View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4604-Insertion-7 (Length: 894)

Name: NF4604-Insertion-7
Description: NF4604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4604-Insertion-7
NF4604-Insertion-7
[»] chr4 (101 HSPs)
chr4 (547-894)||(9462131-9462477)
chr4 (8-87)||(9462050-9462129)
chr4 (155-230)||(20224944-20225019)
chr4 (155-230)||(48598923-48598998)
chr4 (155-260)||(5648219-5648324)
chr4 (155-260)||(6430695-6430800)
chr4 (156-260)||(16408672-16408777)
chr4 (343-427)||(20639655-20639738)
chr4 (153-260)||(21646922-21647030)
chr4 (343-427)||(30352577-30352661)
chr4 (347-427)||(33836484-33836564)
chr4 (155-230)||(5306763-5306838)
chr4 (155-230)||(17315398-17315473)
chr4 (348-427)||(23501848-23501927)
chr4 (155-260)||(16911522-16911628)
chr4 (355-424)||(44363130-44363199)
chr4 (155-230)||(10660364-10660439)
chr4 (155-230)||(10874509-10874584)
chr4 (155-230)||(14590797-14590872)
chr4 (155-210)||(23501753-23501808)
chr4 (155-230)||(47528628-47528703)
chr4 (155-260)||(30639340-30639445)
chr4 (343-424)||(20225130-20225211)
chr4 (155-223)||(11054253-11054321)
chr4 (343-427)||(16408598-16408682)
chr4 (343-426)||(13256397-13256480)
chr4 (155-230)||(37494811-37494886)
chr4 (343-425)||(16911618-16911700)
chr4 (343-421)||(21647020-21647098)
chr4 (366-424)||(38755908-38755966)
chr4 (343-396)||(16494273-16494326)
chr4 (366-427)||(32484310-32484371)
chr4 (158-230)||(487235-487306)
chr4 (155-223)||(5313101-5313169)
chr4 (343-426)||(5648314-5648395)
chr4 (361-424)||(11394924-11394987)
chr4 (361-424)||(11404651-11404714)
chr4 (170-260)||(19027823-19027914)
chr4 (348-426)||(25629110-25629186)
chr4 (155-230)||(30352691-30352766)
chr4 (343-424)||(20225038-20225117)
chr4 (366-424)||(25388253-25388311)
chr4 (343-424)||(30690176-30690255)
chr4 (361-427)||(38786681-38786747)
chr4 (370-424)||(40553937-40553991)
chr4 (160-230)||(42164248-42164317)
chr4 (366-424)||(44718644-44718702)
chr4 (289-344)||(49268746-49268805)
chr4 (343-423)||(6430627-6430705)
chr4 (343-427)||(9987831-9987913)
chr4 (343-427)||(10660460-10660544)
chr4 (343-427)||(10874605-10874689)
chr4 (343-427)||(30639435-30639517)
chr4 (374-427)||(35532077-35532130)
chr4 (343-427)||(20908633-20908716)
chr4 (343-422)||(29207900-29207977)
chr4 (343-427)||(36816381-36816464)
chr4 (343-426)||(54175119-54175202)
chr4 (158-230)||(54640439-54640510)
chr4 (155-206)||(20405053-20405104)
chr4 (361-428)||(35567242-35567309)
chr4 (171-230)||(43035224-43035283)
chr4 (343-425)||(51865037-51865117)
chr4 (184-230)||(25463111-25463157)
chr4 (158-230)||(32629368-32629436)
chr4 (168-230)||(40915802-40915864)
chr4 (178-260)||(41018863-41018945)
chr4 (156-230)||(54966983-54967056)
chr4 (348-423)||(7909281-7909355)
chr4 (343-427)||(11054145-11054227)
chr4 (292-344)||(28972531-28972588)
chr4 (343-423)||(40915884-40915962)
chr4 (343-427)||(47444013-47444095)
chr4 (356-425)||(47482849-47482918)
chr4 (343-427)||(47528527-47528609)
chr4 (351-428)||(54730314-54730391)
chr4 (289-344)||(1763369-1763429)
chr4 (343-423)||(8473621-8473701)
chr4 (343-426)||(9832311-9832392)
chr4 (155-219)||(13256508-13256572)
chr4 (361-425)||(14983906-14983970)
chr4 (348-424)||(20405148-20405224)
chr4 (348-411)||(41018807-41018868)
chr4 (168-228)||(44363234-44363294)
chr4 (343-426)||(48598823-48598904)
chr4 (289-328)||(6377622-6377661)
chr4 (155-190)||(18969701-18969736)
chr4 (289-328)||(28185587-28185626)
chr4 (159-230)||(30496420-30496491)
chr4 (155-230)||(54730209-54730284)
chr4 (155-206)||(55766590-55766641)
chr4 (160-230)||(8473720-8473790)
chr4 (366-396)||(8820585-8820615)
chr4 (175-260)||(17043463-17043549)
chr4 (361-427)||(28494223-28494289)
chr4 (176-230)||(39077894-39077948)
chr4 (158-223)||(12257700-12257764)
chr4 (343-395)||(17043423-17043473)
chr4 (348-405)||(49938612-49938668)
chr4 (161-230)||(49938690-49938759)
chr4 (366-427)||(50555653-50555714)
[»] chr2 (75 HSPs)
chr2 (155-260)||(14530278-14530384)
chr2 (155-260)||(12023988-12024093)
chr2 (343-424)||(10543754-10543835)
chr2 (155-260)||(8455385-8455491)
chr2 (155-260)||(10543658-10543764)
chr2 (348-424)||(14530379-14530455)
chr2 (155-230)||(11514396-11514471)
chr2 (155-260)||(24200694-24200800)
chr2 (343-427)||(10546219-10546301)
chr2 (343-425)||(9671235-9671315)
chr2 (166-260)||(17667973-17668068)
chr2 (155-230)||(21779359-21779434)
chr2 (155-230)||(23397726-23397801)
chr2 (350-425)||(23488544-23488619)
chr2 (155-230)||(25079818-25079893)
chr2 (289-344)||(42808528-42808583)
chr2 (343-425)||(24200622-24200704)
chr2 (344-426)||(31158437-31158519)
chr2 (155-230)||(9671140-9671216)
chr2 (343-425)||(8455315-8455395)
chr2 (166-260)||(17623535-17623630)
chr2 (155-230)||(17896219-17896294)
chr2 (361-427)||(14444800-14444866)
chr2 (173-230)||(5450263-5450320)
chr2 (155-228)||(22371017-22371090)
chr2 (343-427)||(25249735-25249817)
chr2 (343-427)||(36871548-36871629)
chr2 (155-231)||(19977813-19977889)
chr2 (155-223)||(25249844-25249912)
chr2 (361-425)||(44643595-44643659)
chr2 (343-425)||(11514492-11514571)
chr2 (155-222)||(17705455-17705522)
chr2 (155-202)||(27573581-27573628)
chr2 (366-429)||(34766332-34766395)
chr2 (170-260)||(40416940-40417031)
chr2 (155-260)||(7214494-7214600)
chr2 (348-425)||(21779260-21779335)
chr2 (366-424)||(25079717-25079775)
chr2 (348-425)||(5841089-5841166)
chr2 (161-230)||(39914406-39914475)
chr2 (366-423)||(40579750-40579807)
chr2 (158-230)||(44521473-44521544)
chr2 (155-230)||(14544023-14544098)
chr2 (366-425)||(34080178-34080237)
chr2 (167-230)||(44604826-44604889)
chr2 (159-229)||(24860087-24860157)
chr2 (184-260)||(19614981-19615058)
chr2 (376-425)||(22371199-22371248)
chr2 (361-426)||(26684618-26684683)
chr2 (292-344)||(26826982-26827039)
chr2 (156-260)||(32781357-32781461)
chr2 (171-259)||(33795261-33795350)
chr2 (348-424)||(40762234-40762308)
chr2 (366-427)||(41409939-41410000)
chr2 (289-342)||(44089183-44089236)
chr2 (343-412)||(44449395-44449463)
chr2 (158-230)||(99363-99434)
chr2 (155-223)||(5840988-5841056)
chr2 (186-260)||(10546153-10546229)
chr2 (158-230)||(17380336-17380407)
chr2 (155-195)||(39189556-39189596)
chr2 (158-210)||(44643486-44643537)
chr2 (369-424)||(8575975-8576030)
chr2 (155-198)||(27466262-27466305)
chr2 (171-230)||(29419989-29420048)
chr2 (159-190)||(39499354-39499385)
chr2 (366-425)||(39914305-39914363)
chr2 (343-428)||(17668058-17668141)
chr2 (343-396)||(32781316-32781367)
chr2 (172-230)||(34752762-34752820)
chr2 (359-424)||(14544136-14544201)
chr2 (361-426)||(17896332-17896397)
chr2 (348-424)||(23397825-23397899)
chr2 (343-427)||(24859985-24860067)
chr2 (343-395)||(24890467-24890517)
[»] chr5 (55 HSPs)
chr5 (155-260)||(38879541-38879647)
chr5 (155-230)||(1565391-1565466)
chr5 (155-260)||(4619175-4619281)
chr5 (343-425)||(38879637-38879719)
chr5 (155-260)||(41014279-41014384)
chr5 (155-228)||(43334162-43334235)
chr5 (155-230)||(35710273-35710348)
chr5 (155-230)||(37024654-37024729)
chr5 (343-426)||(43334259-43334341)
chr5 (155-260)||(24448850-24448956)
chr5 (155-260)||(8170053-8170157)
chr5 (346-423)||(12006329-12006406)
chr5 (155-230)||(23974741-23974815)
chr5 (343-425)||(4619103-4619185)
chr5 (348-425)||(16957375-16957450)
chr5 (155-260)||(27328712-27328818)
chr5 (343-424)||(13801767-13801848)
chr5 (343-427)||(24448946-24449028)
chr5 (353-424)||(25622524-25622595)
chr5 (343-425)||(27328808-27328890)
chr5 (155-224)||(22600414-22600483)
chr5 (343-425)||(32703478-32703558)
chr5 (366-425)||(39801593-39801652)
chr5 (366-427)||(16028621-16028682)
chr5 (343-426)||(8169982-8170063)
chr5 (343-423)||(20135660-20135740)
chr5 (158-230)||(39301087-39301158)
chr5 (155-230)||(22187245-22187320)
chr5 (155-210)||(22861786-22861841)
chr5 (171-230)||(28516534-28516593)
chr5 (343-425)||(41014374-41014454)
chr5 (343-425)||(29334451-29334532)
chr5 (343-424)||(34154814-34154893)
chr5 (349-405)||(10306493-10306548)
chr5 (348-424)||(12575660-12575735)
chr5 (373-425)||(32354211-32354263)
chr5 (158-210)||(39079886-39079937)
chr5 (160-230)||(12006430-12006500)
chr5 (155-230)||(31299592-31299667)
chr5 (155-204)||(2838738-2838788)
chr5 (158-228)||(10634248-10634317)
chr5 (343-429)||(11657694-11657779)
chr5 (343-424)||(16880647-16880726)
chr5 (155-205)||(19438709-19438759)
chr5 (343-425)||(28516432-28516513)
chr5 (366-424)||(30877564-30877622)
chr5 (184-230)||(32703413-32703459)
chr5 (361-427)||(35710383-35710449)
chr5 (361-415)||(43574678-43574732)
chr5 (178-238)||(1405170-1405231)
chr5 (360-421)||(21784335-21784396)
chr5 (343-424)||(22187341-22187422)
chr5 (155-251)||(30006285-30006382)
chr5 (292-325)||(34375172-34375205)
chr5 (292-325)||(35540634-35540667)
[»] chr1 (92 HSPs)
chr1 (343-425)||(35005202-35005284)
chr1 (343-426)||(18741955-18742038)
chr1 (155-230)||(34725196-34725271)
chr1 (155-260)||(18944626-18944732)
chr1 (155-260)||(30395797-30395903)
chr1 (155-260)||(32632626-32632731)
chr1 (155-260)||(46991787-46991893)
chr1 (350-427)||(50606487-50606564)
chr1 (343-425)||(20004089-20004171)
chr1 (342-427)||(45402174-45402257)
chr1 (348-425)||(10668309-10668386)
chr1 (343-427)||(18944722-18944807)
chr1 (343-428)||(27201726-27201811)
chr1 (155-223)||(22930174-22930242)
chr1 (155-223)||(47214494-47214562)
chr1 (155-230)||(14617021-14617096)
chr1 (343-424)||(4349717-4349796)
chr1 (159-260)||(18724614-18724715)
chr1 (155-229)||(20004193-20004267)
chr1 (348-426)||(42304205-42304283)
chr1 (343-428)||(46247949-46248032)
chr1 (155-260)||(46248022-46248128)
chr1 (366-427)||(43768239-43768300)
chr1 (155-230)||(9939443-9939519)
chr1 (157-260)||(19932824-19932925)
chr1 (155-223)||(34714606-34714674)
chr1 (155-210)||(18742081-18742136)
chr1 (159-230)||(20036208-20036278)
chr1 (155-230)||(38478380-38478455)
chr1 (155-210)||(40424725-40424780)
chr1 (158-251)||(22327086-22327179)
chr1 (155-260)||(23768389-23768495)
chr1 (343-425)||(30395725-30395807)
chr1 (155-260)||(41319875-41319981)
chr1 (366-427)||(1517308-1517369)
chr1 (343-427)||(45812534-45812616)
chr1 (155-258)||(8197026-8197130)
chr1 (350-425)||(9939547-9939623)
chr1 (155-230)||(10668203-10668283)
chr1 (343-395)||(19932782-19932834)
chr1 (155-223)||(25290146-25290214)
chr1 (155-223)||(45812642-45812710)
chr1 (289-344)||(4447794-4447849)
chr1 (155-230)||(27201630-27201705)
chr1 (366-425)||(27474380-27474439)
chr1 (155-230)||(45402078-45402152)
chr1 (158-228)||(2435889-2435958)
chr1 (158-228)||(2435995-2436064)
chr1 (366-428)||(46991904-46991966)
chr1 (172-260)||(25468332-25468421)
chr1 (343-427)||(31382211-31382293)
chr1 (343-427)||(35019309-35019390)
chr1 (348-427)||(23796549-23796626)
chr1 (155-223)||(27474264-27474332)
chr1 (361-425)||(34725097-34725161)
chr1 (343-426)||(35253185-35253266)
chr1 (155-210)||(19414422-19414477)
chr1 (343-425)||(19414516-19414596)
chr1 (348-427)||(19701654-19701732)
chr1 (343-422)||(22324971-22325049)
chr1 (159-230)||(33222971-33223042)
chr1 (366-425)||(33594130-33594189)
chr1 (168-230)||(6925096-6925158)
chr1 (158-228)||(6983911-6983980)
chr1 (150-208)||(12126957-12127015)
chr1 (348-425)||(14617122-14617197)
chr1 (361-427)||(30555210-30555276)
chr1 (343-428)||(38478278-38478361)
chr1 (159-208)||(4430148-4430197)
chr1 (366-427)||(6925200-6925261)
chr1 (343-419)||(23768325-23768399)
chr1 (348-424)||(35117765-35117842)
chr1 (307-344)||(48814129-48814166)
chr1 (158-223)||(50811926-50811990)
chr1 (343-395)||(6358200-6358251)
chr1 (348-427)||(47214593-47214670)
chr1 (158-230)||(52910204-52910275)
chr1 (159-230)||(11596501-11596571)
chr1 (343-425)||(12126836-12126916)
chr1 (347-422)||(15511150-15511224)
chr1 (158-260)||(17470415-17470517)
chr1 (343-425)||(32632556-32632636)
chr1 (171-230)||(35117868-35117927)
chr1 (383-426)||(50760238-50760281)
chr1 (361-419)||(4587568-4587626)
chr1 (350-412)||(45264411-45264472)
chr1 (348-426)||(50812024-50812100)
chr1 (158-203)||(15511278-15511322)
chr1 (369-426)||(16120819-16120876)
chr1 (307-344)||(20270593-20270630)
chr1 (158-238)||(35019217-35019297)
chr1 (158-226)||(44485213-44485280)
[»] chr8 (71 HSPs)
chr8 (155-260)||(7136598-7136704)
chr8 (153-230)||(20869596-20869673)
chr8 (155-230)||(12670348-12670423)
chr8 (155-230)||(30454195-30454270)
chr8 (155-260)||(28817695-28817801)
chr8 (155-260)||(36720756-36720862)
chr8 (155-260)||(39461065-39461171)
chr8 (155-260)||(29521754-29521860)
chr8 (343-425)||(39460993-39461075)
chr8 (155-260)||(44530109-44530215)
chr8 (155-238)||(20284164-20284248)
chr8 (155-238)||(21070793-21070877)
chr8 (158-230)||(28407379-28407451)
chr8 (155-230)||(2626479-2626554)
chr8 (343-425)||(12625946-12626026)
chr8 (159-230)||(17823540-17823611)
chr8 (155-222)||(24245411-24245478)
chr8 (159-260)||(6760786-6760888)
chr8 (155-260)||(13160662-13160767)
chr8 (348-426)||(16013515-16013593)
chr8 (171-260)||(22598133-22598223)
chr8 (155-260)||(35261639-35261745)
chr8 (348-428)||(35261740-35261818)
chr8 (343-427)||(7136524-7136608)
chr8 (343-427)||(20869979-20870063)
chr8 (348-427)||(6760883-6760962)
chr8 (159-230)||(18164859-18164930)
chr8 (343-418)||(20284075-20284150)
chr8 (343-418)||(21070703-21070778)
chr8 (155-260)||(8897833-8897939)
chr8 (343-425)||(26954189-26954271)
chr8 (347-427)||(26102577-26102655)
chr8 (348-427)||(8897761-8897838)
chr8 (147-223)||(25250474-25250550)
chr8 (366-426)||(28817624-28817684)
chr8 (174-230)||(35105902-35105958)
chr8 (158-230)||(44781606-44781677)
chr8 (343-426)||(25250578-25250661)
chr8 (361-424)||(28407475-28407538)
chr8 (343-425)||(36720852-36720932)
chr8 (343-425)||(44530205-44530285)
chr8 (348-411)||(44781517-44781580)
chr8 (343-424)||(13160757-13160836)
chr8 (343-424)||(29521685-29521764)
chr8 (361-427)||(30454094-30454160)
chr8 (155-260)||(45071225-45071330)
chr8 (343-427)||(12670247-12670329)
chr8 (343-424)||(16225075-16225156)
chr8 (177-230)||(31457155-31457208)
chr8 (343-423)||(45071320-45071398)
chr8 (375-427)||(27468089-27468141)
chr8 (289-344)||(37698567-37698620)
chr8 (155-248)||(11748259-11748353)
chr8 (366-423)||(27507987-27508044)
chr8 (158-223)||(42083806-42083870)
chr8 (343-384)||(43942380-43942421)
chr8 (366-426)||(10857906-10857966)
chr8 (291-344)||(18405319-18405374)
chr8 (289-344)||(27127153-27127213)
chr8 (343-422)||(29877150-29877227)
chr8 (159-223)||(31454152-31454216)
chr8 (369-425)||(31457252-31457308)
chr8 (361-425)||(35107310-35107374)
chr8 (348-426)||(5135288-5135363)
chr8 (155-230)||(26954092-26954167)
chr8 (343-424)||(2626578-2626657)
chr8 (164-230)||(12625858-12625924)
chr8 (376-426)||(18164758-18164808)
chr8 (366-415)||(8483947-8483996)
chr8 (292-349)||(30232764-30232820)
chr8 (292-344)||(44598941-44598998)
[»] chr7 (73 HSPs)
chr7 (155-260)||(46354154-46354260)
chr7 (156-260)||(11617657-11617762)
chr7 (146-238)||(42495926-42496019)
chr7 (155-257)||(2541091-2541195)
chr7 (155-223)||(47077960-47078028)
chr7 (155-230)||(48735220-48735296)
chr7 (155-230)||(21172107-21172182)
chr7 (155-230)||(32758221-32758296)
chr7 (156-230)||(10693171-10693245)
chr7 (145-223)||(35334921-35334999)
chr7 (155-260)||(42805484-42805590)
chr7 (155-260)||(43557432-43557538)
chr7 (155-230)||(7193045-7193120)
chr7 (160-230)||(19426989-19427059)
chr7 (155-260)||(42798629-42798735)
chr7 (348-426)||(42805585-42805663)
chr7 (155-260)||(47716419-47716525)
chr7 (343-427)||(7879694-7879776)
chr7 (155-228)||(14732924-14732997)
chr7 (157-230)||(27629596-27629669)
chr7 (158-230)||(48123584-48123655)
chr7 (155-230)||(5180257-5180332)
chr7 (155-230)||(7794606-7794681)
chr7 (155-230)||(18326994-18327069)
chr7 (343-428)||(27889312-27889395)
chr7 (169-230)||(33872009-33872070)
chr7 (343-427)||(42391097-42391179)
chr7 (343-427)||(43557528-43557613)
chr7 (343-424)||(47716515-47716596)
chr7 (155-223)||(1424017-1424085)
chr7 (158-230)||(12473267-12473339)
chr7 (348-427)||(32758320-32758397)
chr7 (154-210)||(40463836-40463892)
chr7 (348-423)||(3469176-3469251)
chr7 (343-425)||(21172008-21172088)
chr7 (158-260)||(28362214-28362316)
chr7 (171-260)||(16341254-16341344)
chr7 (155-221)||(22699079-22699145)
chr7 (343-420)||(33871914-33871989)
chr7 (348-425)||(35787268-35787343)
chr7 (377-427)||(36602535-36602585)
chr7 (343-424)||(48735122-48735201)
chr7 (344-427)||(38262193-38262274)
chr7 (343-424)||(45018923-45019006)
chr7 (361-424)||(2541019-2541082)
chr7 (158-221)||(13805066-13805128)
chr7 (351-394)||(39123957-39124000)
chr7 (343-424)||(10693073-10693152)
chr7 (343-424)||(22698967-22699049)
chr7 (343-424)||(23419674-23419753)
chr7 (361-427)||(34626205-34626271)
chr7 (343-423)||(11617589-11617667)
chr7 (343-396)||(33500569-33500622)
chr7 (155-228)||(34626309-34626382)
chr7 (366-422)||(18512455-18512511)
chr7 (155-223)||(28078238-28078306)
chr7 (159-203)||(29140487-29140531)
chr7 (361-425)||(31591108-31591172)
chr7 (366-422)||(35334818-35334874)
chr7 (361-425)||(40463948-40464012)
chr7 (155-223)||(42476833-42476901)
chr7 (343-426)||(42798725-42798806)
chr7 (172-238)||(6736867-6736934)
chr7 (160-210)||(19265781-19265830)
chr7 (373-427)||(25198810-25198864)
chr7 (171-230)||(29907393-29907454)
chr7 (350-423)||(29907482-29907552)
chr7 (177-223)||(42391205-42391251)
chr7 (158-203)||(3469306-3469350)
chr7 (366-423)||(18747564-18747621)
chr7 (343-427)||(19426887-19426968)
chr7 (361-426)||(23618975-23619040)
chr7 (361-426)||(27629706-27629771)
[»] chr3 (77 HSPs)
chr3 (155-260)||(8247758-8247864)
chr3 (155-260)||(29366791-29366897)
chr3 (155-260)||(40272881-40272987)
chr3 (155-260)||(46421106-46421212)
chr3 (155-230)||(10870051-10870126)
chr3 (343-425)||(13628789-13628871)
chr3 (155-260)||(13730673-13730779)
chr3 (343-429)||(40272807-40272891)
chr3 (155-230)||(52926310-52926385)
chr3 (344-426)||(5173717-5173799)
chr3 (343-424)||(45786214-45786295)
chr3 (343-427)||(46421031-46421116)
chr3 (155-230)||(5173820-5173896)
chr3 (155-223)||(7696992-7697060)
chr3 (343-426)||(54484769-54484850)
chr3 (155-230)||(1217072-1217147)
chr3 (155-260)||(13628861-13628968)
chr3 (348-427)||(13730599-13730678)
chr3 (155-260)||(16735423-16735528)
chr3 (343-425)||(29366719-29366801)
chr3 (343-424)||(10795423-10795504)
chr3 (343-428)||(49013469-49013554)
chr3 (158-230)||(35417902-35417973)
chr3 (343-422)||(353351-353430)
chr3 (359-426)||(516504-516571)
chr3 (155-230)||(9607185-9607260)
chr3 (158-260)||(26573113-26573215)
chr3 (162-229)||(26869696-26869763)
chr3 (155-260)||(4495733-4495839)
chr3 (348-425)||(12914034-12914109)
chr3 (155-260)||(12914104-12914210)
chr3 (343-396)||(45139505-45139557)
chr3 (343-427)||(52926216-52926298)
chr3 (348-427)||(8247683-8247763)
chr3 (155-223)||(22123022-22123090)
chr3 (158-257)||(34420716-34420815)
chr3 (289-344)||(9144810-9144865)
chr3 (343-429)||(15797298-15797382)
chr3 (343-425)||(25517169-25517249)
chr3 (155-230)||(39203498-39203573)
chr3 (343-426)||(53996563-53996645)
chr3 (155-260)||(22609749-22609853)
chr3 (361-427)||(24851298-24851364)
chr3 (153-203)||(25517300-25517350)
chr3 (343-424)||(14987035-14987116)
chr3 (343-423)||(22122918-22122996)
chr3 (343-423)||(22609843-22609921)
chr3 (343-427)||(26869784-26869866)
chr3 (348-424)||(39203597-39203671)
chr3 (343-426)||(1217166-1217247)
chr3 (369-425)||(10484615-10484671)
chr3 (343-426)||(34771362-34771443)
chr3 (158-230)||(45620929-45621000)
chr3 (289-344)||(50462708-50462768)
chr3 (155-251)||(12525392-12525486)
chr3 (348-427)||(25944552-25944630)
chr3 (366-425)||(30452894-30452953)
chr3 (376-427)||(47624208-47624259)
chr3 (382-428)||(4495672-4495718)
chr3 (155-260)||(6411891-6411996)
chr3 (343-424)||(31592925-31593004)
chr3 (184-260)||(516420-516497)
chr3 (292-344)||(29322821-29322878)
chr3 (158-230)||(45948938-45949012)
chr3 (171-228)||(53062036-53062093)
chr3 (184-260)||(54032628-54032705)
chr3 (348-428)||(829438-829517)
chr3 (383-427)||(40390357-40390401)
chr3 (343-414)||(45948848-45948917)
chr3 (343-413)||(6411833-6411901)
chr3 (343-425)||(16735518-16735598)
chr3 (175-230)||(30928247-30928302)
chr3 (158-260)||(53996635-53996737)
chr3 (382-425)||(54032570-54032613)
chr3 (353-427)||(12525493-12525567)
chr3 (343-429)||(54374340-54374425)
chr3 (366-427)||(26573226-26573287)
[»] chr6 (46 HSPs)
chr6 (340-425)||(12885964-12886049)
chr6 (343-426)||(29355853-29355936)
chr6 (159-260)||(12221986-12222088)
chr6 (155-223)||(1346924-1346992)
chr6 (155-230)||(1354855-1354930)
chr6 (155-260)||(8409203-8409309)
chr6 (155-223)||(3815184-3815252)
chr6 (343-425)||(12221913-12221996)
chr6 (147-230)||(14975180-14975263)
chr6 (149-230)||(24734587-24734668)
chr6 (351-427)||(12892071-12892147)
chr6 (163-230)||(2166512-2166579)
chr6 (163-230)||(2178145-2178212)
chr6 (155-260)||(29355926-29356033)
chr6 (349-427)||(3116126-3116204)
chr6 (156-261)||(13905047-13905152)
chr6 (343-427)||(1347018-1347100)
chr6 (348-428)||(2166406-2166486)
chr6 (348-428)||(2178039-2178119)
chr6 (366-426)||(6808472-6808532)
chr6 (343-427)||(9161178-9161262)
chr6 (155-238)||(12063427-12063511)
chr6 (343-425)||(1354756-1354836)
chr6 (155-230)||(9161083-9161158)
chr6 (155-230)||(15866137-15866212)
chr6 (149-258)||(20400621-20400731)
chr6 (348-424)||(383760-383834)
chr6 (361-426)||(13267797-13267862)
chr6 (155-260)||(1941815-1941921)
chr6 (164-230)||(6024202-6024268)
chr6 (361-427)||(18277190-18277256)
chr6 (368-426)||(26097237-26097295)
chr6 (343-423)||(2755422-2755503)
chr6 (289-328)||(2979117-2979156)
chr6 (158-260)||(7947441-7947543)
chr6 (289-328)||(21038323-21038362)
chr6 (366-425)||(23930126-23930185)
chr6 (361-428)||(24097649-24097716)
chr6 (371-426)||(25557805-25557860)
chr6 (155-210)||(33922948-33923003)
chr6 (165-223)||(8417442-8417500)
chr6 (366-424)||(10734905-10734963)
chr6 (350-420)||(14975094-14975164)
chr6 (159-205)||(19649292-19649338)
chr6 (259-296)||(2978549-2978586)
chr6 (160-221)||(14553477-14553537)
[»] scaffold0049 (2 HSPs)
scaffold0049 (343-424)||(59033-59114)
scaffold0049 (155-260)||(58937-59043)
[»] scaffold0258 (2 HSPs)
scaffold0258 (366-426)||(13022-13082)
scaffold0258 (155-230)||(13123-13198)
[»] scaffold0187 (6 HSPs)
scaffold0187 (155-230)||(10148-10223)
scaffold0187 (155-230)||(20476-20551)
scaffold0187 (343-422)||(10052-10129)
scaffold0187 (343-422)||(20380-20457)
scaffold0187 (155-210)||(8905-8960)
scaffold0187 (155-210)||(19233-19288)
[»] scaffold0168 (2 HSPs)
scaffold0168 (155-230)||(30539-30614)
scaffold0168 (343-426)||(30633-30714)
[»] scaffold0057 (5 HSPs)
scaffold0057 (348-427)||(46892-46969)
scaffold0057 (344-428)||(46703-46786)
scaffold0057 (155-210)||(24887-24942)
scaffold0057 (158-230)||(46794-46866)
scaffold0057 (361-427)||(24769-24835)
[»] scaffold0005 (1 HSPs)
scaffold0005 (155-230)||(226506-226581)
[»] scaffold0223 (2 HSPs)
scaffold0223 (156-230)||(11093-11166)
scaffold0223 (343-424)||(11185-11264)
[»] scaffold0024 (1 HSPs)
scaffold0024 (146-224)||(83826-83904)
[»] scaffold0254 (1 HSPs)
scaffold0254 (163-230)||(4125-4192)
[»] scaffold1176 (2 HSPs)
scaffold1176 (157-230)||(1685-1758)
scaffold1176 (343-420)||(1591-1666)
[»] scaffold0015 (1 HSPs)
scaffold0015 (343-425)||(48633-48713)
[»] scaffold0180 (1 HSPs)
scaffold0180 (343-427)||(24130-24212)
[»] scaffold0311 (2 HSPs)
scaffold0311 (158-210)||(10773-10825)
scaffold0311 (361-425)||(10882-10946)
[»] scaffold0116 (1 HSPs)
scaffold0116 (169-230)||(8865-8926)
[»] scaffold0194 (1 HSPs)
scaffold0194 (155-223)||(24624-24692)
[»] scaffold0031 (1 HSPs)
scaffold0031 (163-230)||(43097-43164)
[»] scaffold0018 (2 HSPs)
scaffold0018 (343-424)||(72867-72946)
scaffold0018 (157-190)||(73001-73034)
[»] scaffold0242 (1 HSPs)
scaffold0242 (292-344)||(4232-4289)


Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-107; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 547 - 894
Target Start/End: Original strand, 9462131 - 9462477
Alignment:
Q  547 atttcggtattcgacgatttatctatttaaacgtgcatctctcttctttaacaaactgccaaaatgatatttaactattgtacaaagtaattcagtttaa 646  Q
    ||||||||||| | | ||||| |||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||| ||||| || || |||||||    
T  9462131 atttcggtatttggcaatttagctatttaaacgtgcacatctcttctttaacaaacttccaatatgatatttaactattgaacaaatta-ttaagtttaa 9462229  T
Q  647 at-tcctattttcgtctaattatatgttggaaaaatatagatgtcacataagtttacaacaattagtggaaaactacac--tgaattagacatttcttct 743  Q
    |  |||| || | |||||||||||||| ||||||||| |||||  |||| || ||| ||   ||||| | |||||||||  |||| |  |||||||||||    
T  9462230 aagtcctgttgttgtctaattatatgtcggaaaaatagagatgatacatgagcttaaaa---ttagtagcaaactacacactgaagttcacatttcttct 9462326  T
Q  744 gaaatacaagaatcaccaactatcaaatacctgttttttatttcttctgtaactacaaagaaaatcaatacattgatcatatcaaaccaaatatgatgta 843  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9462327 gaaatacaagaatcaccaactatcaaatacctgttttttatttcttctgtaattacaaagaaaatcaatacattgatcatatcaaaccaaatatgatgta 9462426  T
Q  844 attaccaaaataattaatgactaaatatttaacctagaaaaggcttttgtt 894  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9462427 attaccaaaataattaatgactaaatatttaacctagaaaaggcttttgtt 9462477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 9462050 - 9462129
Alignment:
Q  8 gttatacaccacttcttccatgaaggcatgacactattaaacaagcgttcatttctagtccgccaaatagaccaaacaag 87  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9462050 gttatacaccacttcttccacgaaggcacgacactattaaacaagtgttcatttctaatccgccaaatagaccaaacaag 9462129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 20224944 - 20225019
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||||||||||    
T  20224944 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctctt 20225019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 48598998 - 48598923
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  48598998 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 48598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 5648219 - 5648324
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  5648219 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 5648317  T
Q  254 gtacaat 260  Q
    |||||||    
T  5648318 gtacaat 5648324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 6430800 - 6430695
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  6430800 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 6430702  T
Q  254 gtacaat 260  Q
    |||||||    
T  6430701 gtacaat 6430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 16408777 - 16408672
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 254  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||| || ||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcg 16408678  T
Q  255 tacaat 260  Q
    ||||||    
T  16408677 tacaat 16408672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 20639738 - 20639655
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  20639738 ctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 20639655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 153 - 260
Target Start/End: Original strand, 21646922 - 21647030
Alignment:
Q  153 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 251  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||| |||||| | ||||||   ||||||||||    
T  21646922 gataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggct 21647021  T
Q  252 acgtacaat 260  Q
     ||||||||    
T  21647022 gcgtacaat 21647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 30352661 - 30352577
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||||||| | |||||| ||||||| |||||||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttttt 30352577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 33836564 - 33836484
Alignment:
Q  347 atacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||| ||||||||||||||||    
T  33836564 atacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttttt 33836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 5306838 - 5306763
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  5306838 taaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 5306763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 17315473 - 17315398
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  17315473 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctctt 17315398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 23501848 - 23501927
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  23501848 tacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 23501927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 16911522 - 16911628
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  |||| |||||| |||||| | || ||| | |||||||||| |    
T  16911522 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgc 16911621  T
Q  254 gtacaat 260  Q
    |||||||    
T  16911622 gtacaat 16911628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 355 - 424
Target Start/End: Complemental strand, 44363199 - 44363130
Alignment:
Q  355 caccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||||||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  44363199 caccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 44363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 10660364 - 10660439
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||||||||    
T  10660364 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctctt 10660439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 10874509 - 10874584
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||  |||||  ||||||||||||||||||    
T  10874509 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctctt 10874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 14590797 - 14590872
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  |||| |||||| ||||||    
T  14590797 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctctt 14590872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 23501753 - 23501808
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  23501753 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttca 23501808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 47528703 - 47528628
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  47528703 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 47528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 30639340 - 30639445
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||| ||||||  |||||||||||  ||||| | |||||| | |||||||||| |    
T  30639340 taaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaa-cagggtaaggctgc 30639438  T
Q  254 gtacaat 260  Q
    |||||||    
T  30639439 gtacaat 30639445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 20225130 - 20225211
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||||    
T  20225130 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 11054321 - 11054253
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||| |||||    
T  11054321 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaaca 11054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 16408682 - 16408598
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| ||| |||| |||||||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  16408682 ctgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 16408598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 13256480 - 13256397
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||| |||||||||||||||||||  |||| || | |||| | |||||| ||||||||||||||||||||    
T  13256480 ctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgcccttttt 13256397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 37494811 - 37494886
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| ||||||||||||||||||  |||| | |||||||||||| ||||||  ||||||||||||||||||    
T  37494811 taaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctctt 37494886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 16911618 - 16911700
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||| ||| | |||||| |  ||||||||||||||||    
T  16911618 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttt 16911700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 421
Target Start/End: Original strand, 21647020 - 21647098
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccc 421  Q
    |||| ||||||| ||||| ||| ||||||||||||||||||||| || |||||| | |||||| |||||||||||||||    
T  21647020 ctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 38755966 - 38755908
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  38755966 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 16494273 - 16494326
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 396  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  16494273 ctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcg 16494326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 32484310 - 32484371
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  32484310 gtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 32484371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 487306 - 487235
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||| |||||||||||| ||||||| |||||||||||||||||||  || |||||||||||||||    
T  487306 ccttggcgtaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctctt 487235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 5313169 - 5313101
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||  ||||| |||||    
T  5313169 taaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaaca 5313101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 5648314 - 5648395
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||| | ||||| ||||||||||||||    
T  5648314 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgcccttttt 5648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 11394924 - 11394987
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| |||||||||||| || ||||||||||||||| | |||||| ||||||||||||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 11404651 - 11404714
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| |||||||||||| || ||||||||||||||| | |||||| ||||||||||||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 19027823 - 19027914
Alignment:
Q  170 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||| ||||||| ||| ||| |||||||||||||||||||  ||||||||||||| |||| | |||||| | |||||||||| ||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaat 19027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 25629110 - 25629186
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||||  | ||||||||||||||| |||||| | |||||| | |||||| ||||||||||||||||||||    
T  25629110 tacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgcccttttt 25629186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 30352766 - 30352691
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||| ||| | |||||||||||||||    ||||||||||| ||||||    
T  30352766 taaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctctt 30352691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 20225038 - 20225117
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||    
T  20225038 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 25388253 - 25388311
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  25388253 gtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 30690255 - 30690176
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||||||   | ||||||||||||||| ||||||||||||||| | |||||| |||||| || ||||||||    
T  30690255 ctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttt 30690176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 38786681 - 38786747
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 38786747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 40553991 - 40553937
Alignment:
Q  370 gaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  40553991 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40553937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 42164317 - 42164248
Alignment:
Q  160 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||| |||||| ||||| ||||||| |||||||||||||||||||  || |||||||||||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctctt 42164248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 44718644 - 44718702
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||||||||||||||||||| | ||||||   ||||||||||||||||    
T  44718644 gtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcccttt 44718702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 49268805 - 49268746
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggc----ccgggccggcccatttgacacctct 344  Q
    ||||||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  49268805 tggcccatttctatagtcgggcctctcgggctaggccgggccggcccatttgacacctct 49268746  T

