View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4604-Insertion-3 (Length: 1007)

Name: NF4604-Insertion-3
Description: NF4604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4604-Insertion-3
NF4604-Insertion-3
[»] chr7 (64 HSPs)
chr7 (106-377)||(27794969-27795239)
chr7 (609-1001)||(27794604-27794977)
chr7 (365-570)||(33655148-33655358)
chr7 (407-609)||(41496957-41497160)
chr7 (368-611)||(47390852-47391102)
chr7 (371-609)||(40196532-40196765)
chr7 (371-593)||(1051517-1051742)
chr7 (375-564)||(34235053-34235243)
chr7 (373-589)||(24970187-24970407)
chr7 (375-606)||(42306348-42306571)
chr7 (369-613)||(25887190-25887440)
chr7 (407-611)||(43230277-43230481)
chr7 (366-570)||(17852876-17853074)
chr7 (371-534)||(37417709-37417867)
chr7 (366-498)||(39855977-39856114)
chr7 (371-609)||(13770948-13771190)
chr7 (438-593)||(4833548-4833703)
chr7 (368-591)||(10315620-10315858)
chr7 (473-612)||(18231693-18231833)
chr7 (365-496)||(26365761-26365898)
chr7 (447-553)||(22163167-22163272)
chr7 (447-553)||(22221875-22221980)
chr7 (374-464)||(23029480-23029570)
chr7 (369-564)||(34228364-34228565)
chr7 (431-565)||(45940701-45940835)
chr7 (411-531)||(38378090-38378205)
chr7 (372-498)||(31571580-31571713)
chr7 (417-558)||(40572287-40572427)
chr7 (457-611)||(13425118-13425273)
chr7 (732-810)||(27794108-27794186)
chr7 (417-558)||(41008233-41008375)
chr7 (538-611)||(39856037-39856111)
chr7 (411-502)||(48152029-48152115)
chr7 (658-810)||(27787059-27787211)
chr7 (658-810)||(27790215-27790367)
chr7 (872-961)||(27795443-27795531)
chr7 (538-611)||(13771118-13771192)
chr7 (417-502)||(18795703-18795788)
chr7 (658-810)||(27793347-27793499)
chr7 (373-434)||(32872788-32872849)
chr7 (541-612)||(1051673-1051745)
chr7 (371-498)||(33519048-33519180)
chr7 (538-608)||(31571642-31571713)
chr7 (369-438)||(33519220-33519294)
chr7 (416-498)||(18063673-18063751)
chr7 (417-502)||(35422015-35422100)
chr7 (369-453)||(40196530-40196619)
chr7 (364-445)||(48013668-48013744)
chr7 (521-612)||(37925838-37925930)
chr7 (371-434)||(17853046-17853104)
chr7 (407-498)||(19261951-19262041)
chr7 (412-492)||(26079964-26080046)
chr7 (412-492)||(26103751-26103833)
chr7 (439-570)||(30891034-30891165)
chr7 (539-609)||(36267553-36267624)
chr7 (543-609)||(47390855-47390922)
chr7 (369-403)||(36267551-36267585)
chr7 (544-609)||(40282197-40282263)
chr7 (368-434)||(41008359-41008425)
chr7 (369-403)||(41496955-41496989)
chr7 (364-445)||(48015372-48015458)
chr7 (368-434)||(48094069-48094130)
chr7 (369-403)||(48881556-48881590)
chr7 (537-609)||(48881558-48881631)
[»] chr8 (54 HSPs)
chr8 (371-591)||(16652958-16653174)
chr8 (368-593)||(31543089-31543319)
chr8 (377-593)||(1281149-1281370)
chr8 (407-570)||(11575446-11575609)
chr8 (368-565)||(7979137-7979339)
chr8 (403-611)||(41103502-41103713)
chr8 (371-570)||(1026889-1027092)
chr8 (411-609)||(3726863-3727054)
chr8 (366-570)||(7502994-7503203)
chr8 (417-609)||(31738474-31738667)
chr8 (407-559)||(30479768-30479920)
chr8 (368-593)||(11033416-11033645)
chr8 (372-609)||(11785537-11785770)
chr8 (371-559)||(9718530-9718723)
chr8 (371-560)||(6315066-6315256)
chr8 (371-548)||(37032390-37032561)
chr8 (366-534)||(42650409-42650580)
chr8 (369-580)||(2248450-2248666)
chr8 (368-570)||(28083739-28083946)
chr8 (423-565)||(37923123-37923265)
chr8 (412-565)||(30664407-30664560)
chr8 (369-526)||(33922523-33922680)
chr8 (369-593)||(36308850-36309070)
chr8 (375-593)||(10028114-10028350)
chr8 (371-570)||(40990221-40990427)
chr8 (417-566)||(29358384-29358532)
chr8 (413-564)||(13405023-13405178)
chr8 (371-498)||(12022255-12022387)
chr8 (374-492)||(38198167-38198284)
chr8 (371-566)||(4247562-4247764)
chr8 (374-498)||(24243159-24243287)
chr8 (369-435)||(2412962-2413028)
chr8 (509-611)||(34634286-34634389)
chr8 (369-434)||(43732863-43732933)
chr8 (417-565)||(29690967-29691118)
chr8 (450-495)||(35694870-35694915)
chr8 (537-609)||(43732858-43732931)
chr8 (538-609)||(31543244-31543316)
chr8 (448-488)||(34633819-34633859)
chr8 (521-611)||(8815296-8815387)
chr8 (367-403)||(3726859-3726895)
chr8 (369-432)||(1026857-1026915)
chr8 (401-491)||(27483595-27483685)
chr8 (412-495)||(36166205-36166287)
chr8 (538-611)||(1027020-1027094)
chr8 (369-459)||(2481930-2482019)
chr8 (369-403)||(8815139-8815173)
chr8 (369-403)||(31738635-31738669)
chr8 (364-498)||(34552560-34552693)
chr8 (371-404)||(9718489-9718522)
chr8 (415-492)||(20472810-20472887)
chr8 (441-498)||(27487065-27487122)
chr8 (367-400)||(30365126-30365159)
chr8 (566-614)||(43732674-43732723)
[»] chr5 (77 HSPs)
chr5 (371-608)||(13634711-13634954)
chr5 (371-558)||(9856890-9857072)
chr5 (371-593)||(7544136-7544363)
chr5 (709-1002)||(40752240-40752546)
chr5 (369-611)||(16938477-16938725)
chr5 (371-570)||(26414893-26415097)
chr5 (720-965)||(40764781-40765028)
chr5 (368-584)||(4373592-4373813)
chr5 (395-609)||(37606924-37607138)
chr5 (369-565)||(9798657-9798853)
chr5 (411-609)||(37551453-37551649)
chr5 (411-609)||(37654283-37654479)
chr5 (371-559)||(20146917-20147114)
chr5 (395-609)||(37779134-37779347)
chr5 (407-564)||(28279522-28279680)
chr5 (413-564)||(16501836-16501988)
chr5 (412-570)||(10072687-10072845)
chr5 (375-570)||(2550392-2550592)
chr5 (418-566)||(36392194-36392341)
chr5 (411-593)||(36363077-36363259)
chr5 (371-609)||(10476026-10476272)
chr5 (428-570)||(8502875-8503017)
chr5 (448-564)||(20513491-20513611)
chr5 (509-593)||(1657956-1658040)
chr5 (369-498)||(11756876-11757009)
chr5 (441-564)||(17024270-17024393)
chr5 (407-498)||(40815338-40815428)
chr5 (509-612)||(14245085-14245189)
chr5 (522-609)||(14245202-14245290)
chr5 (374-490)||(14681473-14681593)
chr5 (653-861)||(40752563-40752774)
chr5 (371-500)||(10204576-10204710)
chr5 (609-770)||(40765769-40765930)
chr5 (369-438)||(40305668-40305737)
chr5 (654-827)||(40751708-40751882)
chr5 (417-498)||(42681504-42681585)
chr5 (411-465)||(11419306-11419360)
chr5 (365-503)||(20409659-20409796)
chr5 (417-479)||(22022901-22022963)
chr5 (732-827)||(40750408-40750505)
chr5 (957-1003)||(40764368-40764414)
chr5 (536-593)||(11757073-11757130)
chr5 (654-810)||(40763691-40763846)
chr5 (538-612)||(26414890-26414965)
chr5 (370-488)||(14684604-14684729)
chr5 (371-492)||(15986742-15986868)
chr5 (732-827)||(40762414-40762511)
chr5 (517-609)||(2183965-2184058)
chr5 (106-215)||(40755142-40755250)
chr5 (407-483)||(10650470-10650546)
chr5 (537-611)||(11436937-11437012)
chr5 (371-486)||(13298271-13298386)
chr5 (482-570)||(22023483-22023573)
chr5 (472-570)||(29002246-29002344)
chr5 (521-609)||(14684639-14684728)
chr5 (539-611)||(20147048-20147116)
chr5 (369-434)||(22023545-22023605)
chr5 (142-183)||(40766118-40766159)
chr5 (522-570)||(10650469-10650517)
chr5 (395-454)||(43405-43464)
chr5 (538-612)||(7544133-7544208)
chr5 (368-403)||(10476240-10476275)
chr5 (369-403)||(5688602-5688636)
chr5 (366-400)||(10043005-10043039)
chr5 (371-444)||(11436939-11437017)
chr5 (369-403)||(14245258-14245292)
chr5 (375-433)||(29002220-29002273)
chr5 (538-611)||(36392321-36392395)
chr5 (369-438)||(37551577-37551651)
chr5 (369-438)||(37654407-37654481)
chr5 (366-403)||(2184026-2184063)
chr5 (407-488)||(5688454-5688535)
chr5 (541-613)||(15986799-15986872)
chr5 (369-437)||(37607067-37607140)
chr5 (369-437)||(37779276-37779349)
chr5 (423-496)||(39966066-39966139)
chr5 (260-377)||(40752810-40752926)
[»] chr2 (50 HSPs)
chr2 (369-611)||(23748103-23748341)
chr2 (371-570)||(15224734-15224938)
chr2 (369-611)||(36347539-36347787)
chr2 (374-570)||(19566860-19567057)
chr2 (373-593)||(36046221-36046443)
chr2 (412-570)||(39732769-39732926)
chr2 (376-590)||(8426899-8427110)
chr2 (374-549)||(12541773-12541949)
chr2 (410-611)||(9631601-9631806)
chr2 (365-593)||(31795786-31796014)
chr2 (417-593)||(40022421-40022600)
chr2 (407-570)||(39821710-39821873)
chr2 (439-565)||(16565850-16565976)
chr2 (411-553)||(28262500-28262642)
chr2 (407-568)||(9427026-9427188)
chr2 (368-493)||(35736172-35736302)
chr2 (374-569)||(36566891-36567093)
chr2 (417-554)||(37739949-37740085)
chr2 (451-548)||(17379897-17379994)
chr2 (407-498)||(886959-887048)
chr2 (469-565)||(42316809-42316905)
chr2 (411-570)||(2241455-2241622)
chr2 (411-553)||(39354231-39354373)
chr2 (460-609)||(887210-887353)
chr2 (437-580)||(12751885-12752029)
chr2 (371-498)||(41778773-41778905)
chr2 (412-498)||(6721734-6721820)
chr2 (469-559)||(34209567-34209657)
chr2 (367-491)||(41841678-41841807)
chr2 (536-611)||(17380011-17380087)
chr2 (511-570)||(1583222-1583281)
chr2 (417-570)||(7681299-7681448)
chr2 (415-491)||(3094472-3094548)
chr2 (481-565)||(27926668-27926752)
chr2 (412-488)||(29525855-29525931)
chr2 (413-462)||(9591983-9592032)
chr2 (413-498)||(18811376-18811460)
chr2 (537-609)||(22356175-22356248)
chr2 (517-612)||(35736338-35736434)
chr2 (372-434)||(39821845-39821902)
chr2 (540-612)||(15224868-15224941)
chr2 (371-434)||(9631736-9631804)
chr2 (538-609)||(36347713-36347785)
chr2 (520-611)||(42813774-42813866)
chr2 (369-403)||(17379844-17379878)
chr2 (543-593)||(39821686-39821736)
chr2 (415-488)||(2381109-2381182)
chr2 (517-570)||(14196820-14196873)
chr2 (422-491)||(32503216-32503284)
chr2 (413-498)||(45098216-45098301)
[»] chr4 (56 HSPs)
chr4 (371-609)||(54935067-54935313)
chr4 (367-612)||(45741886-45742137)
chr4 (371-590)||(31348341-31348565)
chr4 (371-609)||(54320435-54320678)
chr4 (410-612)||(49735465-49735668)
chr4 (375-593)||(27735749-27735972)
chr4 (368-611)||(41174353-41174591)
chr4 (371-570)||(29798288-29798489)
chr4 (368-547)||(26166934-26167118)
chr4 (369-570)||(46007739-46007947)
chr4 (369-568)||(47433751-47433955)
chr4 (371-609)||(1968351-1968603)
chr4 (373-570)||(2247843-2248043)
chr4 (411-590)||(6891405-6891584)
chr4 (422-564)||(36151632-36151773)
chr4 (422-609)||(5730830-5731018)
chr4 (400-593)||(17938124-17938318)
chr4 (418-593)||(35248738-35248913)
chr4 (368-553)||(16400797-16400987)
chr4 (412-565)||(44784038-44784190)
chr4 (368-498)||(22920978-22921114)
chr4 (368-498)||(22970685-22970821)
chr4 (364-498)||(37711131-37711275)
chr4 (369-593)||(45132514-45132741)
chr4 (412-497)||(28332850-28332935)
chr4 (384-570)||(24565386-24565575)
chr4 (423-498)||(2917075-2917150)
chr4 (371-498)||(56135749-56135881)
chr4 (374-454)||(31719991-31720072)
chr4 (481-570)||(34110920-34111008)
chr4 (368-492)||(4437543-4437661)
chr4 (364-498)||(17182597-17182736)
chr4 (413-492)||(55510217-55510296)
chr4 (538-611)||(1968531-1968605)
chr4 (369-483)||(27775581-27775698)
chr4 (528-609)||(37711285-37711367)
chr4 (368-433)||(56135908-56135968)
chr4 (359-454)||(11089672-11089765)
chr4 (520-611)||(29993769-29993861)
chr4 (521-612)||(56135746-56135838)
chr4 (517-611)||(6938398-6938493)
chr4 (371-593)||(21694907-21695132)
chr4 (366-403)||(37711335-37711372)
chr4 (542-591)||(47433885-47433934)
chr4 (541-611)||(54935065-54935137)
chr4 (368-498)||(11842316-11842439)
chr4 (538-593)||(27735762-27735817)
chr4 (415-498)||(43961459-43961542)
chr4 (369-403)||(49735704-49735738)
chr4 (377-459)||(49936170-49936252)
chr4 (369-403)||(54320646-54320680)
chr4 (369-403)||(54935281-54935315)
chr4 (368-401)||(5730827-5730860)
chr4 (377-434)||(46007715-46007767)
chr4 (521-613)||(51329792-51329885)
chr4 (521-609)||(54576484-54576573)
[»] chr1 (47 HSPs)
chr1 (408-609)||(40094933-40095136)
chr1 (369-613)||(30010330-30010580)
chr1 (371-593)||(12234010-12234237)
chr1 (364-590)||(8529802-8530023)
chr1 (374-609)||(38509894-38510135)
chr1 (367-559)||(32951369-32951566)
chr1 (407-609)||(2858932-2859135)
chr1 (368-558)||(50744332-50744518)
chr1 (368-611)||(35349464-35349709)
chr1 (371-590)||(41498404-41498629)
chr1 (375-592)||(51597672-51597894)
chr1 (407-569)||(49946629-49946791)
chr1 (445-581)||(7444574-7444710)
chr1 (369-570)||(26940883-26941079)
chr1 (379-565)||(10391880-10392072)
chr1 (443-567)||(36285617-36285741)
chr1 (402-569)||(6563614-6563779)
chr1 (376-570)||(44210947-44211134)
chr1 (411-556)||(45585739-45585884)
chr1 (472-593)||(20576150-20576269)
chr1 (450-580)||(41676363-41676495)
chr1 (412-540)||(42230585-42230712)
chr1 (368-454)||(41676437-41676523)
chr1 (374-462)||(2470883-2470966)
chr1 (368-460)||(10392023-10392115)
chr1 (368-498)||(1085602-1085737)
chr1 (543-611)||(41498402-41498471)
chr1 (538-609)||(35349634-35349706)
chr1 (396-459)||(26324049-26324112)
chr1 (413-488)||(49832594-49832669)
chr1 (369-501)||(2506547-2506674)
chr1 (368-434)||(38509891-38509962)
chr1 (538-611)||(12234008-12234082)
chr1 (538-615)||(30010326-30010404)
chr1 (369-434)||(40094931-40095001)
chr1 (541-609)||(40709292-40709361)
chr1 (369-433)||(20607221-20607285)
chr1 (412-491)||(43553049-43553129)
chr1 (377-429)||(44996665-44996717)
chr1 (368-403)||(2470727-2470762)
chr1 (538-589)||(10391893-10391944)
chr1 (539-593)||(25268437-25268491)
chr1 (517-591)||(49832566-49832640)
chr1 (538-591)||(2859104-2859157)
chr1 (366-403)||(20607429-20607466)
chr1 (415-492)||(33643317-33643394)
chr1 (371-404)||(51303384-51303417)
[»] chr3 (57 HSPs)
chr3 (369-570)||(37102189-37102385)
chr3 (371-609)||(24560217-24560461)
chr3 (408-570)||(30200128-30200293)
chr3 (368-566)||(220441-220644)
chr3 (371-570)||(21773782-21773986)
chr3 (371-589)||(41110342-41110565)
chr3 (371-570)||(9312511-9312713)
chr3 (371-614)||(25654966-25655216)
chr3 (371-553)||(2387817-2387994)
chr3 (371-580)||(651740-651944)
chr3 (378-566)||(46556160-46556345)
chr3 (417-592)||(52473966-52474141)
chr3 (422-609)||(18654600-18654788)
chr3 (412-611)||(14898022-14898226)
chr3 (368-502)||(28582617-28582756)
chr3 (371-591)||(41039969-41040186)
chr3 (418-559)||(55327422-55327563)
chr3 (440-557)||(16275758-16275875)
chr3 (368-497)||(46204883-46205017)
chr3 (369-498)||(54574473-54574602)
chr3 (417-593)||(27541948-27542124)
chr3 (415-565)||(37807129-37807279)
chr3 (441-609)||(36568904-36569072)
chr3 (411-570)||(52185060-52185217)
chr3 (367-616)||(34640998-34641241)
chr3 (417-593)||(10748312-10748490)
chr3 (411-559)||(40463922-40464070)
chr3 (407-534)||(43005815-43005942)
chr3 (374-488)||(6803323-6803442)
chr3 (375-492)||(12790377-12790498)
chr3 (538-612)||(24560214-24560289)
chr3 (469-574)||(13082890-13083003)
chr3 (407-498)||(54996792-54996880)
chr3 (538-611)||(25655144-25655218)
chr3 (538-611)||(41110493-41110567)
chr3 (363-492)||(49815424-49815547)
chr3 (369-498)||(40858573-40858697)
chr3 (369-498)||(42699724-42699848)
chr3 (537-593)||(26135968-26136024)
chr3 (504-615)||(28581180-28581292)
chr3 (407-498)||(37236964-37237054)
chr3 (372-434)||(40858741-40858798)
chr3 (369-434)||(30200096-30200156)
chr3 (417-498)||(45663256-45663336)
chr3 (367-404)||(48683815-48683852)
chr3 (369-433)||(651907-651971)
chr3 (538-609)||(28582681-28582753)
chr3 (418-498)||(51819237-51819317)
chr3 (364-403)||(24560429-24560468)
chr3 (371-434)||(37102159-37102217)
chr3 (375-498)||(46978441-46978559)
chr3 (369-438)||(9312474-9312543)
chr3 (413-454)||(18086027-18086068)
chr3 (368-401)||(18654597-18654630)
chr3 (369-434)||(21773958-21774018)
chr3 (442-479)||(31684362-31684399)
chr3 (367-404)||(41414280-41414317)
[»] scaffold0067 (3 HSPs)
scaffold0067 (371-609)||(39186-39434)
scaffold0067 (367-434)||(39182-39255)
scaffold0067 (538-611)||(39362-39436)
[»] chr6 (42 HSPs)
chr6 (366-570)||(21606884-21607093)
chr6 (372-611)||(9719029-9719273)
chr6 (409-611)||(9721136-9721338)
chr6 (374-611)||(30487304-30487546)
chr6 (407-570)||(31849151-31849314)
chr6 (411-615)||(33235996-33236200)
chr6 (369-559)||(4097563-4097759)
chr6 (428-581)||(34176397-34176550)
chr6 (369-570)||(1300627-1300824)
chr6 (426-560)||(5585352-5585486)
chr6 (371-608)||(10818229-10818459)
chr6 (374-593)||(19278051-19278278)
chr6 (371-593)||(16738013-16738239)
chr6 (424-540)||(13583777-13583893)
chr6 (371-593)||(1390319-1390546)
chr6 (371-609)||(14515473-14515715)
chr6 (411-611)||(665839-666046)
chr6 (364-488)||(2893623-2893752)
chr6 (417-558)||(10348850-10348992)
chr6 (369-482)||(12811108-12811226)
chr6 (374-564)||(33041473-33041660)
chr6 (412-498)||(2892715-2892801)
chr6 (407-481)||(6034201-6034275)
chr6 (407-502)||(16509322-16509416)
chr6 (538-612)||(14515470-14515545)
chr6 (423-564)||(1395692-1395834)
chr6 (407-498)||(2892955-2893049)
chr6 (473-566)||(2900017-2900110)
chr6 (537-611)||(10818227-10818302)
chr6 (377-492)||(26318317-26318431)
chr6 (436-498)||(25741477-25741539)
chr6 (374-558)||(30849966-30850153)
chr6 (371-434)||(21606854-21606912)
chr6 (537-606)||(4097684-4097754)
chr6 (509-570)||(9298628-9298690)
chr6 (422-498)||(14548718-14548794)
chr6 (367-403)||(15323221-15323257)
chr6 (367-403)||(15353360-15353396)
chr6 (546-593)||(31849127-31849174)
chr6 (369-403)||(14515683-14515717)
chr6 (522-559)||(12811034-12811071)
chr6 (538-606)||(19278210-19278278)
[»] scaffold0262 (1 HSPs)
scaffold0262 (407-593)||(16313-16499)
[»] scaffold0171 (1 HSPs)
scaffold0171 (411-565)||(15995-16149)
[»] scaffold0096 (1 HSPs)
scaffold0096 (368-570)||(6581-6787)
[»] scaffold0026 (2 HSPs)
scaffold0026 (374-566)||(1175-1372)
scaffold0026 (538-606)||(1175-1244)
[»] scaffold0341 (1 HSPs)
scaffold0341 (402-569)||(18807-18972)
[»] scaffold0294 (1 HSPs)
scaffold0294 (417-593)||(15314-15489)
[»] scaffold0240 (1 HSPs)
scaffold0240 (371-435)||(17715-17782)
[»] scaffold0198 (1 HSPs)
scaffold0198 (522-606)||(3150-3235)
[»] scaffold0012 (1 HSPs)
scaffold0012 (369-454)||(184609-184689)
[»] scaffold0007 (1 HSPs)
scaffold0007 (517-583)||(242367-242433)
[»] scaffold0119 (1 HSPs)
scaffold0119 (415-492)||(37432-37509)
[»] scaffold0006 (1 HSPs)
scaffold0006 (457-498)||(81523-81564)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 1e-96; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 106 - 377
Target Start/End: Complemental strand, 27795239 - 27794969
Alignment:
Q  106 aaaagttgtttatttatgaagattaaatcatgtaagatcatttaacttaacatgggtataaatgaaccaacaactatgtttcatatacaaaattaaatgt 205  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  27795239 aaaagttgtttatttatgaagattaaatcaagtatgatcatttaacttaacatgggtataaatgagccaacaactatgtttcataaacaaaattaaatgt 27795140  T
Q  206 caagtgcattgacgtccacattaacttgatttatcattt--ttaggtatagttatgatctttccaaaacatgttacaattaatttcaagttttaacacaa 303  Q
    |||||| ||||| || |||||||||||||||||  ||||  |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  27795139 caagtgaattgaggttcacattaacttgatttagaattttcttagg--tagttatgatctttccaaaagatattacaattaatttcaagttttaacacaa 27795042  T
Q  304 cacacatggtaaattacattttacgtattaaggaataatttatagttgtgcctacaatttatcttttagggtgt 377  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||||    
T  27795041 cacacatggtaaattacatattacgta-taaggaataatttattggtgtgcctccaatttatcttttagtgtgt 27794969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 609 - 1001
Target Start/End: Complemental strand, 27794977 - 27794604
Alignment:
Q  609 ttagtgtgttcagcattgggttattgttttaagctgccataaaatttggttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaa 708  Q
    |||||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||    
T  27794977 ttagtgtgttcagcattgagttattattttaagatgtcataaaatttggttcttgactaaattaaccgtgtaaaataaattttggctaaaagtaatttaa 27794878  T
Q  709 atgaaaatgattttataattggttgtattcatgtaaatctaaaagcctcgagttcatattaacttgatagagaattttctaaggtaattaccttcttttc 808  Q
    || ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||| ||| ||||       ||    
T  27794877 attaaaatga-tttataattgggtgtattcatgtaaatctaaaagccgcgagttcatattaact---tagagaattttctaaagtagttac-------tc 27794789  T
Q  809 aagacattgcaattttcatttgagttagtattcttttaacgttattcaagatt---nnnnnnnnngcacaacaccacctgtatcaccacc----taaagt 901  Q
    ||               ||||||||||||||||||||||||||||||||||||            ||||||||||| | |||||||||||    |||| |    
T  27794788 aa---------------atttgagttagtattcttttaacgttattcaagattaaaaaaaaaaaagcacaacaccaacggtatcaccacctaaataaaat 27794704  T
Q  902 acgccatattgcttctttaattttaggatgctatcatcacttcaatattaagatattaaataaactcacattgcaacattcaaactagtgttttgttttt 1001  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27794703 actccatattgcttctttaattttaggatgctatcatcacttcaatattaagatattaaataaactcacattgcaacattcaaactagtgttttattttt 27794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 365 - 570
Target Start/End: Complemental strand, 33655358 - 33655148
Alignment:
Q  365 tcttttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaa 459  Q
    |||||||| |||||||||||| |||||||||||||||||     | ||||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  33655358 tcttttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaa 33655259  T
Q  460 ataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    |||||| | |||||||||||||||||||||||| ||||| |||  ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  33655258 ataaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 33655159  T
Q  560 ataaaccctcc 570  Q
     ||||||||||    
T  33655158 gtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 407 - 609
Target Start/End: Complemental strand, 41497160 - 41496957
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||| |||  ||    
T  41497160 gagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcatttatcatgttaa 41497061  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacaca 605  Q
    | ||||||  |||||||||||||||| |  |||||||||||||||||| |||| |||| | ||| ||| ||||||||| ||||||||  ||| |||||||    
T  41497060 tatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacaca 41496961  T
Q  606 ccct 609  Q
    ||||    
T  41496960 ccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 368 - 611
Target Start/End: Original strand, 47390852 - 47391102
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| ||||| |||||||||||     |  |||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaata 47390951  T
Q  463 aatcatgtgtgattgaagtattatatga-tcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaat 561  Q
     || |  ||||||||||||||||||||| | |||||| |||  ||| ||||||| ||||||||||  ||| || ||||||||||||||||||||||||      
T  47390952 cattaattgtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaacc 47391051  T
Q  562 aaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||| |||| ||| ||||||||||||||||||  ||| |||||||||||||    
T  47391052 aaactctcccctcccttcccctcttaaaccctccatccaaacacaccctta 47391102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 371 - 609
Target Start/End: Complemental strand, 40196765 - 40196532
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||| ||||||| |||||||| |||||||||      ||||||||||  |||||||||||| || ||||||||||||||||||||||||||| | ||    
T  40196765 agggtgtatttggattgagggtttgggaggggag------gtttactttttgtttttaaattacggaatatataacatgtttttctaaaataaattaagt 40196672  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||||||||||| |||||| | |   || ||||||| ||||| ||||||||| || |||||||||||| ||||||||||| ||||||||||    
T  40196671 gtgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcc 40196572  T
Q  571 tctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||| |||||||||  |||||||  ||| |||||||||||    
T  40196571 tctcccttcccctcccaaaccctccatccaaacacaccct 40196532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 371 - 593
Target Start/End: Complemental strand, 1051742 - 1051517
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||     |  |||| |||| ||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaat 1051643  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||||||||| |||||||||| |||||| |||  ||| ||||||| |||||||||||||||||| |||||||||||||||||||||||  | |||    
T  1051642 taagtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaac 1051545  T
Q  566 cctcctctcacttcccctcttaaaccct 593  Q
    ||||| |||  |||||||| ||||||||    
T  1051544 cctcccctctattcccctcctaaaccct 1051517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 375 - 564
Target Start/End: Complemental strand, 34235243 - 34235053
Alignment:
Q  375 tgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgttttt-ctaaaataaatcatgtgtg 473  Q
    ||||||||||| |||||||||||||| |||  | | ||||||||||| |||||||||||| || |||||||||||||||| ||||||||||| | |||||    
T  34235243 tgtgtttggattgagggtttaggaggagaggagggtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtg 34235144  T
Q  474 attgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    |||||||||||||||||| |||||| ||   ||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  34235143 attgaagtattatatgattgtttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 34235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 373 - 589
Target Start/End: Complemental strand, 24970407 - 24970187
Alignment:
Q  373 ggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    ||||||||||||| |||||||||||||||   | |||||     |||  |||||||||||||||||  || ||||||||||||||||||||||||||| |    
T  24970407 ggtgtgtttggattgagggtttaggagggtttaggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaatta 24970308  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
     |||||||||||||||||||||||||||||| | |  ||| ||||||| |||||||||| ||||||| || ||||||||||||||||||||| |||| |     
T  24970307 agtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatca 24970208  T
Q  568 tcctctcacttcccctcttaaa 589  Q
    ||| ||| ||||||||| ||||    
T  24970207 tcccctc-cttcccctcctaaa 24970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 375 - 606
Target Start/End: Original strand, 42306348 - 42306571
Alignment:
Q  375 tgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtga 474  Q
    ||||||||||| |||| |||||||||| ||     |||||  |||||||||||||||||| ||||||||||||||| |||||||||||||| | | ||||    
T  42306348 tgtgtttggattgaggatttaggagggaag-----ggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtga 42306442  T
Q  475 ttgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctc 574  Q
    ||| |||||||||||    ||||| | |  ||| || |||| |||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||    
T  42306443 ttggagtattatatg----tttatgaggttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctc 42306538  T
Q  575 acttcccctcttaaaccct-aatctaaacacac 606  Q
    | |||||||| |||||||| |||| ||||||||    
T  42306539 aattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 369 - 613
Target Start/End: Original strand, 25887190 - 25887440
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    ||||||||||||||||| ||||||||| |||||||   |||||     |||  ||||||||| ||||| || ||||||||||||||||||||||||||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataa 25887289  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttt-taaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    || | ||||||||| ||||||||||||| |||||| ||   ||| ||||||| |||  ||||||||||||||  | | ||||||||||||||||||  ||    
T  25887290 attaagtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgta 25887389  T
Q  563 aaccctcctctcacttcccctcttaaaccctaatctaaacacacccttagt 613  Q
    ||| |||| ||| ||||||||| ||||||||   | |||||||||||||||    
T  25887390 aactctcccctcccttcccctcctaaacccttcaccaaacacacccttagt 25887440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 407 - 611
Target Start/End: Original strand, 43230277 - 43230481
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||| |||||||| |||||| |||||||||| |||  ||    
T  43230277 gagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagtgcgattgaagaattatacgatcgtttatcatgttaa 43230376  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaacccta-atctaaacaca 605  Q
    | ||||||| ||| |||||| | ||||  ||||||||||||||||||| |||| ||||| |||| ||   |||| ||| ||||||||| ||| |||||||    
T  43230377 tatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccctacatccaaacaca 43230475  T
Q  606 ccctta 611  Q
    | ||||    
T  43230476 cactta 43230481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 366 - 570
Target Start/End: Original strand, 17852876 - 17853074
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||||||||||||||| ||| ||||||||||||||||||     || |||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  17852876 cttttagggtgtgtttagattgagggtttaggaggggag-----ggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaat 17852970  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||||||| ||||||||||||||||||| |||    ||  || | ||||| |||||| |||||| |||  ||||||||||||||||||| ||| |    
T  17852971 taagtgtgattgaggtattatatgatcgtttatcatg-ttgttattttatctttttaaaaacttttcatagtgctcgtaatttaaaaatgaaaagtaagc 17853069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 371 - 534
Target Start/End: Complemental strand, 37417867 - 37417709
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| |||||||||||||||||      |||||||||||| ||||||||| || |||||||||||||||||||| ||| ||| | | ||    
T  37417867 agggtgtgtttggattgagggtttaggaggggat-----ggtttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagt 37417773  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcat 534  Q
    |||||||||||||||||||||||||||| |||  ||| ||||||| ||||| ||||||||||||    
T  37417772 gtgattgaagtattatatgatcgtttatcatgtgaatatgttaactttttagaaaacatttcat 37417709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 366 - 498
Target Start/End: Complemental strand, 39856114 - 39855977
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaa 460  Q
    |||| ||||||||||||||| |||||||||||||||||     |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39856114 ctttaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaa 39856015  T
Q  461 taaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||| | |||||| | ||||||||||||||| |||||    
T  39856014 taaattaagtgtgacttaagtattatatgatcatttat 39855977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 371 - 609
Target Start/End: Complemental strand, 13771190 - 13770948
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagg-----gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||| ||| |||||||||||||||||   ||||     ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaat 13771091  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | ||||||||  ||| |||||| || |||||| |||  ||| ||||||| ||||  | || |||| || ||||||||||||||||||| | || ||||     
T  13771090 taagtgtgattcgagtgttatatcattgtttatcatgttaatatgttaacttttt--ataatattttatagtgtccgtaatttaaaaataataagtaaat 13770993  T
Q  566 cctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||| ||| ||||||||| |||| ||| |||| |||||||||||    
T  13770992 cctcccctcccttcccctcctaaatcctcaatccaaacacaccct 13770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 438 - 593
Target Start/End: Complemental strand, 4833703 - 4833548
Alignment:
Q  438 ctatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgt 537  Q
    |||||||||||||  || |||||||||| |  ||||||| |||||||||||||| |||||| |||  |||  |||||| ||||| |||||||||||| ||    
T  4833703 ctatataacatgtaattttaaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagt 4833604  T
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||| |||||||||||||||||| |||||||||| ||| ||||||||| ||||||||    
T  4833603 gtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccct 4833548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 368 - 591
Target Start/End: Original strand, 10315620 - 10315858
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatc- 466  Q
    |||||||||||||||||| || | |||||||||||||     | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||     
T  10315620 tttagggtgtgtttggattgaagatttaggaggggag-----gatttacttttcttttttaaatttcagactatataacatatttttctaaaataaatcc 10315714  T
Q  467 ------------at-------gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatt 547  Q
                ||       |||||||||||||||||||| |||||||||  ||  ||| ||||||  |||||||||||||||||| ||||||||| ||    
T  10315715 agtgtttctaaaataaacccagtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattt 10315814  T
Q  548 taaaaatgaaaaataaaccctcctctcacttcccctcttaaacc 591  Q
    ||||||||||||||||| |  |||||| ||||||||| ||||||    
T  10315815 taaaaatgaaaaataaatcaccctctcccttcccctcctaaacc 10315858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 473 - 612
