||||| ||||||||    
T  41243724 ggggcggttttgtagtttt-tttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagcct 41243643  T

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Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 45697544 - 45697486
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||| |||||||||||||||| ||||||| |||| ||||||||| | ||||||||    
T  45697544 ttagggggccaaaatcgcaacttcgagaaagttaggggacgaaaactgttattaagcct 45697486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 3247404 - 3247472
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaa 84  Q
    |||| |||||||||||||||||   ||||| |||| ||||||| |||||||||||||||| |||| ||||||    
T  3247404 taggaggcggttttgtagtttt---ttttatggggccaaaatcacaacttcgtgaaagttaggggacgaaaa 3247472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 24433034 - 24432978
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    ||||||||||| ||| ||| |||||||| |||||||||||||||||||||||| ||||    
T  24433034 cggttttgtagcttt-tttcttagggggccaaaatcgcaacttcgtgaaagttagggg 24432978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 41243877 - 41243958
Alignment:
Q  17 gggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||| |||||||||||| |||| |||||| | |||||||| ||||| ||||||||| |||  ||||||||||| |||||||    
T  41243877 gggcgattttgtagtttttttttcttagggtgccaaaatcgtaactttgtgaaagttagggaccgaaaactgctattaagcc 41243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 18186523 - 18186451
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaac 85  Q
    |||| ||||||||||||||||| ||| |||   || ||||||||||||||| | |||||| ||||||||||||    
T  18186523 taggaggcggttttgtagttttttttcttaaaaggccaaaatcgcaacttcataaaagttagggggcgaaaac 18186451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 48059176 - 48059260
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||||||||||| ||| || ||| | ||||||| ||||||| | ||| || |||| | ||||||||| |||||||    
T  48059176 tagggggcggttttgtagttttttttcttggggtgccaaaatcacaacttcttaaaacttaggggcctaaaactgctattaagcc 48059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 13889537 - 13889478
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagtt 72  Q
    |||| ||||||||||||||| | |||||||||||  ||||||  ||||||||||||||||    
T  13889537 taggaggcggttttgtagttgttttttttaggggaccaaaattacaacttcgtgaaagtt 13889478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 18186688 - 18186763
Alignment:
Q  20 cggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||| ||||||| |||| ||||||||||||||||| ||||| |  |||||| |||||| ||||||||| ||||    
T  18186688 cggttttatagtttttttttcttagggggtcaaaatcgtaactttggaaaagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 44312819 - 44312745
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||  || ||||||||||| |||||||||||||||||| |||||| || | ||||||||| | |||||||    
T  44312819 gttttgtagcatttttttttagggg-tcaaaatcgcaacttcgtaaaagttaggagacgaaaactgttattaagcc 44312745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 6726330 - 6726258
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||| ||||||| ||| |||| |||||||||||||||||||||||||| |  ||||||||||||| | |||||||    
T  6726330 ttttatagtttt-tttcttagagggtcaaaatcgcaacttcgtgaaaggt-aggggcgaaaactgttattaagcc 6726258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 6726507 - 6726573
Alignment:
Q  31 ttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||| ||| |||||||| | |||||||||||||||||||||| |||| | ||||| ||| |||||||    
T  6726507 ttttctttcttagggggcctaaatcgcaacttcgtgaaagttaggggacaaaaacagctattaagcc 6726573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 7873861 - 7873955
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    |||||||||||||||||||||  ||  |||||| | ||||||| ||| ||| |||||  | |||||| ||||||||  |||||||||| ||||||    
T  7873861 tagggggcggttttgtagtttatttagttagggagccaaaatcacaatttcttgaaacatagggggccaaaactgcaattaagcctttattttat 7873955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 19645062 - 19645112
Alignment:
Q  44 ggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||| ||||||||||||||||||||||||  |||||||||| |||| ||||    
T  19645062 ggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaattgctattaa 19645112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 35250350 - 35250411
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    |||||||| |||||| ||||||   ||||||||||||||||||||||||| || |||||| ||||    
T  35250350 tagggggcagttttgcagtttt---ttttagggggtcaaaatcgcaactttgtcaaagttagggg 35250411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 7873593 - 7873508
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||  ||  |||||||| ||||||||||||| | |||||  | |||||  ||||||||  ||||||||    
T  7873593 tagggggcggttttgtagtttatttagttagggggccaaaatcgcaactccttgaaacatagggggtcaaaactgcaattaagcct 7873508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 20184996 - 20184915
Alignment:
Q  18 ggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||||| |  |||||| ||| || ||||||| | ||||||||    
T  20184996 ggcggttttgtagtttttttttcttagggggctaaaatcgcaactttggaaaagttagggagctaaaactgttattaagcct 20184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 28472467 - 28472382
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    ||||| ||||||||||||  || ||||||||||||||||||||||| |  ||||||  ||||| ||||||||| |||||| ||| ||||    
T  28472467 gggcgattttgtagtttt--ttcttagggggtcaaaatcgcaactttggaaaagtt-aggggctaaaactgctattaagcttttttttt 28472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 45718101 - 45718186
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||| |||||||||||| ||| |||   |  |||| ||||||||||||||||||| || ||| |||| |||| ||||||||    
T  45718101 tagggggcgattttgtagttttttttcttaattgaccaaattcgcaacttcgtgaaagttaggaggcaaaaattgctattaagcct 45718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 10691619 - 10691675
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    |||||||||||||||||||||  ||  |||||||| |||||||| |||||| |||||    
T  10691619 tagggggcggttttgtagtttatttagttagggggccaaaatcgtaacttcttgaaa 10691675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 15348032 - 15347952
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||| ||||||||||||||  || ||||||| |||||||||||||||   ||||||| |||||| ||||| ||| |||||||||    
T  15348032 ggggtggttttgtagtttt--ttcttagggg-tcaaaatcgcaactttaggaaagttagggggctaaaacggctattaagcctt 15347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 24679074 - 24679158
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||| |||||||| |||  ||| |||||||| ||||||||||| ||| |||||  | |||||| ||||||| | |||||||    
T  24679074 tagggggctgttttgtattttattttgttagggggccaaaatcgcaatttcttgaaacatagggggccaaaactgttattaagcc 24679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 48058945 - 48058853
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||||| || |||||||||||| ||| ||| |||| ||||||| ||||||  ||||| || |||||  ||||||||| |||| ||||| ||||    
T  48058945 taggggacgattttgtagttttttttcttaaggggccaaaatctcaacttgttgaaacttagggggttaaaactgctattaatcctttttttt 48058853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 12766448 - 12766530
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  12766448 ggggcggttttgtagtttt-ttttttagggggccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcctt 12766530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 3579678 - 3579594
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||  ||| ||||||||||| ||||||||    
T  3579678 tagggggcggttttgtagtttt-ttttttacggggccaaaatcgcaacttcgtgaaagttaagggacgaaaactgctattaagcct 3579594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 239011 - 238929
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||| || ||||||||||||   ||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||    
T  239011 taggggacgattttgtagtttt---ttttaggaggtcaaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaagcct 238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 6036719 - 6036644
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||  ||| ||| ||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||    
T  6036719 gttttgtaactttttttcttagggggtcaaaatcgcaacttcgtggaagtttgcgggcgaaaactgctattaagcc 6036644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 30349429 - 30349347
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||| | ||||||| | |||| ||||||||| |||||||||    
T  30349429 ggggcggttttgtagtttt-tttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcctt 30349347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 10727424 - 10727509
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| |||||||| ||||||| |||||| |  |||||| |||||| ||||||||| ||| ||||    
T  10727424 tagggggcggttttgtagttttttttcttagggggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgcct 10727509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 28011359 - 28011436
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||||||||||||| | | ||||||   |||||||||||||||||||||||| ||||| |||||||||| |||||    
