View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4603_low_2 (Length: 510)

Name: NF4603_low_2
Description: NF4603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4603_low_2
NF4603_low_2
[»] chr2 (11 HSPs)
chr2 (17-500)||(40077369-40077852)
chr2 (300-475)||(40059570-40059745)
chr2 (307-496)||(40085464-40085653)
chr2 (77-159)||(38259605-38259687)
chr2 (78-159)||(3973612-3973693)
chr2 (77-135)||(22878192-22878250)
chr2 (78-159)||(15377836-15377916)
chr2 (18-51)||(40085237-40085270)
chr2 (78-122)||(1830146-1830190)
chr2 (77-121)||(18525159-18525203)
chr2 (76-160)||(41905833-41905917)
[»] chr4 (7 HSPs)
chr4 (383-468)||(22015825-22015910)
chr4 (78-159)||(6428088-6428169)
chr4 (76-138)||(2811562-2811624)
chr4 (85-159)||(18628479-18628553)
chr4 (90-159)||(2996643-2996712)
chr4 (78-118)||(1133039-1133079)
chr4 (78-122)||(25717700-25717744)
[»] chr8 (3 HSPs)
chr8 (78-130)||(11059648-11059700)
chr8 (78-122)||(7008705-7008749)
chr8 (78-138)||(14926901-14926961)
[»] chr3 (5 HSPs)
chr3 (78-159)||(50211805-50211886)
chr3 (83-153)||(11040538-11040608)
chr3 (85-138)||(22667494-22667547)
chr3 (85-138)||(22724133-22724186)
chr3 (78-122)||(30657393-30657437)
[»] chr1 (3 HSPs)
chr1 (78-122)||(6292599-6292643)
chr1 (78-122)||(12564418-12564462)
chr1 (78-138)||(27807206-27807266)
[»] chr7 (7 HSPs)
chr7 (79-122)||(7513666-7513709)
chr7 (78-117)||(19302482-19302521)
chr7 (84-159)||(25670511-25670586)
chr7 (73-122)||(1418526-1418575)
chr7 (78-115)||(34036031-34036068)
chr7 (78-118)||(30748953-30748993)
chr7 (18-50)||(35052814-35052846)
[»] chr5 (2 HSPs)
chr5 (80-122)||(8870505-8870547)
chr5 (78-158)||(11297115-11297195)
[»] chr6 (2 HSPs)
chr6 (78-122)||(7351590-7351634)
chr6 (78-122)||(13908347-13908391)