Target Start/End: Original strand, 18231693 - 18231833
Alignment:
Q  473 gattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctc 572  Q
    |||||||||||||||||||||||||| |||  ||| ||||||| |||||||||||||||||| ||||  |||||||||||||||||| |||| ||||| |    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccc 18231792  T
Q  573 tcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    || ||||||||| ||||| ||  ||| ||||||||||||||    
T  18231793 tcccttcccctcctaaacgctccatccaaacacacccttag 18231833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 365 - 496
Target Start/End: Original strand, 26365761 - 26365898
Alignment:
Q  365 tcttttagggtgtgtttggatcgagggtttaggagggg------agacgagggtttacttttcttttttaaattacagactatataacatgtttttctaa 458  Q
    |||||||| |||||||||||| ||||||||||||||||      ||  ||| |||||||||||||||||| |||||| |||||||||||| |||||||||    
T  26365761 tcttttagagtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaa 26365860  T
Q  459 aataaatcatgtgtgattgaagtattatatgatcgttt 496  Q
    ||||||  | ||||||||||||||||||||||| ||||    
T  26365861 aataaactaggtgtgattgaagtattatatgattgttt 26365898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 447 - 553
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  447 atgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaat 546  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||  ||| |||| || || ||||||||||||||| |||||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  547 ttaaaaa 553  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 447 - 553
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  447 atgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaat 546  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||  ||| |||| || || ||||||||||||||| |||||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  547 ttaaaaa 553  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 374 - 464
Target Start/End: Complemental strand, 23029570 - 23029480
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaa 464  Q
    |||||||| ||| || ||||||||||| ||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23029570 gtgtgtttcgattgaaggtttaggaggtgaagagagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaa 23029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 369 - 564
Target Start/End: Complemental strand, 34228565 - 34228364
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagg-----ggagacgagggtttacttttcttttttaaattacaga-ctatataacatgtttttctaaaata 462  Q
    |||||||||||||| || || |||||||||||     ||||  |||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||    
T  34228565 ttagggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaata 34228466  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaac-cttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaat 561  Q
    ||| | ||||||||||||||||||||||| | |||| ||   ||| |||||||  ||||| |||||| ||||| ||||||||||||  |||||| ||| |    
T  34228465 aattaagtgtgattgaagtattatatgattgcttatcatattaatatgttaacttttttataaaaca-ttcatagtgtccgtaattacaaaatgtaaagt 34228367  T
Q  562 aaa 564  Q
    |||    
T  34228366 aaa 34228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 431 - 565
Target Start/End: Complemental strand, 45940835 - 45940701
Alignment:
Q  431 ttacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatt 530  Q
    |||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||||| |||| ||||||||  ||| |  || | || |||||||||||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatt 45940736  T
Q  531 tcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    |||| ||||||||||| ||||||| |||| |||||    
T  45940735 tcatagtgtccgtaatataaaaataaaaagtaaac 45940701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 411 - 531
Target Start/End: Original strand, 38378090 - 38378205
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||| ||||||||||||||| |||  ||||||||||||||||||  |||||||||||  ||| ||||| |||||||||||||||||||||||     |||    
T  38378090 gttttcttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattatatgatcgtttattatg-----ttg 38378184  T
Q  511 ttaaccttttaaaaaacattt 531  Q
    ||||| |||||||||||||||    
T  38378185 ttaactttttaaaaaacattt 38378205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 372 - 498
Target Start/End: Complemental strand, 31571713 - 31571580
Alignment:
Q  372 gggtgtgtttggatcgagggtttaggaggggagacgagg-----gtttacttttcttttttaaattacagactatataacatg-tttttctaaaataa-a 464  Q
    |||||||||||||| |||||||||||||||||  |||||     |||||||||||||||||||||||| ||| |||||||||| ||||| ||||| || |    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaata 31571614  T
Q  465 tcatgtgtgattgaagtattatatgatcgtttat 498  Q
    | | |||||||||||||||||||| || ||||||    
T  31571613 ttaagtgtgattgaagtattatataattgtttat 31571580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 417 - 558
Target Start/End: Complemental strand, 40572427 - 40572287
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacc 516  Q
    |||| ||||| ||||||| |||||||||| |||||| |||||||||||| | | |||||| ||||||||||||| | ||||| |||  ||| |||||| |    
T  40572427 ttttatttttaaaattacggactatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaa-c 40572329  T
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaa 558  Q
    |||||||||| |||| || |  ||||||||||||||||||||    
T  40572328 ttttaaaaaatattttatagcatccgtaatttaaaaatgaaa 40572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 457 - 611
Target Start/End: Complemental strand, 13425273 - 13425118
Alignment:
Q  457 aaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatga 556  Q
    ||||||||| | |||||| |||||||| ||||||| |||||| |||  ||| |||| || ||| |||||| ||||  | ||||| ||||||||||||| |    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataa 13425174  T
Q  557 aaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||| ||||||  ||||||||| ||||||||  ||| |||||||||||||    
T  13425173 aaaataaaccatcctcttccttcccctcctaaaccctctatccaaacacaccctta 13425118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 732 - 810
Target Start/End: Complemental strand, 27794186 - 27794108
Alignment:
Q  732 tgtattcatgtaaatctaaaagcctcgagttcatattaacttgatagagaattttctaaggtaattaccttcttttcaa 810  Q
    |||||||||||||| |||||| | ||||| |||||||||||||| |||||||||||||||||  ||||| |||||||||    
T  27794186 tgtattcatgtaaagctaaaatcttcgaggtcatattaacttgacagagaattttctaaggtggttaccatcttttcaa 27794108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 417 - 558
Target Start/End: Original strand, 41008233 - 41008375
Alignment:
Q  417 ttttcttttttaaattacagactatataacatg-tttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaac 515  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||| | ||||||||||||  ||||||||| |||||| |||  ||| |||||||    
T  41008233 ttttcttttttaaattacggactatataacatgttttttttaaaataaattaagtgtgattgaag--ttatatgattgtttatcatgttaatatgttaac 41008330  T
Q  516 ctttta--aaaaacatttcatcgtgtccgtaatttaaaaatgaaa 558  Q
     ||| |  | ||| |  |||| || ||||||||||||||||||||    
T  41008331 ttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaa 41008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 39856037 - 39856111
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||| |||||||| |||| |||||||||||||    
T  39856037 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccctta 39856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 48152029 - 48152115
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatg 502  Q
    |||||| ||||||||||||||||| |    |||||||||||||||||||||||||   ||||||||||||||||| |||||| |||||||||    
T  48152029 gtttacctttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtgtgattgaagtatta-atgatcatttattatg 48152115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 810
Target Start/End: Complemental strand, 27787211 - 27787059
Alignment:
Q  658 ttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaaatgaaaa-tgattttataattggttgtattcatgtaaatctaaaagcct 756  Q
    ||||||| |||||||   |||||||||||||||||||| ||| |||| |||||  ||| |||||| | | ||   |||||||||||||| |||||| |||    
T  27787211 ttcttgaataaattaactgtgtaaaataaattttggctaaaaataatttaaatctaaagtgatttga-atttaaatgtattcatgtaaagctaaaatcct 27787113  T
Q  757 cgagttcatattaacttgatagagaattttctaaggtaattaccttcttttcaa 810  Q
    |||| | |||||||||| | | |||||||||||||||  ||||| |||||||||    
T  27787112 cgagcttatattaacttaacaaagaattttctaaggtggttaccatcttttcaa 27787059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 810
Target Start/End: Complemental strand, 27790367 - 27790215
Alignment:
Q  658 ttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaaatgaaaa-tgattttataattggttgtattcatgtaaatctaaaagcct 756  Q
    ||||||| |||||||   |||||||||||||||||||| ||| |||| |||||  ||| |||||| | | ||   |||||||||||||| |||||| |||    
T  27790367 ttcttgaataaattaactgtgtaaaataaattttggctaaaaataatttaaatctaaagtgatttga-atttaaatgtattcatgtaaagctaaaatcct 27790269  T
Q  757 cgagttcatattaacttgatagagaattttctaaggtaattaccttcttttcaa 810  Q
    |||| | |||||||||| | | |||||||||||||||  ||||| |||||||||    
T  27790268 cgagcttatattaacttaacaaagaattttctaaggtggttaccatcttttcaa 27790215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 872 - 961
Target Start/End: Complemental strand, 27795531 - 27795443
Alignment:
Q  872 cacaacaccacctgtatcaccacctaaagtacgccatattgcttctttaattttaggatgctatcatcacttcaatattaagatattaaa 961  Q
    |||||||||| || |||||||||||||||||||| ||||| ||| |||| || |||||| | |||||||||| |||||||||||| ||||    
T  27795531 cacaacaccaactatatcaccacctaaagtacgctatattacttttttatttataggattc-atcatcactttaatattaagatactaaa 27795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 13771118 - 13771192
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||| ||||| ||||| |||  ||| ||||||||| |||||||| ||||||||||||||||||    
T  13771118 gtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccctta 13771192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 417 - 502
Target Start/End: Complemental strand, 18795788 - 18795703
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatg 502  Q
    ||||||||||||||||||  || |||||| |||||||| ||||| |||||| |||| |||||| |||| || |||| |||||||||    
T  18795788 ttttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaagtgttattgaattattgtacgatcatttattatg 18795703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 658 - 810
Target Start/End: Complemental strand, 27793499 - 27793347
Alignment:
Q  658 ttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaaatgaaaa-tgattttataattggttgtattcatgtaaatctaaaagcct 756  Q
    ||||||| |||||||   |||||||||||||||||||| ||| |||| |||||  ||| |||||| | | ||   |||||||||||||| |||||| |||    
T  27793499 ttcttgaataaattaactgtgtaaaataaattttggctaaaaataatttaaatctaaagtgatttga-atttaaatgtattcatgtaaagctaaaatcct 27793401  T
Q  757 cgagttcatattaacttgatagagaattttctaaggtaattaccttcttttcaa 810  Q
     ||| | ||||||| |||| | |||||||||||||||  ||||| |||||||||    
T  27793400 agaggttatattaatttgacaaagaattttctaaggtggttaccatcttttcaa 27793347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 32872788 - 32872849
Alignment:
Q  373 ggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||| |||  |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  32872788 ggtgtgtttagatgaagggtttaggaggggaaaggagagtttacttttcttttttaaattac 32872849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 612
Target Start/End: Original strand, 1051673 - 1051745
Alignment:
Q  541 cgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    ||||||||||||| |||||||||| ||||  ||| ||||||||| |||||||| |||| ||||||||||||||    
T  1051673 cgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacacccttag 1051745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 498
Target Start/End: Original strand, 33519048 - 33519180
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||| |||||||||| |||| ||||||||||||     |  ||||| | |||||| |||||||||||||  || |||||| |||||||| | ||||||||    
T  33519048 agggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaat 33519147  T
Q  466 catgtgtgattgaagtattatatgatcgtttat 498  Q
     | ||||  |||||||||||||||||| |||||    
T  33519148 taagtgtttttgaagtattatatgatcatttat 33519180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 538 - 608
Target Start/End: Original strand, 31571642 - 31571713
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccc 608  Q
    |||||||||||||||| ||||| ||||| |||| ||| ||||||||| |||||||| |||| ||||||||||    
T  31571642 gtccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 33519294 - 33519220
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacagac 438  Q
    ||||||||||||||||| |||||||||||||     |||||  ||||| ||||||||||| ||||||||||||||    
T  33519294 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagac 33519220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 498
Target Start/End: Complemental strand, 18063751 - 18063673
Alignment:
Q  416 cttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||||||||  ||  ||||||    ||||| |||||||||| | |||||||||||||||||||||||| |||||    
T  18063751 cttttcttttttaaattatggataatataa----tttttttaaaataaattaagtgtgattgaagtattatatgatcatttat 18063673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 502
Target Start/End: Original strand, 35422015 - 35422100
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatg 502  Q
    |||| |||||||||||||| || || ||| |||||||| |||||||||| | ||||  ||||||||| |||||||  |||||||||    
T  35422015 ttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtatcatatgattatttattatg 35422100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 40196530 - 40196619
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttt 453  Q
    ||||||||||||||||| |||||||| ||||||||     || ||||||||||||||| ||||| |||||| |||  ||||| |||||||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgtttt 40196619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 48013744 - 48013668
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataa 445  Q
    |||||| ||||||||||||||| ||||| |||||||||||||     | ||||||||| ||||||||| ||||||| |||||    
T  48013744 atctttaagggtgtgtttggatggagggattaggaggggaga-----gcttacttttcgtttttaaatcacagactttataa 48013668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 521 - 612
Target Start/End: Complemental strand, 37925930 - 37925838
Alignment:
Q  521 aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    ||||||||||| |   ||| |||||||||||||  |||| | |||||||| ||| ||||||||| |||||||| |||| ||||||||||||||    
T  37925930 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 37925838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 17853104 - 17853046
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||| ||||||||||||||||||     || ||||||||| ||||||||||||    
T  17853104 agggtgtgtttggatggagggtttaggaggggag-----ggcttacttttcatttttaaattac 17853046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 498
Target Start/End: Complemental strand, 19262041 - 19261951
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||| |||||||||  |||||||||||||||| | ||| ||| ||||  ||||||||| |  ||||||||||||| ||||||||| |||||    
T  19262041 gagggcttacttttcaattttaaattacagactctttaaaatg-ttttgaaaaataaattaattgtgattgaagtactatatgatcatttat 19261951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 492
Target Start/End: Original strand, 26079964 - 26080046
Alignment:
Q  412 tttacttttcttttttaaattacagactata--taacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc 492  Q
    ||||| ||| |||||| ||||||||||||||  |||||| ||||| ||||||||||    |||||||||| ||||||||||||    
T  26079964 tttacctttttttttttaattacagactatatttaacatatttttttaaaataaatttaatgtgattgaaatattatatgatc 26080046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 492
Target Start/End: Original strand, 26103751 - 26103833
Alignment:
Q  412 tttacttttcttttttaaattacagactata--taacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc 492  Q
    ||||| ||| |||||| ||||||||||||||  |||||| ||||| ||||||||||    |||||||||| ||||||||||||    
T  26103751 tttacctttttttttttaattacagactatatttaacatatttttttaaaataaatttaatgtgattgaaatattatatgatc 26103833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 570
Target Start/End: Complemental strand, 30891165 - 30891034
Alignment:
Q  439 tatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaa----acatttcat 534  Q
    ||||||| |||||||| |||| ||||| |  ||||||||||||||||||| ||||||||||||   ||| | ||||  |||||||||    | |||| ||    
T  30891165 tatataatatgtttttttaaa-taaattaaatgtgattgaagtattatattatcgtttattatattaatat-ttaa--ttttaaaaaatatatattttat 30891070  T
Q  535 cgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
     |||||||||||||||||||||||| ||||| ||||    
T  30891069 agtgtccgtaatttaaaaatgaaaagtaaactctcc 30891034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 36267624 - 36267553
Alignment:
Q  539 tccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||||||| ||||| ||| |||||| ||| ||||||||| ||||||||  ||| |||||||||||    
T  36267624 tccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 609
Target Start/End: Complemental strand, 47390922 - 47390855
Alignment:
Q  543 taatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||| ||||| |||||||||| ||| ||||||||| ||| |||| |||| |||||||||||    
T  47390922 taatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 36267551 - 36267585
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  36267551 ttagggtgtgtttggatggagggtttaggagggga 36267585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 544 - 609
Target Start/End: Complemental strand, 40282263 - 40282197
Alignment:
Q  544 aatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||||||| |||||  ||||||||||||| ||||||||| |||||||| |||| ||||| |||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccct 40282197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 368 - 434
Target Start/End: Complemental strand, 41008425 - 41008359
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||||  ||||||||||||||||    || |||||| |||| ||||||||||||    
T  41008425 tttagggtgtgtttggatgcagggtttaggaggggaaggaagagtttacatttcatttttaaattac 41008359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 41496955 - 41496989
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  41496955 ttagggtgtgtttggatggagggtttaggagggga 41496989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 48015458 - 48015372
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataa 445  Q
    |||||| ||||| ||||||||| ||||| |||||||||||     || ||| | ||||||||| ||||||||||||||||| |||||    
T  48015458 atctttaagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagactttataa 48015372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 368 - 434
Target Start/End: Complemental strand, 48094130 - 48094069
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||||  ||| |||||||||||||     | |||||||||||||||||||||||    
T  48094130 tttagggtgtgtttggatgtaggatttaggaggggag-----gatttacttttcttttttaaattac 48094069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 48881556 - 48881590
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  48881556 ttagggtgtgtttggatggagggtttaggagggga 48881590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 48881631 - 48881558
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||||||||| ||||| ||| || ||| ||| ||||||||| ||||||||  ||| |||||||||||    
T  48881631 tgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 2e-70; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 371 - 591
Target Start/End: Original strand, 16652958 - 16653174
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| |||||||| |||||||    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||    
T  16652958 agggtgtgtttggattgagggttttggagggg----gagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagt 16653053  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||||||||||||||||||| ||  ||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||| |||||||||     
T  16653054 gtgattgaagtattatatgatcgtttattttgttaatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctct 16653153  T
Q  571 tctcacttcccctcttaaacc 591  Q
     ||| ||||||||||||||||    
T  16653154 cctcccttcccctcttaaacc 16653174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 368 - 593
Target Start/End: Complemental strand, 31543319 - 31543089
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||| ||| |||||||||||||||||     |  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaata 31543220  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||| | |||||||||||||||||||||| ||||||| |||  ||| ||||||| |||| ||||||||||||| || ||||||||||||||||||||| ||    
T  31543219 aattaagtgtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagta 31543120  T
Q  563 aaccctcctctcacttcccctcttaaaccct 593  Q
    |||||||| ||| ||||||||||||||||||    
T  31543119 aaccctcccctcccttcccctcttaaaccct 31543089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 377 - 593
Target Start/End: Original strand, 1281149 - 1281370
Alignment:
Q  377 tgtttggatcgagggtttaggagggga---gacgag--ggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtg 471  Q
    ||||||||| |||||||||||||||||   || |||  ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtg 1281248  T
Q  472 tgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcct 571  Q
    || |||||||||||||| |||||||||||||  ||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||| |||||     
T  1281249 tggttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaatcctccc 1281348  T
Q  572 ctcacttcccctcttaaaccct 593  Q
    ||| |||||  |||||||||||    
T  1281349 ctcccttcctatcttaaaccct 1281370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 407 - 570
Target Start/End: Complemental strand, 11575609 - 11575446
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||  ||    
T  11575609 gagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagtgtgattaaagtattatatgatcgtttatcatgttaa 11575510  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    | ||||||| |||||||||||||||||| || ||| |||||||| |||||||| ||||||||||    
T  11575509 tatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctcc 11575446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 368 - 565
Target Start/End: Original strand, 7979137 - 7979339
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||| ||||||||||| |||||||||| ||     |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7979137 tttaggatgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaata 7979236  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||||| |||  ||||||||||||||||||  ||||| |||  |||  ||||| ||||||| ||||||||||  |||||||||||||||||||||||| ||    
T  7979237 aatcaagtgcaattgaagtattatatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagta 7979336  T
Q  563 aac 565  Q
    |||    
T  7979337 aac 7979339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 403 - 611
Target Start/End: Complemental strand, 41103713 - 41103502
Alignment:
Q  403 agacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatg 502  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  41103713 agacgagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatg 41103614  T
Q  503 aaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaa--tttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatcta 599  Q
      | | | ||||  |||| |||||| |||||| |||||| |||  |||||||| |||||  ||||||||| ||| ||||||||| ||||||||  ||| |    
T  41103613 ttattgttttaatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccctccatcca 41103514  T
Q  600 aacacaccctta 611  Q
    ||||||||||||    
T  41103513 aacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 371 - 570
Target Start/End: Complemental strand, 1027092 - 1026889
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---gacg--agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||||||||||||||  ||||||||||| ||||   || |  |||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaat 1026994  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | || ||||||||||||||||||||||||||| |||  ||| ||||||| ||| | |||| ||||||| ||||||| |||||||||||||||| |||||    
T  1026993 taagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaac 1026894  T
Q  566 cctcc 570  Q
    |||||    
T  1026893 cctcc 1026889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 411 - 609
Target Start/End: Complemental strand, 3727054 - 3726863
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |  |||||||| |||||||||| ||||||| |        ||    
T  3727054 gtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattatatgaccgtttatca--------tg 3726963  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||  ||| |||||||||||    
T  3726962 ttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacaccct 3726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 366 - 570
Target Start/End: Complemental strand, 7503203 - 7502994
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaa 460  Q
    |||||||||||||||||||| |||| ||| |||||||||  |||||     |||||||||| |||||||||||  || ||||||||||||||||||||||    
T  7503203 cttttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaa 7503104  T
Q  461 taaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaa 560  Q
    ||||| | |||||||| |||||||||||||| |||||| |||  ||| ||||||| ||||| |||||||||||| || |  |||||||||||||| |||     
T  7503103 taaattaagtgtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaag 7503004  T
Q  561 taaaccctcc 570  Q
     |||||||||    
T  7503003 caaaccctcc 7502994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 417 - 609
Target Start/End: Original strand, 31738474 - 31738667
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacc 516  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||| | |||| ||||||||||||||||||| ||||| |||  ||| |||||||     
T  31738474 tttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 31738573  T
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
     || |||||| |||| || |||||||||||||||||||||||  |||||||||| ||  ||||||||| ||||||||  ||| |||||||||||    
T  31738574 cttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacaccct 31738667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 407 - 559
Target Start/End: Complemental strand, 30479920 - 30479768
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||| |||||||||||||| ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||| ||| ||||| |    ||    
T  30479920 gagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatcaagtgtgattgaagtattatattatcatttatcaccttaa 30479821  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    | ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  30479820 tatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaa 30479768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 368 - 593
Target Start/End: Original strand, 11033416 - 11033645
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga---gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaa 464  Q
    |||||||||||||||||| |||||||||| || |||   || | ||||||||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  11033416 tttagggtgtgtttggattgagggtttagaagaggaagggaggggggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaa 11033515  T
Q  465 tcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttt-aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    | |||||||||||||  ||||||||||||||||| |||  ||| ||||||  |||| ||||||||||||||  | | | |||||||||| |||||| |||    
T  11033516 ttatgtgtgattgaataattatatgatcgtttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaa 11033615  T
Q  564 accctcctctcacttcccctcttaaaccct 593  Q
    | | ||  ||| |||| |||| ||||||||    
T  11033616 atcttctcctcccttctcctcctaaaccct 11033645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 372 - 609
Target Start/End: Original strand, 11785537 - 11785770
Alignment:
Q  372 gggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtg 471  Q
    ||||||||||| ||   |||||||||||||||||     |||||||||||||||||||||||   |||||||||||||||||||||||||| || |  ||    
T  11785537 gggtgtgtttgaattccgggtttaggaggggaga-----gtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattg 11785631  T
Q  472 tgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcct 571  Q
     ||||||||||||||||| | |||||| |||  ||| || |||| |||||||||| |||||||  |||||||||||||||||||||||  |||||||||     
T  11785632 cgattgaagtattatatgtttgtttatcatgttaatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctccc 11785731  T
Q  572 ctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
     || ||| ||||| ||||||||  ||| |||||||||||    
T  11785732 ttctcttaccctcctaaaccctccatccaaacacaccct 11785770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 371 - 559
Target Start/End: Complemental strand, 9718723 - 9718530
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||| ||   |||||     ||||||||||||||||||||||   |||||||||||| ||||||||||||  ||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcat 9718624  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
     |  |||||||||||||||||||||| |||||| |||  ||| || |||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  9718623 taattgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 371 - 560
Target Start/End: Original strand, 6315066 - 6315256
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttc--ttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||||| |||||||||||||| || | |||||   | ||| |  |||||| |||||| |||||||||||||||||||||||||||||| |     
T  6315066 agggtgtgtttggattgagggtttaggaggcga-aggagggaggaatttacattttttttaattacggactatataacatgtttttctaaaataaattaa 6315164  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaa 560  Q
    ||||||||||||||||||| |||||||||| | |  ||| ||||||  |||| ||||||||||||| ||||||||| |||||||||||||||    
T  6315165 gtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaaa 6315256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 371 - 548
Target Start/End: Original strand, 37032390 - 37032561
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||| ||||||||| || ||||||||||||      || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | ||    
T  37032390 agggtttgtttggattgaaggtttaggaggg------agagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagt 37032483  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaattt 548  Q
    |||||| |||||||||||||| |||||| ||   ||| ||||||| |||||||||||| ||| | |||||||||||||    
T  37032484 gtgattaaagtattatatgatagtttatcatcttaatatgttaactttttaaaaaacacttcctagtgtccgtaattt 37032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 366 - 534
Target Start/End: Complemental strand, 42650580 - 42650409
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||| |||||||||| ||| |||||||| |||| |||   ||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  42650580 ctttttgggtgtgtttagattgagggtttgggagaggaagggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaat 42650481  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatg---aaaatttgttaaccttttaaaaaacatttcat 534  Q
     | ||||||||||||||||||||||| |||||| |||   || || ||||||| ||||| ||||||||||||    
T  42650480 taagtgtgattgaagtattatatgattgtttatcatgtataacatatgttaactttttataaaacatttcat 42650409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 369 - 580
Target Start/End: Original strand, 2248450 - 2248666
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    ||||||||||||||||| ||| |||||||||||||   |||||     || | ||| |||||||||||||| |  |||||||||||||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataa 2248549  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    |||| ||||||||| | |||||||||| ||||||  |||  |||  |||||| ||| |||||| ||||||| ||||||||||||||||||| |||| | |    
T  2248550 atcaagtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtga 2248649  T
Q  564 accctcctctcacttcc 580  Q
    ||||||| ||| |||||    
T  2248650 accctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 368 - 570
Target Start/End: Original strand, 28083739 - 28083946
