View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4605-Insertion-2 (Length: 982)

Name: NF4605-Insertion-2
Description: NF4605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4605-Insertion-2
NF4605-Insertion-2
[»] chr1 (84 HSPs)
chr1 (228-513)||(44875091-44875376)
chr1 (228-514)||(23873789-23874075)
chr1 (228-514)||(46949233-46949519)
chr1 (229-514)||(25990661-25990946)
chr1 (228-514)||(26907053-26907337)
chr1 (228-514)||(40219969-40220257)
chr1 (228-514)||(28916478-28916763)
chr1 (228-514)||(40935575-40935861)
chr1 (228-515)||(38942401-38942689)
chr1 (228-512)||(40960438-40960722)
chr1 (228-514)||(18036457-18036742)
chr1 (228-514)||(28017570-28017854)
chr1 (228-514)||(18852135-18852421)
chr1 (228-514)||(29488660-29488946)
chr1 (228-514)||(35941753-35942039)
chr1 (228-512)||(43656001-43656284)
chr1 (228-514)||(49924331-49924617)
chr1 (228-522)||(15285716-15286009)
chr1 (228-520)||(9127955-9128248)
chr1 (228-512)||(31970273-31970556)
chr1 (238-514)||(39026207-39026484)
chr1 (228-515)||(26479651-26479939)
chr1 (235-514)||(45357837-45358117)
chr1 (232-515)||(35189116-35189401)
chr1 (248-515)||(15311110-15311376)
chr1 (240-514)||(18913306-18913582)
chr1 (230-514)||(6848272-6848550)
chr1 (238-512)||(4529109-4529371)
chr1 (246-502)||(47996884-47997140)
chr1 (8-193)||(52782609-52782792)
chr1 (516-811)||(52782336-52782611)
chr1 (228-487)||(35884134-35884382)
chr1 (238-514)||(36383850-36384126)
chr1 (235-397)||(44056377-44056540)
chr1 (827-953)||(31833893-31834019)
chr1 (229-404)||(41063657-41063833)
chr1 (229-365)||(16661431-16661569)
chr1 (319-514)||(24728585-24728781)
chr1 (826-916)||(19472837-19472929)
chr1 (230-402)||(7397624-7397796)
chr1 (459-514)||(36037380-36037435)
chr1 (230-417)||(51338953-51339142)
chr1 (830-945)||(8462976-8463096)
chr1 (826-914)||(12172995-12173083)
chr1 (229-402)||(15912116-15912288)
chr1 (317-469)||(3861699-3861849)
chr1 (284-371)||(25185406-25185492)
chr1 (317-514)||(15959601-15959796)
chr1 (230-431)||(51840537-51840740)
chr1 (318-402)||(13351686-13351770)
chr1 (378-514)||(44148795-44148931)
chr1 (826-916)||(38548712-38548806)
chr1 (280-371)||(44510321-44510411)
chr1 (229-431)||(5858413-5858617)
chr1 (831-945)||(42442015-42442135)
chr1 (319-481)||(52841437-52841599)
chr1 (378-480)||(52984999-52985101)
chr1 (317-514)||(28120714-28120911)
chr1 (228-281)||(44149044-44149097)
chr1 (229-281)||(7468165-7468217)
chr1 (319-431)||(10558798-10558910)
chr1 (826-913)||(26990643-26990730)
chr1 (229-281)||(28016956-28017008)
chr1 (829-945)||(41955891-41956015)
chr1 (235-275)||(43667487-43667527)
chr1 (822-945)||(47028938-47029067)
chr1 (230-346)||(35366330-35366447)
chr1 (319-418)||(37735438-37735537)
chr1 (836-914)||(46757347-46757425)
chr1 (229-275)||(6786734-6786780)
chr1 (319-481)||(42724101-42724263)
chr1 (229-281)||(298879-298931)
chr1 (229-281)||(6785353-6785405)
chr1 (229-281)||(6787203-6787255)
chr1 (235-275)||(12449154-12449194)
chr1 (826-858)||(28447816-28447848)
chr1 (235-275)||(32624193-32624233)
chr1 (229-397)||(34102049-34102216)
chr1 (235-275)||(39555773-39555813)
chr1 (317-480)||(39555579-39555742)
chr1 (301-431)||(13291778-13291908)
chr1 (229-275)||(15959858-15959904)
chr1 (822-851)||(30465024-30465053)
chr1 (318-371)||(45840167-45840220)
[»] chr8 (83 HSPs)
chr8 (228-514)||(35259972-35260258)
chr8 (228-514)||(27621045-27621331)
chr8 (228-522)||(3099867-3100163)
chr8 (230-514)||(27752503-27752787)
chr8 (228-514)||(11043972-11044258)
chr8 (228-514)||(37597985-37598270)
chr8 (228-512)||(44411171-44411456)
chr8 (228-510)||(35344281-35344565)
chr8 (228-506)||(24612445-24612726)
chr8 (228-518)||(44052535-44052826)
chr8 (230-514)||(11992644-11992929)
chr8 (235-514)||(25321546-25321825)
chr8 (228-514)||(39187149-39187431)
chr8 (228-493)||(36537973-36538238)
chr8 (228-512)||(35346267-35346550)
chr8 (284-514)||(31132991-31133219)
chr8 (230-514)||(32678477-32678753)
chr8 (228-449)||(33851048-33851269)
chr8 (249-457)||(44358508-44358716)
chr8 (257-456)||(37567449-37567648)
chr8 (296-514)||(34713511-34713729)
chr8 (228-514)||(12108084-12108357)
chr8 (228-514)||(2238555-2238828)
chr8 (299-512)||(41426325-41426538)
chr8 (283-514)||(24510657-24510886)
chr8 (338-461)||(40486505-40486628)
chr8 (282-479)||(34899894-34900090)
chr8 (822-945)||(40930829-40930954)
chr8 (228-449)||(16643296-16643519)
chr8 (228-358)||(16635490-16635620)
chr8 (229-371)||(17314744-17314887)
chr8 (235-402)||(8673302-8673469)
chr8 (228-358)||(16635354-16635488)
chr8 (230-293)||(31133765-31133828)
chr8 (229-431)||(5217306-5217509)
chr8 (453-514)||(37566457-37566518)
chr8 (228-358)||(16635622-16635756)
chr8 (317-514)||(34890133-34890331)
chr8 (319-480)||(29920262-29920423)
chr8 (268-345)||(40487794-40487870)
chr8 (826-945)||(5200485-5200608)
chr8 (284-402)||(17336713-17336830)
chr8 (822-946)||(13959218-13959348)
chr8 (239-431)||(2628207-2628400)
chr8 (826-952)||(24200625-24200754)
chr8 (235-371)||(41791563-41791699)
chr8 (398-512)||(2052947-2053061)
chr8 (831-945)||(25829272-25829392)
chr8 (319-483)||(27740611-27740772)
chr8 (229-343)||(17713137-17713252)
chr8 (245-402)||(25195118-25195277)
chr8 (317-514)||(26483535-26483731)
chr8 (828-888)||(38086419-38086480)
chr8 (229-281)||(13144174-13144226)
chr8 (386-470)||(15824641-15824725)
chr8 (260-342)||(16635786-16635871)
chr8 (826-918)||(22839289-22839383)
chr8 (235-402)||(26954464-26954632)
chr8 (319-436)||(4046932-4047049)
chr8 (260-348)||(16643195-16643284)
chr8 (229-281)||(4047107-4047159)
chr8 (822-858)||(7845137-7845173)
chr8 (241-370)||(27819585-27819715)
chr8 (317-501)||(36190775-36190959)
chr8 (282-402)||(41362379-41362498)
chr8 (238-346)||(28497641-28497750)
chr8 (317-404)||(35456094-35456181)
chr8 (238-281)||(41809016-41809059)
chr8 (229-275)||(34890393-34890439)
chr8 (317-493)||(8709767-8709941)
chr8 (235-275)||(7022591-7022631)
chr8 (235-275)||(7858460-7858500)
chr8 (318-402)||(8711881-8711965)
chr8 (229-281)||(24892733-24892785)
chr8 (229-281)||(35525493-35525545)
chr8 (229-281)||(36190666-36190718)
chr8 (235-275)||(38072117-38072157)
chr8 (822-888)||(584134-584201)
chr8 (235-274)||(41362846-41362885)
chr8 (229-275)||(13143659-13143705)
chr8 (235-281)||(30576040-30576086)
chr8 (318-371)||(4038984-4039037)
chr8 (318-371)||(29147340-29147393)
[»] chr2 (68 HSPs)
chr2 (228-514)||(792314-792600)
chr2 (228-514)||(21539669-21539955)
chr2 (232-514)||(14565331-14565614)
chr2 (228-514)||(29513978-29514263)
chr2 (228-514)||(33635248-33635534)
chr2 (232-514)||(35832328-35832610)
chr2 (228-506)||(38549609-38549887)
chr2 (228-514)||(29514433-29514718)
chr2 (228-514)||(43075662-43075947)
chr2 (235-508)||(28492439-28492712)
chr2 (228-514)||(4091922-4092209)
chr2 (230-514)||(5091498-5091784)
chr2 (228-514)||(8784307-8784594)
chr2 (232-514)||(28424190-28424471)
chr2 (228-514)||(10478087-10478376)
chr2 (240-515)||(44803823-44804097)
chr2 (235-469)||(4033678-4033912)
chr2 (283-514)||(43451472-43451703)
chr2 (235-514)||(18833867-18834149)
chr2 (344-514)||(10979197-10979367)
chr2 (257-514)||(38071408-38071658)
chr2 (230-513)||(15068660-15068933)
chr2 (283-510)||(13822729-13822959)
chr2 (230-342)||(15858740-15858852)
chr2 (246-364)||(22162249-22162368)
chr2 (264-514)||(9294603-9294854)
chr2 (420-514)||(15858647-15858741)
chr2 (228-311)||(10979104-10979186)
chr2 (827-945)||(41419624-41419748)
chr2 (230-436)||(26998234-26998441)
chr2 (433-514)||(38564675-38564756)
chr2 (824-953)||(38908667-38908800)
chr2 (230-483)||(32010019-32010273)
chr2 (358-480)||(7645219-7645341)
chr2 (245-371)||(20380055-20380182)
chr2 (229-402)||(38070912-38071085)
chr2 (317-515)||(3201331-3201530)
chr2 (319-514)||(29523999-29524194)
chr2 (235-371)||(32273593-32273730)
chr2 (229-371)||(44442049-44442190)
chr2 (822-910)||(14732339-14732428)
chr2 (317-510)||(35517128-35517321)
chr2 (235-402)||(9709436-9709603)
chr2 (378-514)||(8701668-8701803)
chr2 (319-480)||(9864710-9864870)
chr2 (826-915)||(22649068-22649158)
chr2 (229-311)||(25571941-25572025)
chr2 (317-480)||(19264104-19264268)
chr2 (319-480)||(12938249-12938410)
chr2 (229-275)||(19263996-19264042)
chr2 (378-480)||(25572111-25572213)
chr2 (235-275)||(6110387-6110427)
chr2 (229-281)||(29524252-29524304)
chr2 (229-281)||(33198846-33198898)
chr2 (229-281)||(45660259-45660311)
chr2 (320-479)||(33198624-33198783)
chr2 (380-483)||(35022967-35023069)
chr2 (380-514)||(40808675-40808811)
chr2 (235-311)||(40808892-40808970)
chr2 (836-882)||(41378216-41378263)
chr2 (375-479)||(4707484-4707585)
chr2 (235-281)||(5280692-5280738)
chr2 (319-417)||(30830651-30830749)
chr2 (317-514)||(45660370-45660569)
chr2 (282-431)||(921587-921735)
chr2 (318-402)||(8032738-8032823)
chr2 (238-275)||(41528193-41528230)
chr2 (379-480)||(43415468-43415569)
[»] chr7 (76 HSPs)
chr7 (228-514)||(35181103-35181389)
chr7 (228-514)||(43107822-43108109)
chr7 (231-514)||(23106366-23106650)
chr7 (235-514)||(47383324-47383603)
chr7 (230-514)||(3157349-3157633)
chr7 (230-513)||(19932973-19933256)
chr7 (230-514)||(41889084-41889368)
chr7 (228-514)||(42617582-42617869)
chr7 (228-514)||(21654038-21654324)
chr7 (228-512)||(48879299-48879583)
chr7 (228-515)||(44600357-44600644)
chr7 (228-506)||(41815618-41815896)
chr7 (240-512)||(40583068-40583341)
chr7 (228-512)||(45598815-45599102)
chr7 (247-512)||(22111248-22111514)
chr7 (235-513)||(32491025-32491302)
chr7 (235-514)||(40560300-40560579)
chr7 (228-486)||(36576329-36576585)
chr7 (228-482)||(34808130-34808384)
chr7 (240-514)||(23731483-23731759)
chr7 (230-514)||(18206236-18206509)
chr7 (230-474)||(19964151-19964395)
chr7 (230-514)||(48937807-48938088)
chr7 (228-513)||(41890162-41890463)
chr7 (228-514)||(9818392-9818665)
chr7 (228-514)||(10720317-10720590)
chr7 (228-514)||(7989224-7989493)
chr7 (230-404)||(48942942-48943114)
chr7 (291-515)||(33153013-33153237)
chr7 (279-514)||(35084017-35084253)
chr7 (228-509)||(30082275-30082543)
chr7 (245-514)||(29235986-29236242)
chr7 (236-371)||(39348708-39348843)