Alignment Details
Target: chr2 (Bit Score: 476; Significance: 0; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 17 - 500
Target Start/End: Original strand, 40077369 - 40077852
Alignment:
Q  17 atatgttaagcttaattgctaattgttgaaagcataaaatgttgaacacctttttgggacatgtttgaattgacttatctgagcttatgtactgacataa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40077369 atatgttaagcttaattgctaattgttgaaagcataaaatgttgaacacctttttgggacatgtttgaattgacttatctgagcttatgtactgacataa 40077468  T
Q  117 gcacttctaagactctttgagaaagactatgaaaacaacttatttatataaaagtaatttgatgtatttatgttttgtcaataaaaatagcttatataga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40077469 gcacttctaagactctttgagaaagactatgaaaacaacttatttatataaaagtaatttgatttatttatgttttgtcaataaaaatagcttatataga 40077568  T
Q  217 agcacttatatggtataagtgcttaatttaagttgtttatctaaacatggtcttgatctagtttcgaatgaaaagacatagattaaggttagaaagacta 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40077569 agcacttatatggtataagtgcttaatttaagttgtttatctaaacatggtcttgatctagtttcgaatgaaaagacatagattaaggttagaaagacta 40077668  T
Q  317 ttataattcattgaaatgaaatggatttttgcagtatgattttgatgggaggaaggatttagtgaaatttgtaaaggcagtggctgaggcaggactatat 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40077669 ttataattcattgaaatgaaatggatttttgcagtatgattttgatgggaggaaggatttagtgaaatttgtaaaggcagtggctgaggcaggactatat 40077768  T
Q  417 gtgcatctccggatcggtccatacgtgtgtgctgaatggaactacgggtaaagtttggtcctttctgtgtattatttttctgtg 500  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40077769 gtgcatctccggatcggtccatatgtgtgtgctgaatggaactacgggtaaagtttggtcctttctgtgtattatttttctgtg 40077852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 300 - 475
Target Start/End: Original strand, 40059570 - 40059745
Alignment:
Q  300 taaggttagaaagactattataattcattgaaatgaaatggatttttgcagtatgattttgatgggaggaaggatttagtgaaatttgtaaaggcagtgg 399  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40059570 taaggttagaaagactattataattcactgaaatgaaatggatttttgcagtatgattttgatgggaggaaggatttagtgaaatttgtgaaggcagtgg 40059669  T
Q  400 ctgaggcaggactatatgtgcatctccggatcggtccatacgtgtgtgctgaatggaactacgggtaaagtttggt 475  Q
    ||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||    
T  40059670 ctgaggcgggactatatgtgcatctccgcatcggtccatatgtttgtgctgaatggaactatgggtaaagtttggt 40059745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 307 - 496
Target Start/End: Original strand, 40085464 - 40085653
Alignment:
Q  307 agaaagactattataattcattgaaatgaaatggatttttgcagtatgattttgatgggaggaaggatttagtgaaatttgtaaaggcagtggctgaggc 406  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  40085464 agaaagtctatcttaattcattgaaatgaaatggatttttgcagtatgattttgatgggaggaaggatttggtgaaatttgtgaaagcagtagctgaggc 40085563  T
Q  407 aggactatatgtgcatctccggatcggtccatacgtgtgtgctgaatggaactacgggtaaagtttggtcctttctgtgtattatttttc 496  Q
    ||| |||||||||||||||||||| |||||||| || ||| ||||||||||||| ||||||||||||||  ||| |||||||||| ||||    
T  40085564 aggtctatatgtgcatctccggattggtccatatgtttgttctgaatggaactatgggtaaagtttggtaatttatgtgtattatatttc 40085653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 38259605 - 38259687
Alignment:
Q  77 atgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    ||||||||||||| |||| ||| ||||| ||| ||||||| ||||||| ||||||||||| | ||  |||| |||||||||||    
T  38259605 atgtttgaattgatttatttgatcttatttacggacataaacacttctgagactctttgaaatagcttatggaaacaacttat 38259687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 3973693 - 3973612
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    |||||| ||| |||||| |||||||||  ||||| |||||||||| ||||||| ||||||| ||  |||| |||||||||||    
T  3973693 tgtttggattcacttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttat 3973612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 22878250 - 22878192
Alignment:
Q  77 atgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttg 135  Q
    ||||||| |||||||||| |||||||||  |||||||||||||||| | ||||| ||||    
T  22878250 atgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttg 22878192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 15377916 - 15377836
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    ||||| ||||| ||||| |||||||||||||| ||||||||| || |||| || |||| ||||  ||||| |||||||||||    
T  15377916 tgtttcaattggcttatttgagcttatgtactaacataagcaattgtaaggctgtttg-gaaaatctatggaaacaacttat 15377836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 40085237 - 40085270
Alignment:
Q  18 tatgttaagcttaattgctaattgttgaaagcat 51  Q
    ||||||||||| ||||||||||||||||||||||    
T  40085237 tatgttaagctgaattgctaattgttgaaagcat 40085270  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 1830190 - 1830146
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||||| |||||||||| |||| |||| |||||||||||||||||    
T  1830190 tgtttggattgacttatttgagtttatttactgacataagcactt 1830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 18525159 - 18525203
Alignment:
Q  77 atgtttgaattgacttatctgagcttatgtactgacataagcact 121  Q
    |||||||||||||||||| ||||||||| ||| ||||||| ||||    
T  18525159 atgtttgaattgacttatttgagcttatctacagacataaacact 18525203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 41905833 - 41905917
Alignment:
Q  76 catgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttatt 160  Q
    ||||||||| ||||||||| ||| ||||| || |  ||||| ||||| | |||||||| |||| ||  |||||||||||||||||    
T  41905833 catgtttgatttgacttatttgaacttatttatttgcataaacacttatgagactcttcgagagagcttatgaaaacaacttatt 41905917  T