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Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 423
Target Start/End: Complemental strand, 6430705 - 6430627
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||  | |||||||| |||||| ||||||||||||||| | ||||||  ||||||||||||||||    
T  6430705 ctgcgtacaatacaccaaa--tggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

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Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 9987913 - 9987831
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||||||||  | ||||||||||||||  |||| ||| |||||| | |||||||||||||||| |||| ||||||    
T  9987913 ctgcatacaatacaccaaa--tggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccgggctgccttttttt 9987831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 10660460 - 10660544
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 427  Q
    |||||||||||||||||| ||| ||| |||||||||| ||| |||||||||||| | ||||||| |||| |||||||||| |||||    
T  10660460 ctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggagctttaagtgcatcgggttgccccttttt 10660544  T

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Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 10874605 - 10874689
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 427  Q
    |||||||||||||||||| ||| ||| |||||||||| ||| |||||||||||| | ||||||| |||| |||||||||| |||||    
T  10874605 ctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggagctttaagtgcatcgggttgccccttttt 10874689  T

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Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 30639435 - 30639517
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||| ||||||||||| |||||||| |||||| | |||||| ||||| |||||||||||||||    
T  30639435 ctgcgtacaatacaccaaa--tggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttttt 30639517  T

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Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 35532077 - 35532130
Alignment:
Q  374 ccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 35532130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 20908716 - 20908633
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| | |||||||||||||||  |||||||||||||| | |||||| |||||  || |||||||||||    
T  20908716 ctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttttt 20908633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 29207977 - 29207900
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||    
T  29207977 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 36816464 - 36816381
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||||  ||||||| ||||||  ||||||| ||||||| | |||||| || ||||||||||||||||||    
T  36816464 ctgcgtacaatacaccaaaaag-gtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttttt 36816381  T

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Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 54175119 - 54175202
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggacccctt-cccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||| | |||||||||||| ||| |||||||| |||||| | |||||| ||||||||| ||||||||||    
T  54175119 ctgcgtacaatacaccaaaa-tggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgcccttttt 54175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 54640510 - 54640439
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||| ||||| ||| |||||||||||||||||||||||  || |||||||| ||||||    
T  54640510 ccttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctctt 54640439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 20405053 - 20405104
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacggg 206  Q
    |||||||| ||||||||||||||||||| ||||||| ||| |||||||||||    
T  20405053 taaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 361 - 428
Target Start/End: Original strand, 35567242 - 35567309
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| |||||||||||||||  ||||||||| |||| | |||||| ||||||||| ||||||||||||    
T  35567242 aaatggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttttta 35567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 43035224 - 43035283
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| ||| ||| |||||||||||||||||||  ||| ||||||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctctt 43035283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 51865117 - 51865037
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||| ||||||||| ||||||||||||||| | |||||| ||||||||  |||||||||    
T  51865117 ctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggactgccctttt 51865037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 25463111 - 25463157
Alignment:
Q  184 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  25463111 tcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 25463157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 32629436 - 32629368
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||   |||||| ||||||||||||||||||| ||||| |||||| ||||||    
T  32629436 ccttggcgcaac-ggtaaagttgt---catgtgactgaaaggtcacgggttcaaatcctcgaaacagcctctt 32629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 40915802 - 40915864
Alignment:
Q  168 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||| ||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctctt 40915864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 41018945 - 41018863
Alignment:
Q  178 ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacgtacaat 260  Q
    ||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||    ||||   |||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaat 41018863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 54966983 - 54967056
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||  |||||  | ||||||| ||||||||    
T  54966983 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctctt 54967056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 7909355 - 7909281
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgg-gctttaatgcaccgggttgccctt 423  Q
    ||||||||||||||  | |||||||||||||||  |||||||||||||| || |||||| |||| ||||||||||||    
T  7909355 tacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggagctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 11054227 - 11054145
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | | || |||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  11054227 ctgcgtacaatacaccaaa--tggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 11054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 28972588 - 28972531
Alignment:
Q  292 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 344  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  28972588 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 28972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 423
Target Start/End: Original strand, 40915884 - 40915962
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||  | |||||| |||||||| ||||||||||||||| | |||| | |||||||| ||||||||    
T  40915884 ctgcgtacaatacaccaaa--tggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccggattgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 47444013 - 47444095
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||  | |||| | ||||| |||||||||||||||    
T  47444013 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcaggagcttcagtgcactgggttgccctttttt 47444095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 47482918 - 47482849
Alignment:
Q  356 accaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | |||||  |||| || | |||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgccctttt 47482849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 47528609 - 47528527
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||  |||| | | ||| || |||||||||||||||||||||    
T  47528609 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttttt 47528527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 428
Target Start/End: Original strand, 54730314 - 54730391
Alignment:
Q  351 aatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||||||||| |||  ||| |||||||||| ||||||||||||||| | |||||| |||||||  || ||||||||||    
T  54730314 aatacaccaataatgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccgaattaccctttttta 54730391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 1763429 - 1763369
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 344  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  1763429 tggcccatttcaatagtcgggcctctcgggcccgagccgggccggcccatttgacacctct 1763369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 423
Target Start/End: Complemental strand, 8473701 - 8473621
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccaga--ccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||||||||||||||||||  | ||||||||||||||| |   |||||| |||||| | |||||| |||||||||||||||||    
T  8473701 ctgcatacaatacaccaaa--tggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 9832392 - 9832311
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||  |  || || ||||||||||||||||||||    
T  9832392 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgcccttttt 9832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 13256572 - 13256508
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctgga 219  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||  ||||||  |||||||    
T  13256572 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 14983906 - 14983970
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||| || |||  |||||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgccctttt 14983970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 20405148 - 20405224
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||||||||| || ||| ||||||||||||||| ||||| || |||||| | |||||| ||||  ||||||||||||    
T  20405148 tacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcattgggttgcccttt 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 41018868 - 41018807
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcac 411  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||   |||||||| |||||    
T  41018868 tacaatacaccaaa--tagtgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 44363294 - 44363234
Alignment:
Q  168 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||  ||||| ||||| ||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctc 44363234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 48598904 - 48598823
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| ||| |||||  | ||| || ||||||||||||||||||||    
T  48598904 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgcccttttt 48598823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 6377622 - 6377661
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccgg 328  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  6377622 tggcccatttctatagtcgggcctctcgggcccgagccgg 6377661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 18969701 - 18969736
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtg 190  Q
    |||||||||||||||||||||||||||| |||||||    
T  18969701 taaccttggcgcaactggtaaagttgttgtcatgtg 18969736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 28185587 - 28185626
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccgg 328  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  28185587 tggcccatttctatagtcgggcctctcgggcccgagccgg 28185626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 30496491 - 30496420
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||  ||||||||| ||| ||| ||||||||||||| |||||  || |||||||| ||||||    
T  30496491 cttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctctt 30496420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 54730209 - 54730284
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||| |||||||||  |||||||||||| ||||||| |  ||||||||||||||||  |||| |||||| ||||||    
T  54730209 taactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctctt 54730284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 55766641 - 55766590
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacggg 206  Q
    |||||||| ||||||||||||||||||| ||||||| | | |||||||||||    
T  55766641 taaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggg 55766590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 8473790 - 8473720
Alignment:
Q  160 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||||||| |||| || | | |||||  ||||||||  ||||||||||| ||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctctt 8473720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 8820585 - 8820615
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcg 396  Q
    |||||||||||||||||||||||||||||||    
T  8820585 gtgggaccccttcccagaccctgcgtatgcg 8820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 17043549 - 17043463
Alignment:
Q  175 aagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    |||||||| ||| ||| |||||||||||| ||||||  ||||||||||| |||||| | |||||  | |||||||||| ||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaat 17043463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 28494223 - 28494289
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| |||||||||||||||||| ||||| |||||| | ||| || ||||||||| |||| ||||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgccttttttt 28494289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 39077948 - 39077894
Alignment:
Q  176 agttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||| |||||||  ||||||||||||||||||  ||||||||||| ||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctctt 39077894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12257764 - 12257700
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||| |||||| |||||||||||| ||| |||  |||||||||||||||||| ||||| ||||||    
T  12257764 ccttgacgcaac-ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaaca 12257700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 17043473 - 17043423
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 395  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||| |||||    
T  17043473 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgcatatgc 17043423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 49938668 - 49938612
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggcttta 405  Q
    ||||||||||||||| | |||||||||||||||| ||||||| |||||| | ||||||    
T  49938668 tacaatacaccaaaa-tggtgggaccccttcccataccctgcatatgcgggagcttta 49938612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 49938759 - 49938690
Alignment:
Q  161 tggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| |  ||||||||| ||| ||| |||||||||||| ||||||  ||||||||||| ||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 49938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 50555714 - 50555653
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| |||||||||| ||||||||||||||  | | |||| ||||||||| |||||||||||    
T  50555714 gtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgccctttttt 50555653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 1e-31; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 14530278 - 14530384
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | ||||||||||||    
T  14530278 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctac 14530377  T
Q  254 gtacaat 260  Q
    |||||||    
T  14530378 gtacaat 14530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 12024093 - 12023988
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  12024093 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 12023995  T
Q  254 gtacaat 260  Q
    |||||||    
T  12023994 gtacaat 12023988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 10543754 - 10543835
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  10543754 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 8455491 - 8455385
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||  | |||||||||| |    
T  8455491 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgc 8455392  T
Q  254 gtacaat 260  Q
    |||||||    
T  8455391 gtacaat 8455385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 10543658 - 10543764
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||  ||||||||||  |||||| | |||||| | |||||||||| |    
T  10543658 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgc 10543757  T
Q  254 gtacaat 260  Q
    |||||||    
T  10543758 gtacaat 10543764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 14530379 - 14530455
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  14530379 tacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 11514396 - 11514471
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  11514396 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctctt 11514471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 24200800 - 24200694
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||  |||||||||||||||||| ||||||| |||||| ||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  24200800 taaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 24200701  T
Q  254 gtacaat 260  Q
    |||||||    
T  24200700 gtacaat 24200694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 10546219 - 10546301
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  10546219 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 10546301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 9671235 - 9671315
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  9671235 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 9671315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 17667973 - 17668068
Alignment:
Q  166 caactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| |||||||| | |||||| | |||||||||| ||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaat 17668068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 21779434 - 21779359
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||  ||||||| ||| ||||||    
T  21779434 taaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctctt 21779359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 23397726 - 23397801
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  23397726 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctctt 23397801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 23488544 - 23488619
Alignment:
Q  350 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||| |||||    
T  23488544 caatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctctttt 23488619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 25079893 - 25079818
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  || | |||||||||||||    
T  25079893 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctctt 25079818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 42808528 - 42808583
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 344  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42808528 tggcccatttctatattcgggcctctcgggcccgggccggcccatttgacacctct 42808583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 24200704 - 24200622
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||||| |||||| |||||||| ||||||| ||||| | | |||||| |||||||||||||||||||    
T  24200704 ctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 344 - 426
Target Start/End: Complemental strand, 31158519 - 31158437
Alignment:
Q  344 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| | |||| | ||| |||||||    
T  31158519 tgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtacacctgattgtccttttt 31158437  T