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga---gacgaggg--tttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||| |||||||| |||| |||||||||||||||||   || ||| |  |||  |||||||||||||||||||||| ||||||||||||| |||||||||    
T  28083739 tttaaggtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaata 28083838  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||| | ||||||||| ||||||||||||| |||||| |||   |  |||||||  |||||||||||| |||| || ||||||||||||||| ||||  ||    
T  28083839 aattaagtgtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaagaaatcta 28083938  T
Q  563 aaccctcc 570  Q
    ||||||||    
T  28083939 aaccctcc 28083946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 423 - 565
Target Start/End: Complemental strand, 37923265 - 37923123
Alignment:
Q  423 tttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaa 522  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||| || |||||||||||| ||||| |||  ||| | |||||  |||||    
T  37923265 tttttaaattacagactatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaatattttaactctttaa 37923166  T
Q  523 aaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    |||||||||||| |||| | ||||||||||||||||| |||||    
T  37923165 aaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 37923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 412 - 565
Target Start/End: Original strand, 30664407 - 30664560
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    |||| |||||||||||||||| |||||| ||||||||||||||| ||||||||| | |||||||||||||||||||| | ||||||| ||   ||| |||    
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  512 taaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    |||| |||||||||| ||||  |  |||||||||||||||| ||||||||||||    
T  30664507 taactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaac 30664560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 369 - 526
Target Start/End: Original strand, 33922523 - 33922680
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||| ||||||||| |||||||||||| ||||   ||| |||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||       
T  33922523 ttagggtatgtttggattgagggtttaggaagggaagggagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaattta 33922622  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaa 526  Q
    || |||||||||||| ||||||| |||||| |||| ||| ||||||| ||||||||||    
T  33922623 gtatgattgaagtatgatatgattgtttatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 369 - 593
Target Start/End: Original strand, 36308850 - 36309070
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttc-taaaataaatca 467  Q
    |||||||||||||||||  ||||||| |||||||||     |||| | |||||||| ||||| || ||||||||||||||||||||  |||||||||  |    
T  36308850 ttagggtgtgtttggattaagggtttgggaggggag-----ggttcatttttctttgttaaactagagactatataacatgttttttataaaataaacta 36308944  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
     ||||||||||||||||||||||| |||||| |||  ||| |||| || ||| |||| | ||||||   ||| ||||||||||| ||||||| |||||||    
T  36308945 agtgtgattgaagtattatatgattgtttatcatgttaatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccc 36309044  T
Q  568 tcctctcacttcccctcttaaaccct 593  Q
    ||| ||| ||||||||| ||||||||    
T  36309045 tcccctcccttcccctcctaaaccct 36309070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 375 - 593
Target Start/End: Original strand, 10028114 - 10028350
Alignment:
Q  375 tgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatg 469  Q
    ||||||||||||||||||||||||||||| | ||||      ||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||| | |    
T  10028114 tgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaag 10028213  T
Q  470 tgtgattgaagtattatatgatcgtt-----tattatgaa-------aatttgttaaccttt-taaaaaacatttcatcgtgtccgtaatttaaaaatga 556  Q
    |||| ||||||| |||||||||||||     ||||| | |       ||| ||||||| |||  |||||| ||||||| ||||||||||||||||| | |    
T  10028214 tgtggttgaagtcttatatgatcgtttaccatattacggaccatattaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaa 10028313  T
Q  557 aaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||| |||||||||| ||||||||| ||| ||||||||    
T  10028314 aaagtaaaccctcccctcacttcctctcctaaaccct 10028350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 371 - 570
Target Start/End: Complemental strand, 40990427 - 40990221
Alignment:
Q  371 agggtgtgtttggatcgagggttt----aggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatc 466  Q
    ||||||||||||||| |||||||     |||| |||||  ||| ||||  |||||||||||||||||| ||||||||||||||||| | ||||||||||     
T  40990427 agggtgtgtttggattgagggttaggagaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaatt 40990328  T
Q  467 atgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttt--aaaaaacatttcatcgtgtccgt-aatttaaaaatgaaaaataa 563  Q
    | || |||||||||||||||||||||| |||| |||  ||| |||||||  |||  |||||||||||||| |||||  | |||| |||||||||| ||||    
T  40990327 aagtctgattgaagtattatatgatcgcttatcatgttaatatgttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataa 40990228  T
Q  564 accctcc 570  Q
    |||||||    
T  40990227 accctcc 40990221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 417 - 566
Target Start/End: Complemental strand, 29358532 - 29358384
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacc 516  Q
    ||||| |||||||| ||| || |||||||||| |||||||| ||||||| | ||||||||||||||||||| |||||||||| |||  ||| ||||||      
T  29358532 ttttcatttttaaactacggattatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-t 29358434  T
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
    |||||||||| |||| || ||||||||||||||||||| |||| ||||||    
T  29358433 ttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaacc 29358384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 564
Target Start/End: Original strand, 13405023 - 13405178
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgtt 512  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | | |||||| |||||||||||||||||| |||  |||  |||    
T  13405023 ttacttttcttttttaaataacagactatataacatgtttttctaaaataaattatatataattgaattattatatgatcgtttatcatgttaatacgtt 13405122  T
Q  513 a----accttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    |    || ||| |||||| ||||  |  ||||||||||||||||||||||| ||||    
T  13405123 aattcacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagtaaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 371 - 498
Target Start/End: Complemental strand, 12022387 - 12022255
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggt-----ttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| ||||||||||||||||| | |||||      | |||||| ||||||||||||| ||| || ||| |||||||| ||||||||||    
T  12022387 agggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaat 12022288  T
Q  466 catgtgtgattgaagtattatatgatcgtttat 498  Q
     | ||||  |||||||||||||||||| |||||    
T  12022287 taagtgtttttgaagtattatatgatcatttat 12022255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 374 - 492
Target Start/End: Complemental strand, 38198284 - 38198167
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtg 473  Q
    |||||||||||| |||||||| |||| |||   ||||  ||||||||| ||||||||||||||||  |||||  ||||||| |||||| ||| | |||||    
T  38198284 gtgtgtttggatggagggttttggagtggatgggaggacttacttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtg 38198186  T
Q  474 attgaagtattatatgatc 492  Q
    |||||||||||||||||||    
T  38198185 attgaagtattatatgatc 38198167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 371 - 566
Target Start/End: Complemental strand, 4247764 - 4247562
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---------gacgagggtttacttttctttttt-aaattacagactatataacatgtttttctaaaa 460  Q
    ||||||||||||||| || ||||||||||||||         || ||||||||||||||||||||| ||||||  || | ||| | |||||||| |||||    
T  4247764 agggtgtgtttggattgaaggtttaggaggggaagggaggtagaggagggtttacttttctttttttaaattat-gaat-tattatatgtttttttaaaa 4247667  T
Q  461 taaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaa 560  Q
    ||||| | || ||||| ||||||||||||||||||||| |||  ||| ||||||| | |||||||| |||| |  ||| ||||||||||||||| ||||     
T  4247666 taaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagtg-ccgtaatttaaaaataaaaag 4247568  T
Q  561 taaacc 566  Q
    ||||||    
T  4247567 taaacc 4247562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 374 - 498
Target Start/End: Complemental strand, 24243287 - 24243159
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggg----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatg 469  Q
    |||||||||||||||||||||| | |||    |||  ||||| ||||||| ||||| |||||||||||| |||| | || ||||| | |||| ||| | |    
T  24243287 gtgtgtttggatcgagggtttaagggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaag 24243188  T
Q  470 tgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||||||||||||| |||||    
T  24243187 tgtgattgaagtattatatgatcatttat 24243159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 2412962 - 2413028
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattaca 435  Q
    |||| |||||||||||| ||||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  2412962 ttagagtgtgtttggatggagggtttaggaggggaggggagggcttactattcttttttaaattaca 2413028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 509 - 611
Target Start/End: Original strand, 34634286 - 34634389
Alignment:
Q  509 tgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacc 607  Q
    ||||||| |||||||| | ||||||| ||||||||||||||||||| |||||| |||||||   || ||||||||| ||||| ||  ||| |||||||||    
T  34634286 tgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatccaaacacacc 34634385  T
Q  608 ctta 611  Q
    ||||    
T  34634386 ctta 34634389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 43732933 - 43732863
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||| |||||||||||||     |||||  ||||||||||||||||||||||||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattac 43732863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 417 - 565
Target Start/End: Complemental strand, 29691118 - 29690967
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttcta---aaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgtta 513  Q
    |||||||| ||||||||| |||||| |||||||||||| |    |||| | | | ||||||||||||||| |||||||||||||| |||  ||| |||||    
T  29691118 ttttctttattaaattacggactatttaacatgtttttttttttaaatgacttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgtta 29691019  T
Q  514 accttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    || |||| ||||| ||||| | || || |||  ||| ||||||||| |||||    
T  29691018 acttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaac 29690967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 35694915 - 35694870
Alignment:
Q  450 tttttctaaaataaatcatgtgtgattgaagtattatatgatcgtt 495  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgatcgtt 35694870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 43732858 - 43732931
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||||||||| ||||| |||||||||| ||| ||||||||| ||||||||  ||| |||||||||||    
T  43732858 tgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 31543244 - 31543316
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||| ||||||||||| ||||| |||||||||| ||| ||||||||| |||||||| |||| |||||||||||    
T  31543244 gtccataatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 488
Target Start/End: Original strand, 34633819 - 34633859
Alignment:
Q  448 tgtttttctaaaataaatcatgtgtgattgaagtattatat 488  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattatat 34633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 521 - 611
Target Start/End: Original strand, 8815296 - 8815387
Alignment:
Q  521 aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||| |  |||| |||||||||||||| |||| | |||||||| ||| || |||||| |||||||| |||| |||||||||||||    
T  8815296 aaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccctta 8815387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Original strand, 3726859 - 3726895
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3726859 ttttagggtgtgtttggatggagggtttaggagggga 3726895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 1026857 - 1026915
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaatt 432  Q
    ||||| ||||||||||| |||||||||||||||     ||||||||||||||| ||||||||||    
T  1026857 ttaggctgtgtttggatggagggtttaggaggg-----gagggtttacttttcatttttaaatt 1026915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 491
Target Start/End: Original strand, 27483595 - 27483685
Alignment:
Q  401 ggagacgagggtttacttttcttttttaaattacagactat-ataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgat 491  Q
    ||||| |||||  ||||||||| |||||||||||| | ||| |||| |||||||| | |||||||| | |||| ||||||||||||||||||    
T  27483595 ggagaggagggcatacttttctattttaaattacaaa-tatcataaaatgttttttttaaataaataaagtgttattgaagtattatatgat 27483685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 495
Target Start/End: Complemental strand, 36166287 - 36166205
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtt 495  Q
    ||||||||| |||| |||||||| |||  ||||| || |||||  ||||| ||||| ||||||||||| |||||||||||||||    
T  36166287 tttacttttattttataaattacggacattataaaatattttta-aaaatcaatcaagtgtgattgaactattatatgatcgtt 36166205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 1027020 - 1027094
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacaccctta 611  Q
    |||||||||||||||| ||||| | |||||| | ||| |||||| || ||||||| ||||| |||||||||||||    
T  1027020 gtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccctta 1027094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 459
Target Start/End: Complemental strand, 2482019 - 2481930
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaa 459  Q
    ||||||| ||||||||| |||||||||||||||||   ||||| |||| |||| |||||||||| | |||  ||||| |||||||| ||||    
T  2482019 ttagggtatgtttggatggagggtttaggaggggaagggagggcttacctttc-tttttaaatttccgacactataaaatgtttttttaaa 2481930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 8815139 - 8815173
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  8815139 ttagggtgtgtttggatggagggtttaggagggga 8815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 31738669 - 31738635
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  31738669 ttagggtgtgtttggatggagggtttaggagggga 31738635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 364 - 498
Target Start/End: Original strand, 34552560 - 34552693
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    |||| ||| ||| ||||||||| |||||||| ||| |||||   | || |||||||||| ||||||||||  |||  ||||  |||||||| |||||| |    
T  34552560 atctcttaaggtatgtttggatggagggttttggacgggagtgtatggcttacttttctcttttaaattattgacactatataatgttttt-taaaatta 34552658  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttat 498  Q
    || | | || ||||||||||||||||||| |||||    
T  34552659 attaagcgtaattgaagtattatatgatcatttat 34552693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 404
Target Start/End: Original strand, 9718489 - 9718522
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggag 404  Q
    ||||||||||||||| ||||||||||||||||||    
T  9718489 agggtgtgtttggatggagggtttaggaggggag 9718522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 415 - 492
Target Start/End: Complemental strand, 20472887 - 20472810
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc 492  Q
    |||||| |||||||||||||  || || |||  |||||||  ||||||||||| ||||  ||||||||||||||||||    
T  20472887 acttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatcaagtgtttttgaagtattatatgatc 20472810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 441 - 498
Target Start/End: Original strand, 27487065 - 27487122
Alignment:
Q  441 tataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||| ||||||||||||||  ||| | |||| ||||||||||||||||||| |||||    
T  27487065 tataaaatgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttat 27487122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 400
Target Start/End: Original strand, 30365126 - 30365159
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggagg 400  Q
    ||||||||||||||||||| ||||||||||||||    
T  30365126 ttttagggtgtgtttggattgagggtttaggagg 30365159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 566 - 614
Target Start/End: Complemental strand, 43732723 - 43732674
Alignment:
Q  566 cctcctctcacttcccctcttaaaccct-aatctaaacacacccttagtg 614  Q
    ||||||||| ||||||||| |||||||| |||| ||||||||||||||||    
T  43732723 cctcctctcccttcccctcctaaaccctcaatccaaacacacccttagtg 43732674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 2e-70; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 371 - 608
Target Start/End: Original strand, 13634711 - 13634954
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||     |  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaat 13634810  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     ||||||||||||| |||||||||||||||||| |||  ||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||| |    
T  13634811 tatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacc 13634910  T
Q  566 cctcctctcacttcccctcttaaaccct-aatctaaacacaccc 608  Q
    ||||| ||| ||||||||| |||||||| |||| ||||||||||    
T  13634911 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 371 - 558
Target Start/End: Original strand, 9856890 - 9857072
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| |||||||||||||||||||     ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||    
T  9856890 agggtgtgtttggattgagggtttaggaggggaga-----gtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagt 9856984  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaa 558  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  9856985 gtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 371 - 593
Target Start/End: Original strand, 7544136 - 7544363
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||| ||||     |  ||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaat 7544235  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    || ||||||||||||||||||||||| ||||||||||  ||| || |||| |||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  7544236 caagtgtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaac 7544335  T
Q  566 cctcctctcacttcccctcttaaaccct 593  Q
    ||||| ||  ||||||||| ||||||||    
T  7544336 cctccccttccttcccctcctaaaccct 7544363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 709 - 1002
Target Start/End: Complemental strand, 40752546 - 40752240
Alignment:
Q  709 atgaaaatgattttataattggttgtattcatgtaaatctaaaagcctcgagttcatattaacttgatagagaat----------tttctaaggtaa--t 796  Q
    ||||||||||||| | |||||| ||||||||||| ||  ||||||||| ||||||||||||||||||||||||||          || ||||||||   |    
T  40752546 atgaaaatgattt-acaattgggtgtattcatgtcaagataaaagcctagagttcatattaacttgatagagaatgatagagaatttcctaaggtatagt 40752448  T
Q  797 taccttcttttcaa--gacattgcaattttcatttgagttagtattcttttaacgttattcaagattnnnnnnnnngcacaacaccacctgtatcaccac 894  Q
    |||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||||||||         |||||||||||  ||||||||||     
T  40752447 tactcttttttcaaaagacatagcaattttcatgtgagttagtattcttttaacgttattcaagattaaaaaaaaagcacaacaccaattgtatcaccat 40752348  T
Q  895 ctaaagtacgccatattgcttctttaattttaggatgctatcatcacttcaatattaagatattaaataaactcacattgcaacattcaaactagtgttt 994  Q
     ||||||||| ||| | ||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  40752347 ataaagtacgtcatttcgcttctttaattttaagattctatcttctcttcaatattaagatattaaataaactaacattgcaacatttaaactagcgttt 40752248  T
Q  995 tgtttttg 1002  Q
    || |||||    
T  40752247 tgcttttg 40752240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 369 - 611
Target Start/End: Original strand, 16938477 - 16938725
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    ||||||||||||||||| |||||||||||||||||     |  ||||||||  ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataa 16938576  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    || | ||||||||||| |||||||||||| ||||| |||  ||  |||||||  ||||||||||||||||| ||||| |||||||||||||||||  |||    
T  16938577 attaagtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaa 16938676  T
Q  564 accctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||| |||  |||| ||| ||||||||  ||| |||||||||||||    
T  16938677 accctcccctccattcctctcctaaaccctccatccaaacacaccctta 16938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 371 - 570
Target Start/End: Original strand, 26414893 - 26415097
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagg-----ggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| ||||||||||||||     ||||  ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatat 26414992  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | ||||||||||||||||||||| |||||||| |||  ||| ||||||| ||||| |||||||||||| ||||| |||| ||||||||||||| |||||    
T  26414993 taagtgtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaac 26415092  T
Q  566 cctcc 570  Q
     ||||    
T  26415093 tctcc 26415097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 720 - 965
Target Start/End: Complemental strand, 40765028 - 40764781
Alignment:
Q  720 tttataattggttgtattcatgtaaatctaaaagcctcgagttcatattaacttgatagagaattttctaaggta-attaccttcttttc--aagacatt 816  Q
    ||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||  |||||||||||| ||| ||  ||||| |||||||  ||||||||    
T  40765028 tttataattgggtgtattcatgtaaagataaaagccttgagttcatattaactttttagagaattttcgaagatagtttaccctcttttcaaaagacatt 40764929  T
Q  817 gcaattttcatttgagttagtattcttttaacgttattcaagattnnnnnnnnngcacaacaccacctgtatcaccacctaaagtacgccatattgcttc 916  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||           |||||||||  ||||||||||| ||||||| ||||| | |||||    
T  40764928 gcaattttcatgtgagtt-gtattcttttagcgttattcaagattaaaaaaaaaatacaacaccaattgtatcaccacataaagtatgccatttcgcttc 40764830  T
Q  917 tttaattttaggatgctatcatcacttcaatattaagatattaaataaa 965  Q
    ||||||| |||||| ||||| || |||||||||||||||||||||||||    
T  40764829 tttaattctaggattctatcttctcttcaatattaagatattaaataaa 40764781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 368 - 584
Target Start/End: Complemental strand, 4373813 - 4373592
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagac-----gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| |||||||||||| |||| |      |||| ||||||||||||||||||||||| |||||||||||| ||||||  ||||||    
T  4373813 tttagggtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaata 4373714  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||| | ||||||||||| |||||||||||| ||||| |||  ||| ||||||| ||| |||||| ||||||  ||||||||||||||||||| |||| ||    
T  4373713 aattaagtgtgattgaaatattatatgatcatttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagta 4373614  T
Q  563 aaccctcctctcacttcccctc 584  Q
    ||| |||| ||| |||||||||    
T  4373613 aactctccactctcttcccctc 4373592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 395 - 609
Target Start/End: Original strand, 37606924 - 37607138
Alignment:
Q  395 aggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgt 494  Q
    |||| |||||| ||| ||||||||||| |||||||||||  |||||||||| |||||||| |||||||||| || |||||||||||||||||||||||||    
T  37606924 aggaagggagatgagagtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgt 37607022  T
Q  495 ttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct- 593  Q
    |||| |||  ||| ||||||| ||||| |||||||||||| || || ||| |||||||||||||| |||||| || |||| ||| ||||| ||||||||     
T  37607023 ttatcatgttaatatgttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctc 37607122  T
Q  594 aatctaaacacaccct 609  Q
     ||| |||||||||||    
T  37607123 catccaaacacaccct 37607138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 369 - 565
Target Start/End: Complemental strand, 9798853 - 9798657
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||| |||||  || |||||||| |||||   ||| ||||||||||||||| |||||||||| |||||||||||||||||| |||||||| |     
T  9798853 ttagggtgtgtgtggattaagagtttaggaagggagggaaggatttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaa 9798754  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     ||||||||||||||||||||||||||| | |||  ||  | || || |||||||||||||||| | || ||||||||||||||||||||| |||||    
T  9798753 ttgtgattgaagtattatatgatcgtttttcatgttaaaatattgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaac 9798657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 411 - 609
Target Start/End: Original strand, 37551453 - 37551649
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    ||||||||||| |||||||||||  |||||||||| | ||||||  ||||||||| |||||||||||||||||||||||||||||||| |||  ||| ||    
T  37551453 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37551551  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||| ||||| |||||||||||  ||||| ||| |||||||||||||| |||||| ||||||| ||| ||||| ||||||||  ||| |||||||||||    
T  37551552 ttaactttttataaaacatttca--gtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccct 37551649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 411 - 609
Target Start/End: Original strand, 37654283 - 37654479
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    ||||||||||| |||||||||||  |||||||||| | ||||||  ||||||||| |||||||||||||||||||||||||||||||| |||  ||| ||    
T  37654283 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37654381  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||| ||||| |||||||||||  ||||| ||| |||||||||||||| |||||| ||||||| ||| ||||| ||||||||  ||| |||||||||||    
T  37654382 ttaactttttataaaacatttca--gtgtctgtagtttaaaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacaccct 37654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 371 - 559
Target Start/End: Complemental strand, 20147114 - 20146917
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata-------- 462  Q
    ||||||||||||||| |||||||||||||||||   ||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||            
T  20147114 agggtgtgtttggattgagggtttaggaggggaagggagggtttacttttcatttttaaattacggattatat-acatgtttttctaaaataaattaagt 20147016  T
Q  463 --aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
      ||| | ||||||||||| ||||||||||||| |||| |||  ||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  20147015 gtaattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 395 - 609
Target Start/End: Original strand, 37779134 - 37779347
Alignment:
Q  395 aggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgt 494  Q
    |||| |||||| ||| ||||||||||| |||||||||||  |||||| ||| |||||||| |||||||||| || |||||||||||||||||||||||||    
T  37779134 aggaagggagatgagagtttacttttcgtttttaaattaaggactat-taa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgt 37779231  T
Q  495 ttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct- 593  Q
    |||| |||  ||| ||||||| ||||| |||||||||||| || || ||| |||||||||||||| |||||| || |||| ||| ||||| ||||||||     
T  37779232 ttatcatgttaatatgttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaagtaaaccatcatctccctttccctcgtaaaccctc 37779331  T
Q  594 aatctaaacacaccct 609  Q
     ||| |||||||||||    
T  37779332 catccaaacacaccct 37779347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 28279680 - 28279522
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgttttt-ctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaa 505  Q
    ||||||||||||||| |||||||||||  || |||||||||||||||| ||||||||||  | |||||||||||||||||||||||| ||||| |||  |    
T  28279680 gagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaagtgtgattgaagtattatatgatcatttatcatgtta 28279581  T
Q  506 atttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    || ||||||| ||||||||||||||||||  ||||| ||||||||||||||||| ||||    
T  28279580 atatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaa 28279522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 413 - 564
Target Start/End: Complemental strand, 16501988 - 16501836
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgttttt-ctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    |||||||| ||||||||||||| ||||||||| ||| ||||| ||||||||||||| |||||||| |||| |||||||||| |||||||||  ||| |||    
T  16501988 ttacttttattttttaaattacggactatatatcatattttttctaaaataaatcaagtgtgattaaagttttatatgatcatttattatgttaatatgt 16501889  T
Q  512 taaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    |||| ||| ||||||||||||||  ||||||||||||||||||||||| ||||    
T  16501888 taacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaa 16501836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 412 - 570
Target Start/End: Complemental strand, 10072845 - 10072687
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| |||  ||| |||    
T  10072845 tttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 10072746  T
Q  512 taaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||| |||||||||| ||||||| ||   |  |||||||| ||||||| ||||||||||    
T  10072745 taactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaaccctcc 10072687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 375 - 570
Target Start/End: Complemental strand, 2550592 - 2550392
Alignment:
Q  375 tgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatg 469  Q
    ||||||||||| |||||||||||||||||     |  |||||||||||||||||||||||  | | |||||||||||||||||||||| ||||||| | |    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacg 2550493  T
Q  470 tgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctc 569  Q
    |||||||||||||||||||||| |||||| ||| |   || | |   ||| ||||||||| |||| ||||| |||||||||||||||||| |||||||||    
T  2550492 tgtgattgaagtattatatgattgtttatcatgtattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaaccctc 2550393  T
Q  570 c 570  Q
    |    
T  2550392 c 2550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 418 - 566
Target Start/End: Complemental strand, 36392341 - 36392194
Alignment:
Q  418 tttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacct 517  Q
    |||| |||||||||||| |||||||||| || |||| |||||||| || | |||||||||||||||||||||||||||||| |||  ||| ||||||| |    
T  36392341 tttcgtttttaaattacggactatataatatatttt-ctaaaatagattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactt 36392243  T
Q  518 tttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
    |||| |||||||||||| ||||| |||||||||||||||||| ||||||    
T  36392242 tttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaacc 36392194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 411 - 593
Target Start/End: Original strand, 36363077 - 36363259
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    ||||| ||||||| |||||| |||  ||||||||||||||||||||||||||||||| |||| |||||||| |||||| || |||||| |||  ||| ||    
T  36363077 gtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagtgtcattgaagttttatatcattgtttatcatgctaatatg 36363176  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||||| || ||||| |||||| || || ||||||||||||||||||||| | ||| |||  ||| ||||||||| ||||||||    
T  36363177 ttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccct 36363259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 371 - 609
Target Start/End: Original strand, 10476026 - 10476272
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---gacgag--ggtttacttttcttttttaaa-ttacagactatata-acatgtttttctaaaataa 463  Q
    |||||||||||| || |||||||||||||||||   || |||  ||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataa 10476125  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    || | |||||||||||||||||||| ||||||||| ||   ||| ||||    |||| | ||| ||||||| |||  |||||||||||||| | || |||    
T  10476126 attaagtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaa 10476225  T
Q  564 accctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    || |||| ||| ||||||||| ||||||||  ||| |||||||||||    
T  10476226 acactcccctcccttcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 428 - 570
Target Start/End: Complemental strand, 8503017 - 8502875
Alignment:
Q  428 aaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaac 527  Q
    ||||||| |||||||||||||| ||||||||||||||| | |||||||||||||||||| | || || ||| ||   ||||||||||| ||||||||||     
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaat 8502918  T
Q  528 atttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||||||  ||||||||||||||||||||||| | ||||||||    
T  8502917 atttcataatgtccgtaatttaaaaatgaaaagtgaaccctcc 8502875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 448 - 564
Target Start/End: Complemental strand, 20513611 - 20513491
Alignment:
Q  448 tgtttttctaaaataaatcatgtgtgattgaagtattatat----gatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgt 543  Q
    ||||||| |||||||||| | ||||||||||||||||||||    |||||||||| |||| ||| ||||||| |||||||||||||||||| ||||| ||    
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgt 20513512  T
Q  544 aatttaaaaatgaaaaataaa 564  Q
    | |||||||||||||| ||||    
T  20513511 agtttaaaaatgaaaagtaaa 20513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 509 - 593
Target Start/End: Original strand, 1657956 - 1658040
Alignment:
Q  509 tgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||||    
T  1657956 tgttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccct 1658040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 11756876 - 11757009
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagac----gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaa 464  Q
    ||||| ||||||||||| ||||||||||||||||||      ||| ||||  |||| |||||||||||||  |||||||||||||||| |||||||||||    
T  11756876 ttaggatgtgtttggattgagggtttaggaggggagggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaa 11756975  T
Q  465 tcatgtgtgattgaagtattatatgatcgtttat 498  Q
    | | |||||||| ||||||||||||||| |||||    
T  11756976 ttaagtgtgattaaagtattatatgatcatttat 11757009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 441 - 564
Target Start/End: Complemental strand, 17024393 - 17024270
Alignment:
Q  441 tataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtc 540  Q
    ||||||||||||||||||||||||| | ||  |||||||||||||||||||||||| | |||  ||| || |||| ||||||| ||||||||||  ||||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtc 17024294  T
Q  541 cgtaatttaaaaatgaaaaataaa 564  Q
     | |||||||||||||||| ||||    
T  17024293 tgcaatttaaaaatgaaaagtaaa 17024270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 407 - 498
Target Start/End: Original strand, 40815338 - 40815428
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||||||| || ||||||    
T  40815338 gaggatttacttttcttttttaaattacagactatataacatgtttttataaaataaa-aaagtgtgattgaaatattatataattgtttat 40815428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 509 - 612
Target Start/End: Complemental strand, 14245189 - 14245085
Alignment:
Q  509 tgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacc 607  Q
    ||||||| || ||||||||||||||  |||||||||||||||||| ||||| |||| ||||| ||| ||||||||| |||||||| |||| |||||||||    
T  14245189 tgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacacc 14245090  T
Q  608 cttag 612  Q
    |||||    
T  14245089 cttag 14245085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 522 - 609
Target Start/End: Original strand, 14245202 - 14245290
Alignment:
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||| |||| |||||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 374 - 490
Target Start/End: Original strand, 14681473 - 14681593
Alignment:
Q  374 gtgtgtttggatcgagggtttaggagggga--gacgag--ggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatg 469  Q
    |||||||||||| |||||||||||||||||  || | |  |||| | ||||||||||||||||||||| |||||||||||||||| |||||||||| |      
T  14681473 gtgtgtttggattgagggtttaggaggggaaggaagtgatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaattaaa 14681572  T
Q  470 tgtgattgaagtattatatga 490  Q
    ||||||||||| | |||||||    
T  14681573 tgtgattgaaggaatatatga 14681593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 653 - 861
Target Start/End: Complemental strand, 40752774 - 40752563
Alignment:
Q  653 tttggttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaaatgaaaa-tgattttataattggttgtattcatgtaaatctaaa 751  Q
    |||||||||||| |||||||  | | ||||||||||||||| | ||| |||| |||||| ||| |||||| ||| || | | |||||||| ||| | |||    
T  40752774 tttggttcttgaataaattaaccatataaaataaattttggttaaaaataatttaaatgtaaactgattt-atattttgatttattcatgcaaagcaaaa 40752676  T
Q  752 agcctcgagttcatattaac-ttgatagagaattttctaaggtaatt-accttcttttcaa-gacattgcaattttcatttgagttagtattcttttaac 848  Q
    |||||| |||||||| |||  ||||||  |||||| |||||||| || ||| |||  | || ||||||||| || |||| ||||||||||||||||||||    
T  40752675 agcctcaagttcatactaaagttgatattgaatttcctaaggtactttaccatctaataaaagacattgcatttatcatgtgagttagtattcttttaac 40752576  T
Q  849 gttattcaagatt 861  Q
    |||||||||||||    
T  40752575 gttattcaagatt 40752563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 371 - 500
Target Start/End: Original strand, 10204576 - 10204710
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||||||||||||||||||||||||||||||||     |  ||||| | |||||| |||||||||||||  || || ||| |||| ||| ||||||||||    
T  10204576 agggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaat 10204675  T
Q  466 catgtgtgattgaagtattatatgatcgtttatta 500  Q
     | ||||  |||||||||||||||||| |||||||    
T  10204676 taagtgtttttgaagtattatatgatcatttatta 10204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 609 - 770
Target Start/End: Complemental strand, 40765930 - 40765769
Alignment:
Q  609 ttagtgtgttcagcattgggttattgttttaagctgccataaaatttggttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaa 708  Q
    |||| ||||||| ||||| || ||| ||||||| || | ||||||||||||||||| ||||||| |||||||||||||||||| | | ||| |||  |||    
T  40765930 ttagggtgttcaacattgtgtaattattttaagttgtcgtaaaatttggttcttgaataaattaatcgtgtaaaataaattttagttaaaaataacttaa 40765831  T
Q  709 atg-aaaatgattttataattggttgtattcatgtaaatctaaaagcctcgagttcatattaa 770  Q
    ||| ||| ||| |||||| || | |||||||||| | | | ||| ||||||||||||||||||    
T  40765830 atgtaaactga-tttatatttagatgtattcatgcagagcaaaatgcctcgagttcatattaa 40765769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 369 - 438
Target Start/End: Original strand, 40305668 - 40305737
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagac 438  Q
    ||||||||||||||||| |||||||||||||||||   ||||| ||| ||||||||||||||||||||||    
T  40305668 ttagggtgtgtttggatggagggtttaggaggggaagggagggcttagttttcttttttaaattacagac 40305737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 654 - 827
Target Start/End: Complemental strand, 40751882 - 40751708
Alignment:
Q  654 ttggttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaaatg-aaaatgattttataattggttgtattcatgtaaatctaaaa 752  Q
    ||||||||||| |||||||  |||| ||||||||| | |||| ||| |||| |||||  |||||||||| ||| || | ||||| |||| ||| ||||||    
T  40751882 ttggttcttgaataaattaaccgtgcaaaataaatct-ggctaaaaataatttaaatctaaaatgattt-atatttagatgtatccatgcaaagctaaaa 40751785  T
Q  753 gcctcgagttcatattaacttgatagagaattttctaaggtaattaccttcttttc--aagacattgcaattttcat 827  Q
    ||||  ||||||||||||||||| | |||||||||||||||  || || |||||||  |||||| ||||||||||||    
T  40751784 gcctgaagttcatattaacttgacatagaattttctaaggtggttgccatcttttcaaaagacaatgcaattttcat 40751708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 417 - 498
Target Start/End: Original strand, 42681504 - 42681585
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||| |   |||||||| ||||||||||||||| |||||    
T  42681504 ttttttttttttaattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattatatgatcatttat 42681585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 11419360 - 11419306
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaat 11419306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 365 - 503
Target Start/End: Original strand, 20409659 - 20409796
Alignment:
Q  365 tcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaa 464  Q
    ||||||||||| ||||||||| |||||||| |||||||||  ||||| ||||||||||| |||||| | | |||  ||||| ||||| ||  ||||| ||    
T  20409659 tcttttagggtatgtttggatggagggttttggaggggaggggagggcttacttttcttgtttaaagtgcggaccctataaaatgttgtt-gaaaatgaa 20409757  T
Q  465 tcatgtgtgattgaagtattatatgatcgtttattatga 503  Q
    | | |||||||| ||||| | ||||||||||||| ||||    
T  20409758 ttaagtgtgatttaagtactttatgatcgtttatcatga 20409796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 417 - 479
Target Start/End: Original strand, 22022901 - 22022963
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaa 479  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||| | |||||||||||    
T  22022901 tttttttttttaaattacggactatataacatatttttctaaaataaattaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 732 - 827
Target Start/End: Complemental strand, 40750505 - 40750408
Alignment:
Q  732 tgtattcatgtaaatctaaaagcctcgagttcatattaacttgatagagaattttctaaggtaattaccttcttttc--aagacattgcaattttcat 827  Q
    |||||||||||||| ||||||||||||| || ||||||  |||| | |||||||||||||||  ||||||| |||||  |||||| ||||||||||||    
T  40750505 tgtattcatgtaaagctaaaagcctcgaatttatattactttgacatagaattttctaaggtggttaccttgttttcaaaagacaatgcaattttcat 40750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 957 - 1003
Target Start/End: Complemental strand, 40764414 - 40764368
Alignment:
Q  957 ttaaataaactcacattgcaacattcaaactagtgttttgtttttgt 1003  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  40764414 ttaaataaactcacagtgcaacattcaaactagtgttttgtttttgt 40764368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 593
Target Start/End: Original strand, 11757073 - 11757130
Alignment:
Q  536 gtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    |||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||    
T  11757073 gtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccct 11757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 810
Target Start/End: Complemental strand, 40763846 - 40763691
Alignment:
Q  654 ttggttcttgactaaattactcgtgtaaaataaattttggctgaaagtaatctaaatg-aaaatgattttataattggttgtattcatgtaaatctaaaa 752  Q
    ||||||||||| |||||||  |||| ||||| ||| ||| || ||| |||| |||||  |||||||||| ||| || | ||||||||| |||| ||||||    
T  40763846 ttggttcttgaataaattaaccgtgcaaaattaatcttg-ctaaaaataatttaaatctaaaatgattt-atatttagatgtattcatataaagctaaaa 40763749  T
Q  753 gcctcgagttcatattaacttgatagagaattttctaaggtaattaccttcttttcaa 810  Q
    ||||  ||||||||||||||||| | |||||||||||||||  || || |||||||||    
T  40763748 gcctgaagttcatattaacttgacatagaattttctaaggtggttgccatcttttcaa 40763691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 538 - 612
Target Start/End: Complemental strand, 26414965 - 26414890
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    |||||||||||||||| ||||| |||||||||| ||| |||| |||| |||||||| |||| ||||||||||||||    
T  26414965 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacacccttag 26414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 370 - 488
Target Start/End: Complemental strand, 14684729 - 14684604
Alignment:
Q  370 tagggtgtgtttggatcgagggtttaggagggg-----agacgagggtttacttttcttttttaaattacagactatataacatg--tttttctaaaata 462  Q
    ||||||||||||||||  |||||||||||||||     ||| ||||| ||||||||||||||| |||||| | | |||||| |||  ||||| | |||||    
T  14684729 tagggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttttttaaata 14684630  T
Q  463 aatcatgtgtgattgaagtattatat 488  Q
    ||| | ||||||||||| ||||||||    
T  14684629 aattaagtgtgattgaaatattatat 14684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 371 - 492
Target Start/End: Complemental strand, 15986868 - 15986742
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||     || ||||| | |||||| |||||||||||||  || || ||| |||| ||| ||||||||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaat 15986769  T
Q  466 catgtgtgattgaagtattatatgatc 492  Q
     | ||||  || |||||||||||||||    
T  15986768 taagtgtttttaaagtattatatgatc 15986742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 732 - 827
Target Start/End: Complemental strand, 40762511 - 40762414
Alignment:
Q  732 tgtattcatgtaaatctaaaagcctcgagttcatattaacttgatagagaattttctaaggtaattaccttctttt--caagacattgcaattttcat 827  Q
    |||||||||||||| ||||||||||||| || ||||||  |||| | |||||||||||||||  ||||||| ||||   |||||| ||||||||||||    
T  40762511 tgtattcatgtaaagctaaaagcctcgaatttatattactttgacatagaattttctaaggtggttaccttgtttttaaaagacaatgcaattttcat 40762414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 517 - 609
Target Start/End: Original strand, 2183965 - 2184058
Alignment:
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||| ||||||| ||  ||||||||||||||| | ||||||||| ||||| |||  ||||||||||||||||||  ||| |||||||||||    
T  2183965 ttttaaataacattttataatgtccgtaatttaaagaggaaaaataagccctcttctatcttcccctcttaaaccctccatccaaacacaccct 2184058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 40755250 - 40755142
Alignment:
Q  106 aaaagttgtttatttatgaagattaaatcatgtaagatcatttaacttaacatgggtataaatgaaccaacaactatgtttcatatacaaaattaaatgt 205  Q
    |||||||||| || ||| ||||| |||||| ||  ||||||| |||||||| |||||||||||||||| |||||||||||| ||| || |||  ||||||    
T  40755250 aaaagttgttcatatataaagat-aaatcaagtttgatcattcaacttaacgtgggtataaatgaaccgacaactatgttttataaaccaaacgaaatgt 40755152  T
Q  206 caagtgcatt 215  Q
     || ||||||    
T  40755151 taaatgcatt 40755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 483
Target Start/End: Original strand, 10650470 - 10650546
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtat 483  Q
    |||| |||||||||  |||||||||||| |||  ||| | ||||||||||||||||||| | |||||||||||||||    
T  10650470 gaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaagtat 10650546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 537 - 611
Target Start/End: Complemental strand, 11437012 - 11436937
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||||||||| | ||| ||| |||||||||| ||||||||| |||||||| |||| |||||| ||||||    
T  11437012 tgtccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacacgccctta 11436937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 486
Target Start/End: Original strand, 13298271 - 13298386
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| ||  ||||| ||||||||  |||   |||||||||||||||||||| | ||| |||||| | ||||||  || |||||| | ||    
T  13298271 agggtgtgtttggattgaatgtttaagaggggaggggagaacttacttttcttttttaaattgcggacaatataaaacgtttttgcaatataaattaagt 13298370  T
Q  471 gtgattgaagtattat 486  Q
    |||||| |||||||||    
T  13298371 gtgatttaagtattat 13298386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 22023483 - 22023573
Alignment:
Q  482 attatatgatcgtttattatgaaaatttgttaacctttt-aaaaaacatttcatcg-tgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||||||| |||  ||| ||||||| |||| ||||||||||||||   | ||||||||||| ||||||||| ||||||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaaccctcc 22023573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 29002344 - 29002246
Alignment:
Q  472 tgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||||| |||||||||||||||||||| |||  ||| ||||    ||  ||||||||||| || |||| | ||||||||||||||||| ||||||||||    
T  29002344 tgattgtagtattatatgatcgtttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatgaaaagtaaaccctcc 29002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 14684639 - 14684728
Alignment:
Q  521 aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||| ||  || |||||||| ||||| ||||| ||| |||||||||| || |||||| |||||||| |||| |||||||||||    
T  14684639 aaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacaccct 14684728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 611
Target Start/End: Original strand, 20147048 - 20147116
Alignment:
Q  539 tccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||||||||||||| ||||||||||     ||||||||| |||||||| |||| |||||||||||||    
T  20147048 tccgtaatttaaaaatgaaaagtaaaccctcc-----cttcccctcctaaaccctcaatccaaacacaccctta 20147116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 22023605 - 22023545
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||| |||||||||||||||     ||||||||||||||| ||| ||||||||    
T  22023605 ttagggtgtgtttggatggagggtttaggaggg-----gagggtttacttttcatttataaattac 22023545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 40766159 - 40766118
Alignment:
Q  142 atcatttaacttaacatgggtataaatgaaccaacaactatg 183  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  40766159 atcattcaacttaacgtgggtataaatgaaccaacaactatg 40766118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 522 - 570
Target Start/End: Complemental strand, 10650517 - 10650469
Alignment:
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||| ||||||||||||||||||| |||| |||| |||||    
T  10650517 aaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcc 10650469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 43405 - 43464
Alignment:
Q  395 aggaggggagacgagggtttacttttcttttttaaattacagactatataacatgttttt 454  Q
    |||| |||||| |||| ||||||| ||||||||||||||  || ||||||||||||||||    
T  43405 aggaagggagatgaggatttacttctcttttttaaattagggattatataacatgttttt 43464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 612
Target Start/End: Complemental strand, 7544208 - 7544133
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    |||||||||||||||| ||||| | | |||||| ||| |||||| || |||||||| |||| ||||||||||||||    
T  7544208 gtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacacccttag 7544133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 403
Target Start/End: Complemental strand, 10476275 - 10476240
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga 403  Q
    |||||||||||||||||| |||||||||||||||||    
T  10476275 tttagggtgtgtttggatggagggtttaggagggga 10476240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 5688636 - 5688602
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  5688636 ttagggtgtgtttggattgagggtttaggagggga 5688602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 366 - 400
Target Start/End: Original strand, 10043005 - 10043039
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggagg 400  Q
    ||||||||||||||||| |||||||||||||||||    
T  10043005 cttttagggtgtgtttgaatcgagggtttaggagg 10043039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 11436939 - 11437017
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatata 444  Q
    |||| |||||||||| |||||||||||||||||     || ||||| ||||||| |||||||||||||| ||| |||||    
T  11436939 agggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatata 11437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 14245292 - 14245258
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  14245292 ttagggtgtgtttggattgagggtttaggagggga 14245258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 433
Target Start/End: Original strand, 29002220 - 29002273
Alignment:
Q  375 tgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaatta 433  Q
    ||||||||||| |||||||||||||||     ||||||||||||||| |||||||||||    
T  29002220 tgtgtttggatggagggtttaggaggg-----gagggtttacttttcatttttaaatta 29002273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 36392321 - 36392395
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||| |||| |||||| | || ||| ||||||||| |||||||| |||| |||||| ||||||    
T  36392321 gtccgtaatttaaaaacgaaatataaacacaccgctctcttcccctcctaaaccctcaatccaaacacgccctta 36392395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 37551651 - 37551577
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacagac 438  Q
    ||||||||||||||||| ||||||||| |||     |||||| || |||||||||||| |||||||| |||||||    
T  37551651 ttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagac 37551577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 438
Target Start/End: Complemental strand, 37654481 - 37654407
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacagac 438  Q
    ||||||||||||||||| ||||||||| |||     |||||| || |||||||||||| |||||||| |||||||    
T  37654481 ttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaactacagac 37654407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 2184063 - 2184026
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  2184063 cttttagggtgtgtttggatggagggtttaagagggga 2184026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 407 - 488
Target Start/End: Original strand, 5688454 - 5688535
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatat 488  Q
    ||||||| |||||| |||||||||||||  || || ||| |||||||| ||||||| || | ||||  ||||||||||||||    
T  5688454 gagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatat 5688535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 613
Target Start/End: Original strand, 15986799 - 15986872
Alignment:
Q  541 cgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttagt 613  Q
    |||||||||||||  |||| | | |||||||||  ||||||||| |||||||| |||| |||||||||||||||    
T  15986799 cgtaatttaaaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatccaaacacacccttagt 15986872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 369 - 437
Target Start/End: Complemental strand, 37607140 - 37607067
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacaga 437  Q
    ||||||||||||||||| ||||||||| |||     |||||| || |||||||||||| |||||||| ||||||    
T  37607140 ttagggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaaatacaga 37607067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 369 - 437
Target Start/End: Complemental strand, 37779349 - 37779276
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacaga 437  Q
    ||||||||||||||||| ||||||||| |||     |||||| || |||||||||||| |||||||| ||||||    
T  37779349 ttagggtgtgtttggatggagggtttacgagggaaagggagatgatggtttacttttcatttttaaactacaga 37779276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 423 - 496
Target Start/End: Complemental strand, 39966139 - 39966066
Alignment:
Q  423 tttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgttt 496  Q
    |||||||||||| || |||||||||| ||||| | |||||||| |   ||||||||| ||||||||||| ||||    
T  39966139 tttttaaattacggattatataacatattttttttaaataaattaaacgtgattgaattattatatgattgttt 39966066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 40752926 - 40752810
Alignment:
Q  260 atctttccaaaacatgttacaattaatttcaagttttaacacaacacacatggtaaattacattttacgtattaaggaataatttatagttgtgcctaca 359  Q
    |||||| ||||| || ||||||  ||||| |||||||  |||||||||| |  ||||||| |||| ||  || |||||||||||| | ||| || || ||    
T  40752926 atcttttcaaaagatattacaaacaattttaagttttggcacaacacacttactaaattaaatttgacacat-aaggaataatttcttgttttgactcca 40752828  T
Q  360 atttatcttttagggtgt 377  Q
    ||||||||||||||||||    
T  40752827 atttatcttttagggtgt 40752810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 5e-68; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 369 - 611
Target Start/End: Original strand, 23748103 - 23748341
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||||||||||||||||||||||||||     |||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||     
T  23748103 ttagggtgtgtttggatcgagggtttaggaggggag-----ggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaa 23748197  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccct 568  Q
    |||||||||||||||||||| ||||||||| |||  ||| ||||||| |||||||| ||||||||| ||||||||| |||||||||||||| | ||||||    
T  23748198 gtgtgattgaagtattatattatcgtttatcatgttaatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccct 23748297  T
Q  569 cctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    || ||| ||||||||| ||||||||  ||| |||||||||||||    
T  23748298 cccctcccttcccctcctaaaccctccatccaaacacaccctta 23748341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 371 - 570
Target Start/End: Complemental strand, 15224938 - 15224734
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||||||||||||||| ||||||||||||||||   |||||     ||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaat 15224839  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||||||||||||||||||||| ||||| |||  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  15224838 taagtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 15224739  T
Q  566 cctcc 570  Q
     ||||    
T  15224738 actcc 15224734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 369 - 611
Target Start/End: Complemental strand, 36347787 - 36347539
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga---gacg--agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    ||||||||||||||||| |||||||||||||||||   || |  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataa 36347688  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    || | |||||||||||||||||||| || |||||| |||  ||| |||||||  ||||||||| || |||| || |||||||| |||||||||||| | |    
T  36347687 attaagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtga 36347588  T
Q  564 accctcctctcacttcccctcttaaaccc-taatctaaacacaccctta 611  Q
    || |||   || ||||||||| ||||||| | ||| |||||||||||||    
T  36347587 actctctcttcccttcccctcctaaacccttcatccaaacacaccctta 36347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 374 - 570
Target Start/End: Complemental strand, 19567057 - 19566860
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtg 473  Q
    |||||||||||| ||||||||||||| ||||  ||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  19567057 gtgtgtttggattgagggtttaggagaggaggggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaagtgtg 19566958  T
Q  474 attgaagtattatatgatcgtttattatgaaaatttgttaacctttt-aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||||||||||||| || ||||||| ||   ||| || |||| |||| |||||||||||||| ||||| ||||||||||| ||| || ||||||||||    
T  19566957 attgaagtattatacgaccgtttatcattttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccctcc 19566860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 373 - 593
Target Start/End: Complemental strand, 36046443 - 36046221
Alignment:
Q  373 ggtgtgtttggatcgagggtttaggaggggagacgaggg----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||| ||||||||| |||||||   |||||    ||||||||| ||||||||||||| ||| |||||||||| |||| ||||||||||  |    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggaggtttacttttgttttttaaattacggacgatataacatgcttttataaaataaat--t 36046346  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccct 568  Q
    | |||||||||||||||| ||||| ||||  |||  ||| ||||||| |||||||||||||||  | |||||||||||||||||||||||||||||| ||    
T  36046345 gagtgattgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactct 36046246  T
Q  569 cctctcacttcccctcttaaaccct 593  Q
    || |||| |||||||| ||||||||    
T  36046245 cccctcatttcccctcctaaaccct 36046221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 412 - 570
Target Start/End: Complemental strand, 39732926 - 39732769
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||| |||  ||| |||    
T  39732926 tttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagtatgattgaagtattatatgatcgtttatcatgttaatatgt 39732828  T
Q  512 taaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||| ||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  39732827 taactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccctcc 39732769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 376 - 590
Target Start/End: Complemental strand, 8427110 - 8426899
Alignment:
Q  376 gtgtttggatcgagggtttaggaggg-----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    |||||||||| |||||||||||||||     |||  ||| ||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| | ||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagt 8427011  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    | |||||||||||||||||||| ||||| |        ||||||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||||||    
T  8427010 gcgattgaagtattatatgatcatttatca--------tgttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcc 8426919  T
Q  571 tctcacttcccctcttaaac 590  Q
      || ||||||||| |||||    
T  8426918 cttcccttcccctcctaaac 8426899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 374 - 549
Target Start/End: Original strand, 12541773 - 12541949
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacat-gtttttctaaaataaatcatgtgt 472  Q
    |||||||||||| ||||||||||||||||||  ||| || ||||||||||||||||||||| |||||||||| ||  |||||||||||||||| | |||     
T  12541773 gtgtgtttggattgagggtttaggaggggaggggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaattaagtgc 12541872  T
Q  473 gattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaattta 549  Q
    |||||||||| ||||||||||||||| |||  ||| ||||||| ||||||||||||||| || || || ||||||||    
T  12541873 gattgaagtactatatgatcgtttatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattta 12541949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 410 - 611
Target Start/End: Original strand, 9631601 - 9631806
Alignment:
Q  410 ggtttacttttcttttttaaattacagactatataacatgtttttcta---aaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||| |    |||||||||| |||||| ||||||||||||| ||||||||| |||  ||    
T  9631601 ggtttacttttcttttttaaactatcgactatataacatgtttttttttttaaataaatcaagtgtgaatgaagtattatattatcgtttatcatgttaa 9631700  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacaca 605  Q
    | ||||||| |||||||  ||||||||| |||||||||||||||||| ||||| | ||||||| |||| ||| ||||| ||||||||  ||| |||||||    
T  9631701 tatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacaca 9631800  T
Q  606 ccctta 611  Q
    ||||||    
T  9631801 ccctta 9631806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 365 - 593
Target Start/End: Complemental strand, 31796014 - 31795786
Alignment:
Q  365 tcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaa 464  Q
    ||||||||||| ||||||||| || ||||||||||||||   ||||| ||| ||||||||| ||||| || || || ||||||||||||| |||||||||    
T  31796014 tcttttagggtttgtttggattgaaggtttaggaggggaagggagggattaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaa 31795915  T
Q  465 tcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    | | |||||||||||||||||||||||||||||| |||    | | |||   ||| ||||||| |||||| |||||||||||||||||| ||||| |||     
T  31795914 ttaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaag 31795815  T
Q  565 ccctcctctcacttcccctcttaaaccct 593  Q
     ||||| ||| |||| |||| ||||||||    
T  31795814 tcctcccctcccttcacctcataaaccct 31795786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 417 - 593
Target Start/End: Original strand, 40022421 - 40022600
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgttta--ttatgaaaatttgttaa 514  Q
    |||| ||||||||||||   |||||||||||||||||| |||||||||| | ||||||||||||||||||||||| |||||   ||| | ||| |||| |    
T  40022421 tttttttttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgttta 40022520  T
Q  515 cctttt-aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    | |||| |||||||||||||| ||||| |||||||||||||||||  |||||||||| ||| |||| |||||||||||||    
T  40022521 ctttttaaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccct 40022600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 407 - 570
Target Start/End: Original strand, 39821710 - 39821873
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||||||||| |||||||||||  || | ||||||||||||||||||||||||| | ||| |||| |||||||||| |||| ||||| |||  ||    
T  39821710 gagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgttaa 39821809  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    | |||||||  |||||| |  ||||||| |||||||||||||||||| ||||| ||||||||||    
T  39821810 tatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaaccctcc 39821873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 439 - 565
Target Start/End: Original strand, 16565850 - 16565976
Alignment:
Q  439 tatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtg 538  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||    || ||||||| ||||||||||| |||||| ||     
T  16565850 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaactttttaaaaaacgtttcatagta 16565949  T