T  28011359 ggggcggttttgtagttttttctcttaggga--caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaag 28011436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 2840873 - 2840790
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||| |||||||||| |||| |||||||||||  |||||||||||||| || |||||| | | |||||||||||| ||||||    
T  2840873 taggggacggttttgtattttttttttttaggggaccaaaatcgcaactttgtaaaagttggagagcgaaaactgctattaagc 2840790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 18031015 - 18030945
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    |||||| ||||||||||||   ||||||| || |||||||||||||||||||||||| ||||| ||||||||||    
T  18031015 ggggcgattttgtagtttt---ttttaggaggccaaaatcgcaacttcgtgaaagttagggggagaaaactgct 18030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 1377447 - 1377530
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    ||||||||||||| ||| |||||||  |||||||||||||||||||||||| |||| ||||||||| | |||| ||||| ||||||    
T  1377447 gttttgtagtttt-tttcttaggggc-caaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaaccttttttttat 1377530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 1385195 - 1385278
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    ||||||||||||| ||| |||||||  |||||||||||||||||||||||| |||| ||||||||| | |||| ||||| ||||||    
T  1385195 gttttgtagtttt-tttcttaggggc-caaaatcgcaacttcgtgaaagttaggggacgaaaactgatattaaaccttttttttat 1385278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 9070099 - 9070186
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||| |||  ||| |||| |||| |||||||||||||| |||||  | |||||| |||| |||| ||||||||||    
T  9070099 tagggggcggttttgtattttactttattagagggttaaaatcgcaacttcttgaaacatagggggccaaaaatgctattaagccttt 9070186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 2853511 - 2853436
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagtt-cgggggcgaaaactgct 89  Q
    |||||| |||||||||||||||  || ||||||||  |||||||||||||||||||||||  ||||| ||||||||||    
T  2853511 taggggacggttttgtagtttt--ttcttagggggcgaaaatcgcaacttcgtgaaagttatgggggtgaaaactgct 2853436  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 2853645 - 2853731
Alignment:
Q  13 tagggggcggttttgtagttttgtttttta-gggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||| | ||||||| || ||  ||||||||| ||||||||    
T  2853645 tagggggcggttttgtagttttttttcttaggggggccaaaattgcaactttgagaaagttaggaggttaaaactgctattaagcct 2853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 5003169 - 5003089
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||| |||||| ||||||| ||| |||||  ||||||||||||||||| | |||||| |||||||||||||| | |||||||    
T  5003169 ggggtggttttatagtttt-tttcttaggaagtcaaaatcgcaacttcttaaaagttagggggcgaaaactgttattaagcc 5003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 10727270 - 10727189
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||| ||||||||||||| ||| ||||| |  ||||||| ||||||||  |||||| || ||||||||||||| ||||||||    
T  10727270 gggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttaggaggcgaaaactgctattaagcct 10727189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 26601690 - 26601765
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    |||||||||||||| ||||||| ||| ||| ||||   |||||||||||||||||||||| || ||| |||||||||    
T  26601690 tagggggcggttttatagtttt-tttcttaaggggcagaaatcgcaacttcgtgaaagttaggaggcaaaaactgct 26601765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 30349595 - 30349671
Alignment:
Q  23 ttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| |||| |||||||| |||||||||||||| |  |||||| |||| | ||||||||| ||||||||    
T  30349595 ttttgtagtttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcct 30349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 32143491 - 32143555
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactg 87  Q
    |||||||||| | ||| |||| ||||||||||||||||||| | |||||| ||||| ||||||||    
T  32143491 ttttgtagttatttttcttagagggtcaaaatcgcaacttcataaaagttagggggtgaaaactg 32143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 17248873 - 17248963
Alignment:
Q  15 gggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||| ||||||||||||||| |||| ||| |||| ||||||||||||||| | ||||||  ||||||| ||||||| ||||| |||| ||||    
T  17248873 ggggacggttttgtagtttttttttcttatggggccaaaatcgcaacttcctaaaagtt-aggggcgacaactgctattaagtctttatttt 17248963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 20474935 - 20475010
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    ||||||||| |||||||||||| ||| ||| ||| ||||||||||||||| |  |||||| |||||| |||| ||||    
T  20474935 tagggggcg-ttttgtagttttttttcttaagggatcaaaatcgcaactttgaaaaagttagggggctaaaattgct 20475010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 28204561 - 28204479
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  28204561 tagggggcgattttgtagtttt---ttttagggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 28204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 33329693 - 33329611
Alignment:
Q  16 ggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| | |||||||||||||| |||||||    
T  33329693 ggggcggttttgtagtttttttttcttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

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Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 14856627 - 14856546
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  14856627 ggggcgattttgtagttttttttcttagggagtcaaaatcgcaacttcgtgaaagttagggtgcgaaaactgctattaagcc 14856546  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 51315714 - 51315799
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||||||    
T  51315714 tagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 51315799  T

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Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 17773251 - 17773167
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||||| ||  |||||| | |||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  17773251 ggggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 17773167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 19074552 - 19074468
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||||| ||  |||||| | |||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  19074552 ggggcggttttgtagtttttttccttagggtgccaaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagccttt 19074468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 38958075 - 38958158
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||||||  || ||||||| ||||||||| || |||||||||||| |||||||||||||||| ||||||||    
T  38958075 tagggggcggttttgtagtttt--ttcttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaaactgctattaagcct 38958158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 3193012 - 3193096
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||| |||||||| |||||| ||| |||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||    
T  3193012 taggggtcggttttgaagtttt-tttcttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagcct 3193096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 44586016 - 44586097
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||    
T  44586016 tagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 46226927 - 46226998
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  46226927 cggttttgtagtttt---ttttagggggtcaaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaa 46226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 14349361 - 14349423
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  14349361 ttttttagggggttaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 14349423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 28712692 - 28712777
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||| |||||||||||| ||| |||||||| ||||||| ||||||| | |||||| |||||||||||||||| |||||||||    
T  28712692 tagggggcgattttgtagtttt-tttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgctattaagcctt 28712777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 54464393 - 54464486
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttta 106  Q
    |||||| ||||||||||||||| |||| |||||||| ||| ||||||| |||||||||||| ||| ||| |||||||| ||||||||||||||||    
T  54464393 taggggccggttttgtagtttttttttcttagggggccaatatcgcaaattcgtgaaagttagggagcg-aaactgctattaagcctttctttta 54464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 54719055 - 54718986
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    ||||||||||| ||||||||||||||||||||||||| | || ||||||||||| |||||||||| ||||    
T  54719055 ttttttaggggttcaaaatcgcaacttcgtgaaagttagtggacgaaaactgctattaagcctttttttt 54718986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 14340814 - 14340731
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||||||  ||  ||||||  |||||||| ||||||||||||||| ||||||||||||| || |||||||||    
T  14340814 ggggcggttttgtagtttttattcgtaggggaccaaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaagcctt 14340731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 20432279 - 20432188