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Target: chr2; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 9671140 - 9671216
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggct-gaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| |||||||||||| ||||||| || |||| |||||||||||| |||||||||||| ||||||    
T  9671140 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctctt 9671216  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 8455395 - 8455315
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||    
T  8455395 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttt 8455315  T

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Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 17623535 - 17623630
Alignment:
Q  166 caactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||||||||||||| ||||| | ||| |||||||||||||||  |||| ||||||||||||| | |||||| | |||||||||| ||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaat 17623630  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 17896219 - 17896294
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||||||||||| ||||||| | |||||||||||| ||||  |||| |||||||||||||    
T  17896219 taaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctctt 17896294  T

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Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 14444800 - 14444866
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||| |||||| ||||||||||||||    
T  14444800 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttttt 14444866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 5450263 - 5450320
Alignment:
Q  173 taaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctctt 5450320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 22371017 - 22371090
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||  ||||||||||| ||||    
T  22371017 taaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc 22371090  T

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Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 25249817 - 25249735
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | |||||| ||||||||  |||||||||||||| | |||||| |||||||||||||||||||||    
T  25249817 ctgcgtacaatacaccaaa--tggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttttt 25249735  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 36871548 - 36871629
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| |||||||||| | |||||| |||||||||||||||||||||    
T  36871548 ctgcgtacaatacaccaaa--tggtgggaccccttcccggacc-tgcgtatgcgggagctttagtgcaccgggttgccctttttt 36871629  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 19977889 - 19977813
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctcttt 231  Q
    ||||||||||| ||||||| |||||||| ||||||| | |||||||||||||||||  | ||||||||| |||||||    
T  19977889 taaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttt 19977813  T

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Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 25249912 - 25249844
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||    
T  25249912 taaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaaca 25249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 44643595 - 44643659
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||||||||||||||||||| | || ||| ||||||||| |||||||||    
T  44643595 aaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttt 44643659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 11514492 - 11514571
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||| ||||||||||||||||||||| | |||||| |||||||| ||||||||||    
T  11514492 ctgcgtacaatacaccaaa--tggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttt 11514571  T

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Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 17705455 - 17705522
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 222  Q
    ||||||||| |||||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||    
T  17705455 taaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaac 17705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 27573581 - 27573628
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtca 202  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 27573628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 34766332 - 34766395
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 429  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||| |||||| |||||||||||    
T  34766332 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggtttcccttttttat 34766395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 40417031 - 40416940
Alignment:
Q  170 tggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||||||||| |||||||| | ||| ||||||  |||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaat 40416940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 7214494 - 7214600
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||| ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||  || ||||||||  ||||| | |||||  | |||||||||| |    
T  7214494 taactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgc 7214593  T
Q  254 gtacaat 260  Q
    |||||||    
T  7214594 gtacaat 7214600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 21779335 - 21779260
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  21779335 tacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 25079775 - 25079717
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  25079775 gtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 5841089 - 5841166
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||| ||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||| |||||||||||    
T  5841089 tacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttt 5841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 39914475 - 39914406
Alignment:
Q  161 tggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||| |||||||||||||| ||||||| ||| ||||||||||| |||  | ||||||||||||||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctctt 39914406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 40579807 - 40579750
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    ||||||||||||||| ||||||| ||||||| | |||||| |||||||||||||||||    
T  40579807 gtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 44521544 - 44521473
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||| |||||||||||||||| ||| ||||||||||||| ||||| ||| ||||||||| |||||    
T  44521544 ccttggcggaac-ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctctt 44521473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 14544023 - 14544098
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||| || ||| ||  | ||||||||| ||||||    
T  14544023 taaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctctt 14544098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 34080178 - 34080237
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||| |||||||| |||||| | | |||| |||||||||||||||||||    
T  34080178 gtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttt 34080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 44604826 - 44604889
Alignment:
Q  167 aactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||  ||||||||||||||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctctt 44604889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 24860157 - 24860087
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 229  Q
    |||||||||||||||||| ||||| ||||||| ||| ||||| ||||||| |   ||||||||||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctct 24860087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 19614981 - 19615058
Alignment:
Q  184 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||| |||||||||||||||||||  |||| |||||| |||||| |||||||| | ||||||| || ||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaat 19615058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 22371199 - 22371248
Alignment:
Q  376 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 22371248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 26684683 - 26684618
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| |||||||| ||||||  |||||||||||||| | ||||||||||||||| ||| |||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccggattgtccttttt 26684618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 26827039 - 26826982
Alignment:
Q  292 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 344  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  26827039 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 26826982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 32781461 - 32781357
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 254  Q
    ||||||||||||| |||||||||||||   |||| |||||||||||||| |||||  ||  |||||||||||||| | |||||| | ||||||| || ||    
T  32781461 aaccttggcgcaa-tggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcg 32781363  T
Q  255 tacaat 260  Q
    ||||||    
T  32781362 tacaat 32781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 33795261 - 33795350
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaa 259  Q
    |||||||||||| ||| |||  ||||||||||||||||||  ||| ||||||||||||||   |||||| | |||||||||| |||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaa 33795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 40762308 - 40762234
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||  | ||||||||| ||||  ||||||||||||| | | |||||| ||||||||||||||||||    
T  40762308 tacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 41409939 - 41410000
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| |||||||| |||||| | |||| | |||||||||||||||| ||||    
T  41409939 gtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccctctttt 41410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 44089183 - 44089236
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacct 342  Q
    |||||||||| |||||| |||||||||||| ||||||| | |||||||||||||    
T  44089183 tggcccatttatatagtcgggcctctcggggccgggccaggccatttgacacct 44089236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 44449463 - 44449395
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcacc 412  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||| || | | | |||||||||||    
T  44449463 ctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctgcgtttgtgggagttttaatgcacc 44449395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 99434 - 99363
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| | |||||||||| ||| ||| |||||||||||||||||||  |||| |||||| ||||||    
T  99434 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 99363  T

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Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 5840988 - 5841056
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||||| |||| || |||||||||| ||||||| ||| |||||||||||||||  |||| ||||||    
T  5840988 taaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaaca 5841056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 10546153 - 10546229
Alignment:
Q  186 atgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tat-aaaaagcggggtaaggctacgtacaat 260  Q
    ||||| |||||||||||||||||||  ||||||||||| |||||| ||| ||||| | |||||||||| ||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaat 10546229  T

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Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 17380407 - 17380336
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||| |||  |||||||| ||||||| | |||||||||||||||||  || |||||||||||||||    
T  17380407 ccttggcgcaa-tggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctctt 17380336  T

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Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 39189596 - 39189556
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctga 195  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  39189596 taaccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 44643486 - 44643537
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||| |||||    
T  44643486 ccttggcgcaa-tggtaaagttgtcatcatgtgactgaaaggtcacgtgttca 44643537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 8575975 - 8576030
Alignment:
Q  369 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||||||||||| ||||||||||||| | | |||||| |||||| |||||||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgcccttt 8576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 27466305 - 27466262
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaag 198  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||    
T  27466305 taacattggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 29420048 - 29419989
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||  || ||||||||||||| |||||  ||||||||||||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctctt 29419989  T

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Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 190
Target Start/End: Complemental strand, 39499385 - 39499354
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtg 190  Q
    ||||||||||||||||||||||||||||||||    
T  39499385 cttggcgcaactggtaaagttgttatcatgtg 39499354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 39914363 - 39914305
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||  ||||||||||||||| | |||||| |||| ||||||||||||||    
T  39914363 gtgggaccccttcct-gaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 39914305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 428
Target Start/End: Original strand, 17668058 - 17668141
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||||  | |||| |||||||| |  |||||||||||  | | |||||| ||||||||||||||||||||||    
T  17668058 ctgcgtacaatacaccaaa--tggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttttta 17668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 32781367 - 32781316
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 396  Q
    |||| ||||||||||||||  | ||||||||||||||||||||||| |||||||    
T  32781367 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcg 32781316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 34752820 - 34752762
Alignment:
Q  172 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||| ||||||||||||| |||||||||||||  ||||  | ||||||||||||||||    
T  34752820 gtaaacttgttatcatgtgactgaaaggtcacgaattcaagttctggaaacaacctctt 34752762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 14544136 - 14544201
Alignment:
Q  359 aaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||||| || |||||||||||  ||||||||||||||| | |||||| ||||||  ||||||||||    
T  14544136 aaaaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 17896332 - 17896397
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||| | ||||||||||||| | | |||||| |||| || ||||||||||||    
T  17896332 aaatggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgcccttttt 17896397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 23397825 - 23397899
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||  | ||||||||||||| | |||||| | |||||| | ||| || ||||||||||||||||||    
T  23397825 tacaatacaccaaa--tggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 24860067 - 24859985
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | || | |||||||| | ||||||||||||||| | |||||| |||||||| ||||| ||||||    
T  24860067 ctgcgtacaatacaccaaa--tggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccggattgccttttttt 24859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 24890467 - 24890517
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 395  Q
    ||||||||||||||||||   | ||||||||||||||| ||||||||||||||    
T  24890467 ctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgc 24890517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 38879541 - 38879647
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | |||||||||| |    
T  38879541 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgc 38879640  T
Q  254 gtacaat 260  Q
    |||||||    
T  38879641 gtacaat 38879647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 1565391 - 1565466
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||    
T  1565391 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctctt 1565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 4619281 - 4619175
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| | |||||| | |||||| | |||||||||| |    
T  4619281 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgc 4619182  T
Q  254 gtacaat 260  Q
    |||||||    
T  4619181 gtacaat 4619175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 38879637 - 38879719
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  38879637 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 38879719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 41014279 - 41014384
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  41014279 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 41014377  T
Q  254 gtacaat 260  Q
    |||||||    
T  41014378 gtacaat 41014384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 43334162 - 43334235
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||    
T  43334162 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 43334235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 35710273 - 35710348
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  35710273 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctctt 35710348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 37024729 - 37024654
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  37024729 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 37024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 43334259 - 43334341
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||| | |||||| ||||||||||||||||||||    
T  43334259 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgcccttttt 43334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 24448850 - 24448956
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||| || | ||||||   |||||||||| |    
T  24448850 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgc 24448949  T
Q  254 gtacaat 260  Q
    |||||||    
T  24448950 gtacaat 24448956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 8170157 - 8170053
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacg 254  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||| ||| |  ||| | |||||||||| ||    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcct-tttgtgtaaaacagggtaaggctgcg 8170059  T
Q  255 tacaat 260  Q
    ||||||    
T  8170058 tacaat 8170053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 346 - 423
Target Start/End: Complemental strand, 12006406 - 12006329
Alignment:
Q  346 catacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||| | |||||| ||||||| |||||||||    
T  12006406 catacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 23974741 - 23974815
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||  ||||||||||||||||||    
T  23974741 taaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctctt 23974815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 4619185 - 4619103
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| |||||||||||||||||||    
T  4619185 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttt 4619103  T

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Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 16957375 - 16957450
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  16957375 tacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 16957450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 27328712 - 27328818
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||| ||||| ||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||  ||||| | |||||| | |||||||||| |    
T  27328712 taaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgc 27328811  T
Q  254 gtacaat 260  Q
    |||||||    
T  27328812 gtacaat 27328818  T

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Target: chr5; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 13801848 - 13801767
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||||    
T  13801848 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgcccttt 13801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 24448946 - 24449028
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||||    
T  24448946 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttttt 24449028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 424
Target Start/End: Original strand, 25622524 - 25622595
Alignment:
Q  353 tacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||||||| |||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgcccttt 25622595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 27328808 - 27328890
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| |||||||||||||||  |||||||||||||| | ||||||||||| ||| ||||| ||||    
T  27328808 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagctttaatgcatcggattgccttttt 27328890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 22600414 - 22600483
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaa 224  Q
    |||||||| || |||||||||||||||||||||||| ||| ||||| |||||||||  ||||||||||||    
T  22600414 taaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaa 22600483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 32703478 - 32703558
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  32703478 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 39801593 - 39801652
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||||||||||||||||||||| |||||||| | |||||| |||||||||||||| ||||    
T  39801593 gtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccatttt 39801652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 16028682 - 16028621
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  16028682 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 16028621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 8170063 - 8169982
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | | || | ||||||||||||||||||||    
T  8170063 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgcccttttt 8169982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 423
Target Start/End: Original strand, 20135660 - 20135740
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||  | |||| | |||||||||||||||||    
T  20135660 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 39301087 - 39301158
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||||||||||  || ||| |||||||||||    
T  39301087 ccttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctctt 39301158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 22187245 - 22187320
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||| ||||||||||| ||||||||||| |||| || |||||||||||| |||| |  ||||||||||| ||||||    
T  22187245 taactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctctt 22187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 22861841 - 22861786
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||| |||||| |||||||||| ||||||| |||||||||||||| ||||    
T  22861841 taaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattca 22861786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 28516593 - 28516534
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| ||| |||||||||||||||||||||||  || |||||||| ||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctctt 28516534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 41014374 - 41014454
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||  ||||| || |||||| | |||||| |||||||||||||||||||    
T  41014374 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 41014454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 29334451 - 29334532
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| |||||||||||| || | ||||||||| ||||| ||||||||||||| | |  ||||||||||||||| |||||||||    
T  29334451 ctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgccctttt 29334532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 34154893 - 34154814
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| ||||||   ||| || ||||||||||||||||||    
T  34154893 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 10306548 - 10306493
Alignment:
Q  349 acaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggcttta 405  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||| | ||||||    
T  10306548 acaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 12575735 - 12575660
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||| | ||||||||||||||  ||||||||||||||  | |||||  ||||||||| ||||||||    
T  12575735 tacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttt 12575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 32354211 - 32354263
Alignment:
Q  373 cccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||||||| ||||||| ||||||| | |||||| |||||||||||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 32354263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 39079937 - 39079886
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||||| |||||||||||| ||||||| | |||||||||||||||||    
T  39079937 ccttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttca 39079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 12006500 - 12006430
Alignment:
Q  160 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac-gggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| | |||||||| ||||||| |||||||||||| ||||||| |  ||||||||||||||||    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttca-agtctggaaacaacctctt 12006430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 31299592 - 31299667
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| |||||||||||||||||| ||||||| || | |||||||  |||||  |||| |||||| ||||||    
T  31299592 taaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctctt 31299667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 2838738 - 2838788
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctg-aaaggtcacg 204  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||||||||    
T  2838738 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacg 2838788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 10634317 - 10634248
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||||||||| ||| |||||||| ||| ||| ||||||||||| |||||||  |||| |||||||||||    
T  10634317 ccttggcgcaac-ggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctc 10634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 429
Target Start/End: Complemental strand, 11657779 - 11657694
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 429  Q
    |||||||||||||||| ||||| |||||||||||||||  |||||||  | ||| |  ||||| | ||||||| |||||||||||||    
T  11657779 ctgcatacaatacacc-aaaatggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgcccttttttat 11657694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 16880726 - 16880647
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||| |||| |||||| |||| |||||||||| | |||||| ||||||||||| ||||||    
T  16880726 ctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccgggtttcccttt 16880647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 19438709 - 19438759
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgg 205  Q
    |||||||||||||||||||||||||||| |||| || || |||| ||||||    
T  19438709 taaccttggcgcaactggtaaagttgttgtcatatgactaaaagatcacgg 19438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 28516513 - 28516432
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||| ||||| | ||||||||| ||||||||||||||| ||||  | |||||| || ||| ||||||||||||    
T  28516513 ctgcgtacaatacatcaaaa-tggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggttgccctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 30877622 - 30877564
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||| |||||||| |||| | | ||| || ||||||||||||||||||    
T  30877622 gtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 32703413 - 32703459
Alignment:
Q  184 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  32703413 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 32703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 35710383 - 35710449
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| || | ||| |||||| | ||| || |||||||||||||||||||||    
T  35710383 aaatggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttttt 35710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 43574678 - 43574732
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccggg 415  Q
    |||| ||||||||||||||| ||||||||||||||| | ||||||  ||||||||    
T  43574678 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccggg 43574732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 1405170 - 1405231
Alignment:
Q  178 ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    ||||| ||||||| ||  |||||||||||||||  |||||||||||||||||| ||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaa 1405231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 421
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  360 aaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccc 421  Q
    ||||| |||||||||||| || ||||||||||||||| | | |||| ||||||| |||||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 22187341 - 22187422
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| |||||||||||||||| | || |||||||||||| ||||| | |||||  | |||||| |||| | |||||||||||    
T  22187341 ctgcgtacaatacaccaaaaacaatgagaccccttcccaaaccctacatatgcaggagctttagtgcatcaggttgcccttt 22187422  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 30006285 - 30006382
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 251  Q
    |||| |||||||||||| |||| ||||| ||||||| |||||||||||  | ||||  ||| | |||||||||||| |||||| | | ||||||||||    
T  30006285 taacattggcgcaactgataaatttgttgtcatgtgactgaaaggtcatagattcaagtccggaaaacaacctcttatataaacaacagggtaaggct 30006382  T