chr7 (235-371)||(39337445-39337584)
chr7 (317-504)||(28608373-28608560)
chr7 (826-953)||(46691848-46691983)
chr7 (321-514)||(40593822-40594015)
chr7 (228-512)||(18800686-18800966)
chr7 (822-914)||(30655597-30655691)
chr7 (828-945)||(36615808-36615926)
chr7 (317-514)||(25737585-25737782)
chr7 (245-371)||(31769063-31769189)
chr7 (238-440)||(35888001-35888203)
chr7 (229-417)||(38260231-38260421)
chr7 (317-514)||(35923257-35923453)
chr7 (823-945)||(1039063-1039190)
chr7 (317-480)||(4910627-4910788)
chr7 (317-501)||(45485960-45486144)
chr7 (304-448)||(48339245-48339389)
chr7 (235-399)||(22369148-22369313)
chr7 (826-941)||(31424775-31424896)
chr7 (832-945)||(49035862-49035982)
chr7 (823-888)||(42598052-42598118)
chr7 (317-514)||(18102535-18102732)
chr7 (319-480)||(47779611-47779772)
chr7 (317-514)||(25944581-25944779)
chr7 (235-402)||(39170457-39170624)
chr7 (829-945)||(41702871-41702992)
chr7 (317-514)||(46760215-46760412)
chr7 (391-515)||(2633295-2633418)
chr7 (317-480)||(6191050-6191213)
chr7 (830-888)||(22197738-22197797)
chr7 (830-888)||(22240024-22240083)
chr7 (319-480)||(19912761-19912922)
chr7 (230-275)||(25944474-25944519)
chr7 (358-483)||(29713235-29713360)
chr7 (831-945)||(33320711-33320825)
chr7 (235-276)||(47557932-47557973)
chr7 (235-275)||(18102463-18102503)
chr7 (235-275)||(24151777-24151817)
chr7 (229-281)||(47778669-47778721)
chr7 (830-888)||(19471096-19471155)
chr7 (375-417)||(15995782-15995824)
chr7 (380-501)||(16917539-16917661)
chr7 (823-876)||(32679023-32679077)
chr7 (294-395)||(28843552-28843653)
[»] chr4 (83 HSPs)
chr4 (228-514)||(39969914-39970200)
chr4 (228-514)||(29180337-29180623)
chr4 (228-514)||(30776409-30776695)
chr4 (228-514)||(53677404-53677690)
chr4 (230-513)||(3043093-3043376)
chr4 (228-514)||(30777396-30777683)
chr4 (228-514)||(10591428-10591713)
chr4 (228-514)||(43980407-43980693)
chr4 (228-514)||(50768354-50768640)
chr4 (228-504)||(32012261-32012538)
chr4 (230-508)||(37788362-37788640)
chr4 (228-506)||(49901935-49902214)
chr4 (228-510)||(9798004-9798286)
chr4 (228-514)||(55937628-55937914)
chr4 (228-514)||(29899624-29899910)
chr4 (230-488)||(38940780-38941038)
chr4 (228-514)||(38187653-38187937)
chr4 (246-514)||(51495079-51495343)
chr4 (228-506)||(1619938-1620217)
chr4 (281-513)||(47807157-47807388)
chr4 (228-484)||(52712972-52713220)
chr4 (230-506)||(27750278-27750557)
chr4 (235-514)||(30011878-30012157)
chr4 (228-514)||(5222217-5222509)
chr4 (384-513)||(28681724-28681853)
chr4 (262-398)||(5234043-5234179)
chr4 (229-431)||(40553684-40553886)
chr4 (229-431)||(8013124-8013327)
chr4 (827-913)||(16572110-16572198)
chr4 (229-402)||(23978179-23978353)
chr4 (826-913)||(15186984-15187072)
chr4 (229-436)||(37911798-37912006)
chr4 (826-944)||(47571574-47571694)
chr4 (301-474)||(17799126-17799299)
chr4 (317-514)||(47867882-47868079)
chr4 (230-370)||(8178335-8178475)
chr4 (319-480)||(5483264-5483425)
chr4 (378-514)||(8683258-8683394)
chr4 (230-282)||(47806809-47806861)
chr4 (317-514)||(4058718-4058912)
chr4 (246-348)||(17236342-17236446)
chr4 (229-501)||(28142586-28142860)
chr4 (235-365)||(40411021-40411152)
chr4 (230-431)||(5841814-5842016)
chr4 (229-281)||(16605040-16605092)
chr4 (229-402)||(28318481-28318655)
chr4 (318-402)||(32410332-32410416)
chr4 (378-474)||(35310734-35310830)
chr4 (378-514)||(42915594-42915730)
chr4 (826-888)||(25641272-25641335)
chr4 (317-480)||(29203509-29203672)
chr4 (826-941)||(32183288-32183410)
chr4 (235-370)||(47516287-47516423)
chr4 (317-513)||(20281594-20281787)
chr4 (317-514)||(28668953-28669149)
chr4 (317-514)||(39078160-39078356)
chr4 (378-514)||(48793582-48793716)
chr4 (229-281)||(17186987-17187039)
chr4 (235-402)||(46070586-46070753)
chr4 (229-346)||(53848381-53848499)
chr4 (463-514)||(51495372-51495422)
chr4 (318-480)||(5064641-5064803)
chr4 (395-473)||(17236262-17236340)
chr4 (319-417)||(25297271-25297369)
chr4 (229-275)||(35310954-35311000)
chr4 (235-281)||(35529572-35529618)
chr4 (282-352)||(38140826-38140896)
chr4 (321-514)||(2229254-2229447)
chr4 (828-888)||(16662312-16662373)
chr4 (229-274)||(55580562-55580607)
chr4 (317-417)||(1585396-1585496)
chr4 (235-275)||(2229179-2229219)
chr4 (235-275)||(14332691-14332731)
chr4 (235-275)||(26916257-26916297)
chr4 (229-281)||(39078052-39078104)
chr4 (235-275)||(42915430-42915470)
chr4 (229-281)||(48793831-48793883)
chr4 (235-363)||(49080175-49080306)
chr4 (317-368)||(7652121-7652172)
chr4 (235-281)||(4058615-4058661)
chr4 (828-858)||(45511407-45511437)
chr4 (238-275)||(4512954-4512991)
chr4 (379-424)||(8018445-8018490)
[»] chr3 (87 HSPs)
chr3 (230-514)||(55400653-55400937)
chr3 (228-514)||(26641033-26641319)
chr3 (228-514)||(21654157-21654444)
chr3 (228-505)||(31126125-31126402)
chr3 (230-512)||(46580451-46580732)
chr3 (228-514)||(53020095-53020382)
chr3 (228-514)||(51426530-51426818)
chr3 (238-499)||(28793084-28793346)
chr3 (228-514)||(32322160-32322446)
chr3 (231-514)||(37324004-37324292)
chr3 (228-502)||(1335023-1335297)
chr3 (246-514)||(46295997-46296266)
chr3 (238-505)||(43575881-43576147)
chr3 (235-514)||(16739086-16739355)
chr3 (228-467)||(45781310-45781549)
chr3 (235-512)||(51255108-51255383)
chr3 (282-513)||(49068018-49068249)
chr3 (228-431)||(23513480-23513683)
chr3 (228-510)||(46819962-46820229)
chr3 (283-514)||(52252004-52252232)
chr3 (333-511)||(45347637-45347815)
chr3 (235-514)||(36188927-36189206)
chr3 (341-510)||(34022625-34022794)
chr3 (232-381)||(13541194-13541343)
chr3 (242-417)||(52172028-52172204)
chr3 (240-512)||(51309348-51309611)
chr3 (828-956)||(28934741-28934873)
chr3 (826-953)||(43073049-43073180)
chr3 (229-417)||(21214155-21214344)
chr3 (229-417)||(23209295-23209484)
chr3 (228-311)||(34022534-34022617)
chr3 (433-514)||(13541351-13541432)
chr3 (229-371)||(22456069-22456212)
chr3 (230-371)||(22479115-22479257)
chr3 (822-953)||(8431417-8431551)
chr3 (428-514)||(23514554-23514641)
chr3 (350-493)||(30612213-30612356)
chr3 (229-401)||(38401294-38401467)
chr3 (230-402)||(10251926-10252099)
chr3 (827-945)||(44656229-44656353)
chr3 (245-514)||(7886535-7886806)
chr3 (283-475)||(34105500-34105697)
chr3 (235-371)||(2994479-2994616)
chr3 (235-402)||(34194808-34194976)
chr3 (826-951)||(9358752-9358883)
chr3 (230-480)||(10114827-10115077)
chr3 (317-514)||(37042335-37042532)
chr3 (319-483)||(26724940-26725104)
chr3 (230-282)||(49067028-49067080)
chr3 (240-365)||(49583890-49584016)
chr3 (230-370)||(54725665-54725806)
chr3 (228-289)||(45347814-45347875)
chr3 (831-951)||(47820897-47821026)
chr3 (822-914)||(10454320-10454417)
chr3 (235-431)||(30454726-30454923)
chr3 (826-945)||(31525370-31525492)
chr3 (317-480)||(50650989-50651152)
chr3 (826-888)||(52076131-52076194)
chr3 (318-480)||(8096970-8097132)
chr3 (305-395)||(46303534-46303624)
chr3 (235-371)||(47444034-47444174)
chr3 (317-480)||(35963161-35963324)
chr3 (317-442)||(20847259-20847383)
chr3 (318-371)||(25242239-25242292)
chr3 (228-273)||(33974738-33974783)
chr3 (256-362)||(48291763-48291870)
chr3 (828-945)||(20701153-20701275)
chr3 (826-945)||(42881886-42882010)
chr3 (317-512)||(47864200-47864395)
chr3 (317-515)||(54464812-54465010)
chr3 (229-275)||(2927189-2927235)
chr3 (229-275)||(14752385-14752431)
chr3 (458-508)||(45782321-45782371)
chr3 (282-402)||(10014238-10014357)
chr3 (235-275)||(11054454-11054494)
chr3 (824-941)||(28956957-28957079)
chr3 (230-281)||(37074860-37074911)
chr3 (230-281)||(46711830-46711881)
chr3 (319-417)||(6752681-6752779)
chr3 (375-481)||(31292672-31292778)
chr3 (235-273)||(36546480-36546518)
chr3 (235-273)||(36561797-36561835)
chr3 (386-436)||(46557166-46557216)
chr3 (317-402)||(6438092-6438177)
chr3 (317-402)||(34722635-34722720)
chr3 (317-370)||(50730118-50730171)
chr3 (317-370)||(50782683-50782736)
[»] chr6 (35 HSPs)
chr6 (228-514)||(10227824-10228110)
chr6 (231-514)||(17721768-17722051)
chr6 (230-510)||(12278620-12278900)
chr6 (234-514)||(374017-374297)
chr6 (235-514)||(30949054-30949333)
chr6 (228-510)||(30766358-30766640)
chr6 (238-473)||(17598215-17598450)
chr6 (230-514)||(31887079-31887365)
chr6 (228-456)||(33756168-33756396)
chr6 (390-514)||(5121415-5121539)
chr6 (230-504)||(32882660-32882925)
chr6 (299-504)||(21963941-21964145)
chr6 (250-371)||(3888362-3888484)
chr6 (229-402)||(4031901-4032075)
chr6 (230-370)||(5300696-5300836)
chr6 (319-514)||(7274834-7275029)
chr6 (235-402)||(4987863-4988031)
chr6 (468-514)||(17599464-17599510)
chr6 (282-402)||(16524349-16524467)
chr6 (826-945)||(33112718-33112843)
chr6 (317-514)||(35129013-35129211)
chr6 (826-882)||(6575797-6575854)
chr6 (321-514)||(21542427-21542620)
chr6 (235-275)||(3095908-3095948)
chr6 (379-431)||(7764089-7764141)
chr6 (830-952)||(10246909-10247035)
chr6 (823-945)||(11546773-11546899)
chr6 (826-941)||(15859106-15859230)
chr6 (235-275)||(21542352-21542392)
chr6 (317-512)||(3095681-3095875)
chr6 (229-275)||(1130433-1130479)
chr6 (229-311)||(5822182-5822266)
chr6 (229-411)||(5881814-5881997)
chr6 (319-364)||(16655200-16655245)
chr6 (323-480)||(17751737-17751894)
[»] scaffold0495 (1 HSPs)
scaffold0495 (228-514)||(4543-4828)
[»] chr5 (61 HSPs)
chr5 (228-514)||(8145972-8146258)
chr5 (228-514)||(35462678-35462963)
chr5 (228-512)||(13146643-13146927)
chr5 (230-506)||(20914775-20915051)
chr5 (228-512)||(31690581-31690865)
chr5 (246-527)||(31316746-31317028)
chr5 (238-514)||(8541523-8541799)
chr5 (228-515)||(12638804-12639089)
chr5 (230-514)||(25962407-25962695)
chr5 (228-514)||(42364953-42365235)
chr5 (228-515)||(16286041-16286328)
chr5 (236-515)||(24432358-24432637)
chr5 (228-514)||(30086505-30086793)
chr5 (230-490)||(37066206-37066466)
chr5 (230-513)||(24439488-24439771)
chr5 (238-512)||(8143858-8144132)
chr5 (245-418)||(17825253-17825425)
chr5 (283-512)||(2002096-2002323)
chr5 (228-441)||(20452468-20452668)
chr5 (401-514)||(36413895-36414008)
chr5 (229-365)||(28906984-28907122)
chr5 (229-365)||(28943379-28943517)
chr5 (317-514)||(42273654-42273847)
chr5 (250-371)||(3463917-3464040)