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Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 468
Target Start/End: Complemental strand, 22015910 - 22015825
Alignment:
Q  383 atttgtaaaggcagtggctgaggcaggactatatgtgcatctccggatcggtccatacgtgtgtgctgaatggaactacgggtaaa 468  Q
    |||||| |||||||| || |  |||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  22015910 atttgtgaaggcagtagcagcagcaggtttatatgtgcatctccggatcggtccatatgtgtgtgctgaatggaattacgggtaaa 22015825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 6428169 - 6428088
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    ||||||||||||||||| ||||||||| || ||  |||||||||| | ||||  ||||||| ||| ||||||||||||||||    
T  6428169 tgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttat 6428088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 2811624 - 2811562
Alignment:
Q  76 catgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgaga 138  Q
    ||||||||||||||||||| |||| |||| ||||| |||||||| || | ||||| |||||||    
T  2811624 catgtttgaattgacttatttgaggttatctactggcataagcatttatgagactgtttgaga 2811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 18628479 - 18628553
Alignment:
Q  85 attgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    |||||| ||| ||||||||| ||||||||||| ||||| | ||||| |||| || ||  ||||||||||||||||    
T  18628479 attgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 18628553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 2996712 - 2996643
Alignment:
Q  90 cttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    ||||| ||| ||||| || |||||||||||||| | ||||| ||||||| ||  ||||||||||||||||    
T  2996712 cttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttat 2996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 1133079 - 1133039
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagc 118  Q
    ||||||||||||||||| ||||||||| |||||||| ||||    
T  1133079 tgtttgaattgacttatttgagcttatctactgacacaagc 1133039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 25717744 - 25717700
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||||| |||| ||||| ||||||||||||| |||||||||||||    
T  25717744 tgtttggattgtcttatttgagcttatgtaccgacataagcactt 25717700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 11059648 - 11059700
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagact 130  Q
    ||||||||||||||||| ||||||||| || |||||||||||||| |||||||    
T  11059648 tgtttgaattgacttatgtgagcttatctaatgacataagcacttataagact 11059700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 7008749 - 7008705
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    ||||||||||||||||| |||| |||| ||||| |||||||||||    
T  7008749 tgtttgaattgacttatttgagtttatctactggcataagcactt 7008705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 14926901 - 14926961
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgaga 138  Q
    |||||| |||||||||| ||| ||||| ||||| ||||||||||| | ||||| |||||||    
T  14926901 tgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgaga 14926961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 50211886 - 50211805
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    |||||| ||| |||||| | ||||||| |||| |||||||||||| ||||||| ||||||| |   ||||||||||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 11040538 - 11040608
Alignment:
Q  83 gaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaaca 153  Q
    |||||||||||| ||||||||| |||| |||||| ||||||||| |||  |||||| ||  ||||||||||    
T  11040538 gaattgacttatatgagcttatctactcacataaacacttctaatactgattgagagagcatatgaaaaca 11040608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 22667547 - 22667494
Alignment:
Q  85 attgacttatctgagcttatgtactgacataagcacttctaagactctttgaga 138  Q
    |||| ||||| ||||||||| ||||||||||||||||| | ||||| |||||||    
T  22667547 attggcttatttgagcttatctactgacataagcacttgtgagactgtttgaga 22667494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 22724186 - 22724133
Alignment:
Q  85 attgacttatctgagcttatgtactgacataagcacttctaagactctttgaga 138  Q
    |||| ||||| ||||||||| ||||||||||||||||| | ||||| |||||||    
T  22724186 attggcttatttgagcttatctactgacataagcacttgtgagactgtttgaga 22724133  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 30657437 - 30657393
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||||||||||| |||| |||| |||| |||||||||||||||||    
T  30657437 tgtttgaattgatttatttgagtttatctactgacataagcactt 30657393  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 6292643 - 6292599
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcactt 6292599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 12564418 - 12564462
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||    
T  12564418 tgtttgaattgacttatttgagcttatatactgatataagcactt 12564462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 27807266 - 27807206
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgaga 138  Q
    ||||| ||||||||||| ||| ||| | |||||||||||||| || ||||||| |||||||    
T  27807266 tgtttaaattgacttatttgaacttttctactgacataagcatttgtaagactgtttgaga 27807206  T

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Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 7513709 - 7513666
Alignment:
Q  79 gtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||    
T  7513709 gtttgaattgacttatttgagcttatctactggcataagcactt 7513666  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 19302482 - 19302521
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataag 117  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataag 19302521  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 25670511 - 25670586
Alignment:
Q  84 aattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 159  Q
    ||||||||||  ||||||||| || |||||||||| ||| | ||||| |||||||||   ||||||||||||||||    
T  25670511 aattgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttat 25670586  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 1418575 - 1418526
Alignment:
Q  73 ggacatgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||| |||||| |||||||||| ||||||||| ||||| |||||||||||    
T  1418575 ggacttgtttggattgacttatttgagcttatctactggcataagcactt 1418526  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 34036068 - 34036031
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacata 115  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacata 34036031  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 30748953 - 30748993
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagc 118  Q
    |||||||||||| |||| ||||||||| |||||||||||||    
T  30748953 tgtttgaattgagttatttgagcttatctactgacataagc 30748993  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 35052846 - 35052814
Alignment:
Q  18 tatgttaagcttaattgctaattgttgaaagca 50  Q
    ||||||||||| |||||||||||||||||||||    
T  35052846 tatgttaagctgaattgctaattgttgaaagca 35052814  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 8870505 - 8870547
Alignment:
Q  80 tttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    |||||||||| |||| ||||||||||||||| |||||||||||    
T  8870505 tttgaattgatttatttgagcttatgtactgccataagcactt 8870547  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 11297115 - 11297195
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaactta 158  Q
    ||||||||||||||||| | ||||||| || || ||||| ||||| ||||||| ||||| | ||  |||| ||||||||||    
T  11297115 tgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaactta 11297195  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 7351590 - 7351634
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||||    
T  7351590 tgtttaaattgacttatttgagtttatctactgacataagcactt 7351634  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 13908391 - 13908347
Alignment:
Q  78 tgtttgaattgacttatctgagcttatgtactgacataagcactt 122  Q
    ||||||||||||||||| ||| ||||| ||||||||||| |||||    
T  13908391 tgtttgaattgacttatttgaacttatctactgacataaacactt 13908347  T

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