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Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 34375172 - 34375205
Alignment:
Q  292 cccatttctatagttgggcctctcgggcccgggc 325  Q
    |||||||||||||| |||||||||||||||||||    
T  34375172 cccatttctatagtcgggcctctcgggcccgggc 34375205  T

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Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 35540634 - 35540667
Alignment:
Q  292 cccatttctatagttgggcctctcgggcccgggc 325  Q
    |||||||||||||| |||||||||||||||||||    
T  35540634 cccatttctatagtcgggcctctcgggcccgggc 35540667  T

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Target: chr1 (Bit Score: 63; Significance: 6e-27; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 35005202 - 35005284
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  35005202 ctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgccctttt 35005284  T

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Target: chr1; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 18742038 - 18741955
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  18742038 ctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttcccttttt 18741955  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 34725271 - 34725196
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  34725271 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 34725196  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 18944626 - 18944732
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||   |||||||||| |||||| | |||||| | |||||||||| |    
T  18944626 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 18944725  T
Q  254 gtacaat 260  Q
    |||||||    
T  18944726 gtacaat 18944732  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 30395903 - 30395797
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 30395804  T
Q  254 gtacaat 260  Q
    |||||||    
T  30395803 gtacaat 30395797  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 32632731 - 32632626
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  32632731 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 32632633  T
Q  254 gtacaat 260  Q
    |||||||    
T  32632632 gtacaat 32632626  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 46991787 - 46991893
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  |||||||||||||||||| | |||||| | ||||||||||      
T  46991787 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgt 46991886  T
Q  254 gtacaat 260  Q
    |||||||    
T  46991887 gtacaat 46991893  T

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Target: chr1; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 50606487 - 50606564
Alignment:
Q  350 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 50606564  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 20004171 - 20004089
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| || |||||| | |||||| |||||||||||||||||||    
T  20004171 ctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 20004089  T

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Target: chr1; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 45402174 - 45402257
Alignment:
Q  342 tctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||    
T  45402174 tctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccgggttgcccgttttt 45402257  T

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Target: chr1; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 10668309 - 10668386
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||| ||| ||||||||||||||| | ||||||||||||| | |||||| |||||||||||||||||||    
T  10668309 tacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10668386  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 18944722 - 18944807
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggc-tttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | || |||| |||||||||||||||||||||    
T  18944722 ctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttttt 18944807  T

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Target: chr1; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 428
Target Start/End: Original strand, 27201726 - 27201811
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| |||||||||| | |||||| ||||  ||||||||||||||||    
T  27201726 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgcattgggttgccctttttta 27201811  T

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Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 22930242 - 22930174
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |||||||||||    
T  22930242 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 22930174  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 47214494 - 47214562
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  47214494 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

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Target: chr1; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 14617021 - 14617096
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||| ||||||    
T  14617021 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctctt 14617096  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 4349717 - 4349796
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  4349717 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

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Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 18724715 - 18724614
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 257  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||  ||||    
T  18724715 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtac 18724617  T
Q  258 aat 260  Q
    |||    
T  18724616 aat 18724614  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 20004267 - 20004193
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 229  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||    
T  20004267 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctct 20004193  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 42304283 - 42304205
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||| | | |||||| |||||||| |||||||||||    
T  42304283 tacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgcccttttt 42304205  T

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Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 46248032 - 46247949
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| || |||||||||||||||||||    
T  46248032 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttttta 46247949  T

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Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 46248128 - 46248022
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||  || |||||||| |||||| | |||||| | ||||||| || |    
T  46248128 taaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgc 46248029  T
Q  254 gtacaat 260  Q
    |||||||    
T  46248028 gtacaat 46248022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 43768239 - 43768300
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  43768239 gtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttttt 43768300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 9939443 - 9939519
Alignment:
Q  155 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| |||||| |||||| ||||||| ||||||||||||| |||||  ||||||||||||||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctctt 9939519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 19932925 - 19932824
Alignment:
Q  157 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctttataaaaagcggggtaaggctacgta 256  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |  |||| ||||||| | | |||||| | |||||||||| ||||    
T  19932925 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacctttgtgtaaaaaacagggtaaggctgcgta 19932828  T
Q  257 caat 260  Q
    ||||    
T  19932827 caat 19932824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 34714606 - 34714674
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||  || ||||||||    
T  34714606 taaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 18742136 - 18742081
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  18742136 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttca 18742081  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 20036208 - 20036278
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||  |||||||||||| |||||    
T  20036208 cttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactctt 20036278  T

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Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 38478455 - 38478380
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||  |||| |||||| ||||||    
T  38478455 taaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 38478380  T

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Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 40424725 - 40424780
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  40424725 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttca 40424780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 22327086 - 22327179
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 251  Q
    |||||||||||| || ||||||||| ||||||| |||||||||| ||||||||  |||||||||||||||||| | |||||| | ||||||||||    
T  22327086 ccttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 23768495 - 23768389
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||| | ||||||||||||||||||| ||||||| ||| |||||||| ||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  23768495 taacctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgc 23768396  T
Q  254 gtacaat 260  Q
    |||||||    
T  23768395 gtacaat 23768389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 30395807 - 30395725
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||| |||||||||||    
T  30395807 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttt 30395725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 41319981 - 41319875
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||| | ||||||||||||||||| ||||||| |||||||||||| |||| |  |||||||||||  ||||| | |||||| | |||||||||| |    
T  41319981 taaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgc 41319882  T
Q  254 gtacaat 260  Q
    |||||||    
T  41319881 gtacaat 41319875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 1517369 - 1517308
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||| ||||||||||||||||  | |||||| |||||||||||||||||||||    
T  1517369 gtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttttt 1517308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 45812616 - 45812534
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||||||||  | |||||||||||||||| ||||||| |||||| | ||| || |||||||||||||| ||||||    
T  45812616 ctgcatacaatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccgggttgccttttttt 45812534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 8197026 - 8197130
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||  |||||| ||   |||||| | |||||| |  |||||||||||    
T  8197026 taaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctac 8197125  T
Q  254 gtaca 258  Q
    |||||    
T  8197126 gtaca 8197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 9939547 - 9939623
Alignment:
Q  350 caatacaccaaaaatagtgggacccc-ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||| |||||||||| ||| | ||||||||||||||| | |||||| ||||||||||| |||||||    
T  9939547 caatacaccaaaaatggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttaccctttt 9939623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 10668203 - 10668283
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatc-----atgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||     ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10668203 taaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10668283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 19932834 - 19932782
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 395  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19932834 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgc 19932782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 25290146 - 25290214
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||  || ||||||||    
T  25290146 taaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 45812710 - 45812642
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||  ||||| |||||    
T  45812710 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 45812642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 4447794 - 4447849
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 344  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  4447794 tggcccatttctatagtcgggcctcttaggcccgagccggcccatttgacacctct 4447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 27201630 - 27201705
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||| ||| || ||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  27201630 taaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctctt 27201705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 27474380 - 27474439
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||||||| ||||||||||    
T  27474380 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttt 27474439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 45402078 - 45402152
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| |||||| | || ||||| |||||||||  ||||||||||| ||||||    
T  45402078 taaccttggcgcaactggtaaagttgttgtcatgt-gatggaaggtaacgggttcaagtcctggaaacagcctctt 45402152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 2435958 - 2435889
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||| ||||    
T  2435958 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 2435889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 2436064 - 2435995
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||| ||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||    
T  2436064 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctc 2435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 46991904 - 46991966
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||||||| ||||||||||||| | | |||||| ||||||||||||||| ||||||    
T  46991904 gtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccgggttgcccattttta 46991966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 25468421 - 25468332
Alignment:
Q  172 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||||||| |||||||  |||||||||| |||||||  |||||||||||||||||| | |||||| | |||||||| | ||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaat 25468332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 31382293 - 31382211
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||  |||||||| |||||| | |||||| || ||||||||||||||||||    
T  31382293 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagctttactgtaccgggttgccctttttt 31382211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 35019309 - 35019390
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||||||   | ||||||||||| ||||||||||||||||||| | |||||| ||||||||| |||| ||||||    
T  35019309 ctgcatacaatacaccaat--tggtgggacccct-cccagaccctgcgtatgcgagagctttagtgcaccgggctgccatttttt 35019390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 23796549 - 23796626
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||  | ||| |||||||||||||||||||| |||||  | |||||| ||||||||| |||||||||||    
T  23796549 tacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgccctttttt 23796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 27474264 - 27474332
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||| || ||||||||||||||||| ||||||| |||||||||||| ||||||  || ||||||||    
T  27474264 taaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaaca 27474332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 34725161 - 34725097
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  34725161 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 34725097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 35253266 - 35253185
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||| |||||||||||    
T  35253266 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgcccttttt 35253185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 19414422 - 19414477
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    ||||||||||| || ||||||||||||| |||| || |||||||||||||||||||    
T  19414422 taaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttca 19414477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 19414516 - 19414596
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | |||||||||||||||  ||||||| |||||| | ||| || |||||||||||||||||||    
T  19414516 ctgcgtacaatacaccaaa--tggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttt 19414596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 19701654 - 19701732
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| | ||||| ||||||||| ||||||||||||||| | |||||| |||||| || | |||||||||    
T  19701654 tacaatacaccaaaa-tggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccctttttt 19701732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 343 - 422
Target Start/End: Original strand, 22324971 - 22325049
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||||||||||||||||||||| ||||  |||| |||| ||||||||||||||| | |||||| |||||| || ||||||    
T  22324971 ctgcatacaatacaccaaaaatggtggagccccgtccc-gaccctgcgtatgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 33222971 - 33223042
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| || |  || |||||||| ||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctctt 33223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 33594189 - 33594130
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||| ||| | |||||||    
T  33594189 gtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccctttt 33594130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 6925096 - 6925158
Alignment:
Q  168 actggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||| | ||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctctt 6925158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 6983980 - 6983911
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    ||||||||||| ||||||||||||| ||| ||| |||||||||||| ||||||  ||||||||||| ||||    
T  6983980 ccttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc 6983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 12127015 - 12126957
Alignment:
Q  150 agagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggtt 208  Q
    |||| |||||||||||||||| ||||||||||| ||||||   ||||||||||||||||    
T  12127015 agagttaaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtt 12126957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 14617122 - 14617197
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||  | |||||| |||||||| |||||||| |||||| | |||||| ||||||||||| |||||||    
T  14617122 tacaatacaccaaa--tggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggttaccctttt 14617197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Original strand, 30555210 - 30555276
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| | ||||||||||||||| | |||||| ||||||||| || ||||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgacctttttt 30555276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 38478361 - 38478278
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||||  | |||| |||||||| | |||||||| |||||| | ||| || ||||||||||||||||||||||    
T  38478361 ctgcgtacaatacaccaaa--tggtggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttttta 38478278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 4430197 - 4430148
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggtt 208  Q
    ||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  4430197 cttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtt 4430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 6925200 - 6925261
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| | ||||||||||||| | |||||| ||||||| |||||| ||||||    
T  6925200 gtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttttt 6925261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 419
Target Start/End: Complemental strand, 23768399 - 23768325
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgc 419  Q
    |||| ||||||||||||||  | ||||||| ||||||||||||||||||||||| | |||||| |||| ||| ||||    
T  23768399 ctgcgtacaatacaccaaa--tggtgggacaccttcccagaccctgcgtatgcgggagctttagtgcagcggattgc 23768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 35117842 - 35117765
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgt-atgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||||||||||||||||  |||||||||||||| |||||||||| ||||  | |||||| ||||||||| | ||||||    
T  35117842 tacaatacaccaaaaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgggcttcccttt 35117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 48814166 - 48814129
Alignment:
Q  307 gggcctctcgggcccgggccggcccatttgacacctct 344  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  48814166 gggcctcgcgggcccgggccggcccatttgacacctct 48814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 50811926 - 50811990
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||| |||||||||||| ||| ||| ||||||||||||||  |||| |||||||||||    
T  50811926 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaaca 50811990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 6358200 - 6358251
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 395  Q
    |||| ||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  6358200 ctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatgc 6358251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 47214593 - 47214670
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||  | |||||||||||||||||||||||| |||||| | ||| || |||||| | || |||||||||    
T  47214593 tacaatacaccaaa--tggtgggaccccttcccagaccctgcatatgcgggagctctagtgcaccagattaccctttttt 47214670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 52910204 - 52910275
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||  || |||||||| ||||||    
T  52910204 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctctt 52910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 11596501 - 11596571
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||| |||||||| | | ||||||| |||||| ||||||||||||  |||| |||||||||||||    
T  11596501 cttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctctt 11596571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 12126916 - 12126836
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||| | |||||||||||    
T  12126916 ctgcgtacaatacaccaaa--ttgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 422
Target Start/End: Complemental strand, 15511224 - 15511150
Alignment:
Q  347 atacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||||||||||||||| | |||| |||||||||  ||||||||||||| | | |||||| ||||||||| ||||||    
T  15511224 atacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgtgtgagctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 17470517 - 17470415
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 256  Q
    |||||| ||||| |||||||||||| ||| ||| ||||| ||||| |||||||  |||| |||||| |||||| | |||||| | |||||||||| ||||    
T  17470517 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 17470419  T
Q  257 caat 260  Q
    ||||    
T  17470418 caat 17470415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 32632636 - 32632556
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | |||||||||||||||| ||||||| |||||| | |||| | |||||| |||| |||||||    
T  32632636 ctgcgtacaatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcaccaggtttccctttt 32632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 35117927 - 35117868
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| ||| ||| |||||||||||||||||||  ||||||||| | ||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctctt 35117868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 426
Target Start/End: Complemental strand, 50760281 - 50760238
Alignment:
Q  383 accctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||||||||||| | |||||||||||||||| ||||||||||    
T  50760281 accctgcgtatgcgggagctttaatgcaccgggctgcccttttt 50760238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 4587626 - 4587568
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgc 419  Q
    |||| ||||||||||||||| |||||||| |||||| | |||| | |||||||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccgggttgc 4587568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 45264472 - 45264411
Alignment:
Q  350 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcacc 412  Q
    ||||||||||||| | ||||||||||||| |||||||||| |||||| | |||||| ||||||    
T  45264472 caatacaccaaaa-tggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 50812024 - 50812100
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||||| | |||| ||||||||||   ||||||||||||| | |||||||||||| ||| ||||||||||    
T  50812024 tacaatacaccaaaa-tggtgg-accccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgcccttttt 50812100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 15511322 - 15511278
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 203  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  15511322 ccttggcgcaa-tggtaaagttgttgtaatgtggctgaaaggtcac 15511278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 16120819 - 16120876
Alignment:
Q  369 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||||||||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgcccttttt 16120876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 20270630 - 20270593
Alignment:
Q  307 gggcctctcgggcccgggccggcccatttgacacctct 344  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  20270630 gggcctctcgggctcgggccagcccatttgacacctct 20270593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 35019217 - 35019297
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    |||||||||||| |||||||||||| |||  || |||||||||||| | ||||  ||||| |||||||||||| ||||||||    
T  35019217 ccttggcgcaac-ggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaa 35019297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 44485280 - 44485213
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcata-tcctggaaacaacc 226  Q
    |||||||||||| | |||||||||| |||||||  |||||||||||||||| ||| ||||||||||||||    
T  44485280 ccttggcgcaacag-taaagttgttgtcatgtgattgaaaggtcacgggtt-atagtcctggaaacaacc 44485213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 2e-24; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 7136704 - 7136598
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  7136704 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgc 7136605  T
Q  254 gtacaat 260  Q
    |||||||    
T  7136604 gtacaat 7136598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 20869673 - 20869596
Alignment:
Q  153 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  20869673 gataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 20869596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 12670423 - 12670348
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  12670423 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 12670348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 30454270 - 30454195
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  30454270 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 30454195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 28817801 - 28817695
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  28817801 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 28817702  T
Q  254 gtacaat 260  Q
    |||||||    
T  28817701 gtacaat 28817695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 36720756 - 36720862
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  36720756 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 36720855  T
Q  254 gtacaat 260  Q
    |||||||    
T  36720856 gtacaat 36720862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 39461171 - 39461065
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||| |||||| | |||||| | | |||||||| |    
T  39461171 taaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgc 39461072  T
Q  254 gtacaat 260  Q
    |||||||    
T  39461071 gtacaat 39461065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 29521860 - 29521754
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||||||||||| |||||||||| || |||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  29521860 taaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgc 29521761  T
Q  254 gtacaat 260  Q
    |||||||    
T  29521760 gtacaat 29521754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 39461075 - 39460993
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  39461075 ctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 39460993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 44530109 - 44530215
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||| | ||||||| ||  |||||||||||||||  || ||||||||||||||| | |||||| | |||||||||| |    
T  44530109 taaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgc 44530208  T
Q  254 gtacaat 260  Q
    |||||||    
T  44530209 gtacaat 44530215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 20284248 - 20284164
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  20284248 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 20284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 21070877 - 21070793
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  21070877 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 21070793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 28407379 - 28407451
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 28407451  T