chr5 (229-478)||(32079421-32079670)
chr5 (317-516)||(43589919-43590118)
chr5 (229-287)||(32433570-32433628)
chr5 (250-371)||(8959577-8959699)
chr5 (319-514)||(20644021-20644217)
chr5 (831-945)||(23172981-23173100)
chr5 (375-515)||(30893209-30893348)
chr5 (317-512)||(11261846-11262040)
chr5 (829-914)||(22887251-22887337)
chr5 (319-510)||(25840871-25841062)
chr5 (229-371)||(16153447-16153590)
chr5 (250-402)||(10153999-10154152)
chr5 (317-479)||(34425336-34425497)
chr5 (828-956)||(819134-819266)
chr5 (831-913)||(9931804-9931893)
chr5 (829-953)||(25539817-25539947)
chr5 (229-346)||(8506353-8506471)
chr5 (319-431)||(42104290-42104402)
chr5 (250-346)||(1144624-1144720)
chr5 (229-311)||(42273546-42273629)
chr5 (229-275)||(9957634-9957680)
chr5 (230-275)||(8225361-8225406)
chr5 (319-480)||(17351395-17351556)
chr5 (230-275)||(39505450-39505495)
chr5 (822-914)||(10431098-10431193)
chr5 (229-281)||(12730199-12730251)
chr5 (826-916)||(42241592-42241684)
chr5 (235-311)||(25840766-25840843)
chr5 (229-275)||(20643911-20643957)
chr5 (229-275)||(34425227-34425273)
chr5 (235-281)||(38280748-38280794)
chr5 (317-399)||(38280852-38280934)
chr5 (319-372)||(445990-446043)
chr5 (828-888)||(3677795-3677855)
chr5 (285-418)||(8146696-8146829)
chr5 (317-354)||(15006413-15006450)
chr5 (426-483)||(20039216-20039273)
[»] scaffold0330 (1 HSPs)
scaffold0330 (250-371)||(3105-3227)
[»] scaffold0300 (1 HSPs)
scaffold0300 (317-514)||(532-729)
[»] scaffold0009 (2 HSPs)
scaffold0009 (319-514)||(157801-157995)
scaffold0009 (235-281)||(157697-157743)
[»] scaffold0132 (2 HSPs)
scaffold0132 (230-281)||(910-961)
scaffold0132 (230-281)||(8870-8921)
[»] scaffold0045 (1 HSPs)
scaffold0045 (235-275)||(77891-77931)
[»] scaffold0209 (1 HSPs)
scaffold0209 (822-888)||(12894-12961)
[»] scaffold0774 (1 HSPs)
scaffold0774 (320-402)||(3499-3581)


Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 228 - 513
Target Start/End: Original strand, 44875091 - 44875376
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  44875091 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 44875190  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44875191 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattctaaggagaa 44875290  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    |||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44875291 cacaaaaatttatacctcaaatcactaagtgttagttttcttagtaagtgtgaattagtgttttttgcttataaattaggacggag 44875376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 23874075 - 23873789
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  23874075 tctcatattctttgtctcaaaatatacgcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 23873976  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  23873975 gcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaaggagaa 23873876  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23873875 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 23873789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 46949233 - 46949519
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  46949233 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 46949332  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  46949333 gcaaattgtattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaaggagaa 46949432  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46949433 cacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaattaggacggagg 46949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 229 - 514
Target Start/End: Original strand, 25990661 - 25990946
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatg 328  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  25990661 ctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatg 25990760  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaac 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||    
T  25990761 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatatttccatgaaacttattccaaggagaac 25990860  T
Q  429 acataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  25990861 acaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgtgatttaatgttttttgcttataaattaggacggagg 25990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 26907337 - 26907053
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| |||||||||||    
T  26907337 tctcattttctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttttttcaaacaaattatctttttcaatgtaaaattaaat 26907238  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||| ||||||||    
T  26907237 gcaaattgcattcaatttattctcctttttattttctccataatttttaaccaa--cgaattatttttacatctttccatgaaacttattccaaggagaa 26907140  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26907139 cacaaaaaattatacctcaaatcattaagtattagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 26907053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 40219969 - 40220257
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  40219969 tctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaat-atcttttccaatgtaaaattaaat 40220067  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  40220068 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 40220167  T
Q  428 cacataaaattatacctcaaatc---attaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  40220168 cacaaaaaattatacctcaaatcactactaagtgttagttttcttaataagtgtgaattactgttttttgcttgtaaattaggacggagg 40220257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 28916763 - 28916478
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28916763 tctcatattttttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttttccaatataaaattaaat 28916664  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||    
T  28916663 gcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaagaagaa 28916564  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  28916563 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgtttttt-cttataaattagggcggagg 28916478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 40935861 - 40935575
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||    
T  40935861 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttcttcaaacaaatcatcttttccaatgtaaaattaaat 40935762  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  40935761 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 40935662  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  40935661 cacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaattaggatggagg 40935575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 228 - 515
Target Start/End: Complemental strand, 38942689 - 38942401
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  38942689 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcattttttccaatgtaaaattaaat 38942590  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  38942589 gcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaaggagaa 38942490  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagga 515  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||    
T  38942489 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgtttttttgcttataaaatagaacggagga 38942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 40960722 - 40960438
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||| |||||||||||    
T  40960722 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 40960623  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  40960622 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 40960523  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||| ||||| || |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40960522 cacaaaaaatcatgcctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaattaggacgga 40960438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 18036457 - 18036742
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  18036457 tctcattttctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaaagtaaaattaaat 18036555  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||    
T  18036556 gcaaattgcattcaatttattctcctttttattttcttcataatttttaaccaatgagaattatttttacatcttttcatgaaacttattccaagaagaa 18036655  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  18036656 cacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtatgaattaatgttttttacttataaattaggacggagg 18036742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 28017570 - 28017854
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28017570 tctcatattctttatctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 28017669  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||      
T  28017670 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgataattatttttacatctttccatgaaacttatttcaaggag-- 28017767  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  28017768 tacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaattaggacagagg 28017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 18852135 - 18852421
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||||||||||||||||| || ||||| ||| |||||||||||    
T  18852135 tctcatattctttgtctcaaaatataagcataaaagacctacttttatgtcattattatgttttttcaaacaaattattttttccaatgtaaaattaaat 18852234  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  18852235 gcaaattgcattcaatttgttcccctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaa 18852334  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18852335 cacaaaaaattatacctcaaatcactaactgttagctttcttaataagtgtgaattagtgttttttgcttataaattagaacggagg 18852421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 29488660 - 29488946
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||    
T  29488660 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaataatattttccaatgtaaaattaaat 29488759  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||| |||||| ||||||||    
T  29488760 gcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattttttttatatcttttcatgaaacttattccaaggagaa 29488859  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  29488860 cacaacaaattatacctcaaatcactaagtgttcgttttcttaataagtgtgaattagtgtttttgacttataaattaggacggagg 29488946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 35941753 - 35942039