Q  539 tccgtaatttaaaaatgaaaaataaac 565  Q
    |||||||||||||||| |||| |||||    
T  16565950 tccgtaatttaaaaataaaaagtaaac 16565976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 411 - 553
Target Start/End: Complemental strand, 28262642 - 28262500
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |  |||||||||| ||||| |||||||||||| |||  | | |     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaa 553  Q
    ||||| |||||||||| ||||||| |||| | |||||||||||    
T  28262542 ttaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 407 - 568
Target Start/End: Original strand, 9427026 - 9427188
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||  ||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||| ||||||||||||||||||| | |||||| |||  ||    
T  9427026 gagggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaaattatgcgtgattgaagtattatatgtttgtttatcatgctaa 9427125  T
Q  507 tttgttaacctt-ttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccct 568  Q
    | || |||| ||   ||||||||||| || ||||||||||||||||||||||||  |||||||    
T  9427126 tatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaatcaaaccct 9427188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 35736172 - 35736302
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| |||||||||||||||||     |  ||||| ||| ||||||||||||||| || ||||| |||||||||||||||||||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaata 35736271  T
Q  463 aatcatgtgtgattgaagtattatatgatcg 493  Q
    ||| | |||||| ||||||||||||||||||    
T  35736272 aatgaagtgtgactgaagtattatatgatcg 35736302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 374 - 569
Target Start/End: Complemental strand, 36567093 - 36566891
Alignment:
Q  374 gtgtgtttggatcgagggtttaggagggga---gacgag--ggtttactttt-cttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    |||||||||||| |||||||||||||||||   || |||  | ||||||||| | |||||||||||   | ||||||||||||||||||| ||||||| |    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttta-aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
      ||||||||||||||||||||||| ||||| |||  ||| ||||||| ||||| |||||  ||||||  ||||||||||||||||||||||| |||| |    
T  36566993 attgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagtaaatc 36566894  T
Q  567 ctc 569  Q
    |||    
T  36566893 ctc 36566891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 417 - 554
Target Start/End: Complemental strand, 37740085 - 37739949
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgttttt-ctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaac 515  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||  ||| | |||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  516 cttttaaaaaacatttcatcgtgtccgtaatttaaaaat 554  Q
     |||| ||||||  ||||| |||| |||||||| |||||    
T  37739985 tttttgaaaaac--ttcatagtgttcgtaattttaaaat 37739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 451 - 548
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  451 ttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaattt 548  Q
    ||||||||||||||| | ||||||||| ||||||||||||| |||||| |||  ||| || |||| |||||||||||||||||| |||||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 407 - 498
Target Start/End: Original strand, 886959 - 887048
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||| ||||||||||||||||||||||| |  |||||| ||| |||| |||||||||| |||||||||||||||||||||||||| |||||    
T  886959 gagggcttacttttcttttttaaattacaca--atataaaatgcttttttaaaataaattatgtgtgattgaagtattatatgatcatttat 887048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 469 - 565
Target Start/End: Complemental strand, 42316905 - 42316809
Alignment:
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    |||||||||||||||||||||||||||||| |||  |||  |||||| |||||||||||||||||| ||||  | |||||||||||||||| |||||    
T  42316905 gtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaac 42316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 411 - 570
Target Start/End: Original strand, 2241455 - 2241622
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||||||||| | || |||||||| |||||||||| | ||||||||||||||||| | |||| |||||||||||||||||| |||||| |||  ||| ||    
T  2241455 gtttacttttttattataaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattatatgattgtttatcatgttaatatg 2241554  T
Q  511 ttaaccttt--------taaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||  |||         |||||||||| ||| | |||| ||||||||||||||||||||||| ||||    
T  2241555 ttaaattttaaaaaaaaaaaaaaacattccatagcgtccataatttaaaaatgaaaaataaactctcc 2241622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 411 - 553
Target Start/End: Complemental strand, 39354373 - 39354231
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||||||||| ||||||||||||||   |||||||||||||| |||||||||||    ||||||||||||||||| ||||||| ||||||||  | | |     
T  39354373 gtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgttattatt 39354274  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaa 553  Q
    ||||  |||| ||||| |||||||  ||| |||||||||||||    
T  39354273 ttaatttttttaaaaatatttcataatgtgcgtaatttaaaaa 39354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 460 - 609
Target Start/End: Original strand, 887210 - 887353
Alignment:
Q  460 ataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    ||||||||||||||||||||||||||||||||||||||| |||    ||| ||||  |||| |||||||||| || |  ||||||||||||||| |||||    
T  887210 ataaatcatgtgtgattgaagtattatatgatcgtttatcatg----ttttttaa--tttttaaaaacattttatagcatccgtaatttaaaaaagaaaa 887303  T
Q  560 ataaaccctcctctcacttcccctcttaaaccctaatctaaacacaccct 609  Q
     ||| | |||| ||| ||||||||| |||||| | ||| | |||||||||    
T  887304 gtaagcgctcccctcccttcccctcctaaaccttcatccagacacaccct 887353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 437 - 580
Target Start/End: Original strand, 12751885 - 12752029
Alignment:
Q  437 actatataacatgtttt-tctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatc 535  Q
    |||||||||||| |||| |||||||||| | | |||||||||||||||||||||||||||||||||   | | | ||||  ||| |||||| |||||||     
T  12751885 actatataacatattttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcata 12751984  T
Q  536 gtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcc 580  Q
    |||||| |||||| |||| |||||  ||||||||| ||| |||||    
T  12751985 gtgtccataattttaaaacgaaaagcaaaccctcccctctcttcc 12752029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 371 - 498
Target Start/End: Original strand, 41778773 - 41778905
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggg-----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||| ||||     |||  |||||||||||||| |  |||||||||  |||  ||||| |||||||| ||||||||||    
T  41778773 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaat 41778872  T
Q  466 catgtgtgattgaagtattatatgatcgtttat 498  Q
     | |||||||||||||||||||||||| |||||    
T  41778873 taagtgtgattgaagtattatatgatcatttat 41778905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 412 - 498
Target Start/End: Complemental strand, 6721820 - 6721734
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| ||||||||||||||  || || |||||| |||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttat 6721734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 469 - 559
Target Start/End: Original strand, 34209567 - 34209657
Alignment:
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    ||||||||||||| ||||||||| |||||| |||  ||| ||||||| |||||||||| ||||||| ||||  ||||||||||||||||||    
T  34209567 gtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaa 34209657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 367 - 491
Target Start/End: Original strand, 41841678 - 41841807
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggaggg-----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaat 461  Q
    ||||| ||||||||||||| |||| ||||||||||     ||   ||||||||  ||||||||||||||||||  |||||||||||| |||| |||||||    
T  41841678 ttttaaggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaat 41841777  T
Q  462 aaatcatgtgtgattgaagtattatatgat 491  Q
    |||| | | ||||||| |||||||||||||    
T  41841778 aaattaagggtgattggagtattatatgat 41841807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 536 - 611
Target Start/End: Original strand, 17380011 - 17380087
Alignment:
Q  536 gtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||||| |||||||| |||| |||||||||||||    
T  17380011 gtgtccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacaccctta 17380087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 511 - 570
Target Start/End: Original strand, 1583222 - 1583281
Alignment:
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  1583222 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcc 1583281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 417 - 570
Target Start/End: Original strand, 7681299 - 7681448
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat-tatgaaaatttgttaac 515  Q
    ||||| ||||| |||||| || ||||||| |  ||||| |||||||||| | |||||||||||||||||||||||||||| | ||| |     |||||||    
T  7681299 ttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgtatatca-----tgttaac 7681393  T
Q  516 cttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
     ||| |||||| |||||||  | |||| ||||||||||| |||| ||||||||||    
T  7681394 ttttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaaccctcc 7681448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 3094548 - 3094472
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgat 491  Q
    |||||| |||||||||||||| ||||| ||| |||||||||||||||||||   ||||  |||||||||||||||||    
T  3094548 acttttattttttaaattacaaactatgtaaaatgtttttctaaaataaatttcgtgtttttgaagtattatatgat 3094472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 481 - 565
Target Start/End: Original strand, 27926668 - 27926752
Alignment:
Q  481 tattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    |||||||||||||||||| |||  ||| ||||||| ||||||  || |||| || || |||||||||||||||||||||||||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaac 27926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 29525931 - 29525855
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatat 488  Q
    |||| ||||||||||||||| || || ||||||| |||||||| |||||||||| |  |||||||||||||||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatat 29525855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 9592032 - 9591983
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  9592032 ttactttttttttttaaattacgcactatataacatgtttttctaaaata 9591983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 18811376 - 18811460
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||||||||||||||    |||||  ||||||| |||||||||| | ||||||||||| ||||||||||| ||||||    
T  18811376 ttacttttcttttttaaattacagtaactataaagtgttttt-taaaataaattaagtgtgattgaaatattatatgattgtttat 18811460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 22356175 - 22356248
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||||||||| ||||||| |||||||| ||| ||||||||| |||| ||| |||| |||||||||||    
T  22356175 tgtccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 612
Target Start/End: Original strand, 35736338 - 35736434
Alignment:
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    ||||||||||| |||||| ||||||| |||||||||| ||||| | | |||||| ||| |||| |||| ||||||||  ||| ||||||||||||||    
T  35736338 ttttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacacccttag 35736434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 39821902 - 39821845
Alignment:
Q  372 gggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    |||||||||||||| |||||||||||||||     ||||||||| ||||||||||||||||||    
T  39821902 gggtgtgtttggatggagggtttaggaggg-----gagggtttagttttcttttttaaattac 39821845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 612
Target Start/End: Original strand, 15224868 - 15224941
Alignment:
Q  540 ccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacacccttag 612  Q
    |||||||||||||| ||||| |||||| ||| ||| ||||||||| ||||||| | ||| ||||||||||||||    
T  15224868 ccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaacccttgatccaaacacacccttag 15224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 9631804 - 9631736
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||| |||||||||||||     |||||| ||||||| ||||||| ||||||||||||    
T  9631804 agggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattac 9631736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 36347713 - 36347785
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||||||||||||| ||||| ||||| ||||  || ||||||||| |||||||| |||| |||||||||||    
T  36347713 gtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 520 - 611
Target Start/End: Original strand, 42813774 - 42813866
Alignment:
Q  520 taaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacaccctta 611  Q
    |||||| ||||| ||  ||| ||||||||||||| ||||||||| || ||| ||| ||||||||| ||||||| | ||| |||||||||||||    
T  42813774 taaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccctta 42813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Original strand, 17379844 - 17379878
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  17379844 ttagggtgtgtttggattgagggtttaggagggga 17379878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 543 - 593
Target Start/End: Complemental strand, 39821736 - 39821686
Alignment:
Q  543 taatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||||||||||||||||| |||||||||| |||  || ||||||||||||||    
T  39821736 taatttaaaaatgaaaagtaaaccctcccctccatttccctcttaaaccct 39821686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 415 - 488
Target Start/End: Complemental strand, 2381182 - 2381109
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatat 488  Q
    |||||| |||||||||||||  || || ||| |||||||| |||||||||| | ||||  ||||||||||||||    
T  2381182 acttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatat 2381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 517 - 570
Target Start/End: Original strand, 14196820 - 14196873
Alignment:
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||||| || |||| ||||||||||||| ||||| ||| ||||||    
T  14196820 ttttaaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcc 14196873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 491
Target Start/End: Original strand, 32503216 - 32503284
Alignment:
Q  422 ttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgat 491  Q
    |||||||||| || || |||||||||| |||||||||||||||| | || ||||| || |||||||||||    
T  32503216 ttttttaaat-actgattatataacatatttttctaaaataaattaagtatgattaaaatattatatgat 32503284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 45098216 - 45098301
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||||||| ||||||| |||||| |  || ||| |||| ||| |||||||||| | ||||  |||||||||||||||||| |||||    
T  45098216 ttacttttattttttacattacaaataatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttat 45098301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 3e-63; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 371 - 609
Target Start/End: Original strand, 54935067 - 54935313
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga------gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaa 464  Q
    ||||||||||||||| |||||||||||||||||      |  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaa 54935166  T
Q  465 tcatgtgtgattgaagtatt-atatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    | | |||||||||||||||| |||||||||||||| ||   ||| || |||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  54935167 ttaagtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataa 54935266  T
Q  564 accctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||| ||| ||||||||| ||||||||  ||| |||||||||||    
T  54935267 accctcccctcccttcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 367 - 612
Target Start/End: Original strand, 45741886 - 45742137
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggagggga--gac---gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaat 461  Q
    ||||||||||||||||||| |||||||||||||||||  ||    |||| ||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  45741886 ttttagggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaat 45741985  T
Q  462 aaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaat 561  Q
    |||| |  ||||||||||||||||||||||||||||| |||  ||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| |    
T  45741986 aaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 45742085  T
Q  562 aaaccctcctctcacttcccctcttaaaccc-taatctaaacacacccttag 612  Q
    |||| |||| ||| ||| ||| | ||||||| | ||| ||||||||||||||    
T  45742086 aaactctcccctccctttcccgcctaaacccttcatccaaacacacccttag 45742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 371 - 590
Target Start/End: Complemental strand, 31348565 - 31348341
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| ||| |||||||||||||     |  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaat 31348466  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     ||||||||||||| ||||||||||| |||||| |||  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  31348465 tatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 31348366  T
Q  566 cctcctctcacttcccctcttaaac 590  Q
    ||| | ||| ||||||||| |||||    
T  31348365 ccttccctcccttcccctcataaac 31348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 371 - 609
Target Start/End: Original strand, 54320435 - 54320678
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---gacg-agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatc 466  Q
    ||||||||||||||| ||||||||||||||| |   || | |||||||  |||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  54320435 agggtgtgtttggattgagggtttaggagggaaagggagggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaatt 54320534  T
Q  467 atgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
    | ||||||||| ||||||||||||| |||||| |||  ||| || |||| ||||||||||| |||||| ||||||||||||||||||| ||||  |||||    
T  54320535 aagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaacc 54320634  T
Q  567 ctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||| ||| ||||||||| |||||||| |||| |||||||||||    
T  54320635 ctcccctcccttcccctcctaaaccctcaatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 410 - 612
Target Start/End: Complemental strand, 49735668 - 49735465
Alignment:
Q  410 ggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaattt 509  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||| |||  |||      
T  49735668 ggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatattatattatcgtttatcatgttaatag 49735569  T
Q  510 gttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccc 608  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||||||| | |||||||| ||| ||||||||| |||||||| |||| ||||||||||    
T  49735568 gttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735469  T
Q  609 ttag 612  Q
    ||||    
T  49735468 ttag 49735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 375 - 593
Target Start/End: Original strand, 27735749 - 27735972
Alignment:
Q  375 tgtgtttggatcgagggtttaggagggga---gacgag--ggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatg 469  Q
    |||||||||||||||||||||||||||||   || |||  |||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||| | |    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaag 27735848  T
Q  470 tgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctc 569  Q
    ||||||||||||||||||||||| ||||| |||  ||| || ||||  |||||||||||||| || |||||||||||||||||||||||||| ||||||     
T  27735849 tgtgattgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaacccta 27735948  T
Q  570 ctctcacttcccctcttaaaccct 593  Q
      ||| ||||||||| ||||||||    
T  27735949 tcctcccttcccctcctaaaccct 27735972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 368 - 611
Target Start/End: Original strand, 41174353 - 41174591
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    |||||||||||||||||| |||||||||||||||||      || ||| ||| |||||||||||||  ||||||||| ||||||||||||||||||||||    
T  41174353 tttagggtgtgtttggattgagggtttaggaggggat-----ggcttaattt-cttttttaaattagggactatatagcatgtttttctaaaataaatca 41174446  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
      ||||||||| ||||||||||||| |||||||||  ||| || |||| ||||||||| |||||||| |||||| ||| ||||||||||||| ||||||     
T  41174447 aatgtgattgatgtattatatgatcatttattatgttaatatgctaactttttaaaaaccatttcatagtgtccctaaattaaaaatgaaaactaaacca 41174546  T
Q  568 tcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||| ||| ||||||||| ||||||||  ||| |||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccctta 41174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 371 - 570
Target Start/End: Original strand, 29798288 - 29798489
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| || ||||||||||||||     || ||  |||||||||| |||||||||||||||||||||||||||||||||||    |||||    
T  29798288 agggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttct----taaat 29798383  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatg-aaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    || ||||||||||||||||||||||||||||||||||   ||  ||||||  |||||||||||||||||| |||||||||||||||||||||||| | ||    
T  29798384 caagtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactgaa 29798483  T
Q  565 ccctcc 570  Q
    ||||||    
T  29798484 ccctcc 29798489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 368 - 547
Target Start/End: Original strand, 26166934 - 26167118
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| |||||||||||||||||   |||||     |||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  26166934 tttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaata 26167033  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatt 547  Q
    ||| | |||||||||||||||||||||||||||||| |||  ||| |||||||  || |||||||||||||  ||||||||||||    
T  26167034 aattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 369 - 570
Target Start/End: Complemental strand, 46007947 - 46007739
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    |||| |||||||||||| |||||||||||||||||     |  |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  46007947 ttagagtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataa 46007848  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttt-aaaaaaca-tttcatcgtgtccgtaatttaaaaatgaaaaat 561  Q
    || | ||| |||||||||||||||||||| ||||| |||  ||| ||||||| |||| |||||||| ||||||  |||| |||||||||||||||||| |    
T  46007847 attaagtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagt 46007748  T
Q  562 aaaccctcc 570  Q
    |||||||||    
T  46007747 aaaccctcc 46007739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 369 - 568
Target Start/End: Complemental strand, 47433955 - 47433751
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactata-taacatgtttttctaaaata 462  Q
    ||||||||||||||| | || ||||||||||||||     || |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  47433955 ttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaata 47433856  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||| | ||||||||||||||||||||||||||||| ||||  | | | ||||  |||||||||||||| |||  ||||| ||||||||||| ||||| ||    
T  47433855 aattaagtgtgattgaagtattatatgatcgttta-tatgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaatta 47433757  T
Q  563 aaccct 568  Q
    ||||||    
T  47433756 aaccct 47433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 371 - 609
Target Start/End: Complemental strand, 1968603 - 1968351
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||   |||||     |||| ||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataaat 1968504  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctt-------ttaaaaa-acatttcatcgtgtccgtaatttaaaaatgaa 557  Q
    || |||||||||||||||||||||||||||||| |||  ||| ||||||| ||       ||||||| | ||||||| |||||| |||||||| | ||||    
T  1968503 caggtgtgattgaagtattatatgatcgtttatcatgttaatatgttaacttttaaaaagttaaaaagatatttcatagtgtccataatttaatattgaa 1968404  T
Q  558 aaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacaccct 609  Q
    || |||||||||| ||| ||| |||||| |||||| ||||| |||| ||||||    
T  1968403 aagtaaaccctcccctccctttccctctcaaacccttaatccaaacgcaccct 1968351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 373 - 570
Target Start/End: Complemental strand, 2248043 - 2247843
Alignment:
Q  373 ggtgtgtttggatcgagggtttaggagggga---gacg--agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    ||||||||||||| |||||||||||||| ||   || |  || ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaaaaaat-a 2247946  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
    ||||||||||||||||||||| || |||||| ||   |||  |||||  |||||| |||||||| ||  ||||||||||||||||||||||||| |||||    
T  2247945 tgtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaaatgaaccc 2247846  T
Q  568 tcc 570  Q
    |||    
T  2247845 tcc 2247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 411 - 590
Target Start/End: Original strand, 6891405 - 6891584
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    ||||| |||||||||||||| |||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||  | | |     
T  6891405 gtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttataatgttattatt 6891504  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaac 590  Q
    ||||  |||| ||||||| ||||| |||||| ||||||||||| |||||  |||| |||| ||| ||||||||| |||||    
T  6891505 ttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctctcttcccctcctaaac 6891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 422 - 564
Target Start/End: Original strand, 36151632 - 36151773
Alignment:
Q  422 ttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttta 521  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||  ||| |||||| ||||||    
T  36151632 ttttataaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaa-ctttta 36151730  T
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    |||| |||||  | |||| | ||||||||||||||||| ||||    
T  36151731 aaaatcattttctagtgttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 422 - 609
Target Start/End: Complemental strand, 5731018 - 5730830
Alignment:
Q  422 ttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttta 521  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| ||||| |||  ||| |||||||  || |    
T  5731018 ttttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttca 5730919  T
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||| |||| || | |||||||||||||||||||||  ||||||||||  || ||| ||||| ||||||||  ||| |||||||||||    
T  5730918 aaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccct 5730830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 400 - 593
Target Start/End: Complemental strand, 17938318 - 17938124
Alignment:
Q  400 gggagacgagggtttacttttcttttttaaattacagactatataacat-gtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||||||  ||||| | |||||||| | ||||||||||||||||||||||||||||||    
T  17938318 gggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagtgtgattgaagtattatatgatcgtttat 17938219  T
Q  499 tatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
     |||  | | | ||||  |||||||||||||| |||  ||||| ||||||||||| ||||| ||||| || | |||  |||||||| ||||||||    
T  17938218 catgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccct 17938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 418 - 593
Target Start/End: Original strand, 35248738 - 35248913
Alignment:
Q  418 tttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacct 517  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||| |||  |||  |||||| |    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  518 tttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    || |||||| |||     |||||| |||||||||| |||||| |||||||||| ||| || || ||| ||||||||    
T  35248838 ttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccct 35248913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 368 - 553
Target Start/End: Original strand, 16400797 - 16400987
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagg-----ggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    ||||| ||||| |||||| ||||||||||||||     ||||  |||| || |||||| ||||||| | |||| |||||| |||||||||||||||||||    
T  16400797 tttagtgtgtgattggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaata 16400896  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaa 553  Q
    ||| |  | ||||||||||||||||||||||||||| |||  ||| ||||||| |||||||||  ||||||| |||||| |||||||||||    
T  16400897 aattaattatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 412 - 565
Target Start/End: Original strand, 44784038 - 44784190
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||| | |  ||| |||    
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  512 taaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    ||| | |||| |||| ||||| | |||| ||||||||||||| ||||| |||||    
T  44784138 taa-cgtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaac 44784190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 368 - 498
Target Start/End: Original strand, 22920978 - 22921114
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggg-----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| || ||||||||||||     |||| |||  ||||| |||||||||||||||||| |||| |||||||||||||||| ||||    
T  22920978 tttagggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaata 22921077  T
Q  463 aatc-atgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| | ||||||||||||||||||||||||||||||    
T  22921078 aatcaaagtgtgattgaagtattatatgatcgtttat 22921114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 368 - 498
Target Start/End: Complemental strand, 22970821 - 22970685
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggg-----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| || ||||||||||||     |||| |||  ||||| |||||||||||||||||| |||| |||||||||||||||| ||||    
T  22970821 tttagggtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaata 22970722  T
Q  463 aatc-atgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| | ||||||||||||||||||||||||||||||    
T  22970721 aatcaaagtgtgattgaagtattatatgatcgtttat 22970685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 364 - 498
Target Start/End: Original strand, 37711131 - 37711275
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggagggga----------gacgagggtttacttttcttttttaaattacagactatataacatgtttt 453  Q
    |||||| ||||||||||||||| |||||||||||||||||          |  ||||||||  |||||||||||||||||| |||||||||||||||||     
T  37711131 atctttaagggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttc 37711230  T
Q  454 tctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||||||||||| | |||||||||||||||||||||||| |||||    
T  37711231 tctaaaataaattaagtgtgattgaagtattatatgatcatttat 37711275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 369 - 593
Target Start/End: Complemental strand, 45132741 - 45132514
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga---gacgag--ggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    |||||||||||||| || ||| |||||||||||||   || |||  ||||||||||||||||||||||||| |||||||||| ||||      |||||||    
T  45132741 ttagggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt------aaaataa 45132648  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaa-----atgaaa 558  Q
    || | |||||||||||||||||||||||||||||| ||   ||| |||||| ||||| ||||||||||| | |||| | ||||||||||     ||||||    
T  45132647 attaagtgtgattgaagtattatatgatcgtttatcattttaatatgttaa-ctttttaaaaacatttcgtagtgtacataatttaaaaagattatgaaa 45132549  T
Q  559 aataaaccctcctctcacttcccctcttaaaccct 593  Q
    | |||||| ||| ||| ||||| ||| ||||||||    
T  45132548 agtaaaccatcccctctcttccgctcctaaaccct 45132514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 412 - 497