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Target: chr8; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 2626479 - 2626554
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  2626479 taaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 2626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 12625946 - 12626026
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||||||||||||||||||  | |||||||||| |||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  12625946 ctgcatacaatacaccaaa--tggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 12626026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 17823540 - 17823611
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 17823611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 24245411 - 24245478
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaac 222  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  24245411 taaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 6760786 - 6760888
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 257  Q
    |||||||||||||||||||||||| |||| || ||  |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |||||    
T  6760786 cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtac 6760885  T
Q  258 aat 260  Q
    |||    
T  6760886 aat 6760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 13160662 - 13160767
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||  |||| |||||| |||||| | |||||| | |||||||||| |    
T  13160662 taacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-cagggtaaggctgc 13160760  T
Q  254 gtacaat 260  Q
    |||||||    
T  13160761 gtacaat 13160767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 16013515 - 16013593
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| | |||||| |||||||||||| |||||||    
T  16013515 tacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtccttttt 16013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 22598133 - 22598223
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    |||||||||||| |||  || ||||||||||||||||||| ||||||||||||||||||| | |||||| | ||||||||||| |||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaat 22598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 35261639 - 35261745
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||   ||||||||||  ||||| | |||||| | |||||||| | |    
T  35261639 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgc 35261738  T
Q  254 gtacaat 260  Q
    |||||||    
T  35261739 gtacaat 35261745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 348 - 428
Target Start/End: Original strand, 35261740 - 35261818
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||||||  | ||||||||||||||  ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  35261740 tacaatacaccaaa--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttta 35261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 7136608 - 7136524
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||| |||||||||    
T  7136608 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttaccctttttt 7136524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 20869979 - 20870063
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| ||| ||||||||||||||  ||||| || |||||| | |||||| |||||||||||||||||||||    
T  20869979 ctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 20870063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 6760883 - 6760962
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||| ||| ||||||||||||| | ||||| || |||||| | |||||| |||||||||||||||||||||    
T  6760883 tacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 6760962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 18164930 - 18164859
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  18164930 cttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 18164859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 418
Target Start/End: Complemental strand, 20284150 - 20284075
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttg 418  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | | |||| ||||||||||||    
T  20284150 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 418
Target Start/End: Complemental strand, 21070778 - 21070703
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttg 418  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | | |||| ||||||||||||    
T  21070778 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 8897939 - 8897833
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||| |||| ||||||||||||||||| ||||||| | | ||||||||||||| |  |||||||||||||| ||| | ||||||   ||||||||||||    
T  8897939 taaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctac 8897840  T
Q  254 gtacaat 260  Q
    |||||||    
T  8897839 gtacaat 8897833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 26954189 - 26954271
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||  || |||||| | |||||| ||||| |||||||||||||    
T  26954189 ctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttt 26954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 427
Target Start/End: Original strand, 26102577 - 26102655
Alignment:
Q  347 atacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  26102577 atacaatacaccaaa--tggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttttt 26102655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 8897838 - 8897761
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||  | ||||||||||||||| |||||||| |||||| | |||||| |||||| ||||||||||||||    
T  8897838 tacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttttt 8897761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 25250474 - 25250550
Alignment:
Q  147 atgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||| ||| ||||||||  |||||  |||||||||||    
T  25250474 atgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaaca 25250550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 28817684 - 28817624
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||| |||||||||||||||    
T  28817684 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgcccttttt 28817624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 35105902 - 35105958
Alignment:
Q  174 aaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctctt 35105958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 44781677 - 44781606
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||| ||| ||| ||||||| |||||||||||  ||||||||||||||||||    
T  44781677 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctctt 44781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 25250578 - 25250661
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||| ||| |||||||||||||||  |||| || |||||| | | |||| ||||||||||||||||||||    
T  25250578 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgcccttttt 25250661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 28407475 - 28407538
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||| |||||| |||||||| | |||||| ||||||||||||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 36720852 - 36720932
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||||||||||   |||||| |||||| ||||||||||||    
T  36720852 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttt 36720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 44530205 - 44530285
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||  ||||||||||||||| | |||||| |||||||||||| ||||||    
T  44530205 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgacctttt 44530285  T

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Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 44781580 - 44781517
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcac 411  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||| | |||||| |||||    
T  44781580 tacaatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcac 44781517  T

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Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 13160757 - 13160836
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||| | ||| ||||||||||||||    
T  13160757 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttt 13160836  T

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Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 29521764 - 29521685
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | |||||| ||| |||||||||||||||||||| | |||||| ||||||||||||| ||||    
T  29521764 ctgcgtacaatacaccaaa--tggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccgggttgctcttt 29521685  T

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Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 30454160 - 30454094
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  30454160 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 30454094  T

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Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 45071225 - 45071330
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||  ||||||||||||||| |||||||  || |||||||||||||||  | ||||||||| |||||| | |||||| | |||||||||| |    
T  45071225 taaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 45071323  T
Q  254 gtacaat 260  Q
    |||||||    
T  45071324 gtacaat 45071330  T

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Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 12670329 - 12670247
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||| |||||||||    
T  12670329 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttaccctttttt 12670247  T

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Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 16225075 - 16225156
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||| || |||||| | |||||| |||||||||||| |||||    
T  16225075 ctgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccgggttgtccttt 16225156  T

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Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 31457155 - 31457208
Alignment:
Q  177 gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||| |||||||||||||||||||||||||||  ||||| ||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctctt 31457208  T

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Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 423
Target Start/End: Original strand, 45071320 - 45071398
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| |||||||||| | |||| | |||||||||||||||||    
T  45071320 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

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Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 27468141 - 27468089
Alignment:
Q  375 cttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 27468089  T

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Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 37698567 - 37698620
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 344  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||    
T  37698567 tggcccatttctatagtcgggcctc--ggggccgggccggcccatttgacacctct 37698620  T

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Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 11748259 - 11748353
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc-tttataaaaagcggggtaag 248  Q
    |||| |||| ||||||||| || ||||| ||||||| |||||| ||||||||||||  || |||||||| |||| ||| |||||||| |||||||    
T  11748259 taactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaag 11748353  T

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Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 27507987 - 27508044
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||||||||||||||  |||||||||||||| | |||||| |||||||||||| ||||    
T  27507987 gtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgggttgtcctt 27508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 42083870 - 42083806
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||| |||||| ||||| ||| ||| |||||||||||||||||||  |||||||||||    
T  42083870 ccttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 42083806  T

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Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 43942380 - 43942421
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagac 384  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  43942380 ctgcgtacaatacaccaaaaatggtgggaccccttcccagac 43942421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 10857906 - 10857966
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||||| |||||  |||| |||||||||| | |||||| ||||||||||||||||||||    
T  10857906 gtgggaccacttcctggaccttgcgtatgcgggagctttagtgcaccgggttgcccttttt 10857966  T

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Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 18405319 - 18405374
Alignment:
Q  291 gcccatttctatagttgggcctctcgggcccgggccggc--ccatttgacacctct 344  Q
    ||||||||||||||| |||||||||||||| | ||||||  |||||||||||||||    
T  18405319 gcccatttctatagtcgggcctctcgggcctgagccggcggccatttgacacctct 18405374  T

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Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 27127153 - 27127213
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 344  Q
    ||||||||||||||||| |||||||||||||     |||||| ||||||||||||||||||    
T  27127153 tggcccatttctatagtcgggcctctcgggcttgggccgggctggcccatttgacacctct 27127213  T

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Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 422
Target Start/End: Original strand, 29877150 - 29877227
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | || ||| |||||| || ||||||    
T  29877150 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccct 29877227  T

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Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 31454152 - 31454216
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||||||| |||| ||||||| |||||||| |||||||||||  |||||| ||||| |||||    
T  31454152 cttggcgcaaccggtatagttgttgtcatgtggttgaaaggtcacatgttcatgtcctgaaaaca 31454216  T

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Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 369 - 425
Target Start/End: Original strand, 31457252 - 31457308
Alignment:
Q  369 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||| |||||||||||||| | ||| || |||||||| ||||||||||    
T  31457252 ggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttt 31457308  T

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Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 35107374 - 35107310
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||| ||| ||| |||||||   |||||| |||||||||||||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

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Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 5135363 - 5135288
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||||  | ||||||||||||||| ||||||||||||||  | |||||  ||||||||| ||||||||||    
T  5135363 tacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcaggagcttt-gtgcaccgggctgcccttttt 5135288  T

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Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 26954092 - 26954167
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||| |||||| || ||||||||||||| |||||||  |  |||||||||||||||  ||||||||||| ||||||    
T  26954092 taactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctctt 26954167  T

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Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 2626578 - 2626657
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  |  ||||||||||||||||||||||| |||||| | |||| | |||||| | |||||||||    
T  2626578 ctgcgtacaatacaccaaa--tgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcaccagattgcccttt 2626657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 12625858 - 12625924
Alignment:
Q  164 cgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||| || |||| ||   |||||||||| |||  ||||||||||||||||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctctt 12625924  T

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Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 376 - 426
Target Start/End: Complemental strand, 18164808 - 18164758
Alignment:
Q  376 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||| ||||||||||||||| | |||||| |||||||||||||| |||||    
T  18164808 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccattttt 18164758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 8483996 - 8483947
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccggg 415  Q
    |||||||||| |||||||||||||||||||| | ||||||  ||||||||    
T  8483996 gtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccggg 8483947  T

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Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 30232764 - 30232820
Alignment:
Q  292 cccatttctatagttgggcctctcgggcccgggccggcccatttgacacctctgcata 349  Q
    ||||||| | ||||||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  30232764 cccatttatgtagttgggcctctcgagcc-gggccagcccatttgacacctctacata 30232820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 44598998 - 44598941
Alignment:
Q  292 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 344  Q
    |||||||||||||| |||||||||||| ||     |||||||||||||||||||||||    
T  44598998 cccatttctatagtcgggcctctcgggtccgggctgggccggcccatttgacacctct 44598941  T

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Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 46354154 - 46354260
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  46354154 taaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 46354253  T
Q  254 gtacaat 260  Q
    |||||||    
T  46354254 gtacaat 46354260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 11617762 - 11617657
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 254  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||||||||| | |||||| | ||||||| || ||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcg 11617663  T
Q  255 tacaat 260  Q
    ||||||    
T  11617662 tacaat 11617657  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 42496019 - 42495926
Alignment:
Q  146 catgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    |||||| | |||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  42496019 catgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 42495926  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 2541195 - 2541091
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggct-gaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 252  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||     
T  2541195 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 2541096  T
Q  253 cgtac 257  Q
    |||||    
T  2541095 cgtac 2541091  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 47078028 - 47077960
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  47078028 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47077960  T

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Target: chr7; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 48735296 - 48735220
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcc-tggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  48735296 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctctt 48735220  T

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Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 21172182 - 21172107
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  21172182 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctctt 21172107  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 32758221 - 32758296
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  32758221 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 32758296  T

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Target: chr7; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 10693245 - 10693171
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10693171  T

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Target: chr7; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 35334999 - 35334921
Alignment:
Q  145 tcatgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||  |||||||||||    
T  35334999 tcatgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca 35334921  T

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Target: chr7; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 42805484 - 42805590
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||      
T  42805484 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 42805583  T
Q  254 gtacaat 260  Q
    |||||||    
T  42805584 gtacaat 42805590  T

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Target: chr7; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 43557432 - 43557538
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||  ||||||||||| |||||| | |||||| | | |||||||| |    
T  43557432 taaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgc 43557531  T
Q  254 gtacaat 260  Q
    |||||||    
T  43557532 gtacaat 43557538  T

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Target: chr7; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 7193045 - 7193120
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  7193045 taaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctctt 7193120  T

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Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 19427059 - 19426989
Alignment:
Q  160 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||||  ||||||||||| ||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 19426989  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 42798629 - 42798735
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||  ||||| | |||||| |  ||||||||| |    
T  42798629 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgc 42798728  T
Q  254 gtacaat 260  Q
    |||||||    
T  42798729 gtacaat 42798735  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 426
Target Start/End: Original strand, 42805585 - 42805663
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||||||    
T  42805585 tacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 42805663  T

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Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 47716419 - 47716525
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||| ||||||| |||||||||  |||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  47716419 taaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 47716518  T
Q  254 gtacaat 260  Q
    |||||||    
T  47716519 gtacaat 47716525  T

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Target: chr7; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 7879694 - 7879776
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||| | |||||||||||||||||||||    
T  7879694 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttttt 7879776  T

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Target: chr7; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 14732997 - 14732924
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||  ||||||||||| ||||    
T  14732997 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctc 14732924  T

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Target: chr7; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 27629596 - 27629669
Alignment:
Q  157 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||| |||| || | |||||||||||||||||  ||||||||||| ||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctctt 27629669  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 48123655 - 48123584
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||||  ||||||||||| ||||||    
T  48123655 ccttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctctt 48123584  T

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Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 5180332 - 5180257
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||  | ||||||||| ||||||    
T  5180332 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctctt 5180257  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 7794681 - 7794606
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||| |||||||||||||||||||| | ||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  7794681 taaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 7794606  T

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Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 18326994 - 18327069
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||  ||| ||||||| ||||||    
T  18326994 taaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctctt 18327069  T

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Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 27889395 - 27889312
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||  | ||||||||||||||||||||    
T  27889395 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttttta 27889312  T

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Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 33872070 - 33872009
Alignment:
Q  169 ctggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||| ||||||| |||||||||| ||||||||  ||||||||||||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctctt 33872009  T

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Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 42391179 - 42391097
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  42391179 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 42391097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 43557528 - 43557613
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggc-tttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| ||| |||||||||| |||| ||| ||||||||||| | || |||| |||||||||||||||||||||    
T  43557528 ctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttttt 43557613  T

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Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 47716515 - 47716596
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||  ||||||||||||||||||    
T  47716515 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttt 47716596  T