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  35941753 tctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 35941852  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||| |||||  |||||||     
T  35941853 acaaattgcattcaatttgttctcttttttattttctccataatttttaatcaatgaaaattattattacatctttccataaaacttatttcaaggagag 35941952  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35941953 cacaaaaaattatacctcaaataattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 35942039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 43656284 - 43656001
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  43656284 tctcatattctttgtctcaaaatataaggaaaaaa-atcaacttttatgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 43656186  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  43656185 gcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattatttttacatctttccatgaaacttatttcaaggagaa 43656086  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  43656085 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttttaaattaggacgga 43656001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 49924331 - 49924617
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  49924331 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 49924430  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| || |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||    
T  49924431 gcaagttacatttaatttgttctcctttttattttcttcatgatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaagaagaa 49924530  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  49924531 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttacttataaattaggacggagg 49924617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 228 - 522
Target Start/End: Original strand, 15285716 - 15286009
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  15285716 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgccattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 15285815  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  ||||||||    
T  15285816 gcaaattgcattcaatttgttct-cttttttttttctccataatttttaaccaatgagaattatttttacatatttccatgaaacttatttcaaggagaa 15285914  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga-ggagtagtta 522  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||    
T  15285915 cacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattaatgtttttt-cttataaattagaacggatggagtagtta 15286009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 228 - 520
Target Start/End: Original strand, 9127955 - 9128248
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  9127955 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatctttttcaatgtaaaattaaat 9128054  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    | |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  ||||||||    
T  9128055 gtaaattgcattcaatttatttacctttttattttctccataatttttaaccaatgagaattatttttacatctttccattaaatttatttcaaggagaa 9128154  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga-ggagtagt 520  Q
    |||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||    
T  9128155 cacaaaaaagtatacctcaaatcactaagtgttaattttcttaataagtgtgaattaatattttttacttataaattaggacggatggagtagt 9128248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 31970556 - 31970273
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||| |||||||||||| |||||||| ||||||||||| |||| |||||| |||||||||||||||||||||| ||| |||||||||||    
T  31970556 tctcattttctttgtatcaaaatataag-aaaaaagatcaacttttatgttatttttatgtcttttcaaacaaatcatcttttccaatgtaaaattaaat 31970458  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  31970457 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 31970358  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||| ||||| ||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||    
T  31970357 cacaaaaaatcatacctcaaatcactaagtgttaatcttcttaataagtgtgaattagtattttttgcttataaattaggacgga 31970273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 238 - 514
Target Start/End: Complemental strand, 39026484 - 39026207
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||| ||||||||||||||| |||||    
T  39026484 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaataaatcatattttccaatgtaaaattaaatgcaagttgca 39026385  T
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||  ||| |||||||| |||||    
T  39026384 tttaatttattctcctttttattttctccataatttttaaccaataagaattatttttacatctttccatgaaacttatttcaagaagaacacaaaaaat 39026285  T
Q  438 tatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtt-ttttgcttataaattaggacggagg 514  Q
    ||||| ||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  39026284 tatacatcaaatcaccaagtgttagttttcttaataaatgtgaattagtgtttttttgcttataaattaggacggagg 39026207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 228 - 515
Target Start/End: Original strand, 26479651 - 26479939
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||| |||    
T  26479651 tctcatattctttgtctcaaaatataaacaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcatcttttccaatgtaaaattcaat 26479750  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    | |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||    
T  26479751 gaaaattgcattcaatatgttctcctttttattttctctatagtttttaaccaatgagaattatttttacatttttccataaaacttattttaaggagaa 26479850  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagga 515  Q
    |||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  26479851 cacaaaaaattatacctcaaatcactaaatgttagtttttttaataagtgtgaattattgtttttttgcttataaattagaacggagga 26479939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 235 - 514
Target Start/End: Complemental strand, 45358117 - 45357837
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||| ||  ||    
T  45358117 ttctttgtctcaaaatataagcaaaaaaaaccaacttttatgctatttttatgttatttcaaacaaatcatcttttccaatgtaaaattaaatacatgtt 45358018  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || | ||||||| ||    
T  45358017 gcatttaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatatttccatgaaacttattccaaag-gaacacaaaa 45357919  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta--gtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||  || |||||||||||||||||||||||||||    
T  45357918 aattatacctcaaatcactaagtgttagttgtcttaataagtgtgaattaatgttttttttgcttataaattaggacggagg 45357837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 232 - 515
Target Start/End: Original strand, 35189116 - 35189401
Alignment:
Q  232 atattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaatgca 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||  ||| ||||||||| | ||    
T  35189116 atattctttgtctcaaaatataagcaaaaaagaccaacttttatggtattattatgtttttttcaaacaaataatctttttcaatgtaaaattaactaca 35189215  T
Q  331 aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacac 430  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||  ||| ||||||     
T  35189216 aattgcattcaatgtgttctcctctttattttctccataatttttaaccaatgaaaattatttttacatatttccatgaaacttatttcaagaagaacat 35189315  T
Q  431 ataaaattatacctcaaatcattaagtgttag-ttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    | ||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35189316 aaaaaattatacctcaaattactaagtgttagtttttcttaataaatgtgaattagtgttttttgcttataaattaggacggagga 35189401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 248 - 515
Target Start/End: Original strand, 15311110 - 15311376
Alignment:
Q  248 aatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgt 347  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||||||||||||||  ||| |||||||||||    
T  15311110 aatataaacaaaaaagatcaacttttatgctgttattatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgcag-ttgtattcaatttgt 15311208  T
Q  348 tctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaa 447  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  15311209 tctcctttttattttctctataatttttaaccaatgagaattatttttatttctttccatgaaacttattccaaggagaatacaaaaaattatacctcaa 15311308  T
Q  448 atcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  15311309 atcattaagtattagttttcttaataagtgtgaattagtgttttatgcttataaattatgacggagga 15311376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 240 - 514
Target Start/End: Complemental strand, 18913582 - 18913306
Alignment:
Q  240 tgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcatt 339  Q
    ||||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  18913582 tgtctcaaaatataagcaaaaaataccaattttgatgctatctttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatt 18913483  T
Q  340 caatttgttctcctttttattttctccataatttttaaccaa-tgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaatt 438  Q
     |||||||||| |||||||| |||||||| ||||||||| || |||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||    
T  18913482 taatttgttcttctttttatgttctccatgatttttaactaattgagaattatttttacatcttttcatgaaacttattccgaggagaacacaaaaaatt 18913383  T
Q  439 atacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18913382 atacctcaaatcactaaatgttagttttcttaataagtgtgaattagtgtttttttgcttataaattaggacggagg 18913306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 6848550 - 6848272
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaatg 328  Q
    ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  6848550 tcatattctttgtctcaaaatataagcaaaaaagact---ttttatgctattattatgtttttttctaacaaatcatcttttccaatctaaaattaaatg 6848454  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaac 428  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||  |||||||||    
T  6848453 caaattgcattcaatgcgttatcctttttattttctccataatttttaaccaatgagaattattttta---ctttccatgaaacttatttcaaggagaac 6848357  T
Q  429 acataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||||| ||||||||||||| ||| | |||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||    
T  6848356 acaaaaaatcatacctcaaatcactaattattagtttt-ttaataaatgtgaattagtgtttttttcttataaattaggatggagg 6848272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 238 - 512