Alignment:
Q  8 aagcatagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||| ||||||||  |||||||||||| ||| |||||||  |||| |||||||||||| |||||| |||||| ||||||||| |||||||||    
T  20432279 aagcctagggggcatttttgtagttttttttcttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcctt 20432188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 36677597 - 36677523
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||| | |||||||||||| | ||||||||    
T  36677597 ttttgtagtttt-ttttttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcct 36677523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 36687679 - 36687605
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||| | |||||||||||| | ||||||||    
T  36687679 ttttgtagtttt-ttttttagggagccaaaatcgcaacttcgtgaaagttagcgggcgaaaactgttattaagcct 36687605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 25902588 - 25902669
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||| ||| |||||| | |||||||||||||| | ||||||| |||||| ||||||| | |||||||||    
T  25902588 ggcggttttgtagttttttttcttagggagccaaaatcgcaactttgagaaagttagggggctaaaactgatattaagcctt 25902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 27178223 - 27178141
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||| |||||||||||||| | ||| |||||||| |||| |||||||||||| |||||| |||| ||||||||||| ||||||    
T  27178223 tagggtgcggttttgtagttatttttcttagggggccaaa-tcgcaacttcgtaaaagttaggggacgaaaactgctattaagc 27178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 38178692 - 38178775
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||||||  |||| ||| ||||||||| ||||||||||||| ||| ||||| ||||||||||| ||||||||| ||||| ||||    
T  38178692 gttttgtcattttttttattagggggttaaaatcgcaactttgtgtaagttagggggcgaaaattgctgttaaacctttgtttt 38178775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 86793 - 86879
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||| ||||||||||||  ||| |||| |||||||| ||||||||||||||| |||||||| |||| |||||||| || ||||||||    
T  86793 taggaggcggttttgtatattttttttcttagggggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaagcct 86879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 25154414 - 25154496
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||| ||| ||||| |||||||||| |||||| |  |||||| |||||  ||||||||| ||||||||    
T  25154414 ggggcggttttgtagttttttttcttaggaggtcaaaatcacaactttggtaaagttagggggttaaaactgctattaagcct 25154496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 47189677 - 47189599
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||||| | |||||| ||| |||||||||| | ||||||    
T  47189677 ggggcggttttatagtttt--tttttagggggccaaaatcgcaacttcataaaagttagggagcgaaaactgttattaagc 47189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 12759589 - 12759493
Alignment:
Q  16 ggggcggttttgtagttttgtttt-----ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    ||||||||||||||||||| ||||     ||| |||| ||||||||||| ||| |||||||| |||||| ||||||| | |||||||||| ||||||    
T  12759589 ggggcggttttgtagtttttttttccttcttaaggggccaaaatcgcaatttcttgaaagttagggggcaaaaactgttattaagcctttattttat 12759493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 19404480 - 19404399
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||||| |||||||||||||  || |||| |||  ||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  19404480 tagggggcagttttgtagtttt--ttcttagagggctaaaatcgcaacttcgtgaaagttaggggacgaaaactgttattaagc 19404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 4474304 - 4474378
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||| ||||   |||||||||| ||||||||||||||||| |||||| || || |||||||||| ||||    
T  4474304 gggcggttttgtaatttt---ttttagggggccaaaatcgcaacttcgtaaaagttaggaggagaaaactgctattaa 4474378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 42686567 - 42686517
Alignment:
Q  11 catagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  42686567 cataggggacggttttgtagtttt-tttcttagggggtcaaaatcgcaactt 42686517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 43747358 - 43747277
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||| |||||||||||| ||| |||||||| ||||||||||||||||| ||||||   || ||||||||||| |||| ||||    
T  43747358 gggcgattttgtagtttt-tttcttagggggccaaaatcgcaacttcgtaaaagttataggacgaaaactgctattaaacctt 43747277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 48348303 - 48348257
Alignment:
Q  49 caaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  48348303 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 48348257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 53184758 - 53184831
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||| ||| ||||| ||  |||||||||||||||| |||||| ||| |||||||||||| |||||||    
T  53184758 ttttgtagtttt-tttcttaggtggcaaaaatcgcaacttcgtaaaagttagggagcgaaaactgctattaagcc 53184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 27178377 - 27178458
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||| |||||||||||||| ||||||||  |||||||||| |||||| |  |||||| | |||| ||||||||| ||||    
T  27178377 tagggggtggttttgtagtttttttttttagcaggtcaaaatcacaactttgaaaaagttggagggctaaaactgctattaa 27178458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 44433294 - 44433381
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttaggg-ggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| |||| |||||| || | |||||||||||  |  |||||| |||||| ||||||||| ||||||||    
T  44433294 tagggggcggttttgtagtttttttttcttagggaggccgaaatcgcaactgtggaaaagttagggggctaaaactgctattaagcct 44433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 25248921 - 25248988
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    |||||| |||||||||||  |||||||| || ||||||||||||||||||||| ||   |||||||||||    
T  25248921 gggcggatttgtagtttt--tttttaggaggccaaaatcgcaacttcgtgaaaattaaagggcgaaaact 25248988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 28944203 - 28944280
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||| ||| ||| | || |||||||||||||| || |||||| |||| | ||||||||| ||||||||    
T  28944203 cggttttgtagtttt-tttcttatgaggccaaaatcgcaacttagtaaaagttaggggacaaaaactgctattaagcct 28944280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 38957930 - 38957836
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttta 106  Q
    |||||||||||||||||||||| |||| |||  ||| ||||||||||||||    ||| || || ||| ||||||||| |||||||||| |||||    
T  38957930 tagggggcggttttgtagtttttttttcttaaagggccaaaatcgcaactttaaaaaaattaggaggctaaaactgctattaagcctttttttta 38957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 51453625 - 51453575
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    |||| ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  51453625 taggaggcggttttgtagtttatttagttagggggtcaaaatcgcaacttc 51453575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 53020589 - 53020527
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcg-aaaactgctgttaagcc 97  Q
    ||||||||||| |||||||||||| |||||||||||| | | ||| ||||||||| |||||||    
T  53020589 ttttttaggggatcaaaatcgcaatttcgtgaaagttagagagcgaaaaactgctattaagcc 53020527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 22494632 - 22494588
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  22494632 gggcggttttgtagtttt-tttcttagggggtcaaaatcgtaactt 22494588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 29512627 - 29512558
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    ||||||||||||||| || ||| |||||||  |||||||||||||| |  |||||| |||||| ||||||    
T  29512627 gggcggttttgtagtattttttcttaggggtccaaaatcgcaactttgaaaaagttagggggctaaaact 29512558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 53255044 - 53254963
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||||  ||  |||| ||| ||||||||||||||| |||||  | |||||| ||||||| | |||||||    
T  53255044 ggggcggttttgtagtttatttagttagagggccaaaatcgcaacttcttgaaacatagggggccaaaactgttattaagcc 53254963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 53255258 - 53255339
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||  ||  |||||||| ||||||||||||||| | |||  | || ||| ||||||||| ||||||||    
T  53255258 gggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagcct 53255339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 33329847 - 33329939
Alignment:
Q  13 tagggggcggttttgtagttttgttttt-----tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||| ||||||||||||||| |||||     ||||||| |||||||||||| | | ||||||| |||||  ||||||||| |||| |||||    
T  33329847 taggggacggttttgtagttttttttttcttcttagggggccaaaatcgcaacgttgggaaagttggggggttaaaactgctattaaaccttt 33329939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 54476129 - 54476077
Alignment:
Q  11 catagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    |||||||||| |||||||| |||  ||  ||||||||||||||||||||||||    
T  54476129 catagggggctgttttgtattttaattagttagggggtcaaaatcgcaacttc 54476077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 3999159 - 3999083