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Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 1424085 - 1424017
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||| ||||||||||||||||||||||| | ||||| ||| |||||||||| |||| ||||||||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaaca 1424017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 12473267 - 12473339
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||| ||||||  ||||||||||| |||||||  ||||| ||||||||||||    
T  12473267 ccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctctt 12473339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 32758320 - 32758397
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  32758320 tacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 32758397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 40463836 - 40463892
Alignment:
Q  154 ataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||    
T  40463836 ataaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttca 40463892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 3469251 - 3469176
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    ||||||||||||||||| | |||||||||||| |||||||| ||||||| | |||||| ||| | |||||||||||    
T  3469251 tacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgcgctgggttgccctt 3469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 21172088 - 21172008
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  21172088 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21172008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 28362316 - 28362214
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 256  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| ||||||  |||| |||||  |||||| | |||||| |  ||||||||| ||||    
T  28362316 ccttggcgcaac-ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgta 28362218  T
Q  257 caat 260  Q
    ||||    
T  28362217 caat 28362214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 16341254 - 16341344
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    |||||||||||||||||||   ||||||||||||||||||  | || |||||| |||||| | |||||| | |||||||||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaat 16341344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 22699145 - 22699079
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 221  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||| | |||||||  |||||||||    
T  22699145 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaa 22699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 33871989 - 33871914
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 420  Q
    |||| ||||||||||||||  | ||||||||||||||||||||||| ||||||| | |||||| |||||| |||||||    
T  33871989 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcaccaggttgcc 33871914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 35787343 - 35787268
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||  | | ||||||||||||| |||| |||||||||| | |||| |||||||||||||||||||||    
T  35787343 tacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgggttgccctttt 35787268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 427
Target Start/End: Original strand, 36602535 - 36602585
Alignment:
Q  377 tcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 36602585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 48735201 - 48735122
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||    
T  48735201 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 427
Target Start/End: Complemental strand, 38262274 - 38262193
Alignment:
Q  344 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||||||  |  ||||||||||||||  || ||||||||||| | |||||| |||||||| ||||||||||||    
T  38262274 tgcatacaatacaccaaa--tgatgggaccccttcccgaacactgcgtatgcgggagctttagtgcaccggattgccctttttt 38262193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 45019006 - 45018923
Alignment:
Q  343 ctgcatacaatacaccaaaaa--tagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||| ||||||||  | |||| |||||||||| ||||||||||||||| | |||||| |||||| |||||||||||    
T  45019006 ctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgcccttt 45018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 361 - 424
Target Start/End: Complemental strand, 2541082 - 2541019
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||| | ||||||||||||| | |||||| ||||||||||| ||||||    
T  2541082 aaatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggtttcccttt 2541019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 13805066 - 13805128
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 221  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||  |||||||||    
T  13805066 ccttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 351 - 394
Target Start/End: Original strand, 39123957 - 39124000
Alignment:
Q  351 aatacaccaaaaatagtgggaccccttcccagaccctgcgtatg 394  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  39123957 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 39124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 10693152 - 10693073
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||| ||||||||||||    
T  10693152 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttt 10693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 22699049 - 22698967
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccc-cttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||||| |||||||||  ||||| ||||||| ||||||| | ||| || ||||||||||| ||||||    
T  22699049 ctgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccgggttacccttt 22698967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 23419753 - 23419674
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | |||||||||||||| ||||| ||||| |||| |||||||| |||| |||| ||||||||    
T  23419753 ctgcgtacaatacaccaaa--tggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggctgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 34626271 - 34626205
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| |||||| |||||||| ||||||||||||||| | |||||| | || ||||||||||||||||    
T  34626271 aaatggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttttt 34626205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 423
Target Start/End: Complemental strand, 11617667 - 11617589
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||  | ||||||||||||||  ||||||||||||||  |  ||||| |||||||||||||||||    
T  11617667 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 33500569 - 33500622
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 396  Q
    |||| ||| |||||| |||||| ||||||||||||||| |||||||||||||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcg 33500622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 34626382 - 34626309
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    ||||||| |||||||||||||||||||| |||||||  ||||||| ||| | ||||  ||||||||||| ||||    
T  34626382 taaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctc 34626309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 422
Target Start/End: Complemental strand, 18512511 - 18512455
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    ||||||||||||||| ||||||||||||||| | |||||  ||||| ||||||||||    
T  18512511 gtgggaccccttcccggaccctgcgtatgcgggagctttggtgcactgggttgccct 18512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 28078306 - 28078238
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    ||||| |||||||||| || |||||||| ||||||| ||| |||||||||||||||  |||| ||||||    
T  28078306 taaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 28078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 29140531 - 29140487
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 203  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||    
T  29140531 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcac 29140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 31591172 - 31591108
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||| |||| ||| |||||| | ||| || |||||||||||||||||||    
T  31591172 aaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttt 31591108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 366 - 422
Target Start/End: Complemental strand, 35334874 - 35334818
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    ||||||||||||||| ||||||||||||||  | |||||| ||||||||||| ||||    
T  35334874 gtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 40463948 - 40464012
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| | ||||||||||||||| | |||| | ||||||| |||||||||||    
T  40463948 aaatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgccctttt 40464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 42476833 - 42476901
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||| |||||| |||||||||||||||| ||||||| || ||||||||||| ||||  | |||||||||    
T  42476833 taacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaaca 42476901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 42798725 - 42798806
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||| ||||| |||||||| |||||| | ||| || |||| |||||||||||||||    
T  42798725 ctgcgtacaatacaccaaa--tggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgcccttttt 42798806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 6736867 - 6736934
Alignment:
Q  172 gtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    ||||||||||| ||||| | |||||||||||||||||||  ||||  |||||||||||| ||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaa 6736934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 19265781 - 19265830
Alignment:
Q  160 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||| |||||||||||| ||| ||| |||||||||||||||||||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttca 19265830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 25198810 - 25198864
Alignment:
Q  373 cccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| |||||| | | |||||| ||||||||||||| |||||||    
T  25198810 cccttcccagacccttcgtatgtgagagctttagtgcaccgggttgcactttttt 25198864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 29907393 - 29907454
Alignment:
Q  171 ggtaaagttgtt--atcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||  |||||||| |||||||||||||||||||  |||| |||||| ||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt 29907454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 29907482 - 29907552
Alignment:
Q  350 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    ||||||||||||| | |||||||||| |||| |||||||  |||||| | |||||| |||||||||||||||||    
T  29907482 caatacaccaaaa-tggtgggaccccatcccggaccctg--tatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 42391251 - 42391205
Alignment:
Q  177 gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||| ||||||| |||||||||||||||||||  |||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 42391205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 3469350 - 3469306
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 203  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||    
T  3469350 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcac 3469306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 18747564 - 18747621
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    ||||||||||||||   |||||||||||||| | |||||| ||||||||| |||||||    
T  18747564 gtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 19426968 - 19426887
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||| ||| | |||||||| |||||| | |||| | |||||||||||||||||||||    
T  19426968 ctgcgtacaatacaccaaa--tggtgggaccc-ttctcggaccctgcatatgcgagagcttcagtgcaccgggttgccctttttt 19426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 23619040 - 23618975
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||| |||||| ||||| |||  | |||||| |||| |||||||||||||||    
T  23619040 aaatggtgggaccccttcgcagaccttgcgtttgcaggagctttagtgcagcgggttgcccttttt 23618975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 27629706 - 27629771
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||| | |||||| ||||||   |||| | ||||||||||||||||||||    
T  27629706 aaatggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgcccttttt 27629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 2e-24; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 8247864 - 8247758
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||| | |    
T  8247864 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgc 8247765  T
Q  254 gtacaat 260  Q
    |||||||    
T  8247764 gtacaat 8247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 29366897 - 29366791
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||| |||||| |||||||| | |||||||||| |    
T  29366897 taaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgc 29366798  T
Q  254 gtacaat 260  Q
    |||||||    
T  29366797 gtacaat 29366791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 40272987 - 40272881
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||  |||||||||||||||||| | |||||| | |||||||||| |    
T  40272987 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 40272888  T
Q  254 gtacaat 260  Q
    |||||||    
T  40272887 gtacaat 40272881  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 46421212 - 46421106
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| |    
T  46421212 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 46421113  T
Q  254 gtacaat 260  Q
    |||||||    
T  46421112 gtacaat 46421106  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 10870126 - 10870051
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10870126 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10870051  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 13628871 - 13628789
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  13628871 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 13628789  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 13730779 - 13730673
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||| | |||||| | ||||||||||      
T  13730779 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgt 13730680  T
Q  254 gtacaat 260  Q
    |||||||    
T  13730679 gtacaat 13730673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 343 - 429
Target Start/End: Complemental strand, 40272891 - 40272807
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 429  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  40272891 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttttat 40272807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 52926385 - 52926310
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| ||||||    
T  52926385 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 52926310  T

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Target: chr3; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 344 - 426
Target Start/End: Complemental strand, 5173799 - 5173717
Alignment:
Q  344 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||| ||||||||||||||| ||||| ||||||||| |||| |||||||||| | |||||| ||||||||||||||||||||    
T  5173799 tgcatgcaatacaccaaaaatggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgcccttttt 5173717  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 45786295 - 45786214
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||  | |||||| ||||||||||||||||||    
T  45786295 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 46421116 - 46421031
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | ||||||| |||||||| ||||||||||||    
T  46421116 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggtttgccctttttt 46421031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 5173896 - 5173820
Alignment:
Q  155 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  5173896 taaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 5173820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 7697060 - 7696992
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||  |||||||||||    
T  7697060 taaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaaca 7696992  T

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Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 54484769 - 54484850
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  54484769 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 54484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 1217072 - 1217147
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||  ||||||||||| ||||||    
T  1217072 taaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctctt 1217147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 13628968 - 13628861
Alignment:
Q  155 taaccttggcgcaactggtaaa-gttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 252  Q
    |||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | ||| || | ||||||||||     
T  13628968 taaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctg 13628869  T
Q  253 cgtacaat 260  Q
    ||||||||    
T  13628868 cgtacaat 13628861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 13730678 - 13730599
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  13730678 tacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 13730599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 16735423 - 16735528
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||  |||| |||||| |||||| || ||||| | |||||||||| |    
T  16735423 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaa-cagggtaaggctgc 16735521  T
Q  254 gtacaat 260  Q
    |||||||    
T  16735522 gtacaat 16735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 29366801 - 29366719
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||| | | |||||| ||||| |||||||||||||    
T  29366801 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgccctttt 29366719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 10795504 - 10795423
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||||| ||||||||||||||  ||||||||||||||| | |||| | |||||| |||||||||||    
T  10795504 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 10795423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 343 - 428
Target Start/End: Complemental strand, 49013554 - 49013469
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || || ||| | |||||| ||||||||||||||||||||||    
T  49013554 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgccctttttta 49013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 35417902 - 35417973
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||||||||| ||||||    
T  35417902 ccttggcgcaac-ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctctt 35417973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 353430 - 353351
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||    
T  353430 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 359 - 426
Target Start/End: Original strand, 516504 - 516571
Alignment:
Q  359 aaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||| | ||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  516504 aaaaatggcgggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 9607185 - 9607260
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||||  ||||||  ||||||||||| ||||||    
T  9607185 taaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctctt 9607260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 260
Target Start/End: Original strand, 26573113 - 26573215
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct-ctttataaaaagcggggtaaggctacgta 256  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  ||||||||||| ||| || | |||||| | |||||||||| ||||    
T  26573113 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgta 26573211  T
Q  257 caat 260  Q
    ||||    
T  26573212 caat 26573215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 26869696 - 26869763
Alignment:
Q  162 ggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctct 229  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| |||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctct 26869763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 4495839 - 4495733
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||  ||||| ||| | ||| || | |||||| | |||||||||| |    
T  4495839 taaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgc 4495740  T
Q  254 gtacaat 260  Q
    |||||||    
T  4495739 gtacaat 4495733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 12914109 - 12914034
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||  | ||| |||||||||||||||||||| |||||| | |||| |||||||||||||||||||||    
T  12914109 tacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgccctttt 12914034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 12914210 - 12914104
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| | ||||| | ||||||||||  |||||  ||||||||||| |||||| | |||||| | |||||||||  |    
T  12914210 taaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggc 12914111  T
Q  254 gtacaat 260  Q
    |||||||    
T  12914110 gtacaat 12914104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 45139557 - 45139505
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 396  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  45139557 ctgcatacaatacaccaaaaatggtgggaccccttcccaga-cctgcgtatgcg 45139505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 52926298 - 52926216
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||| ||||||| ||||||||||||||| | ||||||  ||||||||||||||||||||    
T  52926298 ctgcgtacaatacaccaaa--tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttttt 52926216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 8247763 - 8247683
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 427  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||||| | ||||||| ||||| |||||||||| ||||    
T  8247763 tacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagctttaagtgcactgggttgccctatttt 8247683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 22123090 - 22123022
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||||| ||||||||  |||||||||||    
T  22123090 taaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 22123022  T

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Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 34420815 - 34420716
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 256  Q
    |||||||||||| | |||||||||| ||| ||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| ||||    
T  34420815 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 34420717  T

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Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 9144865 - 9144810
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 344  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  9144865 tggcccatttctataggcaggcctctcgggctcgggccggcccatttgacacctct 9144810  T

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Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 15797298 - 15797382
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 429  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||| | | ||| || |||||||||||||||||||||||    
T  15797298 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttttttat 15797382  T

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Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 25517249 - 25517169
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||  ||||| ||||||||||||||| || |||||||||||  | |||||| |||||||||||||||||||    
T  25517249 ctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgccctttt 25517169  T

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Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 39203498 - 39203573
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||| ||||| ||||||||||| ||||||| |||||||||||| ||||||  |||| |||||| ||||||    
T  39203498 taaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctctt 39203573  T

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Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 53996645 - 53996563
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||| | ||||||||||||||| ||| ||||||||| | | |||||| ||||||||| ||||||||||    
T  53996645 ctgcttacaatacaccaaaa-tggtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgcccttttt 53996563  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 22609749 - 22609853
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||||| |||||||||  || |||||||| |||||| | |||||| | |||||||||| |    
T  22609749 taaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaa-cagggtaaggctgc 22609846  T
Q  254 gtacaat 260  Q
    |||||||    
T  22609847 gtacaat 22609853  T

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Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 24851364 - 24851298
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||| || ||||| |||||| | |||||| |||||||||||||||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttttt 24851298  T

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Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 25517350 - 25517300
Alignment:
Q  153 gataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcac 203  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  25517350 gataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 14987035 - 14987116
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||| ||| ||||||||| ||||| |||| ||| |||||| | |||||| ||||||||||| ||||||    
T  14987035 ctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagctttagtgcaccgggtttcccttt 14987116  T

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Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 423
Target Start/End: Complemental strand, 22122996 - 22122918
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||    
T  22122996 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

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Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 423
Target Start/End: Original strand, 22609843 - 22609921
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| |||||||||| | |||| | |||||||||||||||||    
T  22609843 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 26869784 - 26869866
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | |||||||||||| || |||| |||||||||| | |||||  |||||||||||||||||||||    
T  26869784 ctgcgtacaatacaccaaa--tggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttttt 26869866  T

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Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 39203597 - 39203671
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||  | ||||||||||||||| |||| ||| |||||| | |||||| ||||||||||||||||||    
T  39203597 tacaatacaccaaa--tggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttt 39203671  T

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Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 1217166 - 1217247
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | | ||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  1217166 ctgcgtacaatacaccaaa--tggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 1217247  T

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Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 425
Target Start/End: Complemental strand, 10484671 - 10484615
Alignment:
Q  369 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||||||||||  ||||||||||||||| | |||||| |||||||||||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10484615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 34771443 - 34771362
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||| ||||||||||    
T  34771443 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttttt 34771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 45621000 - 45620929
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||  | ||||||||| ||||||    
T  45621000 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctctt 45620929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 50462768 - 50462708
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 344  Q
    ||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  50462768 tggcccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 50462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 12525392 - 12525486
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggct 251  Q
    ||||||||||||||||||||||||||   |||| || |||||||||||| |||||   ||||||||||| |||||| | |||||| | ||||||||||    
T  12525392 taaccttggcgcaactggtaaagttg---tcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 25944552 - 25944630
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||| | | ||||||  ||||| || |||||||||||    
T  25944552 tacaatacaccaaaa-tggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggctgccctttttt 25944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 30452894 - 30452953
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  30452894 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 47624208 - 47624259
Alignment:
Q  376 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 47624259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 4495718 - 4495672
Alignment:
Q  382 gaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  4495718 gaccctgcgtatgcgggagctttagtgcaccgggttgccctttttta 4495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 6411996 - 6411891
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||| ||||||||||||||||||| ||||||  |||| |||||| |||||||  || || ||||| |||||| | |||||| | |||||||||| |    
T  6411996 taaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa-cagggtaaggctgc 6411898  T
Q  254 gtacaat 260  Q
    |||||||    
T  6411897 gtacaat 6411891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 31592925 - 31593004
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||| ||||||| |||||||| |||||| | ||| || ||||||||||||||||||    
T  31592925 ctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 516420 - 516497
Alignment:
Q  184 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||| | |||||||||| || |||||    
T  516420 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaat 516497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 29322878 - 29322821
Alignment:
Q  292 cccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 344  Q
    |||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  29322878 cccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 29322821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 45949012 - 45948938
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaa---aggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||| ||| |||||||| ||||||| |||||   ||||||||||||||  ||||||||||||||||||    
T  45949012 ccttggcgcaac-ggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctctt 45948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 53062036 - 53062093
Alignment:
Q  171 ggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctc 228  Q
    |||||||||||| ||||||| ||||||||||||| |||||  ||||||||||| ||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctc 53062093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 54032705 - 54032628
Alignment:
Q  184 tcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 260  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||||| | |||||| | |||||||||| | ||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaat 54032628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 829517 - 829438
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||||  | |||||| ||||||||  || |||||||||    
T  829517 tacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccggtctgtcctttttta 829438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 40390357 - 40390401
Alignment:
Q  383 accctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||| | |||||| |||||||||||||||||||||    
T  40390357 accctgcgtatgcgggagctttagtgcaccgggttgccctttttt 40390401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 414
Target Start/End: Complemental strand, 45948917 - 45948848
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgg 414  Q
    ||||||||||||||||||   | ||||||||||||| | ||||||||||||||| | |||||| ||||||||    
T  45948917 ctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgg 45948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 6411901 - 6411833
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccg 413  Q
    |||| ||||||||||||||  |  ||||||||||||||||||| |||||||||| | |||||| |||||||    
T  6411901 ctgcgtacaatacaccaaa--tgatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccg 6411833  T