Target Start/End: Original strand, 4529109 - 4529371
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||||||||    
T  4529109 tttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcattttttccaatgtaaaattaaatgcaaattgca 4529208  T
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    ||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||             
T  4529209 ttcaatttgttcttctttttgttttctccataatttttaacagatgagaattatttttacatctttccatgaaacttattccaaggagaac--------- 4529299  T
Q  438 tatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
      |||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||    
T  4529300 --tacctcaaatcactaagtgttagttttcttaataagtatgaattagtgtttttt-cttataaattagaacgga 4529371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 246 - 502
Target Start/End: Original strand, 47996884 - 47997140
Alignment:
Q  246 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaattt 345  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||    
T  47996884 aaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatacaaattgtattcaattt 47996983  T
Q  346 gttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctc 445  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||| ||| |  ||| | |||||| ||||| |||||||    
T  47996984 gttctcctttttattttctccataatttttaactaatgagaattatttttatatctttccaaaaaacttacttcaagaaaaacacaaaaaataatacctc 47997083  T
Q  446 aaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 502  Q
    |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  47997084 aaatcactaaatgttagttttcttaataagtgtgaattactgttttttgcttataaa 47997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 52782792 - 52782609
Alignment:
Q  8 gtatcccctcatgaagtgcatttacaggaacataaggggaattggcaacatggaaacacaacttcacctgaataagataattcaaactcataagcctagt 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52782792 gtatcccctcatgaagtgcatttactggaacataaggggaattggcaacatggaaacacaacttcacctgaataagataattcaaactcataagcctagt 52782693  T
Q  108 tttctgtttgtggctgagcctatgatagcttttacctccattcctatatggtattggaaaagacacaaaccggagatacatatgta 193  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  52782692 tttctgtttttggctgagcctatgatagattttacctccattcctatatggtattggaaaagacacaaactg--gatacatatgta 52782609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 516 - 811
Target Start/End: Complemental strand, 52782611 - 52782336
Alignment:
Q  516 gtagttaataataggcatctttctctgccaaatatctggtgtatatggaactcttcttacaaagttactatacttctcaatcatactcaatgcattattt 615  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||    
T  52782611 gtagttaataataggcatctttctctgcctaatatctggtgtatatggaactcttcttacaaagttactatacttctcaat----------gcattattt 52782522  T
Q  616 tttcctgtacatatgatgattctagnnnnnnnnnnnnnnnnnnnngtggtttatgcttctaccttctacactcagagaagggatttgtggtcagctataa 715  Q
    ||||||||||||||||||||||||                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52782521 tttcctgtacatatgatgattcta------ttattttttttggctgtggtttatgcttctaccttctacactcagagaagggatttgtggtcagctataa 52782428  T
Q  716 catctatgatgtccaaccatcggggaccctggttactggttggggatttcaacggcatcattggggctcatgaaaagattggagggaagctacctc 811  Q
    |||||||||| |||||||||| |||||||    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  52782427 catctatgatttccaaccatcagggaccc----tactggttggggatttcaatgccatccttggggctcatgaaaagattggagggaagctacctc 52782336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 228 - 487
Target Start/End: Original strand, 35884134 - 35884382
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||           |||||||||||    
T  35884134 tctcatattctttatcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcat-----------taaaattaaat 35884222  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||  ||  ||||    
T  35884223 gcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatttttacatctttccataaaatttatttcaaaaagaa 35884322  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg 487  Q
    |||| ||||||||||||||||| | |||| ||||||||||||||||| |||||| |||||    
T  35884323 cacaaaaaattatacctcaaattactaagagttagttttcttaataaatgtgaactagtg 35884382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 238 - 514
Target Start/End: Original strand, 36383850 - 36384126
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc-aaacaaatcatcttttctaatctaaaattaaatgcaaattgc 336  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||| | ||  ||||||||||||||||||||    
T  36383850 tttgtcacaaaatataagcaaaaaagatcaacttttatgttattattatgttttttctaaaaaaatcatctttccaaag-taaaattaaatgcaaattgc 36383948  T
Q  337 attcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaa 436  Q
    |||||||||||| ||||||||||||||||||||||  ||| ||||||| |||| |||||| |||||||||||||| |||||| ||  | |||||| ||||    
T  36383949 attcaatttgttttcctttttattttctccataataattagccaatgataattgtttttatatctttccatgaaatttattccaaaaataacacaaaaaa 36384048  T
Q  437 ttatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| ||||||| || | || |||  |||||||||||||||||| | || ||||||||||||||||| |||||||||    
T  36384049 ttatatctcaaattataatgttttaactttcttaataagtgtgaaattgtattttttgcttataaattgggacggagg 36384126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 235 - 397
Target Start/End: Complemental strand, 44056540 - 44056377
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagac-caacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaat 333  Q
    ||||||||| |||||||||||||||||| |  ||| |||  |||||||| |||||||||||||| ||  ||||||||  |   ||||||||||||||| |    
T  44056540 ttctttgtcccaaaatataagcaaaaaaaaatcaattttcctgctattaatatgttttttcaaaaaacccatctttttcagagtaaaattaaatgcaatt 44056441  T
Q  334 tgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttac 397  Q
    ||||||| ||||  ||||||| ||||||||||||||||  |||||||||||||||| |||||||    
T  44056440 tgcattccattttctctccttcttattttctccataatcattaaccaatgagaattgtttttac 44056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 827 - 953
Target Start/End: Complemental strand, 31834019 - 31833893
Alignment:
Q  827 ggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccatat-acaccgg 924  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    |||| |||||| |||| ||||||||||||| || |||||||    
T  31834019 ggcaaaatattattaaccaacaaatccgtgcaagatgcactaacaagctcgggtg----aaaaaaaatacaagggaaaatcggttgccacataacaccgg 31833924  T
Q  925 ctcg-acaaaaacccctt-aaaaccacccca 953  Q
    |||| ||||||||||||| ||||||||||||    
T  31833923 ctcgaacaaaaaccccttaaaaaccacccca 31833893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 229 - 404
Target Start/End: Original strand, 41063657 - 41063833
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| || |||||| |||| |||||| |||||||||||||||||||  | ||  ||||| || ||||||| |||| |||||||  ||   |||||||||    
T  41063657 ctcattttatttgtcccaaattataagaaaaaaagaccaacttttatcatttttaattatattgtttcaaa-aaattatctttttcaaagaaaaattaaa 41063755  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 404  Q
    |||||| ||||||||||||||||||  ||| |||||||| ||||    |||||||||| |||||||||||||||||||    
T  41063756 tgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttc 41063833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 16661431 - 16661569
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| || |||| ||||||||||||||||||||| ||||  ||||  |||||||||| ||||| |||| |||||||  |||  |||||||||    
T  16661431 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 16661529  T
Q  327 tgcaaattgcattcaatttgttctccttttt-attttctc 365  Q
    |||||| |||||||||||||||||| ||||| ||||||||    
T  16661530 tgcaaagtgcattcaatttgttctcttttttcattttctc 16661569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 319 - 514
Target Start/End: Complemental strand, 24728781 - 24728585
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| |||| |||||  ||||  ||||||||| ||||||||   |  ||||||| |||| |||||||||||| |||||||| ||||||    
T  24728781 aaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 24728682  T
Q  419 taaggagaacacataaaat-tatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     || || |||||| ||||  ||| |  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| ||||||||||||    
T  24728681 gaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggagg 24728585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 826 - 916
Target Start/End: Complemental strand, 19472929 - 19472837
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggag-aaaaataaataccaggggaaatcggttgccata 916  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| | |  |||||||||| |||||||||    
T  19472929 cggcaaaatattattaaccaacaagcccgtgcaagacgcactaataagctcgggtggagaaaaaatacaaagaaggggaaatcagttgccata 19472837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 230 - 402
Target Start/End: Original strand, 7397624 - 7397796
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||| |||| |||||||||||||| | |||||||||  ||||  |||| ||||||||||| |||| |||||||| ||   ||||||||||    
T  7397624 tcattttctttgtcccaaattataagcaaaaaagcctaacttttatcatatttaatta-gttttttcaaa-aaattatcttttccaaaggaaaattaaat 7397721  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||| ||||||||||||| |||  |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  7397722 gcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatctt 7397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 36037380 - 36037435
Alignment:
Q  459 ttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  36037380 ttagttttcttaataagtgtgaatttgtgttttttgcttataaattgggacggagg 36037435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 230 - 417
Target Start/End: Complemental strand, 51339142 - 51338953
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||| |||| |||||| ||||||||| |||||||||  ||||  ||||| |||||||||| ||||||||||||| ||    |||||||||    
T  51339142 tcattttctttgtcgcaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51339044  T
Q  328 gcaaattgcattcaatttgttctc-ctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||| ||||||| | | |||| || ||||  |||||||| |||| |  |||||||||| ||||  ||||||||||||| |||||| |||||    