Target Start/End: Original strand, 28332850 - 28332935
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgttta 497  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||    
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgttta 28332935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 384 - 570
Target Start/End: Complemental strand, 24565575 - 24565386
Alignment:
Q  384 atcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattga 478  Q
    ||||||||||||||||||||   |||||     ||||| ||||||||||||||||| | |||||||||||||||||||| ||||| | | | ||||||||    
T  24565575 atcgagggtttaggaggggaagggagggaagaatttacatttcttttttaaattacgggctatataacatgtttttctataataa-tga-gcgtgattga 24565478  T
Q  479 agtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||| | |||||| | |  |||  |||||| ||||||||| |||||| |  | ||||||||||||||||||||| ||||||||||    
T  24565477 agtattatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctcc 24565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 423 - 498
Target Start/End: Complemental strand, 2917150 - 2917075
Alignment:
Q  423 tttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||||||||| | |||||||||||||| |||||||||||||||    |||||||||||||||||||||||||||||    
T  2917150 tttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttat 2917075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 371 - 498
Target Start/End: Original strand, 56135749 - 56135881
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||     |  ||||||| | |||| |||||||||||||  || || ||| |||||||| ||||||||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 56135848  T
Q  466 catgtgtgattgaagtattatatgatcgtttat 498  Q
     | ||||  |||||||||||||||||| |||||    
T  56135849 taagtgtttttgaagtattatatgatcatttat 56135881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 454
Target Start/End: Complemental strand, 31720072 - 31719991
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagggt-ttacttttcttttttaaattacagactatataacatgttttt 454  Q
    |||||||||||| |||| |||||||||||||| | |  | ||| ||||||||||||||||||| ||||||||||||||||||    
T  31720072 gtgtgtttggattgaggctttaggaggggagaagggattgttaattttcttttttaaattacaaactatataacatgttttt 31719991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 34110920 - 34111008
Alignment:
Q  481 tattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||||||||||||||||| |||  ||| ||||||| |||||||||||||||||  || | |||||||||||||| |||| ||||||||||    
T  34110920 tattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaaaagtaaaccctcc 34111008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 368 - 492
Target Start/End: Complemental strand, 4437661 - 4437543
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    |||||||||||||||||| || |||||||||||||||     |||| | |||| |||||||||||| | || || ||| ||||||||  |||||||||||    
T  4437661 tttagggtgtgtttggattgaaggtttaggaggggag-----ggttcatttttattttttaaattaaaaacaatgtaaaatgttttta-aaaataaatca 4437568  T
Q  468 tgtgtgattgaagtattatatgatc 492  Q
     ||||  ||||||||||||||||||    
T  4437567 agtgtttttgaagtattatatgatc 4437543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 364 - 498
Target Start/End: Complemental strand, 17182736 - 17182597
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggaggggaga-----cgagggtttacttttcttttttaaattacagactatataacatgtttttctaa 458  Q
    |||||||||||||||||||||| ||||||||| ||||||| |      ||||  |||||||| |||||||||||||  || |  ||| || ||||| |||    
T  17182736 atcttttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaa 17182637  T
Q  459 aataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||| | ||||  |||||||||||||||||| |||||    
T  17182636 aataaattaagtgtttttgaagtattatatgatcatttat 17182597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 55510217 - 55510296
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc 492  Q
    ||||||||| ||||||| ||| |||| || ||| |||||||| |||||||||| | |||||| |||||||||||||||||    
T  55510217 ttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatc 55510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 1968531 - 1968605
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||||||||| ||||| || | ||| ||||||||| |||||||| |||| |||||||||||||    
T  1968531 gtccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacacaccctta 1968605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 27775581 - 27775698
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtt-tttctaaaataaat-- 465  Q
    ||||||| ||||||||| |||||||||||||||||    |||| ||||||||||||| |||||||| ||  |||||| ||||| ||| ||||||||||      
T  27775581 ttagggtttgtttggattgagggtttaggaggggaagaaagggcttacttttcttttctaaattacggataatataaaatgttgtttttaaaataaatta 27775680  T
Q  466 catgtgtgattgaagtat 483  Q
     | |||||||||||||||    
T  27775681 aaagtgtgattgaagtat 27775698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 37711285 - 37711367
Alignment:
Q  528 atttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||| || |||||||||||||||||||||||  |||||||||| ||| ||||||||| ||||||||  ||| |||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 56135968 - 56135908
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaatta 433  Q
    |||||||||||||||||| ||||||||||||||||||     || |||||||||||||||||||||    
T  56135968 tttagggtgtgtttggatggagggtttaggaggggag-----ggcttacttttcttttttaaatta 56135908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 454
Target Start/End: Complemental strand, 11089765 - 11089672
Alignment:
Q  359 aatttatcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgttttt 454  Q
    ||||| ||||| ||||||||||||||| |||| ||||| ||||||   || ||||||| ||||||||||||||||| |||| ||||| || |||||    
T  11089765 aatttttctttaagggtgtgtttggattgaggatttagaaggggaa--gatggtttacatttcttttttaaattacggactttataaaatattttt 11089672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 611
Target Start/End: Complemental strand, 29993861 - 29993769
Alignment:
Q  520 taaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacaccctta 611  Q
    |||||| ||||| || |||||||||||||||||| ||||||  |  ||||| ||||||||||||| ||||||| ||||| |||||||| ||||    
T  29993861 taaaaatcattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccactcacttcccctcctaaacccttaatccaaacacactctta 29993769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 612
Target Start/End: Complemental strand, 56135838 - 56135746
Alignment:
Q  521 aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    ||||||||||| |   ||| |||||||||||||  |||||| |||||||| ||| ||||||||| |||||||| |||| ||||||||||||||    
T  56135838 aaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 56135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 517 - 611
Target Start/End: Original strand, 6938398 - 6938493
Alignment:
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||||||| ||  | ||||||||||||||||||||| | |||||||| |||  |||||||| |||||| |  ||| |||||||||||||    
T  6938398 ttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccctta 6938493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 593
Target Start/End: Complemental strand, 21695132 - 21694907
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| | ||||||| |||||||     |  |||||||||||||||| ||||||||||  ||| ||||||  | ||||| | || |||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaa-taaat 21695034  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||||||||||||||||||||| || || ||     | | | ||  | ||||||| ||||| || |||||||||||||||||| ||||| ||| |    
T  21695033 taagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagc 21694935  T
Q  566 cctcctctcacttcccctcttaaaccct 593  Q
    |||||  || ||||||||| ||||||||    
T  21694934 cctcccgtcccttcccctcctaaaccct 21694907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 37711372 - 37711335
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37711372 cttttagggtgtgtttggatggagggtttaggagggga 37711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 47433885 - 47433934
Alignment:
Q  542 gtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaacc 591  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  47433885 gtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaacc 47433934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 541 - 611
Target Start/End: Complemental strand, 54935137 - 54935065
Alignment:
Q  541 cgtaatttaaaaatgaaaaataaaccct-cctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||||| ||||| |||||||| || ||| ||||||||| |||||||| |||| |||||||||||||    
T  54935137 cgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccctta 54935065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 498
Target Start/End: Original strand, 11842316 - 11842439
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    |||||| | ||||||||| |||||||||| |||||||     |  |||||||||||||| |||||||||||  ||||| || |||||   |||| ||| |    
T  11842316 tttaggatatgtttggatagagggtttagaaggggag-----gacttacttttctttttcaaattacagacactataaaatatttttt--aaatgaatta 11842408  T
Q  468 tgtgtgattgaagtattatatgatcgtttat 498  Q
     || ||||||||||||||||||||| |||||    
T  11842409 agtctgattgaagtattatatgatcatttat 11842439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 593
Target Start/End: Complemental strand, 27735817 - 27735762
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    |||||||||||||||||||||| |||||||||   || ||||||||| ||||||||    
T  27735817 gtccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaaccct 27735762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 498
Target Start/End: Original strand, 43961459 - 43961542
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||||| ||||||||||||   || || ||| |||||||| |||||||||| | ||||  |||||||||||||||||| |||||    
T  43961459 acttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttat 43961542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 49735738 - 49735704
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggagggga 49735704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 377 - 459
Target Start/End: Original strand, 49936170 - 49936252
Alignment:
Q  377 tgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaa 459  Q
    |||||||||  |||||||||||||||||  ||| | || ||||||||||||||||||| |||  ||||  |||||||| ||||    
T  49936170 tgtttggatgaagggtttaggaggggaggggagtgcttgcttttcttttttaaattacggacactatatgatgtttttttaaa 49936252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 54320680 - 54320646
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  54320680 ttagggtgtgtttggattgagggtttaggagggga 54320646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 54935315 - 54935281
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  54935315 ttagggtgtgtttggatggagggtttaggagggga 54935281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 401
Target Start/End: Original strand, 5730827 - 5730860
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggg 401  Q
    |||||||||||||||||| |||||||||||||||    
T  5730827 tttagggtgtgtttggatggagggtttaggaggg 5730860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 434
Target Start/End: Original strand, 46007715 - 46007767
Alignment:
Q  377 tgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||| |||||||||||||||     ||||||||||||||| ||||||||||||    
T  46007715 tgtttggatggagggtttaggaggg-----gagggtttacttttcatttttaaattac 46007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 521 - 613
Target Start/End: Complemental strand, 51329885 - 51329792
Alignment:
Q  521 aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttagt 613  Q
    |||||||||||  |  ||| |||||||||||||| |||| | ||| |||||||  ||||||||| ||||| || |||| |||||||||||||||    
T  51329885 aaaaaacattttgtgttgttcgtaatttaaaaattaaaattgaactctcctctttcttcccctcctaaactctcaatccaaacacacccttagt 51329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 54576484 - 54576573
Alignment:
Q  521 aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacaccct 609  Q
    ||||||||||| |   ||| |||||||||||||| |||| | ||| || ||||| ||||| ||||||||||| ||||| |||||||||||    
T  54576484 aaaaaacattttacgttgttcgtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatccaaacacaccct 54576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 3e-63; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 408 - 609
Target Start/End: Complemental strand, 40095136 - 40094933
Alignment:
Q  408 agggtttacttttcttttttaaattacagactatataacatgttttt-ctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||  ||    
T  40095136 agggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaa 40095037  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacaca 605  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||  ||||||||| ||||||||  ||| |||||||    
T  40095036 tttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacaca 40094937  T
Q  606 ccct 609  Q
    ||||    
T  40094936 ccct 40094933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 369 - 613
Target Start/End: Original strand, 30010330 - 30010580
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    ||||||||||||||||| |||||||||||||||||   |||||     |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  30010330 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataa 30010429  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    || | ||||| |||||||||||||||||||||||| |||  ||| |||||||  ||||||||||||||| | ||||||||||||| |||||||||| |||    
T  30010430 attaagtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaa 30010529  T
Q  564 accctcctctcacttcccctcttaaaccct-aatctaaacacacccttagt 613  Q
    ||||||| ||| ||||||||  ||||||||  ||| |||||||||||||||    
T  30010530 accctcccctcccttccccttctaaaccctccatccaaacacacccttagt 30010580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 371 - 593
Target Start/End: Original strand, 12234010 - 12234237
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggt-----ttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||   ||||||     ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaat 12234109  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    || |||||||||| |||| |||||||| | |||||||  ||| || |||| || ||||||||||||| | |||||||||||||||||||||||| |||||    
T  12234110 caagtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaac 12234209  T
Q  566 cctcctctcacttcccctcttaaaccct 593  Q
    ||||| ||| ||||||||| ||||||||    
T  12234210 cctcccctcccttcccctcctaaaccct 12234237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 364 - 590
Target Start/End: Original strand, 8529802 - 8530023
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    |||| |||||||| |||||||| ||||||||||||||||||     |||||||||||||||||||||||||| |||||||||||||||||| | ||||||    
T  8529802 atctattagggtgcgtttggattgagggtttaggaggggag-----ggtttacttttcttttttaaattacaaactatataacatgttttttttaaataa 8529896  T
Q  464 atcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    || | |||||||||||||||||||||||||||||  |||  ||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||    
T  8529897 attaagtgtgattgaagtattatatgatcgtttaccatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaa 8529996  T
Q  564 accctcctctcacttcccctcttaaac 590  Q
    ||  ||  ||| ||||||||| |||||    
T  8529997 actttcacctcccttcccctcctaaac 8530023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 374 - 609
Target Start/End: Complemental strand, 38510135 - 38509894
Alignment:
Q  374 gtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||  ||||||||||||||||     |  ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||     
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaa 38510036  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccct 568  Q
    |||||||||||||||||||| |||||||||  ||  ||  ||||||  |||||||| ||||||||| |||||||||||||||||||||||| | ||||||    
T  38510035 gtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccct 38509936  T
Q  569 cctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||| ||||||||| ||||||||  ||| |||||||||||    
T  38509935 cctctcccttcccctcctaaaccctctatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 367 - 559
Target Start/End: Complemental strand, 32951566 - 32951369
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggag-----gggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaat 461  Q
    ||||||||||||||||||| ||| |||||||||     |||||  ||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  32951566 ttttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaat 32951467  T
Q  462 aaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    |||| | ||||||||||||||||||| |||||||||| |||  ||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  32951466 aaattaagtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaa 32951369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 407 - 609
Target Start/End: Complemental strand, 2859135 - 2858932
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||| ||     
T  2859135 gagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgtgattgaagtattatatgattgtttataatgtaag 2859036  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacaca 605  Q
    | ||||||| ||||||| |||||||||| | ||| |||||||| ||||||||| |||||||||| ||| ||| ||||| ||||||||  ||| |||||||    
T  2859035 tatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacaca 2858936  T
Q  606 ccct 609  Q
    ||||    
T  2858935 ccct 2858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 368 - 558
Target Start/End: Complemental strand, 50744518 - 50744332
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatca 467  Q
    |||||| |||| |||||| ||||||||||||||||||     |||||  |||||||||||||||||| |||||||||||| |||| |||||||||||| |    
T  50744518 tttaggatgtgcttggattgagggtttaggaggggag-----ggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaatta 50744424  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaac-cttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaa 558  Q
     |||||||||||||||||||||||||||||| |||  ||| ||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  50744423 agtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 368 - 611
Target Start/End: Complemental strand, 35349709 - 35349464
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    ||||||||||||||||||  |||||||| |||||||     |  ||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  35349709 tttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaata 35349610  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||  | | || |||||||||||||||||| |||||| |||  ||| ||||||| ||||| |||||||||||  |||||||||||||||||||||||| ||    
T  35349609 aactaagggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttca--gtgtccgtaatttaaaaatgaaaagta 35349512  T
Q  563 aaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||  | | | ||||||||||||||||  ||| |||||||||||||    
T  35349511 aaccctc--cccccctcccctcttaaaccctccatccaaacacaccctta 35349464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 371 - 590
Target Start/End: Original strand, 41498404 - 41498629
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||     |  ||||||||||||||| |||||||||||   ||||| ||||||| |||||||  |||| |    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagt 41498503  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||||||||||||||||||||||||||| |||  ||| ||||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||     
T  41498504 taagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaat 41498603  T
Q  566 cctcctctcactt-cccctcttaaac 590  Q
    ||||| ||| ||| |||||| |||||    
T  41498604 cctcccctcccttacccctcctaaac 41498629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 375 - 592
Target Start/End: Original strand, 51597672 - 51597894
Alignment:
Q  375 tgtgtttggatcgagggttta-----ggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatg 469  Q
    ||||||||||| |||||||||     ||| |||||  ||| ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| | |    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaag 51597771  T
Q  470 tgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctc 569  Q
    |||||||||||||||||||||| |||||| ||   ||| ||||||| ||||||||| |||||||| |||| | |||||||||| |||||| |||| | ||    
T  51597772 tgtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaatcatc 51597871  T
Q  570 ctctcacttcccctcttaaaccc 592  Q
    ||||  ||||| ||| |||||||    
T  51597872 ctcttccttcctctcctaaaccc 51597894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 407 - 569
Target Start/End: Complemental strand, 49946791 - 49946629
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||||||||||| ||||||  | |||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||  ||||| |||  ||    
T  49946791 gagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaa 49946692  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctc 569  Q
    | ||||||| ||| |||||| |||| || ||||||||||||||||||||| ||||||||||||    
T  49946691 tatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 445 - 581
Target Start/End: Original strand, 7444574 - 7444710
Alignment:
Q  445 acatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgta 544  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||| ||||| || |||||||||    
T  7444574 acatgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgta 7444673  T
Q  545 atttaaaaatgaaaaataaaccctcctctcacttccc 581  Q
    |||| |||||||||| |||||||||| ||| ||||||    
T  7444674 attttaaaatgaaaactaaaccctcccctctcttccc 7444710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 369 - 570
Target Start/End: Complemental strand, 26941079 - 26940883
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||||||| |||||||||||||||||      |||| | |||||||||||||| ||| || | |||||||||||||||||||||||||||     
T  26941079 ttagggtgtgtttggattgagggtttaggaggggaa-----ggttcaattttcttttttaaaatacggattctataacatgtttttctaaaataaatcaa 26940985  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccct 568  Q
    ||||||||||||||||||||||  |||||  |||  |||  |||||| ||| || ||| ||||||| |||||  |||||||||||| |||| | ||||||    
T  26940984 gtgtgattgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccct 26940885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 10391880 - 10392072
Alignment:
Q  379 tttggatcgagggtttaggaggggagac-----gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtg 473  Q
    ||||||| |||| |||||||||||| ||     ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |  ||||    
T  10391880 tttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtg 10391979  T
Q  474 attgaagtattatatgatcgtttattatgaaaatttgttaacctttt-aaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    ||| ||||||||||||| ||||||| |||  ||| ||||||| |||| ||||||||||| ||  |||  |||||||||||| ||||| |||||    
T  10391980 attaaagtattatatgaccgtttatcatgttaatatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaac 10392072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 443 - 567
Target Start/End: Complemental strand, 36285741 - 36285617
Alignment:
Q  443 taacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccg 542  Q
    |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||  ||| ||||||| |||||||||| |||| || |||| ||    
T  36285741 taacatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcg 36285642  T
Q  543 taatttaaaaatgaaaaataaaccc 567  Q
    |||||||||||||| ||||||||||    
T  36285641 taatttaaaaatgataaataaaccc 36285617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 402 - 569
Target Start/End: Original strand, 6563614 - 6563779
Alignment:
Q  402 gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattat 501  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||| ||||| ||    
T  6563614 gagaggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcat 6563711  T
Q  502 gaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctc 569  Q
    |  ||| | ||||| | |||||||| | ||||| ||||||   ||||||||||||||| |||||||||    
T  6563712 gttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccctc 6563779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 376 - 570
Target Start/End: Complemental strand, 44211134 - 44210947
Alignment:
Q  376 gtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgat 475  Q
    ||||||||||||||||||||||||||||      | ||||| |||||||| |||||||||| ||||||||| |||||||||||||||||| | |||||||    
T  44211134 gtgtttggatcgagggtttaggaggggaa-----gatttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgat 44211040  T
Q  476 tgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||||||||||||| |||    | | ||||  ||||| | ||||||||||   |||| ||||||||||| ||||| ||||||||||    
T  44211039 tgaagtattatatgatcgtttatcatgttgttattttaattttttagagaacatttcat--ggtccataatttaaaaacgaaaagtaaaccctcc 44210947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 411 - 556
Target Start/End: Complemental strand, 45585884 - 45585739
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    ||||||||||| | || ||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||| ||||||||||||||| |||  ||| ||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatg 45585785  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatga 556  Q
    ||||| ||| ||||||||||| || || ||  ||||||||||||||    
T  45585784 ttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 472 - 593
Target Start/End: Complemental strand, 20576269 - 20576150
Alignment:
Q  472 tgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcct 571  Q
    ||||||||||||||||||||||||||| |||  ||| | |||||  ||||||||||||||||  |||||||||||||||||||||||  ||||| ||||     
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttca--gtgtccgtaatttaaaaatgaaatctaaactctccc 20576172  T
Q  572 ctcacttcccctcttaaaccct 593  Q
    ||| ||||||||| ||||||||    
T  20576171 ctcccttcccctcctaaaccct 20576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 450 - 580
Target Start/End: Original strand, 41676363 - 41676495
Alignment:
Q  450 tttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaa----aacatttcatcgtgtccgtaa 545  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||| |||  ||| ||||||  ||| ||||    ||||||| || ||||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaa--tttaaaaaaaaaaacattttatagtgtccgtaa 41676460  T
Q  546 tttaaaaatgaaaaataaaccctcctctcacttcc 580  Q
    |||||||||||||| |||||||||| ||| |||||    
T  41676461 tttaaaaatgaaaagtaaaccctcccctctcttcc 41676495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 412 - 540
Target Start/End: Original strand, 42230585 - 42230712
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    ||||||||| ||||| ||||||  || ||| ||||||||||||  ||||||||| | ||||||||||||||||||||||| ||||||||||  ||| | |    
T  42230585 tttactttt-tttttaaaattattgattatttaacatgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattt 42230683  T
Q  512 taaccttttaaaaaacatttcatcgtgtc 540  Q
    |||| || |||||||||||| || |||||    
T  42230684 taactttataaaaaacattttatagtgtc 42230712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 368 - 454
Target Start/End: Complemental strand, 41676523 - 41676437
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgttttt 454  Q
    |||||| |||||||||||||||||||||||| | |||  ||||||||||||||| |||||||||||| |||  ||||| ||||||||    
T  41676523 tttaggatgtgtttggatcgagggtttaggaagagaggggagggtttacttttcatttttaaattacggacactataaaatgttttt 41676437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 374 - 462
Target Start/End: Complemental strand, 2470966 - 2470883
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||| || ||||||||||||||      ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  2470966 gtgtgtttggattgatggtttaggaggggaa-----ggtttacttttcttttttaaattatcaactatataacatgtttttctaaaata 2470883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 368 - 460
Target Start/End: Complemental strand, 10392115 - 10392023
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaa 460  Q
    |||||| ||||||||||| ||||||||||||||||||  ||| ||||||||||| ||||||||||||| ||  ||| | |||||||| |||||    
T  10392115 tttaggctgtgtttggatggagggtttaggaggggaggagagagtttacttttcgtttttaaattacaaacattattaaatgtttttttaaaa 10392023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 368 - 498
Target Start/End: Complemental strand, 1085737 - 1085602
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga---gacgag--ggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| |||||||||||||||||   || |||  |  | |||||| |||||||||||||  || || ||| |||||||| |||||||    
T  1085737 tttagggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaata 1085638  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||| | ||||  |||||||||||||||||| |||||    
T  1085637 aattaagtgtttttgaagtattatatgatcatttat 1085602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 611
Target Start/End: Complemental strand, 41498471 - 41498402
Alignment:
Q  543 taatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||| ||||| |||||||||| ||||||||||||| |||||||| |||| |||||||||||||    
T  41498471 taatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccctta 41498402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 35349634 - 35349706
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacaccct 609  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||| ||||||| ||||| |||||||||||    
T  35349634 gtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccct 35349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 26324049 - 26324112
Alignment:
Q  396 ggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaa 459  Q
    |||||||||  ||||||||  ||||||||||||||||||  |||||||||||||||||||||||    
T  26324049 ggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 49832594 - 49832669
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatat 488  Q
    |||||||||||||||||||||||||  ||||||  |||||||  ||||||||  | ||||||||||||||||||||    
T  49832594 ttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtgattgaagtattatat 49832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 501
Target Start/End: Original strand, 2506547 - 2506674
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||| ||||||||||| |||||||||| |||||||     |||| | |||| | |||||||||||   | |||||| ||||||||  ||||||||| |     
T  2506547 ttaggatgtgtttggattgagggtttagaaggggag-----ggttcatttttatcttttaaattacgaccaatataaaatgttttttcaaaataaattaa 2506641  T
Q  469 gtgtgattgaagtattatatgatcgtttattat 501  Q
    ||||  |||||||||||||||||| ||||||||    
T  2506642 gtgtttttgaagtattatatgatcatttattat 2506674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 368 - 434
Target Start/End: Original strand, 38509891 - 38509962
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattac 434  Q
    |||||||||||||||||| |||||||||||||||||     || ||||||| ||||||| ||||||||||||    
T  38509891 tttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattac 38509962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 538 - 611
Target Start/End: Complemental strand, 12234082 - 12234008
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||| ||||| ||| |||| | ||| ||||||||| |||||||| |||| |||||||||||||    
T  12234082 gtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccctta 12234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 538 - 615
Target Start/End: Complemental strand, 30010404 - 30010326
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttagtgt 615  Q
    |||||||||||||| | ||||| |||| ||||| ||| ||||||||| |||||||| |||| ||||||||||| |||||    
T  30010404 gtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagtgt 30010326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 369 - 434
Target Start/End: Original strand, 40094931 - 40095001
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggg-----agacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||| ||||||||||||||||     ||  ||||||||||||||| ||||||||||||    
T  40094931 ttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattac 40095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 609
Target Start/End: Complemental strand, 40709361 - 40709292
Alignment:
Q  541 cgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||||||||||| ||||| |||  ||||||||| |||||||||||||||| | |||| |||||||||||    
T  40709361 cgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccct 40709292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 20607221 - 20607285
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaatta 433  Q
    |||||||||||||| || |||||||||||||||||   ||||| | |||||| ||||||||||||    
T  20607221 ttagggtgtgtttgaattgagggtttaggaggggaagggagggctcacttttattttttaaatta 20607285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 412 - 491
Target Start/End: Complemental strand, 43553129 - 43553049
Alignment:
Q  412 tttacttttcttttttaaatt-acagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgat 491  Q
    |||||||||| |||||||||| || || |||||||| ||||| |||||||||||| | |||| | |||| |||||||||||    
T  43553129 tttacttttcatttttaaatttacggattatataacttgtttctctaaaataaattaagtgttactgaaatattatatgat 43553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 44996717 - 44996665
Alignment:
Q  377 tgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaa 429  Q
    ||||||||| |||||||| |||||||||  ||||| |||||||||||||||||    
T  44996717 tgtttggatggagggttttggaggggaggggagggcttacttttcttttttaa 44996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 403
Target Start/End: Original strand, 2470727 - 2470762
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga 403  Q
    |||||||||||||||||| |||||||||||||||||    
T  2470727 tttagggtgtgtttggatggagggtttaggagggga 2470762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 589
Target Start/End: Complemental strand, 10391944 - 10391893
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaa 589  Q
    |||||||||||||||||||||| |||||||||| |||  |||||||| ||||    
T  10391944 gtccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaa 10391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 539 - 593
Target Start/End: Original strand, 25268437 - 25268491
Alignment:
Q  539 tccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||||||||||||||| | ||| |||||||||| ||||||||||||  ||||||||    
T  25268437 tccgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccct 25268491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 517 - 591
Target Start/End: Complemental strand, 49832640 - 49832566
Alignment:
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaacc 591  Q
    |||||||||||| || ||  | || |||||||||||| ||||| ||| | |||||||||||||||||| ||||||    
T  49832640 ttttaaaaaacactttatattatctgtaatttaaaaaagaaaagtaagctctcctctcacttcccctcctaaacc 49832566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 2859104 - 2859157
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaacc 591  Q
    ||||||||||||||||  |||| |||||||||| ||| ||||||||| ||||||    
T  2859104 gtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaacc 2859157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 20607466 - 20607429
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  20607466 ctttaagggtgtgtttggatggagggtttaggagggga 20607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 415 - 492
Target Start/End: Original strand, 33643317 - 33643394
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc 492  Q
    |||||| |||||||||||||  |  || ||| |||||||| |||||||||| | ||||  ||||||||||||||||||    
T  33643317 acttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatc 33643394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 404
Target Start/End: Original strand, 51303384 - 51303417
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggag 404  Q
    ||||||||||||||| ||||||||||||||||||    
T  51303384 agggtgtgtttggattgagggtttaggaggggag 51303417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 3e-60; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 369 - 570
Target Start/End: Complemental strand, 37102385 - 37102189
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgttttt-ctaaaataaatca 467  Q
    ||||||||||||||||| |||||||||||||||||      ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaa-----ggtttacttatcttttttaaattacggactatataacatgttttttctaaaataaatca 37102291  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
     ||||| ||||||||||||||||||||| ||||||  ||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  37102290 agtgtggttgaagtattatatgatcgtt-attatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccc 37102192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 371 - 609
Target Start/End: Original strand, 24560217 - 24560461
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    |||||||||||||||  ||||||||||||||||     |  ||||||||  |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  24560217 agggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaat 24560316  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     |  ||||||||||||||||||||||||||||| |||  ||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  24560317 taaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaac 24560416  T
Q  566 cctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
     ||||  ||  |||||||| ||||||||  ||| |||||||||||    
T  24560417 tctcccatccgttcccctcctaaaccctccatccaaacacaccct 24560461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 408 - 570
Target Start/End: Complemental strand, 30200293 - 30200128
Alignment:
Q  408 agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc---gtttattatgaa 504  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||   ||||||||||      
T  30200293 agggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatatgatcgttgtttattatgtt 30200194  T
Q  505 aatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||| ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  30200193 aatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcc 30200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 368 - 566
Target Start/End: Complemental strand, 220644 - 220441
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||| ||||||||| |||||||||||||| ||   |||||     ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  220644 tttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaata 220545  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    ||||| || |||||||||| ||||| ||| ||||||||||  ||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||| ||    
T  220544 aatcaagtatgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaacta 220445  T
Q  563 aacc 566  Q
    ||||    
T  220444 aacc 220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 371 - 570
Target Start/End: Original strand, 21773782 - 21773986
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---gacg--agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||| ||||||||| || ||||||||||||||   || |  ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  21773782 agggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaat 21773881  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||||||||| |||||||||| |||||| ||| |||| ||||||| |||||||||||||||| | |||| |||||||||||||| |||| |||||    
T  21773882 taagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaac 21773981  T
Q  566 cctcc 570  Q
    |||||    
T  21773982 cctcc 21773986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 371 - 589
Target Start/End: Complemental strand, 41110565 - 41110342
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| ||||||||  |||||||     || || |||||||||||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaat 41110466  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | ||||||||||||||||||||||| |||||| |||  ||| ||||||| ||||| |||| ||||||| |||||||||||||||||||||||| |||||    
T  41110465 taagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaac 41110366  T
Q  566 cctcctctcacttcccctcttaaa 589  Q
    | ||  ||| ||||||||| ||||    
T  41110365 cttctcctcccttcccctcctaaa 41110342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 371 - 570
Target Start/End: Complemental strand, 9312713 - 9312511
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacat---gtttttctaaaataaatca 467  Q
    |||| |||||||||| ||||||||||||||||||  ||||||||  |||||||||||||||||| |||||||||||||   | ||||||||||||||| |    
T  9312713 agggagtgtttggattgagggtttaggaggggaggggagggtttgattttcttttttaaattaccgactatataacatcatgattttctaaaataaatta 9312614  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
     ||||||||  ||||||||||||| |||||| |||  ||| ||||||| ||||| |||| ||||||| ||||| ||||||||||||||||||  ||||||    
T  9312613 agtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaatcaaaccc 9312514  T
Q  568 tcc 570  Q
    |||    
T  9312513 tcc 9312511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 371 - 614
Target Start/End: Complemental strand, 25655216 - 25654966
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagg-----ggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| ||||||| | ||||     ||||  |||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  25655216 agggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaat 25655117  T
Q  466 catgtgtgattgaagtatt--atatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
     | ||||||||||||||||  |||||||| ||||| ||   ||| |||||||  || |||||||||||| | |||| |||||| |||||||||||| |||    
T  25655116 taagtgtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaa 25655017  T
Q  564 accctcctctcacttcccctcttaaaccctaatctaaacacacccttagtg 614  Q
    ||||||| ||| ||||||||| |||| |   ||||||| ||||||| ||||    
T  25655016 accctcccctcccttcccctcctaaatctccatctaaatacaccctaagtg 25654966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 371 - 553
Target Start/End: Complemental strand, 2387994 - 2387817
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| |||||||| |||||||||     |||||||||||||||| ||||| || | |||||||||||||||||||||||||||| | ||    
T  2387994 agggtgtgtttggattgagggtttgggaggggag-----ggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagt 2387900  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaa 553  Q
    |||||| || |||||||||||||||||| |||  | | | ||||| | |||||||||||| ||| ||||||||||||||||||    
T  2387899 gtgattaaattattatatgatcgtttatcatgttattattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 371 - 580
Target Start/End: Original strand, 651740 - 651944
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| ||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||    
T  651740 agggtgtgtttggattgagggtttaggagggg----gagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagt 651835  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||||| || ||||||| |||| ||| | |||  | | | ||||  |||| ||||||||||||| || ||| |||||||||||  | || ||||||||||    
T  651836 gtgattaaaatattatacgatcctttgtcatgttattattttaa-tttttcaaaaacatttcatagtttccataatttaaaaacaataagtaaaccctcc 651934  T
Q  571 tctcacttcc 580  Q
     ||| |||||    
T  651935 cctcccttcc 651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 378 - 566
Target Start/End: Original strand, 46556160 - 46556345
Alignment:
Q  378 gtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattg 477  Q
    |||||||| |||||||||||||||||||     ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||   |||||||||    
T  46556160 gtttggattgagggtttaggaggggaga-----gtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattg 46556254  T
Q  478 aagtat--tatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
    ||||||  ||||||| ||||| | |||  ||| | ||||| |||||||||| || |||| |||||||||||| ||||||||||| ||||||    
T  46556255 aagtattatatatgaccgtttgtcatgttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaacc 46556345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 417 - 592
Target Start/End: Original strand, 52473966 - 52474141
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacc 516  Q
    |||||||||||||||||| || ||||||||||||| || |||||||||| |  |||||||||||||||||||||  |||||| ||   ||| |||||||     
T  52473966 ttttcttttttaaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaact 52474065  T
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc 592  Q
    ||||| |||| ||||||| |  |||||||||||||||| |||| |||||||||||||| ||||||||| |||||||    
T  52474066 ttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaaccc 52474141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 422 - 609
Target Start/End: Complemental strand, 18654788 - 18654600
Alignment:
Q  422 ttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttta 521  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| ||||| |||  ||| |||||||  || |    
T  18654788 ttttttaaattacggactatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttca 18654689  T
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||| |||| || | |||||||||||||||||||||  ||||||||||  || ||| ||||| ||||||||  ||| |||||||||||    
T  18654688 aaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacacaccct 18654600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 412 - 611
Target Start/End: Original strand, 14898022 - 14898226
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgt 511  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||  ||  ||| | |    
T  14898022 tttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcgtgttaatatat 14898121  T
Q  512 taacctt----ttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacac 606  Q
    |||| ||      |||||||||||  |  ||||||||||||||||||||||  ||||  |||  ||| ||||| |||||||||||| |||  ||||||||    
T  14898122 taactttaaaaaaaaaaaacattttgtaatgtccgtaatttaaaaatgaaagctaaattctctcctctcttcctctcttaaaccctcaattcaaacacac 14898221  T
Q  607 cctta 611  Q
    |||||    
T  14898222 cctta 14898226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 368 - 502
Target Start/End: Complemental strand, 28582756 - 28582617
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||  |||| ||||||||||||     |  |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||    
T  28582756 tttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagata 28582657  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatg 502  Q
    ||||| ||||| |||||||||||||| |||||||||||||    
T  28582656 aatcaagtgtggttgaagtattatattatcgtttattatg 28582617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 371 - 591
Target Start/End: Complemental strand, 41040186 - 41039969
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||||||| | |||   |||| |||||  |||||||||||||||  ||||||||||| || || |||||||| |||| |||||||||  | |     
T  41040186 agggtgtgtttggattggggg---aggaagggaggagagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagc 41040090  T
Q  471 gtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||||||||||||||||| |||||| |||  ||| ||||||| ||||| |||| ||||||| ||||| ||||||||||| |||||| |||| ||| |    
T  41040089 gtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaattaaagcctac 41039990  T
Q  571 tctcacttcccctcttaaacc 591  Q
     ||| ||||||||| ||||||    
T  41039989 gctctcttcccctcctaaacc 41039969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 418 - 559
Target Start/End: Original strand, 55327422 - 55327563
Alignment:
Q  418 tttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacct 517  Q
    ||||||||||||||||| ||||| |||||||| |||||| ||||||||||  ||||||||||| |||||||| ||||||||||||  |||  | |||| |    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  518 tttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    |||||||||||||||||  ||||||| ||||||||| |||||    
T  55327522 tttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 440 - 557
Target Start/End: Complemental strand, 16275875 - 16275758
Alignment:
Q  440 atataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgt 539  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| |||  |||  |||||| ||||| ||||||||||||  |||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgt 16275776  T
Q  540 ccgtaatttaaaaatgaa 557  Q
    ||| ||||||||||||||    
T  16275775 ccgaaatttaaaaatgaa 16275758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 368 - 497
Target Start/End: Original strand, 46204883 - 46205017
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagggga---gacgagggt--ttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||| |||||||||||||||||||||| ||| ||   || ||| ||  |||||||||||||||||||||   ||||||||||||||||||||||||||    
T  46204883 tttaggatgtgtttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaata 46204982  T
Q  463 aatcatgtgtgattgaagtattatatgatcgttta 497  Q
    ||| | |||||||||||||||||||||||| ||||    
T  46204983 aattaagtgtgattgaagtattatatgatcattta 46205017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 54574602 - 54574473
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||||||| |||||||||||| ||||   ||  ||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||| |     
T  54574602 ttagggtgtgtttggattgagggtttaggaagggaagggatagtttgtttttctttttttaattacagactatataacacgtttttctaaaataaattaa 54574503  T
Q  469 gtgtgattgaagtattatatgatcgtttat 498  Q
    | |||||||||||||||||| | |||||||    
T  54574502 gcgtgattgaagtattatataaccgtttat 54574473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 417 - 593
Target Start/End: Complemental strand, 27542124 - 27541948
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacc 516  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||| |||  ||| |||||       
T  27542124 ttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgttagat 27542025  T
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    |||||| ||  ||||||| |||||  ||||||||||||||||  | |||| ||  ||| ||||||||| ||||||||    
T  27542024 ttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccct 27541948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 415 - 565
Target Start/End: Original strand, 37807129 - 37807279
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaa-tcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgtta 513  Q
    |||||||||||||||| |||  |||||||||||| |||||  |||||||| | | |||||||||||||||||||||||||||||| |||  ||| | |||    
T  37807129 acttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatatta 37807227  T
Q  514 accttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    || |||||||||||||||||| ||||||  |||||||||| ||||| |||||    
T  37807228 actttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaac 37807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 441 - 609
Target Start/End: Complemental strand, 36569072 - 36568904
Alignment:
Q  441 tataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtc 540  Q
    |||| |||||||||||||||||||| | ||||||||||| ||||||| ||| |||||| |||  ||| ||||||| |||| ||||||||||||| ||||     
T  36569072 tatatcatgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgtt 36568973  T
Q  541 cgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    || |||||||||||| ||||||||| |||| |||  |||| ||| ||||||||  ||| |||||||||||    
T  36568972 cgaaatttaaaaatg-aaaataaactctcccctccattccactcctaaaccctccatccaaacacaccct 36568904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 411 - 570
Target Start/End: Original strand, 52185060 - 52185217
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatg-tttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaattt 509  Q
    ||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||| |  | | |||||||||||||||||| |||||| |||  ||| |    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatat 52185159  T
Q  510 gttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    |||||| ||||| |||| ||||  | |||||| |||||||||||| |||||||||||||||    
T  52185160 gttaactttttataaaatattt--tagtgtccataatttaaaaat-aaaaataaaccctcc 52185217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 367 - 616
Target Start/End: Original strand, 34640998 - 34641241
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatc 466  Q
    ||||||||||||||||||| ||||||||||||||||||     || | |||||| |||||||||||||  || || ||| | | |||| ||||||||||     
T  34640998 ttttagggtgtgtttggattgagggtttaggaggggag-----ggctcacttttattttttaaattacgaacaatgtaaaaggattttttaaaataaatt 34641092  T
Q  467 atgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaa---ccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataa 563  Q
    | ||||  |||||||||||||||||| ||||| |||     |||||||     ||||  ||| ||||| ||  ||||||||||||||||| ||||| |||    
T  34641093 aagtgtttttgaagtattatatgatcatttatcatg-----ttgttaattcaattttctaaatcattttataatgtccgtaatttaaaaaagaaaagtaa 34641187  T
Q  564 accctcctctcacttcccctcttaaaccct-aatctaaacacacccttagtgtg 616  Q
     |||||| ||| ||||||||| ||||||||  ||| ||||||||||||||||||    
T  34641188 gccctcccctcccttcccctcctaaaccctccatccaaacacacccttagtgtg 34641241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 417 - 593
Target Start/End: Complemental strand, 10748490 - 10748312
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatg-------atcgtttattatgaaaattt 509  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||||| | |||||||  ||||||||||||       ||| ||||| |||  ||| |    
T  10748490 tttttttttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatat 10748391  T
Q  510 gttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    |||||| ||||||||||||||| ||  || ||||||||||||||||     ||||| ||| |||| ||||||||| ||||||||    
T  10748390 gttaactttttaaaaaacattttataatgcccgtaatttaaaaatg-----taaactctcttctcccttcccctcctaaaccct 10748312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 411 - 559
Target Start/End: Complemental strand, 40464070 - 40463922
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    ||||||||||||||| ||||| |  | ||| ||||||| |||||||||||||||| | ||| ||||||| | ||||||||| |||||| |||  | | |     
T  40464070 gtttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattgaatttttatatgattgtttatcatgttattgtt 40463971  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    ||||  |||||||||||| || || ||||||||||||||||||||||||    
T  40463970 ttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaa 40463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 407 - 534
Target Start/End: Complemental strand, 43005942 - 43005815
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    |||| |||| |||||||||||||||| || |||||||||||| ||||||||||||||||    | ||||||||||||||||||||  ||||| ||   ||    
T  43005942 gaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaatttaatttgattgaagtattatatgatattttatcatattaa 43005843  T
Q  507 tttgttaaccttttaaaaaacatttcat 534  Q
    | ||||||| |||||||||| |||||||    
T  43005842 tatgttaactttttaaaaaatatttcat 43005815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 374 - 488
Target Start/End: Complemental strand, 6803442 - 6803323
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgagg-----gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    |||||||||||| || ||||||||||||||   ||||     ||||| |||||||||||||||||||||||||  || | |||||| |||||||||| ||    
T  6803442 gtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactatgcaataagtttttataaaataaattat 6803343  T
Q  469 gtgtgattgaagtattatat 488  Q
    ||||||||||| ||||||||    
T  6803342 gtgtgattgaactattatat 6803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 375 - 492
Target Start/End: Original strand, 12790377 - 12790498
Alignment:
Q  375 tgtgtttggatcgagggtttaggaggggagacgag----ggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgt 470  Q
    ||||||||||| ||||||||||||| |||   |||    ||||||||||||||||||| |||  || |||||||||||||||||||| ||||||| | ||    
T  12790377 tgtgtttggattgagggtttaggagaggaagagagaggaggtttacttttcttttttatattgtaggctatataacatgtttttctataataaattaagt 12790476  T
Q  471 gtgattgaagtattatatgatc 492  Q
    || || |||||| |||||||||    
T  12790477 gtaatcgaagtaatatatgatc 12790498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 538 - 612
Target Start/End: Complemental strand, 24560289 - 24560214
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccc-taatctaaacacacccttag 612  Q
    |||||||||||||||| |||||| ||||||||| ||| ||||||||| ||||||| ||||| ||||||||||||||    
T  24560289 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacacccttag 24560214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 469 - 574
Target Start/End: Complemental strand, 13083003 - 13082890
Alignment:
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaa--------acatttcatcgtgtccgtaatttaaaaatgaaaaa 560  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||| ||| |||||        ||||||||| ||||||||| ||||||||| ||||     
T  13083003 gtgtaattgaagtattatatgatcgtttattatgttaatatgttaacttttaaaaaataaaaaaaacatttcatagtgtccgtattttaaaaataaaaat 13082904  T
Q  561 taaaccctcctctc 574  Q
    |||||| |||||||    
T  13082903 taaaccttcctctc 13082890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 407 - 498
Target Start/End: Complemental strand, 54996880 - 54996792
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||| |||||||||||||||||||||||||   ||||| |||||| | |||||| ||| | |||||||||||||||||||||||| |||||    
T  54996880 gaggggttacttttcttttttaaattacaga--ttataaaatgtttat-taaaatgaatgaagtgtgattgaagtattatatgatcatttat 54996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 25655144 - 25655218
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||||||||  |||||||||| ||| |||| |||||| |||||| |||| |||||||||||||    
T  25655144 gtccgtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctcaatccaaacacaccctta 25655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 41110493 - 41110567
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||||||  ||||||| |||| |||||||||||||    
T  41110493 gtccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacaccctta 41110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 363 - 492
Target Start/End: Original strand, 49815424 - 49815547
Alignment:
Q  363 tatcttttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagacta-tataacatgtttttctaaaat 461  Q
    |||||||| |||| |||| |||| |||||||| |||||||||     || ||||||||||||||||||||||| | || ||||| ||||||||  |||||    
T  49815424 tatcttttggggtatgttgggatggagggttttggaggggag-----ggcttacttttcttttttaaattaca-agtactataaaatgttttt-aaaaat 49815516  T
Q  462 aaatcatgtgtgattgaagtattatatgatc 492  Q
    |||| | | ||||||||||||||||||||||    
T  49815517 aaattaagcgtgattgaagtattatatgatc 49815547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 498
Target Start/End: Original strand, 40858573 - 40858697
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||||||||||| |||||| ||||| |||||     || | |||||| |||||||||||||  || || ||| |||||||| ||||||||||       
T  40858573 ttagggtgtgtttggattgagggtctaggatgggag-----ggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattta 40858667  T
Q  469 gtgtgattgaagtattatatgatcgtttat 498  Q
    ||||  |||||||||||||||||| |||||    
T  40858668 gtgtttttgaagtattatatgatcatttat 40858697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 498
Target Start/End: Complemental strand, 42699848 - 42699724
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    ||||||||| |||||||||||||||||||||||     ||||  | ||||||  ||||||||||||  || |||||| || |||||  ||||||||| |     
T  42699848 ttagggtgtttttggatcgagggtttaggaggg-----gaggactcactttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaa 42699754  T
Q  469 gtgtgattgaagtattatatgatcgtttat 498  Q
    ||||  |||||||||||||||||| |||||    
T  42699753 gtgtttttgaagtattatatgatcatttat 42699724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 593
Target Start/End: Original strand, 26135968 - 26136024
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    ||||||||||||||||| ||||| |||||||||| ||| ||||||||| ||||||||    
T  26135968 tgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccct 26136024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 615
Target Start/End: Complemental strand, 28581292 - 28581180
Alignment:
Q  504 aaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaac 602  Q
    |||| ||||||| |||||||||| ||||||   | || |||||||||||||||||| |||||||||| ||| ||||| ||  ||||||||  ||| ||||    
T  28581292 aaatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaac 28581193  T
Q  603 acacccttagtgt 615  Q
    |||| ||||||||    
T  28581192 acactcttagtgt 28581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 407 - 498
Target Start/End: Original strand, 37236964 - 37237054
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||| ||||||||| ||||||||||||||||  || || ||||||||  ||||||||| | |||||||||||||| || |||||| |||||    
T  37236964 gagggcttacttttcatttttaaattacagacgctacaaaatgttttt-gaaaataaattaagtgtgattgaagtactaaatgatcatttat 37237054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 40858798 - 40858741
Alignment:
Q  372 gggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    |||||||||||||| |||||||||||||||     ||||||||| ||||||||||||||||||    
T  40858798 gggtgtgtttggatggagggtttaggaggg-----gagggtttagttttcttttttaaattac 40858741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 434
Target Start/End: Original strand, 30200096 - 30200156
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||| |||||||||||||||     ||||||||| ||||| ||||||||||||    
T  30200096 ttagggtgtgtttggatggagggtttaggaggg-----gagggtttagttttcatttttaaattac 30200156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 498
Target Start/End: Complemental strand, 45663336 - 45663256
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| |||||| |||||| ||| |||||| || ||||| |||||||||| || |||||||||||||||||| |||| |||||    
T  45663336 tttttttttttcaattacggacaatataaaatattttt-taaaataaattatatgtgattgaagtattataagatcatttat 45663256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 48683852 - 48683815
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggaggggag 404  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  48683852 ttttagggtgtgtttggatagagggtttaggaggggag 48683815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 651971 - 651907
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaatta 433  Q
    ||||||||||||||| | |||||||||||| |||||  |||||||||||| |  |||||||||||    
T  651971 ttagggtgtgtttgggtggagggtttaggaagggaggggagggtttacttattgtttttaaatta 651907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 28582681 - 28582753
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||| |||| ||| | || |||||||||||    
T  28582681 gtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccct 28582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 418 - 498
Target Start/End: Complemental strand, 51819317 - 51819237
Alignment:
Q  418 tttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    |||| |||||||||   ||| ||||||| || ||||| ||||||||||   ||||||||||||||||||| ||||||||||    
T  51819317 tttcatttttaaatattagattatataatatatttttttaaaataaatttagtgtgattgaagtattatacgatcgtttat 51819237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 403
Target Start/End: Complemental strand, 24560468 - 24560429
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  24560468 atctcttagggtgtgtttggatggagggtttaggagggga 24560429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 37102159 - 37102217
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||| |||||||||||||||     ||||||||| ||||| ||||||||||||    
T  37102159 agggtgtgtttggatggagggtttaggaggg-----gagggtttagttttcatttttaaattac 37102217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 498
Target Start/End: Original strand, 46978441 - 46978559
Alignment:
Q  375 tgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtga 474  Q
    ||||||||||| |||||||||||||||     ||||||| ||||||  ||||||||||||  ||  | ||| |||||||| |||||||||| |  |||      
T  46978441 tgtgtttggattgagggtttaggaggg-----gagggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgttt 46978535  T
Q  475 ttgaagtattatatgatcgtttat 498  Q
    |||||||||||||| ||| |||||    
T  46978536 ttgaagtattatataatcatttat 46978559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 369 - 438
Target Start/End: Original strand, 9312474 - 9312543
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagac 438  Q
    ||||||| ||||||||| |||||||||  ||||||   ||||||||  ||||| ||||||||||||||||    