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  3999159 ttttgtagtttt-tttcttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 3999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 12406125 - 12406040
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||||||    
T  12406125 tagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 12406040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 35877510 - 35877592
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||| ||||| |||||||||| ||||||    
T  35877510 tagggggcggttttgtagttttttttcttagggg-tcaaaattgcaacctcgtgaaagttagggggtgaaaactgctattaagc 35877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 2974863 - 2974949
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| ||||||||| |||  || ||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  2974863 tagggggcggttctgtagttttttttccttggggggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcct 2974949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 3333768 - 3333695
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  3333768 cggttttgtagtttt-tttcttaggggatcaaaatcgcaacttcatgaaagttagggggcgaaaactgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 36798406 - 36798492
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||| |||||| ||| |||||||  |||||||||||||| | ||||||| |||||| ||||||||| |||||||||    
T  36798406 tagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaaaactgctattaagcctt 36798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 43098107 - 43098025
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||| |||||| |||| ||||||||||| |||| |||||    
T  43098107 ggcggttttgtagttttttttcttacgggatcaaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaaaccttt 43098025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 37897950 - 37898034
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||| |  |||||| |||||| ||||||||| ||||| ||||    
T  37897950 ggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaaggcttt 37898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 20629821 - 20629739
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||  ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||  ||||||||||||||| ||||    
T  20629821 tagggggttgttttgtagtttttttttcttagggggttaaaatcgcaactttgtgaaagttaaggggcgaaaactgctattaa 20629739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 25364057 - 25364136
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||||||   ||||||||||| |||||| ||||||||||||||||| | ||| |||||||||| ||||    
T  25364057 tagggggcggttttgtagtttc--tttttagggggccaaaattgcaacttcgtgaaagttagagggtgaaaactgctattaa 25364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 25910956 - 25911037
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    |||||||| ||||||||||||| ||| |||| |||  |||||| |||||||||||||||| |||||||||||||||| |||||    
T  25910956 tagggggcagttttgtagtttt-tttcttagagggctaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaag 25911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 35166523 - 35166608
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagtt-cgggggcgaaaactgctgttaagcct 98  Q
    ||||||| | |||||||||||| ||| |||||||  ||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  35166523 tagggggtgattttgtagtttt-tttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcgaaaactgctattaagcct 35166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 6464305 - 6464390
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||  ||  |||||||| ||||||||||||||| |||||  | |||||| ||||||||| ||||||||    
T  6464305 tagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 6464390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 27904713 - 27904798
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| ||| |||| |||||||||||||| |  |||||| | |||| ||||||||| ||||||||    
T  27904713 tagggggcggttttgtagttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcct 27904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 40276259 - 40276347
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||||||| || | ||||||| |||||  ||||||||| ||||||||||    
T  40276259 taggggacggttttgtagtttttttttcttagggggttaaaatcgcaaatttgggaaagttagggggataaaactgctattaagccttt 40276347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 20126522 - 20126427
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttatc 108  Q
    |||||||||||||||||||||  ||  |||||||||||||||| ||||||| |||||  | |||||| |||||| || |||||||| | |||||||    
T  20126522 tagggggcggttttgtagtttatttagttagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagcctattttttatc 20126427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 32391802 - 32391720
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||| | |||||||||||| ||| ||| |||| ||||||| ||||||||||||||||  ||||||||||||||| ||||||    
T  32391802 tagggggtgattttgtagtttt-tttcttaaggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagc 32391720  T

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Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 34320041 - 34319959
Alignment:
Q  15 gggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||| |||||||||||||| ||| |||||||| |||||||||||||||  |||||||  ||||||||||||||| ||| ||||    
T  34320041 gggggtggttttgtagttttttttcttagggggccaaaatcgcaacttcaagaaagtt-aggggcgaaaactgctattatgcct 34319959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 39574322 - 39574240
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||| | |||| ||||||| ||| |||||| | |||||||||||||||||||||||| | |||||||||||||| ||||||    
T  39574322 tagggggtgattttatagtttt-tttcttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 20512433 - 20512515
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||| ||||||| |||| |||| |  |||| ||||||||||||||||||||||||  | ||||||||||||| |||||||||    
T  20512433 gggcgattttgtaatttttttttcttaggggccaaaatcgcaacttcgtgaaagttaagaggcgaaaactgctattaagcctt 20512515  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 16132959 - 16133047
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||  |||||||||| | |||| ||||||||  ||||||||||||||||||||||| || |||||||||  || ||||||||||    
T  16132959 tagggggcaattttgtagttcttttttcttagggggctaaaatcgcaacttcgtgaaagttgggaggcgaaaaccactattaagccttt 16133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 24405731 - 24405814
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||| ||||||||||||| ||| |||||| | ||||||||||| |||||||  ||| ||| ||| |||||||| ||||||||||    
T  24405731 gggcagttttgtagttttttttcttagggtgccaaaatcgcaagttcgtgattgttagggtgcggaaactgctattaagccttt 24405814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 3333937 - 3334015
Alignment:
Q  19 gcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||  || |||||||| |||||||||||||| |  |||||| |||||| |||||| || |||||||    
T  3333937 gcggttttgtagtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 20126648 - 20126698
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    |||||||||||||||||||||  ||  ||||||||||||||||||||||||    
T  20126648 tagggggcggttttgtagtttatttagttagggggtcaaaatcgcaacttc 20126698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 31080560 - 31080487
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactg 87  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||||||| |  |||||| | |||| |||||||    
T  31080560 tagggggtggttttgtagtttt-ttttttaggaggtcaaaatcgcaactttggaaaagttagagggctaaaactg 31080487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 42586043 - 42585985
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||||| |||||  | |||||| ||||||||| ||||||||    
T  42586043 ttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 42585985  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 18403247 - 18403306
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||| ||||||||||||| | |||||||| || ||||||||||||| ||||||||||    
T  18403247 ttagggggccaaaatcgcaact-catgaaagttaggtggcgaaaactgctattaagccttt 18403306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24405569 - 24405493
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||||||| ||| | |||| |||||||||||||||| |  |||||| |||| | ||||||||| ||||    
T  24405569 ggcggttttgtagttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 24405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 36798255 - 36798167
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||| |||||||||||||| |||| |||||||| |||||| ||||||| |  ||||||  ||| | ||||||||| ||||||||||    
T  36798255 tagggggtggttttgtagtttttttttcttagggggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagccttt 36798167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 19340825 - 19340762
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||||||||||| || |  |||||| |||||| ||||||||| |||| ||||    
T  19340825 ttttttagggggtcaaaatcgcaattttggaaaagttagggggctaaaactgctattaaacctt 19340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 20629974 - 20630057