T  51339043 gcaatttgcatttactatgttttctctttcaattttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatt 51338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 830 - 945
Target Start/End: Original strand, 8462976 - 8463096
Alignment:
Q  830 aaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggag-aaaaataaataccaggggaaatcggttgccatatacac--cggc 925  Q
    |||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||| ||||||| |||| |||| ||||||||||||| | | ||  ||||    
T  8462976 aaaatattattaaccaacaagctcgtgcaagaagcactaattagctcgggtggagaaaaaatacatacaagggaaaatcggttgccacaaaaacgtcggc 8463075  T
Q  926 tcg-acaaaaaccccttaaaa 945  Q
    ||| |||||||||||||||||    
T  8463076 tcgaacaaaaaccccttaaaa 8463096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 826 - 914
Target Start/End: Complemental strand, 12173083 - 12172995
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcca 914  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| ||||| | | || ||||||||||||||||||    
T  12173083 cggcaaaatattattaaccaacaagcccgtgcaagaagcactaataagcttgggtgga-aaaaaaacaaacaaggggaaatcggttgcca 12172995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 15912116 - 15912288
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||||||||  |||| |||||| ||||||   ||||||||||  ||||  |||||||| ||||||| ||||||| ||||| ||   |||||||||    
T  15912116 ctcatattctttgttccaaattataaggaaaaaaa--caacttttatcatatttaattatgttatttcaaa-aaatcattttttccaaagaaaaattaaa 15912212  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||||| ||||||||||||| ||||||||| ||||||||  ||||    || |||||| |||| ||||||||||||    
T  15912213 tgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatctt 15912288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 317 - 469
Target Start/End: Complemental strand, 3861849 - 3861699
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    ||||||||||||||||||  ||| ||||| |||||||||  ||||| | ||||||   || ||||||| |||| |||||||||||||| || ||| ||||    
T  3861849 taaaattaaatgcaaattatatttaattt-ttctcctttc-atttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaacttat 3861752  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttctt 469  Q
    ||||| || |||| | |||||||||| |||||| |||| || |||||||||||    
T  3861751 tctaaagaaaacataaaaaattatacttcaaattattatgttttagttttctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 371
Target Start/End: Complemental strand, 25185492 - 25185406
Alignment:
Q  284 tatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    |||||||||||||| |||| |||||||| ||   ||||||||||||||| |||||||||||||||||| |||| |||||||| |||||    
T  25185492 tatgttttttcaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataat 25185406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 15959796 - 15959601
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  15959796 taaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 15959697  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |  || || |||||| ||||||||||  |||||  ||| || |||||||||||||||| ||||| ||  | |||||| ||||||| || |||||||||    
T  15959696 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataaatgtgattt--ttttttttacttataatttgggacggagg 15959601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 431
Target Start/End: Complemental strand, 51840740 - 51840537
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||  ||| |||||| ||||||||| |||||||||  ||||  ||||| |||||||||| ||||||||||||| ||    |||||||||    
T  51840740 tcattttctttgtcgtaaattataagtaaaaaagactaacttttattatatttaattatattttttcaaa-aaatcatcttttccaaagagaaattaaat 51840642  T
Q  328 gcaaattgcattcaatttgttctc-ctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    |||| ||||||| | | |||| || ||||  |||||||| |||| |  |||||||||| ||||  ||||| ||||||| |||||| |||||| || || |    
T  51840641 gcaatttgcatttactatgttttctctttcaattttctctataactaataaccaatgaaaattgattttatatctttctatgaaacttattccaaagata 51840542  T
Q  427 acaca 431  Q
    |||||    
T  51840541 acaca 51840537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 13351686 - 13351770
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||| |||||||||| ||||||||||||||||||||||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 13351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 44148931 - 44148795
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||| |||||||||||| |||||||| |||||| || || |||||| |||| ||| |  |||||  ||| |  ||||||||| |||||||||    
T  44148931 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcgtaataagtg 44148832  T
Q  478 tgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||    |||||||||||||| ||||||||||||    
T  44148831 tgatttttgtttttttgcttataatttaggacggagg 44148795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 826 - 916
Target Start/End: Complemental strand, 38548806 - 38548712
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtgg-agaaaaataaata--ccaggggaaatcggttgccata 916  Q
    |||||||||||||||||||||||| |||||||| || ||||||| |||||||||||| | ||||| ||| |  | ||||||||||||||||||||    
T  38548806 cggcaaaatattattaaccaacaaacccgtgcaagacgcactaataagctcgggtgggaaaaaaaaaaacaagcaaggggaaatcggttgccata 38548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 280 - 371
Target Start/End: Complemental strand, 44510411 - 44510321
Alignment:
Q  280 ttattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    |||| ||||||||||||| |||| | |||||| ||   ||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  44510411 ttatcatgttttttcaaa-aaattaccttttccaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataat 44510321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 431
Target Start/End: Complemental strand, 5858617 - 5858413
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaa-gaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaa 325  Q
    ||||| |||||| || |||| ||||||||||||| ||| |||||||||  ||||  |||||||| ||||||| |||| |||||||  ||   ||||||||    
T  5858617 ctcattttctttatcccaaattataagcaaaaaaagacaaacttttatcatatttaattatgttgtttcaaa-aaattatctttttcaaaggaaaattaa 5858519  T
Q  326 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggag 425  Q
    ||||||| ||||||||||||| ||||  ||| |||||||| ||||    || ||||||| |||| |||||| ||||| | || ||| |||||  |||||     
T  5858518 atgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatttcaaggat 5858419  T
Q  426 aacaca 431  Q
    ||||||    
T  5858418 aacaca 5858413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 831 - 945
Target Start/End: Original strand, 42442015 - 42442135
Alignment:
Q  831 aaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtg--gagaaaaataaataccaggggaaatcggttgccat--atacaccggc 925  Q
    |||||||||||||||||||| |||||| ||| ||||||| |||||||||||   | ||||||| | || | |||||||||||||||||  | |||||| |    
T  42442015 aaatattattaaccaacaagtccgtgcaagaagcactaataagctcgggtgaaaaaaaaaatacaaacaacgggaaatcggttgccattaaaacaccgac 42442114  T
Q  926 tcg-acaaaaaccccttaaaa 945  Q
    ||| |||||||||||||||||    
T  42442115 tcgaacaaaaaccccttaaaa 42442135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 481
Target Start/End: Complemental strand, 52841599 - 52841437
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    ||||||| ||||||||||| ||| |||| ||| | ||| |||||| | |||| |  |||||||||| |||| |||| ||||||||| |||||| |||||     
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattt 52841500  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 481  Q
    |||||| || |||  ||| |||||  ||||  |||  || |||||||||||||||| ||||||    
T  52841499 taaggataagacaagaaactatactacaaactattgtgttttagttttcttaataaatgtgaa 52841437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 378 - 480
Target Start/End: Original strand, 52984999 - 52985101
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||| |||||||||||| || ||||| |||||| || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||    
T  52984999 ccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgtattagttttcttaataagtg 52985098  T
Q  478 tga 480  Q
    |||    
T  52985099 tga 52985101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 28120911 - 28120714
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| ||||||||   || ||||||| |||| |||||||||||| |||| ||| | ||    
T  28120911 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcat 28120812  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    | |||  | |||||| |||| |||||  || ||  |||  | |||||||||||||||| ||||| ||  | |||| | |||||||  |||||||||||    
T  28120811 tttaaaaaaaacacaaaaaactatactccacattcttatttcttagttttcttaataaatgtgacttttttttttcttcttataatctaggacggagg 28120714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 44149097 - 44149044
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  44149097 tctcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatt 44149044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 7468217 - 7468165
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  7468217 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatt 7468165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 431
Target Start/End: Complemental strand, 10558910 - 10558798
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||| ||||| |||| ||||| |||||  ||  ||||||||||||||   || ||||||| |||| |||||||||||| |||| ||||||||||    
T  10558910 aaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaaattattc 10558811  T
Q  419 taaggagaacaca 431  Q
     || || ||||||    
T  10558810 caaagaaaacaca 10558798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 826 - 913
Target Start/End: Complemental strand, 26990730 - 26990643
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcc 913  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||| ||||| ||||||| ||||| | |||| |||| |||||| |||||    
T  26990730 cggcaaaatattattaaccaataagcccgtgcaagaagcactaataagcttgggtgga-aaaaaaacatacaagggaaaatcgattgcc 26990643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 28017008 - 28016956
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  28017008 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatt 28016956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 829 - 945