T  9312474 ttagggtatgtttggattgagggtttaataggggaagggagggtttgattttcatttttaaattacagac 9312543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 454
Target Start/End: Original strand, 18086027 - 18086068
Alignment:
Q  413 ttacttttcttttttaaattacagactatataacatgttttt 454  Q
    ||||||||||||||||||||||||||  ||||| ||||||||    
T  18086027 ttacttttcttttttaaattacagacattataaaatgttttt 18086068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 401
Target Start/End: Original strand, 18654597 - 18654630
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggaggg 401  Q
    |||||||||||||||||| |||||||||||||||    
T  18654597 tttagggtgtgtttggatggagggtttaggaggg 18654630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 21774018 - 21773958
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    |||||||||||||||||  ||||||||||||||     ||||||||||||||  ||||||||||||    
T  21774018 ttagggtgtgtttggatgaagggtttaggaggg-----gagggtttactttttatttttaaattac 21773958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 442 - 479
Target Start/End: Original strand, 31684362 - 31684399
Alignment:
Q  442 ataacatgtttttctaaaataaatcatgtgtgattgaa 479  Q
    |||||||||||||||||||||||| | |||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 41414317 - 41414280
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggaggggag 404  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  41414317 ttttagggtgtgtttggatggtgggtttaggaggggag 41414280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 115; Significance: 7e-58; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 371 - 609
Target Start/End: Complemental strand, 39434 - 39186
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggg-----gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||| ||||     |||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  39434 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaat 39335  T
Q  466 catgtgtgattgaag---tattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
     | ||||||||||||   |||||||||||| ||||| |||  ||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||    
T  39334 taagtgtgattgaagaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagta 39235  T
Q  563 aaccct-cctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||| || |||| |||||||| ||||||||  ||| |||||||||||    
T  39234 aaccctccccctcatttcccctcctaaaccctccatccaaacacaccct 39186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 39182 - 39255
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggagggga------gacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||||||| |||||||||||||||||      |  ||||||||||||||| ||||||||||||    
T  39182 ttttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattac 39255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 538 - 611
Target Start/End: Original strand, 39362 - 39436
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||||||||||||||| ||||| |||||||||| ||| ||| ||||  |||||||| |||| |||||||||||||    
T  39362 gtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccctta 39436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 1e-47; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 366 - 570
Target Start/End: Complemental strand, 21607093 - 21606884
Alignment:
Q  366 cttttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaa 460  Q
    ||||||| |||||||||||| |||||||||||||||||     || ||  |||||| |||| ||||||||||||| ||||||| | ||||||||||||||    
T  21607093 cttttagagtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaa 21606994  T
Q  461 taaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaa 560  Q
    ||||| | |||||| |||||||||||| |||||||||| |||  ||| ||||||| ||||| |||||||||||| || |||||||||||||||||||||     
T  21606993 taaataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaag 21606894  T
Q  561 taaaccctcc 570  Q
    ||||||||||    
T  21606893 taaaccctcc 21606884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 372 - 611
Target Start/End: Complemental strand, 9719273 - 9719029
Alignment:
Q  372 gggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatc 466  Q
    |||||||||||||| ||||||||| |||||||   |||||     |||| |||||||||||||||| | |||||||||||||| |||| |||| |||||     
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaatt 9719175  T
Q  467 atgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
      ||||||||||||||||||||||| |||||| |    ||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |    
T  9719174 tagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatc 9719075  T
Q  567 ctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    |||| ||| ||||||||| |||||||| |||| |||||||| ||||    
T  9719074 ctcccctcccttcccctcctaaaccctcaatccaaacacacgctta 9719029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 409 - 611
Target Start/End: Complemental strand, 9721338 - 9721136
Alignment:
Q  409 gggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatt 508  Q
    ||||||| |||||||||||||||| | ||| ||||||||||||||| |||| ||||    ||||||||||||||||||||||| |||||| |    |||     
T  9721338 gggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaaagttagtgtgattgaagtattatatgattgtttatcaaattaata 9721240  T
Q  509 tgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacc 607  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| | |||| |||||||||    
T  9721239 tgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacacc 9721140  T
Q  608 ctta 611  Q
    ||||    
T  9721139 ctta 9721136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 374 - 611
Target Start/End: Complemental strand, 30487546 - 30487304
Alignment:
Q  374 gtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    |||||||| ||| |||||||||||||||||     |  ||||||||| |||| ||||||||| ||| ||||||||||||||||||| ||||||||||||     
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaa 30487447  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccct 568  Q
    |||||||||||||||||||| || |||||| |||  ||| |||| || |||||||| |||||||||  ||||| |||||||| |||||||| | ||||||    
T  30487446 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtgaaccct 30487348  T
Q  569 cctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    || ||| ||||||||| ||||||||  ||| |||||||||||||    
T  30487347 cccctcccttcccctcctaaaccctccatccaaacacaccctta 30487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 407 - 570
Target Start/End: Original strand, 31849151 - 31849314
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || |||||| | |  ||    
T  31849151 gagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagtgtgattgaagtattatattattgtttatcacgttaa 31849250  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    | ||||||  |||||||| |||||| || |||||||||||||||||||||||| | ||||||||    
T  31849251 tatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccctcc 31849314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 411 - 615
Target Start/End: Original strand, 33235996 - 33236200
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |  ||||||||| |||||||||| |||||| |||  ||| ||    
T  33235996 gtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactgattgaagaattatatgattgtttatcatgttaatatg 33236095  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||| ||| | |||| |||  |||| ||| ||||| ||  ||| ||| |||||||    
T  33236096 ttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaactctccatccaaatacaccct 33236194  T
Q  610 tagtgt 615  Q
    ||||||    
T  33236195 tagtgt 33236200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 369 - 559
Target Start/End: Complemental strand, 4097759 - 4097563
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga---gacg--agggtttacttttcttttttaaattacagactatataacatgttttt-ctaaaata 462  Q
    |||| |||||||||||| ||||||||| |||||||   || |  |||||| |||||||||||||||||||| ||| ||||||||| ||||| | ||||||    
T  4097759 ttagagtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaata 4097660  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    ||| | |||||||||||||||||||||||||||||| |||  ||| ||||||| |||||||||||||||||  ||||||||||||||||||| ||||    
T  4097659 aattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaa 4097563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 428 - 581
Target Start/End: Original strand, 34176397 - 34176550
Alignment:
Q  428 aaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaac 527  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||  ||| ||||||| ||  ||||||     
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaat 34176496  T
Q  528 atttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttccc 581  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| |||| ||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaactaaactctcatctctcttccc 34176550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 369 - 570
Target Start/End: Original strand, 1300627 - 1300824
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaa-ataaatca 467  Q
    ||||||||||||||||| ||||||||||||||||||     ||||||||||   |||||||||||| || |||||||||| ||||| | || |||||| |    
T  1300627 ttagggtgtgtttggattgagggtttaggaggggag-----ggtttactttatgtttttaaattacggattatataacatatttttttcaagataaatta 1300721  T
Q  468 tgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccc 567  Q
     ||||||||||||||||||||||| |||||| | |  ||| ||||||| ||||| |||| |||||||  ||||||||||||||||||||||| |||||||    
T  1300722 agtgtgattgaagtattatatgattgtttatcaggttaatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccc 1300821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 426 - 560
Target Start/End: Complemental strand, 5585486 - 5585352
Alignment:
Q  426 ttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaa 525  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||| ||| |||||||||||||  ||| ||||| | |||||||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  526 acatttcatcgtgtccgtaatttaaaaatgaaaaa 560  Q
    ||||||||| |||| ||||||||||||| ||||||    
T  5585386 acatttcatagtgttcgtaatttaaaaaagaaaaa 5585352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 371 - 608
Target Start/End: Original strand, 10818229 - 10818459
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||   |||||     |||| |||||||||||||||||| ||| ||||||||||||||        ||||    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt--------aaat 10818320  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
         |||||||||||||||||||||| ||||| |||  ||| ||||||  |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10818321 -----gtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 10818415  T
Q  566 cctcctctcacttcccctcttaaaccct-aatctaaacacaccc 608  Q
    ||||| ||| || |||||| ||||| || |||| ||||||||||    
T  10818416 cctcccctccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 374 - 593
Target Start/End: Complemental strand, 19278278 - 19278051
Alignment:
Q  374 gtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    |||||||||||| ||| |||||||||||||     |  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||       
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaattta 19278180  T
Q  469 gtgtgattgaagtattatatgatcgtttattatg----aaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    || |||||||||||| |||||||||||||| |||     | || ||| ||| |||||||||| |||| || ||||| |||||||||||||||||| ||||    
T  19278179 gtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaa 19278080  T
Q  565 ccctcctctcacttcccctcttaaaccct 593  Q
    | |||  ||  ||||||||| ||||||||    
T  19278079 ctctctccttccttcccctcctaaaccct 19278051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 371 - 593
Target Start/End: Complemental strand, 16738239 - 16738013
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatc 466  Q
    ||||| ||||||||| |||||||||||| ||||    |  ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||      
T  16738239 agggtttgtttggattgagggtttaggatgggaaggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagt 16738140  T
Q  467 atgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
    | |||| ||| ||||||||||||||||| ||| |||  | | | ||||  | | |||||||||||||| || ||| ||||||||||| ||||| |||| |    
T  16738139 aagtgttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaatc 16738040  T
Q  567 ctcctctcacttcccctcttaaaccct 593  Q
     ||| ||| ||||| ||||||||||||    
T  16738039 ttcccctctcttcctctcttaaaccct 16738013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 424 - 540
Target Start/End: Original strand, 13583777 - 13583893
Alignment:
Q  424 ttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaa 523  Q
    |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||  ||  ||||||  |||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  524 aaacatttcatcgtgtc 540  Q
    ||||||||||| |||||    
T  13583877 aaacatttcatagtgtc 13583893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 371 - 593
Target Start/End: Original strand, 1390319 - 1390546
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---gacgaggg--tttacttttcttttttaaattacagactatataacatgttt-ttctaaaataaa 464  Q
    ||||||||||||||| ||||||||| |||||||   |  ||| |  |||| |||||||||| ||||||| |||||| |||||||||| ||||||||||||    
T  1390319 agggtgtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaa 1390418  T
Q  465 tcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    | | || |||||||| |||||| ||||| ||||| |||  ||| ||||||| |||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  1390419 ttaagtttgattgaaatattat-tgatcatttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaa 1390517  T
Q  565 ccctcctctcacttcccctcttaaaccct 593  Q
     || |  |||  |||||||| ||||||||    
T  1390518 acccctcctccattcccctcctaaaccct 1390546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 371 - 609
Target Start/End: Original strand, 14515473 - 14515715
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaat 465  Q
    ||||||||||||||| |||||||||||||||||     |  ||||||||  |||||||||||||||||| ||||| ||||  ||||| ||||||||||||    
T  14515473 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagataa--tgtttctctaaaataaat 14515570  T
Q  466 catgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
     | |||||| ||||||||||||| ||| ||||| |||   || |||||||  || |||||| |||| || |||| | ||||||||||||||||  |||||    
T  14515571 taagtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaac 14515670  T
Q  566 cctcctctcacttcccctcttaaaccct-aatctaaacacaccct 609  Q
    |||||  |  ||||||||| ||||||||  ||| |||||||||||    
T  14515671 cctccctttccttcccctcctaaaccctccatccaaacacaccct 14515715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 411 - 611
Target Start/End: Complemental strand, 666046 - 665839
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttc------taaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaa 504  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||        ||||| |||| | ||||| |||||||||||||| ||| ||||| |||      
T  666046 gtttatttttcttttttaaactacagactatacaacatgttttataaaaaataaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgtt 665947  T
Q  505 aatttgttaaccttttaaaaa-acatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccctaatctaaaca 603  Q
    ||| ||||||  |||| |||| |||||||||  | | | ||||||||||||||||||| |||||||| ||||||||||||| |||||||| ||| |||||    
T  665946 aatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccctcatccaaaca 665847  T
Q  604 caccctta 611  Q
    ||||||||    
T  665846 caccctta 665839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 364 - 488
Target Start/End: Original strand, 2893623 - 2893752
Alignment:
Q  364 atcttttagggtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaa 458  Q
    |||||||| ||||||||||||| |||||||| ||| |||| | ||| |     |||||||||| |||||||| |||||||||||||||||||||||||||    
T  2893623 atcttttaaggtgtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaa 2893722  T
Q  459 aataaatcatgtgtgattgaagtattatat 488  Q
    ||||||| | |||||||||| |||||||||    
T  2893723 aataaattaagtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 417 - 558
Target Start/End: Complemental strand, 10348992 - 10348850
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgt-ttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaac 515  Q
    |||| ||||||||||||| ||||||||||||||| |||| |||||||| ||| ||| |||||||||||||||| |||||||||  |   ||| |||||||    
T  10348992 tttttttttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaac 10348893  T
Q  516 cttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaa 558  Q
     |||||||| | |||||||  | ||||||||||||||||||||    
T  10348892 tttttaaaagatatttcatattatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 369 - 482
Target Start/End: Complemental strand, 12811226 - 12811108
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga-----gacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataa 463  Q
    ||||||||||||||||| |||||||||||| ||||     |  ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  12811226 ttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataa 12811127  T
Q  464 atcatgtgtgattgaagta 482  Q
    || | ||||||||||||||    
T  12811126 attaagtgtgattgaagta 12811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 374 - 564
Target Start/End: Original strand, 33041473 - 33041660
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    |||||||||||| | ||||||||||| ||| | |||||     |||| ||||| ||||||||||| |||||||||||  ||||||| |||||||||| |     
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaa 33041572  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    ||||||||||||| |||        ||||| |||  ||| ||||||| |||||||||||||||||| || |||||||||||||||| |||||||||    
T  33041573 gtgtgattgaagtgtta--------tttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaa 33041660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 412 - 498
Target Start/End: Complemental strand, 2892801 - 2892715
Alignment:
Q  412 tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||||||    
T  2892801 tttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagtgtgattgaaatattatatgattgtttat 2892715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 6034275 - 6034201
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagt 481  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||    
T  6034275 gaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 407 - 502
Target Start/End: Original strand, 16509322 - 16509416
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatg 502  Q
    ||||| ||||||||||||||| ||||| ||||  ||||| ||||||||  ||||||||||| |||||||||||||||||||||||| | |||||||    
T  16509322 gagggcttacttttcttttttgaattaaagacactataaaatgttttta-aaaataaatcaagtgtgattgaagtattatatgatcatctattatg 16509416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 538 - 612
Target Start/End: Complemental strand, 14515545 - 14515470
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacacccttag 612  Q
    |||||||||||||||| |||||| ||||||||| ||| ||||||||| |||||||| |||| ||||||||||||||    
T  14515545 gtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacacccttag 14515470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 423 - 564
Target Start/End: Original strand, 1395692 - 1395834
Alignment:
Q  423 tttttaaattacagactatataacatgtttttc-taaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacctttta 521  Q
    ||||| |||||| |||||| ||||||||||||  |||||||||| | ||||||||||| || || |||||| ||||| |||  ||| ||||||  |||||    
T  1395692 ttttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttta 1395791  T
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    |||||||||  |  ||||  |||||||||||||||||| ||||    
T  1395792 aaaaacattctacagtgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 407 - 498
Target Start/End: Complemental strand, 2893049 - 2892955
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgt-ttttctaaaataaa-tcat-gtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||||||||||||||||||  ||||||||| || | |||| | ||||||| | || ||||||||||||||||||||||||||||||    
T  2893049 gagggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttat 2892955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 566
Target Start/End: Original strand, 2900017 - 2900110
Alignment:
Q  473 gattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaacc 566  Q
    |||||| |||||||||||| |||||| |||  ||| ||||||| | ||| |||||||||||| |||||  ||||||||||||||||| ||||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaacc 2900110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 537 - 611
Target Start/End: Complemental strand, 10818302 - 10818227
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacaccctta 611  Q
    ||||||||||||||||| |||||||||||  ||| ||| ||||||||| |||||||| |||| |||||||||||||    
T  10818302 tgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacaccctta 10818227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 377 - 492
Target Start/End: Original strand, 26318317 - 26318431
Alignment:
Q  377 tgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgatt 476  Q
    ||||||| | |||||||||||| ||| || ||||||| | |||| |||||||||||||  |  |||||| |||||||| |||||||||| | ||||  ||    
T  26318317 tgtttgggtggagggtttaggaaggg-gaggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgttttt 26318415  T
Q  477 gaagtattatatgatc 492  Q
    ||||||||||||||||    
T  26318416 gaagtattatatgatc 26318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 436 - 498
Target Start/End: Original strand, 25741477 - 25741539
Alignment:
Q  436 gactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||||||||| |||||||||| | | |||| |||||| ||||||||||||||||    
T  25741477 gactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttat 25741539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 374 - 558
Target Start/End: Complemental strand, 30850153 - 30849966
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggg---gagacg--agggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    |||||||||||| |||||||||||||||   |||| |  || |||||||||| | ||||||||||   | ||||||| |||||||| ||||| ||||       
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaattta 30850054  T
Q  469 gtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaa 558  Q
    || | ||||||||||||||||||||||||| |||  | | | ||||  |||||||||| |||| || || | ||||||||||||| ||||    
T  30850053 gtataattgaagtattatatgatcgtttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaa 30849966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 21606854 - 21606912
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattac 434  Q
    ||||||||||||||| |||||||||||||||     ||||||||||||||| ||||||||||||    
T  21606854 agggtgtgtttggatggagggtttaggaggg-----gagggtttacttttcatttttaaattac 21606912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 537 - 606
Target Start/End: Original strand, 4097684 - 4097754
Alignment:
Q  537 tgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacac 606  Q
    ||||||||||||||||| ||||| | |||||| | ||| |||||||||||||||||| |||| ||||||||    
T  4097684 tgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 570
Target Start/End: Original strand, 9298628 - 9298690
Alignment:
Q  509 tgttaaccttttaaaa-aacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcc 570  Q
    ||||||| |||||||| ||||||||||  |||||||||||||||| |||||| ||||||||||    
T  9298628 tgttaactttttaaaaaaacatttcataatgtccgtaatttaaaattgaaaagtaaaccctcc 9298690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 422 - 498
Target Start/End: Complemental strand, 14548794 - 14548718
Alignment:
Q  422 ttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||||| ||| |||||| ||||| || |||||||||| |  ||||||||||  ||||||||||| |||||    
T  14548794 ttttttaaattacggacaatataaaatgttattttaaaataaattaactgtgattgaaccattatatgatcatttat 14548718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Original strand, 15323221 - 15323257
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15323221 ttttagggtgtgtttggattgagggtttaggagggga 15323257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 367 - 403
Target Start/End: Original strand, 15353360 - 15353396
Alignment:
Q  367 ttttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||||| |||||||||||||||||    
T  15353360 ttttagggtgtgtttggattgagggtttaggagggga 15353396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 593
Target Start/End: Complemental strand, 31849174 - 31849127
Alignment:
Q  546 tttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    |||||||| ||||| |||||||||| ||| ||||||||||||||||||    
T  31849174 tttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccct 31849127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 14515717 - 14515683
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggagggga 403  Q
    ||||||||||||||||| |||||||||||||||||    
T  14515717 ttagggtgtgtttggatggagggtttaggagggga 14515683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 522 - 559
Target Start/End: Complemental strand, 12811071 - 12811034
Alignment:
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaa 559  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  12811071 aaaaacatttcatagtgtctgtaatttaaaaatgaaaa 12811034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 538 - 606
Target Start/End: Original strand, 19278210 - 19278278
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacac 606  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||| ||||| || |||| ||||||||    
T  19278210 gtccgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 95; Significance: 6e-46; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 407 - 593
Target Start/End: Complemental strand, 16499 - 16313
Alignment:
Q  407 gagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaa 506  Q
    ||||||||||||||| ||||||| | || ||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||| |||  ||    
T  16499 gagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaa 16400  T
Q  507 tttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    | ||||||| ||||| |||||||||||| |||| | ||||||||||||||||| |||||||||| |||  || ||||| ||||||||    
T  16399 tatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccct 16313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 411 - 565
Target Start/End: Original strand, 15995 - 16149
Alignment:
Q  411 gtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttg 510  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||| || |||| | ||   ||| ||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatg 16094  T
Q  511 ttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaac 565  Q
    ||||| ||||||||||||||||||  | |||||||||||||||||||||||||||    
T  16095 ttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaac 16149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 88; Significance: 9e-42; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 368 - 570
Target Start/End: Original strand, 6581 - 6787
Alignment:
Q  368 tttagggtgtgtttggatcgagggtttaggagg-----ggagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaata 462  Q
    |||||||||||||||||| || | |||||||||     ||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  6581 tttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaata 6680  T
Q  463 aatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaata 562  Q
    |||   ||||||||||||||||||||||||||||| ||||  ||| | ||||  |||| ||||| ||||||| |||| ||||||||||||| ||||| ||    
T  6681 aatttagtgtgattgaagtattatatgatcgttta-tatgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagta 6779  T
Q  563 aaccctcc 570  Q
    | ||||||    
T  6780 agccctcc 6787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 374 - 566
Target Start/End: Original strand, 1175 - 1372
Alignment:
Q  374 gtgtgtttggatcgagggtttaggaggggagacgaggg-----tttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcat 468  Q
    |||||||||||| |||||||||||||||||   |||||     ||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||        
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaattaa---- 1270  T
Q  469 gtgtgattgaagtat----tatatgatcgtttattatgaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaa 564  Q
    || ||| ||||||||    ||||||||||||||| |||| ||| ||||||| |||||||||||||||||| |||| | ||||||||||||||||| ||||    
T  1271 gtatgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaa 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 1244 - 1175
Alignment:
Q  538 gtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacac 606  Q
    |||||||||||||||| ||||| ||||| |||| ||| ||||||||| |||||||| |||| ||||||||    
T  1244 gtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 402 - 569
Target Start/End: Original strand, 18807 - 18972
Alignment:
Q  402 gagacgagggtttacttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattat 501  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||| ||||| ||    
T  18807 gagaggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcat 18904  T
Q  502 gaaaatttgttaaccttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctc 569  Q
    |  ||| | ||||| | |||||||| | ||||| ||||||   ||||||||||||||| |||||||||    
T  18905 gttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccctc 18972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 417 - 593
Target Start/End: Original strand, 15314 - 15489
Alignment:
Q  417 ttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatcgtttattatgaaaatttgttaacc 516  Q
    |||| ||||||||| ||| || || |||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||| | |  ||| |||| |||    
T  15314 tttttttttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgacc 15413  T
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct 593  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| || | |||| | || |||||| || ||||||||    
T  15414 ttttaaaaaaca-ttcatagtgtccgtaatttaaaaataaaaagtagatcctcatttcccttcccttcctaaaccct 15489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 435
Target Start/End: Complemental strand, 17782 - 17715
Alignment:
Q  371 agggtgtgtttggatcgagggtttaggagggga---gacgagggtttacttttcttttttaaattaca 435  Q
    ||||||||||||||| ||||||||||||| |||   || | |||||||||||||||||||||||||||    
T  17782 agggtgtgtttggatggagggtttaggagtggaagggaggggggtttacttttcttttttaaattaca 17715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 522 - 606
Target Start/End: Complemental strand, 3235 - 3150
Alignment:
Q  522 aaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccctcttaaaccct-aatctaaacacac 606  Q
    ||||||||||||| ||||| |||||||||||| ||||| ||||| |||| ||| ||||||||| ||||| || |||| ||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 184609 - 184689
Alignment:
Q  369 ttagggtgtgtttggatcgagggtttaggaggggagacgagggtttacttttcttttttaaattacagactatataacatgttttt 454  Q
    ||||||||||||||||| |||||||||||||||     ||||||| |||||| ||||||||||||   ||||||||| ||||||||    
T  184609 ttagggtgtgtttggattgagggtttaggaggg-----gagggttcacttttattttttaaattatgaactatataaaatgttttt 184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 517 - 583
Target Start/End: Original strand, 242367 - 242433
Alignment:
Q  517 ttttaaaaaacatttcatcgtgtccgtaatttaaaaatgaaaaataaaccctcctctcacttcccct 583  Q
    ||||||||| ||||| ||  ||||||||||||||||| ||||| |||||||||| ||| ||||||||    
T  242367 ttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccct 242433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 492
Target Start/End: Original strand, 37432 - 37509
Alignment:
Q  415 acttttcttttttaaattacagactatataacatgtttttctaaaataaatcatgtgtgattgaagtattatatgatc 492  Q
    |||||| |||||||||||||  || || ||| |||||||| |||||||||||| ||||  ||||||| ||||||||||    
T  37432 acttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatcaagtgtttttgaagtgttatatgatc 37509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 81564 - 81523
Alignment:
Q  457 aaaataaatcatgtgtgattgaagtattatatgatcgtttat 498  Q
    ||||||||||| || ||||||||||||||||||||| |||||    
T  81564 aaaataaatcaagtatgattgaagtattatatgatcatttat 81523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University