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcggg-ggcgaaaactgctgttaag 95  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||| |||||| |  |||||| ||| ||| ||||||||| |||||    
T  20629974 tagggggcggttttgtagttttttttcttaaggggccaaaatcacaactttggaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 40276102 - 40276015
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||| || ||||||| |||| ||| |||| |||  ||||||||||||||  ||||||| |||| ||||||||| | ||||||||||    
T  40276102 taggggacgattttgtaattttttttcttagagggctaaaatcgcaacttcacgaaagttaggggccgaaaactgatattaagccttt 40276015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 12406270 - 12406356
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||||||||||| ||||| |||| |  |||| ||||||| |||||| |  |||||| |||||| |||| |||| |||||||||    
T  12406270 tagggggcggttttgttgtttttttttcttaggggccaaaatctcaactttgaaaaagttagggggctaaaattgctattaagcctt 12406356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 19131730 - 19131777
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||||||||||||||||  ||||||||||||  |||||||||||||    
T  19131730 tagggggcggttttgtagttt--ttttttagggggcaaaaatcgcaactt 19131777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 20364739 - 20364681
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||||| ||| | || |||||  ||||||||| ||||||||    
T  20364739 ttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagcct 20364681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 24242074 - 24242016
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||| ||| ||||||||| |||||  |||||||| ||| |||||    
T  24242074 ttagggggtcaaaatcgcacctttgtgaaagttagggggtcaaaactgcagtttagcct 24242016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 32391952 - 32391998
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    ||||||||||||||||||| ||| ||||||||  |||||||||||||    
T  32391952 ggggcggttttgtagttttttttcttagggggctaaaatcgcaactt 32391998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 35166379 - 35166334
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaa 59  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  35166379 tagggggcgattttgtagtttt-tttcttagggggtcaaaatcgcaa 35166334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 26702646 - 26702707
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    ||||| ||||||||||||| ||| ||| || | ||||||||||||||||| |||||| ||||    
T  26702646 ggggcagttttgtagttttttttcttaaggagccaaaatcgcaacttcgtaaaagttagggg 26702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 26972379 - 26972440
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    ||||| ||||||||||||| ||| ||| || | ||||||||||||||||| |||||| ||||    
T  26972379 ggggcagttttgtagttttttttcttaaggagccaaaatcgcaacttcgtaaaagttagggg 26972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 36361117 - 36361032
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| |||  ||  ||||||| |||||||||||||||| |||||  | |||| | ||||||||  ||||||||    
T  36361117 tagggggcggttttgtactttatttagttaggggatcaaaatcgcaacttcttgaaacataggggaccaaaactgcaattaagcct 36361032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22471924 - 22471976
Alignment:
Q  11 catagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    |||||||||| |||||||| |||  ||  ||||||||||||||||||||||||    
T  22471924 catagggggctgttttgtattttaattacttagggggtcaaaatcgcaacttc 22471976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 43355802 - 43355746
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    ||||||| |||||||||||||  || ||||| || |||||||||||||||| |||||    
T  43355802 tagggggtggttttgtagtttatttatttagaggatcaaaatcgcaacttcttgaaa 43355746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 35393899 - 35393984
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| |||| ||  |||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  35393899 tagggggcggttttgtagttttttttcttagaggtccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcct 35393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 35383843 - 35383763
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||| ||||||||||||   |||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  35383843 ggggcgattttgtagtttt---ttttagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcctt 35383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 21957621 - 21957536
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| | ||||||| ||| || ||||||| | ||||||||||    
T  21957621 tagggggcggttttgtagtttt--tttttagggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaagccttt 21957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 50769598 - 50769675
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  50769598 ggcggttttatagtttt--tttttagggggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgcttttaagcc 50769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 49185792 - 49185870
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  49185792 ggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtt-gggggtgaaaactgctattaag 49185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 53312525 - 53312602
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||| |||||||| | ||||||||||    
T  53312525 gttttgtagtttt-tttcttagtgggtcaaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagccttt 53312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 14449348 - 14449276
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||| | ||| |||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||    
T  14449348 gttttgtagttgtttttcttagggggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 14449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 49185654 - 49185571
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||||  ||||||||| |||||||    
T  49185654 tagggggcggttttgtagttttttttcttagggggccaaaatcgcaactt-gggaaagttagggggttaaaactgctattaagcc 49185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 23759644 - 23759558
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||| ||||||||||||||| ||| ||| |||| ||||||||||||||  |||||||| ||||||||||||| || ||||||||||    
T  23759644 taggggacggttttgtagtttt-tttcttaaggggccaaaatcgcaactttatgaaagttagggggcgaaaactactattaagccttt 23759558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 1420618 - 1420537
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||| |  |||||| |||||| ||||||||| |||||    
T  1420618 tagggggcggttttgtagtttt-ttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

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Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 53924830 - 53924746
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||| |||||||||| |||| ||| ||| |||||||||||| |||||||||||||||| |||||||| |||| || ||||||||    
T  53924830 taggggacggttttgtaatttt-tttcttaaggggtcaaaatcacaacttcgtgaaagttagggggcgagaactactattaagcct 53924746  T

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Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 43074669 - 43074613
Alignment:
Q  44 ggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  43074669 ggggccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagccttt 43074613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 50769445 - 50769366
Alignment:
Q  16 ggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||| |||||  ||||||||| ||||    
T  50769445 ggggcggttttgtagtttttttttcttaggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 2837130 - 2837204
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    |||||||||||||||||| ||| |||| |||||||| |||||| |||||||| ||||||||  ||||||||||||    
T  2837130 tagggggcggttttgtagcttttttttcttagggggccaaaattgcaacttcttgaaagttaaggggcgaaaact 2837204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 12719675 - 12719769
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttta 106  Q
    ||||||| |||||||||||||| |||| |||||||| ||||||  |||||| | ||||||| |||||  ||||||||| |||||||||| |||||    
T  12719675 tagggggtggttttgtagtttttttttcttagggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagcctttttttta 12719769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 14060843 - 14060764
Alignment:
Q  8 aagcatagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||||||||| |  |||||| |||||  |||||||||    
T  14060843 aagcttagggggcggttttgtagtttt--ttcttagggggtcaaaatcgcaactttgaaaaagttagggggttaaaactgct 14060764  T

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Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 25909571 - 25909486
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||| |||||| |  |||||| |||||  ||||||||| ||||||||    
T  25909571 tagggggcggttttatagttttttttcttagggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 37831676 - 37831595
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||  ||| ||| |||||||| ||||||||||||||| | ||| || |||||| ||||||||| ||||    
T  37831676 tagggggcggttttgtaagtttttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 21871617 - 21871696