Target Start/End: Original strand, 41955891 - 41956015
Alignment:
Q  829 caaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa----taaataccaggggaaatcggttgccata--tacac 921  Q
    |||||||||||||||||||||   ||||| |||| |||||| ||||| || ||||||||||     |||||| ||||||||||||||||||||   ||||    
T  41955891 caaaatattattaaccaacaaattcgtgcaagatacactaataagcttggatggagaaaaaaactaaaatacaaggggaaatcggttgccataataacac 41955990  T
Q  922 cggctcg-acaaaaaccccttaaaa 945  Q
    ||||||| ||||||| |||||||||    
T  41955991 cggctcgaacaaaaatcccttaaaa 41956015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 43667527 - 43667487
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  43667527 ttctttgtctcaaaatataagcaaaaaagacaaacttttat 43667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 822 - 945
Target Start/End: Complemental strand, 47029067 - 47028938
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaa----taaataccaggggaaatcggttgc--ca 914  Q
    |||||||| ||||||||  ||||||||||  |||||| || ||| ||| ||||||||||||| |||||    ||||||| ||||||||||||||||  ||    
T  47029067 gaaacggccaaatatta--aaccaacaagttcgtgcaagacgcattaataagctcgggtggaaaaaaaaacataaatacaaggggaaatcggttgccgca 47028970  T
Q  915 tatacaccggctcg-acaaaaaccccttaaaa 945  Q
     | ||||||||||| |||||||||||||||||    
T  47028969 aaaacaccggctcgaacaaaaaccccttaaaa 47028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 230 - 346
Target Start/End: Complemental strand, 35366447 - 35366330
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||  ||| ||||||||||||||| ||||||||||  ||||  |||||||| ||||||| |||| || ||||| ||   ||||||||||    
T  35366447 tcattttctttgtccaaaattataagcaaaaaagatcaacttttatcatatttaattatgttgtttcaaa-aaattatattttccaaagaaaaattaaat 35366349  T
Q  328 gcaaattgcattcaatttg 346  Q
     |||| |||||||||||||    
T  35366348 tcaaagtgcattcaatttg 35366330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 37735537 - 37735438
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| ||||||||||  |||| |||  ||||||||||||||   || ||||| | |||| ||||||| |||| |||||||| ||||||    
T  37735537 aaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccatgaaacttattc 37735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 836 - 914
Target Start/End: Complemental strand, 46757425 - 46757347
Alignment:
Q  836 ttattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcca 914  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||| |||||  ||||  ||||||||||| ||||||    
T  46757425 ttattaaccaacaagcccgtgcaagatgcactaataagctcaggtgga-aaaaaacaatataaggggaaatcgattgcca 46757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 6786734 - 6786780
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  6786734 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 6786780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 481
Target Start/End: Original strand, 42724101 - 42724263
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    ||||||||||||||||||||| |||||| ||||| | | ||||||| |||||    |||| ||| | |||| ||||||||||||  | ||||| | |||     
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttctcgtgaaactaattt 42724200  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 481  Q
     ||| |||||| |  ||| ||||| |||||| || | || |||||||||||| ||||||||||    
T  42724201 caagaagaacagaagaaactatacttcaaatgataatgttttagttttcttagtaagtgtgaa 42724263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 298931 - 298879
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| |||||||||||||||| |||||||||||||| || |||||| |||||    
T  298931 ctcattttctttgtctcaaaatgtaagcaaaaaagacaaagttttatcctatt 298879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 6785353 - 6785405
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||  ||||||||| |||||    
T  6785353 ctcattttctttgtcacaaaatataagcaaaaaagataaacttttatcctatt 6785405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 6787255 - 6787203
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| |||||| || ||||||||||||||||||||| ||||||||| |||||    
T  6787255 ctcattttctttatcccaaaatataagcaaaaaagacaaacttttatcctatt 6787203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 12449194 - 12449154
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  12449194 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 12449154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 826 - 858
Target Start/End: Complemental strand, 28447848 - 28447816
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgca 858  Q
    |||||||||||||||||||||||||||||||||    
T  28447848 cggcaaaatattattaaccaacaagcccgtgca 28447816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 32624233 - 32624193
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  32624233 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 32624193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 397
Target Start/End: Complemental strand, 34102216 - 34102049
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||| ||| ||||| ||||| |||||||||| |||||||||  ||||  |||||||| |||||||  |||||||||||  ||   |||||||||    
T  34102216 ctcattttctctgtatcaaattataaacaaaaaagacaaacttttatcatatttaattatgttatttcaaa--aatcatctttttcaaaggaaaattaaa 34102119  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttac 397  Q
    |||||| |||| |||||||| ||||  ||| | |||||| ||||    |||||||||| |||| |||||||    
T  34102118 tgcaaagtgca-tcaatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 39555813 - 39555773
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  39555813 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 39555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 480
Target Start/End: Complemental strand, 39555742 - 39555579
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| |||||||| |  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||||| || ||| || |    
T  39555742 taaaattaaatgcaaattacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 39555643  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    |  || || |||||| |||  |||||  |||||  ||| || ||| ||||||||||||||||||    
T  39555642 ttcaaagaaaacacaaaaacctatactccaaattcttatgttttaattttcttaataagtgtga 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 301 - 431
Target Start/End: Original strand, 13291778 - 13291908
Alignment:
Q  301 atcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatc 400  Q
    ||||||||||| |||   ||| ||||||||||||||| ||| |||| || || || ||||||||| |||| |  |||| ||||  |||| || || ||||    
T  13291778 atcatcttttccaatgagaaaataaatgcaaattgcactcattttggtcccccttatattttctcaataactaataacaaatgcaaattgttcttgcatc 13291877  T
Q  401 tttccatgaaaattattctaaggagaacaca 431  Q
    |||| |||||| |||||| ||||| ||||||    
T  13291878 tttctatgaaacttattccaaggataacaca 13291908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 15959904 - 15959858
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||| || ||||||    
T  15959904 ctcattttctttgtcccaaaatataagcaaaaaagacaaatttttat 15959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 822 - 851
Target Start/End: Original strand, 30465024 - 30465053
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagc 851  Q
    ||||||||||||||||||||||||||||||    
T  30465024 gaaacggcaaaatattattaaccaacaagc 30465053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 45840220 - 45840167
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||| || |||||    
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataat 45840167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 255; Significance: 1e-141; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 35259972 - 35260258
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  35259972 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 35260071  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  35260072 gcaaattccattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 35260171  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35260172 cacaaaaaatgatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 35260258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 27621045 - 27621331
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  27621045 tctcatattctttgtctcaatatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 27621144  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  27621145 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaagtagaa 27621244  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27621245 cacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 27621331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 228 - 522
Target Start/End: Original strand, 3099867 - 3100163
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  3099867 tctcattttctttgtttcaaaatataagcaaaaaagacaatcttttatgctattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 3099966  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||    
T  3099967 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaacgaga 3100066  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga-ggagtagtta 522  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  3100067 acacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaagacggagggagtagtta 3100163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 230 - 514
Target Start/End: Original strand, 27752503 - 27752787
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  27752503 tcattttctttgtctcaaaatataaacaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 27752602  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  27752603 aagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaaca 27752702  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27752703 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaatcaggacggagg 27752787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 11043972 - 11044258
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||    