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Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 16735518 - 16735598
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| ||| |||||||||||   |||| | ||||| |||||||||||||    
T  16735518 ctgcgtacaatacaccaaa--tggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttt 16735598  T

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Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 30928302 - 30928247
Alignment:
Q  175 aagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||| || ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 30928247  T

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Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 53996737 - 53996635
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgta 256  Q
    ||||||||| || |||||| ||||| |||| || ||||||||||||| |||||  || ||||||||||||||| | |||||| | |||||||||| | ||    
T  53996737 ccttggcgctac-ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgctta 53996639  T
Q  257 caat 260  Q
    ||||    
T  53996638 caat 53996635  T

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Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 425
Target Start/End: Complemental strand, 54032613 - 54032570
Alignment:
Q  382 gaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||||| | |||||| |||||||||||||||||||    
T  54032613 gaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 54032570  T

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Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 353 - 427
Target Start/End: Original strand, 12525493 - 12525567
Alignment:
Q  353 tacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||| ||||||| |||||| |||||||| |||| || | |||| | |||||| |||||| |||||||    
T  12525493 tacaccaaaaatggtgggacaccttcctagaccctgtgtatacgggagcttcactgcaccaggttgctctttttt 12525567  T

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Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 429
Target Start/End: Complemental strand, 54374425 - 54374340
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 429  Q
    |||| |||||| |||||||| | ||||||||||||||| |||||||| |||||| | |||||| | |||| || |||| ||||||||    
T  54374425 ctgcgtacaatccaccaaaa-tggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgccattttttat 54374340  T

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Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 26573226 - 26573287
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||| |||| ||||||||||||||| | |||||| |||||| || |||||| ||||    
T  26573226 gtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccctctttt 26573287  T

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Target: chr6 (Bit Score: 58; Significance: 6e-24; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 12885964 - 12886049
Alignment:
Q  340 cctctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| | | |||||| |||||||||||||||||||    
T  12885964 cctctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttt 12886049  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 343 - 426
Target Start/End: Complemental strand, 29355936 - 29355853
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  29355936 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 29355853  T

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Target: chr6; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 12222088 - 12221986
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtac 257  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||  || |||||||| |||||| | |||||| | |||||||||| |||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  258 aat 260  Q
    |||    
T  12221988 aat 12221986  T

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Target: chr6; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 1346924 - 1346992
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  1346924 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 1346992  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 1354930 - 1354855
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  1354930 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctctt 1354855  T

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Target: chr6; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 8409203 - 8409309
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||  ||||||||||  |||||| | |||||| | |||||||||| |    
T  8409203 taaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgc 8409302  T
Q  254 gtacaat 260  Q
    |||||||    
T  8409303 gtacaat 8409309  T

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Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 3815252 - 3815184
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||    
T  3815252 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaaca 3815184  T

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Target: chr6; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 12221996 - 12221913
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggc-tttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | || |||| |||||||||||||||||||    
T  12221996 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

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Target: chr6; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 14975263 - 14975180
Alignment:
Q  147 atgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||| |||||||||| ||||  ||||||||||| ||||||    
T  14975263 atgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctctt 14975180  T

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Target: chr6; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 24734587 - 24734668
Alignment:
Q  149 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||||   ||||| ||||| |||||||||||||    
T  24734587 gagaggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctctt 24734668  T

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Target: chr6; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 351 - 427
Target Start/End: Original strand, 12892071 - 12892147
Alignment:
Q  351 aatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  12892071 aatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 12892147  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 2166579 - 2166512
Alignment:
Q  163 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  2166579 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 2166512  T

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Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 2178212 - 2178145
Alignment:
Q  163 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  2178212 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 2178145  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 29356033 - 29355926
Alignment:
Q  155 taaccttggcgcaactggtaaag-ttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggcta 252  Q
    |||||||||| |||||||||||  ||||| ||||||| |||||||||||||||||||  ||||||||||| |||||| | ||| || | ||||||||||     
T  29356033 taaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctg 29355934  T
Q  253 cgtacaat 260  Q
    ||||||||    
T  29355933 cgtacaat 29355926  T

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Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 3116204 - 3116126
Alignment:
Q  349 acaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||||||||||||||| ||||||||||||| | |||| |||||||||| | |||||| | |||||| ||||||||||||    
T  3116204 acaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccggattgccctttttt 3116126  T

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Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 13905152 - 13905047
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacg 254  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||  ||||| |||| ||||||| | |||||| | |||||||||| |     
T  13905152 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgca 13905054  T
Q  255 tacaatt 261  Q
    |||||||    
T  13905053 tacaatt 13905047  T

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Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 1347018 - 1347100
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  1347018 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 1347100  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 2166486 - 2166406
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||||| ||| ||||||||||||||| ||||||   ||| || | |||||| ||||||||||||||||||||||    
T  2166486 tacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttttta 2166406  T

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Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 2178119 - 2178039
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||||| ||| ||||||||||||||| ||||||   ||| || | |||||| ||||||||||||||||||||||    
T  2178119 tacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttttta 2178039  T

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Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 6808472 - 6808532
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||||| ||||||| ||||||| | |||||| ||||||||||||||||||||    
T  6808472 gtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttttt 6808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 9161178 - 9161262
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||| ||| ||| ||||||||||||| | |||||||||||||||   |||||| |||||| ||||||||||||||    
T  9161178 ctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttttt 9161262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 12063427 - 12063511
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaa 238  Q
    ||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||  |||| |||| | |||||| ||||||||    
T  12063427 taaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 1354836 - 1354756
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  1354836 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1354756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 9161083 - 9161158
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| |||||  |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  9161083 taaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctt 9161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 15866212 - 15866137
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||| |||||||||||||||||  ||||||  |||||||||| |||||||  ||||||||||| ||||||    
T  15866212 taaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctctt 15866137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 20400621 - 20400731
Alignment:
Q  149 gagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaa 247  Q
    ||||| |||||||||||||| ||||| ||||||| ||||||| |||||||||||| ||||||  |  ||||||||| ||||| | |||||| | ||||||    
T  20400621 gagaggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaa 20400720  T
Q  248 ggctacgtaca 258  Q
    | || ||||||    
T  20400721 gactgcgtaca 20400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 383834 - 383760
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||||||||||||  | ||||||||||||| ||||||||||||||||| | |||| | | ||||||||||||||||    
T  383834 tacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 13267797 - 13267862
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  ||||||||||||||| | |||| | ||||||||||||||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgcccttttt 13267862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 1941815 - 1941921
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||| |||||||||||||||||| |||| || ||| |||||| ||| || |  || || |||||||||||| | |||||| | |||||||||| |    
T  1941815 taaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgc 1941914  T
Q  254 gtacaat 260  Q
    |||||||    
T  1941915 gtacaat 1941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 6024202 - 6024268
Alignment:
Q  164 cgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||| |||||||  || |||||||||| |||| ||||| |||||| ||||||    
T  6024202 cgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctctt 6024268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 18277256 - 18277190
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| |||||||||||||| |||| || |||||||| | |||||| |||||||||||| ||||||||    
T  18277256 aaatggtgggaccccttcctagactctacgtatgcgggagctttactgcaccgggttgtcctttttt 18277190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 26097237 - 26097295
Alignment:
Q  368 gggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  26097237 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 26097295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 423
Target Start/End: Complemental strand, 2755503 - 2755422
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgg--gctttaatgcaccgggttgccctt 423  Q
    |||| ||||||||||||||||| ||||||  |||||||| | ||||| |||||||||  |||||| |||||| ||||||||||    
T  2755503 ctgcgtacaatacaccaaaaatggtgggagtccttcccaaatcctgcatatgcgcgggagctttagtgcacc-ggttgccctt 2755422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 2979117 - 2979156
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccgg 328  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  2979117 tggcccatttctatagtcgggcctctcgggctcgggccgg 2979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 7947543 - 7947441
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacct-ctttataaaaagcggggtaaggctacgta 256  Q
    |||||||||||| |||||||||| | |   ||| |||||||||||| ||||||  ||||||||||||||| || | |||||| | |||||||||| ||||    
T  7947543 ccttggcgcaac-ggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgta 7947445  T
Q  257 caat 260  Q
    ||||    
T  7947444 caat 7947441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 21038362 - 21038323
Alignment:
Q  289 tggcccatttctatagttgggcctctcgggcccgggccgg 328  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  21038362 tggcccatttctatagtcgggcctctcgggcccgagccgg 21038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 23930185 - 23930126
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    ||||||||||||| | |||||||| |||||| | |||||| ||||||| |||||||||||    
T  23930185 gtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttt 23930126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 428
Target Start/End: Original strand, 24097649 - 24097716
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    |||| ||||||||||||||| |||||||||||||||   |||||| ||  || |||||||||||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagctttagtgtcccaggttgccctttttta 24097716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 25557805 - 25557860
Alignment:
Q  371 accccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  25557805 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 25557860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 33923003 - 33922948
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    ||||||||||||||| |||||||||||| |||| || |||||| ||||| ||||||    
T  33923003 taaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttca 33922948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 8417442 - 8417500
Alignment:
Q  165 gcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||||||||||| ||||||| |||||| |||||| |||||  || ||||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaaca 8417500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 366 - 424
Target Start/End: Complemental strand, 10734963 - 10734905
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    ||||| ||||||||| ||||||||||||||| | |||||| | ||||||| ||||||||    
T  10734963 gtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttt 10734905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 14975164 - 14975094
Alignment:
Q  350 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 420  Q
    ||||||||||| ||| |||||||||||||||  |||| || |||||| | | |||| ||||||||||||||    
T  14975164 caatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccgggttgcc 14975094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 19649338 - 19649292
Alignment:
Q  159 cttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgg 205  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||    
T  19649338 cttggcgcaactgataaagttgttgtcatgtgactgaaagatcacgg 19649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 2978549 - 2978586
Alignment:
Q  259 attagagctgtcaaaaatgagccggtccattggcccat 296  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2978549 attagagctgtcaaaaatgggccggtccattgtcccat 2978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 14553477 - 14553537
Alignment:
Q  160 ttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaa 221  Q
    |||| |||||||||||||||||| ||||||| || ||||||||| ||||||  |||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaa 14553537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 59033 - 59114
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||| |||| |||||||||||||    
T  59033 ctgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttt 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 58937 - 59043
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctac 253  Q
    ||||||||| |||||||||||| || || ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||| | ||||||| || |    
T  58937 taaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgc 59036  T
Q  254 gtacaat 260  Q
    |||||||    
T  59037 gtacaat 59043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 53; Significance: 6e-21; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 13082 - 13022
Alignment:
Q  366 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  13082 gtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgcccttttt 13022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 13198 - 13123
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  13198 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctctt 13123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 52; Significance: 2e-20; HSPs: 6)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 10223 - 10148
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  10223 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 20551 - 20476
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||| ||||||    
T  20551 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 20476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 10129 - 10052
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||| ||||||||||||||  ||||||||||||||||| |||||||| |||||  | |||  | ||||||||||||||||    
T  10129 ctgcgtacaatacaccaaa--tagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgccct 10052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 20457 - 20380
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 422  Q
    |||| ||||||||||||||  ||||||||||||||||| |||||||| |||||  | |||  | ||||||||||||||||    
T  20457 ctgcgtacaatacaccaaa--tagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgccct 20380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 8905 - 8960
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| ||||| ||||||    
T  8905 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttca 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 19233 - 19288
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| ||||| ||||||    
T  19233 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttca 19288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 30539 - 30614
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||  ||||||||||| ||||||    
T  30539 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctctt 30614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 30633 - 30714
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 426  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  30633 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 30714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 1e-18; HSPs: 5)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 46892 - 46969
Alignment:
Q  348 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  46892 tacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 46969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 344 - 428
Target Start/End: Complemental strand, 46786 - 46703
Alignment:
Q  344 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 428  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||| | ||||||||||| | || ||||| ||||||    
T  46786 tgcatacaatataccaaaa-tggtgggaccccttcccagaccctgcgtatgcgggagctttaatgcatcaggctgcccattttta 46703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 24942 - 24887
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  24942 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttca 24887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 46794 - 46866
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||| ||||||||||||| ||||||| ||  |||||||||||||||  | ||||||||||||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctctt 46866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 24835 - 24769
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| |||||||||||||||  |||||||||||||| | |||||| |||| | ||||||||||||||    
T  24835 aaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcagccggttgccctttttt 24769  T

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Target: scaffold0005 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 226581 - 226506
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||  |||| |||||| ||||||    
T  226581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctctt 226506  T

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Target: scaffold0223 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 11093 - 11166
Alignment:
Q  156 aaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctctt 11166  T

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Target: scaffold0223; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 11185 - 11264
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | ||||||| ||||||| |||||||| |||||| | ||| || |||||| |||||||||||    
T  11185 ctgcttacaatacaccaaa--tggtgggacaccttcccggaccctgcatatgcgggagctctagtgcaccaggttgcccttt 11264  T

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Target: scaffold0024 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 83826 - 83904
Alignment:
Q  146 catgagagataaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaa 224  Q
    |||||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||  || |||||||||    
T  83826 catgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

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Target: scaffold0254 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 4125 - 4192
Alignment:
Q  163 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||| ||||||||||| | ||||| |||||||||||||||||||  ||||||||||||||||||    
T  4125 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctctt 4192  T

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Target: scaffold1176 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 1758 - 1685
Alignment:
Q  157 accttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||| ||||| ||||||||||||| ||||||| ||||||||||| |||||||  ||||| ||||||||||||    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctctt 1685  T

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Target: scaffold1176; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 1666 - 1591
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 420  Q
    |||||||||||||||||||  |  |||||||||||||| ||||| ||||||||| | |||||| |||||| |||||||    
T  1666 ctgcatacaatacaccaaa--tgatgggaccccttcccggacccggcgtatgcgggagctttagtgcaccaggttgcc 1591  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 425
Target Start/End: Complemental strand, 48713 - 48633
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  48713 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 48633  T

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Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 24212 - 24130
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 427  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||| ||||||||||||    
T  24212 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgccctttttt 24130  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 10773 - 10825
Alignment:
Q  158 ccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttca 210  Q
    |||||| |||||||||||||||||| ||||||| ||| |||||||||||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttca 10825  T

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Target: scaffold0311; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 10882 - 10946
Alignment:
Q  361 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 425  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||| ||||| ||||||| |||||    
T  10882 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcactgggttgctctttt 10946  T

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Target: scaffold0116 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 8865 - 8926
Alignment:
Q  169 ctggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||  ||||||||||||| ||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttctt 8926  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 24624 - 24692
Alignment:
Q  155 taaccttggcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaaca 223  Q
    |||||||||| ||| || |||||||||| ||| ||| ||| |||||||||||||||  |||||||||||    
T  24624 taaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaaca 24692  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 43097 - 43164
Alignment:
Q  163 gcgcaactggtaaagttgttatcatgtggctgaaaggtcacgggttcatatcctggaaacaacctctt 230  Q
    ||||||||||||||||| || |||||||  |||||||||||| |||||  |||| |||||| ||||||    
T  43097 gcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctctt 43164  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 424
Target Start/End: Complemental strand, 72946 - 72867
Alignment:
Q  343 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 424  Q
    |||| ||||||||||||||  | || | |||||||||| || |||||||||||| | |||||| |||||| |||||||||||    
T  72946 ctgcctacaatacaccaaa--tggtagtaccccttcccggaacctgcgtatgcgggagctttagtgcaccaggttgcccttt 72867  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 73034 - 73001
Alignment:
Q  157 accttggcgcaactggtaaagttgttatcatgtg 190  Q
    |||||||||||||||||||||||||| |||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtg 73001  T

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Target: scaffold0242 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 4232 - 4289
Alignment:
Q  292 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 344  Q
    |||||||||||||| |||| ||||||||||     |||||||||||||||||||||||    
T  4232 cccatttctatagtcgggcttctcgggcccgggctgggccggcccatttgacacctct 4289  T

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