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||| |  |||||| |||||| |||| |||| |||||    
T  21871617 taggaggcggttttgtagtttt---ttttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 21927478 - 21927557
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||| |  |||||| |||||| |||| |||| |||||    
T  21927478 taggaggcggttttgtagtttt---ttttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 8965601 - 8965533
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    |||||||||||||||||||  |||||||||||  |||||| ||||||||| |||||  |||||||||||||    
T  8965601 ggggcggttttgtagtttt--tttttagggggctaaaatcacaacttcgtaaaagtaagggggcgaaaact 8965533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16292498 - 16292568
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaa 84  Q
    |||||| || |||||||||||| |||| | | |||| ||||||||||||||||||||||| |||||||||||    
T  16292498 taggggacgattttgtagtttttttttct-gagggtaaaaatcgcaacttcgtgaaagttagggggcgaaaa 16292568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 51371701 - 51371779
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||| ||||| ||||| | |||  |||||||||||||||| ||||||| ||||||||||||| || |||||||||    
T  51371701 cggttttgttgtttt-tttttaaagggaccaaaatcgcaacttcgagaaagttagggggcgaaaactactattaagcctt 51371779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 1420777 - 1420859
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| | ||| |||||||  |||||||| ||||| | |||||||  ||||| ||||||||| ||||||||    
T  1420777 ggggcggttttgtagttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcct 1420859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 19909255 - 19909170
Alignment:
Q  14 agggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    ||||| |||||||||||||||  || |||||||  |||||||||||||| | ||||||| |||||  ||||||||| ||||||||||    
T  19909255 aggggtcggttttgtagtttttcttcttaggggc-caaaatcgcaactttgagaaagttagggggttaaaactgctattaagccttt 19909170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 27978929 - 27979018
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttt 105  Q
    |||||| |||||||||||||||   |||||  ||| ||||||||||||||||| |||||| ||||||||||| || | |||||| ||| ||||    
T  27978929 taggggacggttttgtagtttt---ttttaaagggccaaaatcgcaacttcgttaaagttagggggcgaaaaatgttattaagcttttttttt 27979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 29697752 - 29697837
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||| ||| ||||||||||| ||| ||||||   ||||||||||||||| |||||||| || || |||||||||| |||||||||    
T  29697752 taggggacgggtttgtagttttttttcttagggac-caaaatcgcaacttcatgaaagttaggaggtgaaaactgctattaagcctt 29697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 53312371 - 53312285
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||| |||||||||||||  |||| |||||||| |||||||||||||| |  |||||| |||||| |||| |||| ||||||||    
T  53312371 tagggggtggttttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcct 53312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 2654030 - 2653953
Alignment:
Q  21 ggttttgtagttttgtttttta-gggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||| | | ||| ||||| ||||||||||||||||| |||||| || ||| ||||||||| |||||||    
T  2654030 ggttttgtagttttttatcttaagggggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 2836983 - 2836898
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||| ||| || ||||| |||||||||| ||| |  |||||| |||||  ||||||| | ||||||||    
T  2836983 tagggggcggttttgtagttttttttctttgggggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcct 2836898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 6207257 - 6207176
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||| ||||||||||||| ||| ||||| |  ||||||| ||||||||  |||||| ||| |||||||||||| |||||||    
T  6207257 ggggcagttttgtagttttttttcttaggagtccaaaatcacaacttcgctaaagttagggagcgaaaactgctattaagcc 6207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 44356628 - 44356711
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| |||| ||| ||||| || |||||||||||||| | |||||||  ||||| ||||||||| ||||||||    
T  44356628 tagggggcggttttgtaatttt-tttcttaggcggccaaaatcgcaactttgagaaagtt-aggggctaaaactgctattaagcct 44356711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21957697 - 21957780
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||| ||||||||||||||||| |||| |  | || |||||||||||||| |  |||||| |||||| ||||||||| ||||||    
T  21957697 taggaggcggttttgtagtttttttttcttagaggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 35615398 - 35615315
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||| ||| ||||||||||||| |  ||||||||| ||||||||||||||    |||||| |||||| ||||||||| ||||||    
T  35615398 taggaggcagttttgtagttttttcctttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 49804331 - 49804382
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    |||||||||||| |||  ||||||||||| |||||||||||||||| |||||    
T  49804331 ggcggttttgtattttatttttttaggggatcaaaatcgcaacttcttgaaa 49804382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 2016875 - 2016789
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||||| |||||||||| || ||| || | ||| |||||||||||||| |  |||||| |||||| ||||||||| | |||||||    
T  2016875 tagggggcagttttgtagtcttttttctttgagggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcctt 2016789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 4411493 - 4411543
Alignment:
Q  50 aaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||| || |||||||||||||| | |||| |||||    
T  4411493 aaaatcgcaacttcgtgaaaattagggggcgaaaactgttattaaaccttt 4411543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 6614921 - 6614846
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||  || ||| || | ||||||||||||||||||||||||  ||| |||||| |||| ||||||||    
T  6614921 ggttttgtagtttt--ttcttaaggagccaaaatcgcaacttcgtgaaagttaagggtcgaaaaatgctattaagcct 6614846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 11824464 - 11824513
Alignment:
Q  49 caaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| |||||| ||||||| |||||| | ||||||||    
T  11824464 caaaatcgcaacttcgtaaaagttagggggcggaaactgttattaagcct 11824513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 37832944 - 37833013
Alignment:
Q  30 gttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||| ||| ||||||| |||||||||||||||   ||||||| || ||| ||||||||| |||||||||    
T  37832944 gttttttttcttaggggttcaaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcctt 37833013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 43074827 - 43074880
Alignment:
Q  44 ggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||||| | ||||||| |||||| |||| |||| |||||||    
T  43074827 ggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 3369904 - 3369844
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||| ||||||||||||||| ||| | || |||||| ||||||| | ||||||||||    
T  3369904 ttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagccttt 3369844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 6637142 - 6637075
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgc 88  Q
    |||||||||| |||| ||| |||||||  |||||||||||| |||||||||||  ||||| ||||||||    
T  6637142 cggttttgtaatttt-tttcttaggggaccaaaatcgcaacatcgtgaaagttaaggggcaaaaactgc 6637075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 8070894 - 8070926
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaa 68  Q
    |||||||||||||||||||| ||||||||||||    
T  8070894 ttttttagggggtcaaaatcacaacttcgtgaa 8070926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 10059767 - 10059679
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||| |||| |||||||| |||||||  || |||  |||| ||  |||||||||||| || |||| |||||    
T  10059767 tagggggcggttttgtagtttttttttcttagggggccaaaatcataatttcaagaaaattaaggggcgaaaactactattaaaccttt 10059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 14016806 - 14016722
Alignment:
Q  16 ggggcggttttgtagttttgtttttt-----agggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaag 95  Q
    ||||||||||||||||||| ||||||     ||| || |||||||||||||| | ||||||| |||||| ||||| ||| |||||    
T  14016806 ggggcggttttgtagtttttttttttttcttaggaggccaaaatcgcaactttgggaaagttagggggctaaaaccgctattaag 14016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 27978766 - 27978695
Alignment:
Q  22 gttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||| |||| ||| ||||||||||||||||||||||| | ||||||| | ||||  |||||||| ||||    
T  27978766 gttttgtaatttt-tttcttagggggtcaaaatcgcaactttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 51362623 - 51362533
Alignment:
Q  13 tagggggcggttttgtagttttgt---tttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||||||| |   || |||||||| ||||||||||||||    |||||| |||||| |||||| || |||| |||||    
T  51362623 tagggggcggttttgtagttttttttcttcttagggggccaaaatcgcaactttagaaaagttagggggctaaaactactattaaaccttt 51362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 51362776 - 51362851
Alignment:
Q  21 ggttttgtagttttgttttt--tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||| |||||  || ||| |||||||| |||||| || |||||| |||| ||||||||||| ||||    
T  51362776 ggttttgtagttttttttttcttaagggatcaaaatcacaactttgtaaaagttaggggacgaaaactgctattaa 51362851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 54983908 - 54983849
Alignment:
Q  36 ttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||||||||| |||| ||||| |||||| |||||| |||| ||||||||||| ||||||    
T  54983908 ttttttagggggccaaa-tcgcatcttcgtaaaagttaggggacgaaaactgctattaagc 54983849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 34679323 - 34679404
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||||||||||||||||   |||||||||| ||||||| |||||||||||||||| |||||| ||||||||| |||||||    
T  34679323 tagggggcggttttgtagtttt---ttttagggggccaaaatcacaacttcgtgaaagttagggggcaaaaactgctattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 15023069 - 15023152
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||| ||||||||||||||| ||| |||||||||||||||| ||||||| |||||||| |||||| ||||||||| |||||||    
T  15023069 taggggacggttttgtagtttt-tttcttagggggtcaaaatcacaacttcttgaaagttagggggccaaaactgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 16043250 - 16043339
Alignment:
Q  11 catagggggcggttttgtagttttgtttttt---agggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||| |||||||||  || ||   |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  16043250 catagggggcggttctgtagtttttcttcttcttagggggccaaaatcgtaacttcgtgaaagttagggggcgaaaactgctgttaagcc 16043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 37431771 - 37431853
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||||| ||| ||||| || |||||||||||||||||| ||||| |||||||||||||||| |||| ||||    
T  37431771 ggggcggttttgtagtttt-tttcttaggaggccaaaatcgcaacttcgtggaagttagggggcgaaaactgctattaaacctt 37431853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 6592964 - 6593047
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||| |||||||||||||  |||| ||||||  ||||||||||||||||||||||| || |||||||||| |||||||||||    
T  6592964 tagggggcagttttgtagtttt--ttttaagggggctaaaatcgcaacttcgtgaaagttaggtggcgaaaactactgttaagcct 6593047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 19206224 - 19206141
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||| ||||||||||||||  ||||||||||| |||||||||||||| |||||| || ||||||||||| |||| ||||||||    
T  19206224 tagggggtggttttgtagtttt--tttttagggggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaagcct 19206141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 14489442 - 14489525
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||| | |||||||||||| ||| |||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  14489442 tagggggtgattttgtagtttt-tttcttaggggc-caaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcct 14489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 32969755 - 32969842
Alignment:
Q  13 tagggggcggttttgta-gttttgtttttt-agggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||| ||||| |||||| ||||||  ||||||| |||| |||||||||| |||||||||||||||| ||||||||    
T  32969755 tagggggcggttttgtaagtttttttttttcagggggctaaaatcgaaactccgtgaaagttagggggcgaaaactgctattaagcct 32969842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 43029024 - 43029083
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagtt 72  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||    
T  43029024 tagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtt 43029083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 5362251 - 5362174
Alignment:
Q  21 ggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||| ||| ||| |||| |||||||||||||| ||||||||| ||||||||||| | || ||||||||    
T  5362251 ggttttgtagttttttttcttatggggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaagcct 5362174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 6510230 - 6510310
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||||||||||||| ||| ||| |||||| | ||||||||||||||| |||||||| | |||||||||||||| ||||    
T  6510230 tagggggcggttttgtagcttt-tttcttagggtgccaaaatcgcaacttcatgaaagttagagggcgaaaactgctattaa 6510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 14816027 - 14816112
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||||  ||  |||||||| ||||||||||||||| |||||  | |||||| ||||||||| ||||||||    
T  14816027 tagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcct 14816112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 34761090 - 34761171
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||| ||||||||||||||| | ||| ||| || || ||||||||||||||||||||||| |||| ||||||||||| ||||    
T  34761090 taggtggcggttttgtagttctttttcttaaggagttaaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaa 34761171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 43028875 - 43028790
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttc 101  Q
    |||| |||||||||||||| ||| |||||||| |||||||||||||| |   ||||| |||||| ||||||||| |||||||||||    
T  43028875 gggggggttttgtagttttttttcttagggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcctttc 43028790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 25333730 - 25333809
Alignment:
Q  18 ggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagccttt 100  Q
    |||||||||||||||||   |||||||||||||||||||||| ||||| |||||| | |||||||||||  | ||||||||||    
T  25333730 ggcggttttgtagtttt---ttttagggggtcaaaatcgcaatttcgttaaagttagagggcgaaaactattattaagccttt 25333809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 5470570 - 5470650
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||   ||||||| |||||| ||||||||| | ||||||    
T  5470570 ggggcggttttgtagtttt--tttttagggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagcct 5470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 37803364 - 37803446
Alignment:
Q  17 gggcggttttgtagttttgttttt--tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||||| |||||||| |||||  |||| |||||||||||||||||||| |||||| ||||||||||| || | |||||||    
T  37803364 gggcggtttcgtagttttttttttcttaggaggtcaaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaagcc 37803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 18709328 - 18709247
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||| | ||||||||||||   ||||||| || |||||||| ||||||||||||||| |||| ||||||||||| |||||||    
T  18709328 tagggggtgattttgtagtttt---ttttaggaggccaaaatcgaaacttcgtgaaagttaggggacgaaaactgctattaagcc 18709247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 35718886 - 35718971
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    |||||| ||||||||||||||| ||| ||||| | |||| |||||||||||||||||||| || |||| |||||||| |||| ||||    
T  35718886 taggggacggttttgtagtttt-tttcttaggagatcaagatcgcaacttcgtgaaagttaggaggcggaaactgctattaaacctt 35718971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 36177062 - 36176981
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||||| ||||||||||||||   ||||||||||  |||||||||||||||||||| || | |||| ||||||||| |||||||    
T  36177062 tagggggtggttttgtagtttt---ttttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 34679178 - 34679095
Alignment:
Q  15 gggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||| |||| ||| ||||| || |||||||||||||| |  |||||| |||||| ||||||||| |||||||||    
T  34679178 gggggcggttttgtaatttt-tttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcctt 34679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 39918514 - 39918434
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||| ||||| |||||| ||| |||||||| |||||||||||||| | ||||||| |||||| |||||| || |||||||    
T  39918514 gggcgattttgcagttttttttcttagggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 6592781 - 6592723
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||||||||||||||||||||| |  |||||| |||||| ||||||||| ||||||||    
T  6592781 ttagggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 6592723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 14943612 - 14943549
Alignment:
Q  19 gcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaa 84  Q
    ||||||||||||||||  || |||||| ||||||||| |||||||||||||||| |||||| ||||    
T  14943612 gcggttttgtagtttt--ttcttagggtgtcaaaatcacaacttcgtgaaagttagggggcaaaaa 14943549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 14489297 - 14489205
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttctttta 106  Q
    ||||||||||||||||| |||| ||| ||| |||| ||||||| ||||||   ||||||| | |||| ||||||||| |||||||||| |||||    
T  14489297 tagggggcggttttgtaatttt-tttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcctttatttta 14489205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 31827788 - 31827845
Alignment:
Q  40 ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    ||||| ||||| |||||||||||||| |||||| ||||||||||| |||| |||||||    
T  31827788 ttaggaggtcataatcgcaacttcgtaaaagttagggggcgaaaattgctattaagcc 31827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 4925679 - 4925737
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggg 77  Q
    |||||| ||||||||||||   ||||||| || |||||||||||||||||||||||| ||||    
T  4925679 ggggcgattttgtagtttt---ttttaggaggccaaaatcgcaacttcgtgaaagttagggg 4925737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 5470411 - 5470333
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||||| |||||||||||||   |||||| || | |||||||||||||||||||| |  |||| ||||||||||| ||||    
T  5470411 tagggggcagttttgtagtttt---ttttagaggataaaaatcgcaacttcgtgaaaataaggggacgaaaactgctattaa 5470333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 12948968 - 12948892
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    |||||| |||| |||||||  ||||||||| ||||||||||||||||| | ||| || |||||| ||||||||| ||||    
T  12948968 ggggcgattttatagtttt--tttttagggtgtcaaaatcgcaacttcttaaaatttagggggctaaaactgctattaa 12948892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 35173041 - 35173092
Alignment:
Q  11 catagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||||| |||||||| |||  ||| |||||||||||||||||||||||    
T  35173041 catagggggctgttttgtattttaatttgttagggggtcaaaatcgcaactt 35173092  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 44617969 - 44618053
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||| ||||  || ||| |||  ||||||||||||||| |||||||| | |||  ||||||||| |||||||||    
T  44617969 tagggggcggttttgtaatttt--ttcttaagggaccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcctt 44618053  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 16043174 - 16043124
Alignment:
Q  12 atagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||    
T  16043174 ataggggacggttttgtagttttttttcttagggggccaaaaccgcaactt 16043124  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 18224992 - 18225033
Alignment:
Q  44 ggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  18224992 ggggtcaaaatcgcaacttcgtaaaagtt-gggggcgaaaact 18225033  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 27489666 - 27489724
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaag 70  Q
    ||||| || ||||||||||||| |||| ||||| || ||||||||||||||||||||||    
T  27489666 tagggagcagttttgtagtttttttttcttaggaggccaaaatcgcaacttcgtgaaag 27489724  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 35500124 - 35500038
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctt 99  Q
    ||||||||||||||||| |||  ||| |||| ||||| ||||| ||||||  |||||  | |||||| ||||||||| |||||||||    
T  35500124 tagggggcggttttgtattttattttgttagtgggtcgaaatcacaactttttgaaacatagggggccaaaactgctattaagcctt 35500038  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 44297645 - 44297598
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    |||||||| |||||||||||||  ||||||||||| ||||||||||||||    
T  44297645 tagggggcagttttgtagtttt--tttttagggggccaaaatcgcaactt 44297598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 35500324 - 35500377
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    |||||||||||||| |||  ||| |||||||| ||||||||||||||| |||||    
T  35500324 ggggcggttttgtattttattttgttagggggccaaaatcgcaacttcttgaaa 35500377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 8740422 - 8740474
Alignment:
Q  17 gggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaa 69  Q
    |||||||||||||||||  ||  ||| |||||||||||||||||||| |||||    
T  8740422 gggcggttttgtagtttatttagttaaggggtcaaaatcgcaacttcttgaaa 8740474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 14815782 - 14815698
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||||||||||  ||  ||| |||  ||||| ||||||||| |||||  | |||||| ||||||||| |||||||    
T  14815782 tagggggcggttttgtagtttatttagttaagggaccaaaaccgcaacttcttgaaacatagggggccaaaactgctattaagcc 14815698  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 28851674 - 28851730
Alignment:
Q  41 tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcc 97  Q
    |||||||||||||||||||| | ||||||||| |||||  |||||||| ||| ||||    
T  28851674 tagggggtcaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcc 28851730  T

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Target: scaffold1458 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 1545 - 1470
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| ||| |||||||| ||||||| |||||| ||||||||| |||||| ||||||||| ||||||||    
T  1545 ttttgtagttttttttcttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcct 1470  T

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Target: scaffold0515 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 3713 - 3638
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||||||    
T  3713 ttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

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Target: scaffold0417 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 9566 - 9661
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttttat 107  Q
    ||||||||| ||| |||||||| |||| ||||||| ||||||||||||||||||||||||| || || |||||||||| |||| ||| | ||||||    
T  9566 tagggggcgatttggtagtttttttttcttaggggatcaaaatcgcaacttcgtgaaagttaggaggtgaaaactgctattaaacctatattttat 9661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 3713 - 3638
Alignment:
Q  23 ttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||||| ||||||||| ||||||||    
T  3713 ttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 642 - 716
Alignment:
Q  16 ggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgct 89  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||| || | |||||||||||    
T  642 ggggcggttttgtagtttttttttcttagggggccaaaatcgcaacttcgtaaaagttaggagacgaaaactgct 716  T

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Target: scaffold0248; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 487 - 405
Alignment:
Q  13 tagggggcggttttgtagttttgtttt-ttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaa 94  Q
    ||||||| |||||||||||||| |||| |||||||| |||||||||||||| | | ||||| |||||| ||| ||||| ||||    
T  487 tagggggtggttttgtagtttttttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaa 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 19123 - 19033
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcctttcttt 104  Q
    |||||| ||||||||||||||| ||| |||||| | | ||||| ||||||||||||||||  |||||||||||| || |||||||| |||||    
T  19123 taggggacggttttgtagtttt-tttcttagggagccgaaatcacaacttcgtgaaagttaaggggcgaaaactactattaagcctatcttt 19033  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 94039 - 94082
Alignment:
Q  20 cggttttgtagttttgttttttagggggtcaaaatcgcaacttc 63  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  94039 cggttttgtagttttttttcttagggggtcaaaatcgcaacttc 94082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 37837 - 37783
Alignment:
Q  44 ggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||| ||| | || |||||| ||||||||||||||||||    
T  37837 ggggtcaaaatcgcaacttcctgatacttagggggctaaaactgctgttaagcct 37783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 145434 - 145364
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaact 86  Q
    ||||||| ||||||||||| ||| |||||||| |||||||||||||| | ||||||| |||| | ||||||    
T  145434 ggggcggctttgtagttttttttcttaggggggcaaaatcgcaactttgagaaagttaggggactaaaact 145364  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 405427 - 405508
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    ||||| |||||||| |||| ||| |||||||||||||||||||||||| ||||| || ||| |  ||||||||| ||||||||    
T  405427 ggggcagttttgtatttttttttcttagggggtcaaaatcgcaacttcttgaaactt-gggagttaaaactgctattaagcct 405508  T

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Target: scaffold0735 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 6118 - 6061
Alignment:
Q  39 tttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    ||||||||||||||||| |||||||||||||||| | |||| |||||| || ||||||    
T  6118 tttagggggtcaaaatcacaacttcgtgaaagttagagggcaaaaactactattaagc 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 9654 - 9731
Alignment:
Q  16 ggggcggttttgtagttttgttttttagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagcct 98  Q
    |||||||||||||||||||   ||||| |||| || |||| ||||||||||||||||   |||||||||| ||| ||||||||    
T  9654 ggggcggttttgtagtttt---ttttatggggccagaatcacaacttcgtgaaagtt--agggcgaaaacggctattaagcct 9731  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9766 - 9815
Alignment:
Q  13 tagggggcggttttgtagttttgttttttagggggtcaaaatcgcaactt 62  Q
    ||||||||| |||| ||||||| ||| |||||||||||||||| ||||||    
T  9766 tagggggcgattttatagttttttttcttagggggtcaaaatcacaactt 9815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3657 - 3573
Alignment:
Q  13 tagggggcggttttgtagttttgttttt-tagggggtcaaaatcgcaacttcgtgaaagttcgggggcgaaaactgctgttaagc 96  Q
    |||||| ||||||| ||||||| ||||| |||  || |||||||| ||||| ||||||||| |  ||||||||||||| ||||||    
T  3657 taggggacggttttatagttttttttttctagtaggccaaaatcgtaactttgtgaaagttagaaggcgaaaactgctattaagc 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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