T  11043972 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaataaatcatattttccaatgtaaaattaaat 11044071  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  11044072 gcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgagaattatttttacatctttacatgaaacttattccaaggagaa 11044171  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11044172 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattagaacggagg 11044258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 37597985 - 37598270
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  37597985 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttgttattatgttttttcaaacaaatcattttttccaatgtaaaattaaat 37598084  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||    
T  37598085 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatta-ttttacatctttccatgaaacttatttcaaggagaa 37598183  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37598184 cacaaaaaattatacctcaaatcagtaagtgttagttttcttaataaccgtgaattagtgttttttgcttataaattaggacggagg 37598270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 44411456 - 44411171
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaa-gaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||    
T  44411456 tctcatattctttttctcaaaatataagcaaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatctttttcaatgtaaaattaaa 44411357  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  44411356 tgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggaga 44411257  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    | ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44411256 atacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 44411171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 228 - 510
Target Start/End: Original strand, 35344281 - 35344565
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttct-aatctaaaattaaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||    
T  35344281 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcattttttttcaatgtaaaattaaa 35344380  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  35344381 tgcaaattgcattcaatgtattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggaga 35344480  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacg 510  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35344481 acacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagagtttttttgcttataaattaggacg 35344565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 228 - 506
Target Start/End: Complemental strand, 24612726 - 24612445
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  24612726 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 24612627  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  24612626 gcaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcattccatgaaacttattccaaggagaa 24612527  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtt---ttttgcttataaattag 506  Q
    || | ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||   |||||||||||||||||    
T  24612526 cataaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattagtgtttttttttgcttataaattag 24612445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 228 - 518
Target Start/End: Original strand, 44052535 - 44052826
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  44052535 tctcattttctttatctcaaaatataagcaaaaaaaaccaacttttatgttattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 44052634  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||    
T  44052635 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccagaaaacttattccaaggaga 44052734  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggaggagta 518  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  44052735 acacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtgaattagtattttttgcttataaattaggatggagtagta 44052826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 230 - 514
Target Start/End: Original strand, 11992644 - 11992929
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaatg 328  Q
    ||||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  11992644 tcatattctttgtattaaaatataagcaaaaaaaacctacttttatgctattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatg 11992743  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaac 428  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  11992744 caaattgcattcaatttgttcacctttttcttttctccataatttttaaccaatgagaattatttttacatcttttcatgaaacttattccaaggagaac 11992843  T
Q  429 acataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  11992844 acaaaaaattatacctcaaatcactaagtgttagttttcttaattagtgtgaattagtgttttttacttataaattaggacggagg 11992929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 235 - 514
Target Start/End: Complemental strand, 25321825 - 25321546
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  25321825 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 25321726  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| |||||||||||| ||    
T  25321725 gcatttaatttgctctcctttttattttctccataatttttaacctatgaaaattatttttacatctttccataaaacttattccaaggagaacacagaa 25321626  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25321625 aattatacctcaaatcaccaaatgttagttttctaaataagtgtgaattagtgttttttgcttataaattaggacggagg 25321546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 39187149 - 39187431
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaa-cttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    |||||||||||  |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  39187149 tctcatattct--gtctcaaaatataagcaaaaaaaaacaaacttttatgctattattatgttttttcaaacaaatcatcatttccaatgtaaaattaaa 39187246  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| || ||||    
T  39187247 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttattccaacgaga 39187346  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||   |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  39187347 acac---aaattatacctcaaatcactaagtgttagttttcttaataagcgtgaattagtgttttttgcttataaattatgacggagg 39187431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 228 - 493
Target Start/End: Original strand, 36537973 - 36538238
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  36537973 tctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 36538072  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36538073 gcaatttgcatttaatttattctcctttttattttctccatgatttttaaccaatgagaattatttttacatctttccatgaaacttattctaaagagaa 36538172  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtttttt 493  Q
    || | |||||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  36538173 cataaaaaattattcctcaaatcactaaatgttagttttcttaataaatgtgaattagtgtttttt 36538238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 35346550 - 35346267
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||    
T  35346550 tctcatattctttgtctcaaaatataaataaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattgaat 35346451  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  35346450 gcaaattgcattcaatgtattctcctttttattatctccataatttttaaccaatgagaattatttttacatctttccatgaaatttatttcaaggagaa 35346351  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||| ||||||||||||||||||| ||| | ||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  35346350 cacaaaaaattatacctcaaatcactaaatattaattttcttaataaatgtgaattagagtttttt-cttataaattaggacgga 35346267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 284 - 514
Target Start/End: Complemental strand, 31133219 - 31132991
Alignment:
Q  284 tatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatg 383  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31133219 tatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatg 31133120  T
Q  384 agaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 483  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31133119 agaattatttttacatctttccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaatt 31133020  T
Q  484 agtgttttttgcttataaattaggacggagg 514  Q
    |  ||||||||||||||||||||||||||||    
T  31133019 a--gttttttgcttataaattaggacggagg 31132991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 32678753 - 32678477
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||| | |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32678753 tcattttctttgttttaaaatataagcaaaaaagataaacttttatgttattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 32678654  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  32678653 aagttgcatttaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaagaagaaca 32678554  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    || ||||||         |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  32678553 caaaaaatt---------atcactaagtgttagttttcttaataagtgtgaattaatgtttttttgcttataaattaggacggagg 32678477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 228 - 449
Target Start/End: Complemental strand, 33851269 - 33851048
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  33851269 tctcattttctttgcctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 33851170  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||    
T  33851169 gcaagttgcatttaatttgttttcctttttattttctccatgatttttaactaatgagaattatttttacatctttccatgaaacttattccaaagagaa 33851070  T
Q  428 cacataaaattatacctcaaat 449  Q
    |||| |||||||| ||||||||    
T  33851069 cacaaaaaattattcctcaaat 33851048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 249 - 457
Target Start/End: Complemental strand, 44358716 - 44358508
Alignment:
Q  249 atataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgtt 348  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  44358716 atataagcaaaaaagatcaacttttatgttattattacgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgtt 44358617  T
Q  349 ctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaa 448  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||| ||| ||||||||||||||||||| |||||||||||| |||    
T  44358616 ctcctttttattttctccataatttttaattaatgagaattatttttacatattttcataaaacttattctaaggagaacacaaaaaattatacctaaaa 44358517  T
Q  449 tcattaagt 457  Q
    ||| |||||    
T  44358516 tcactaagt 44358508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 257 - 456
Target Start/End: Complemental strand, 37567648 - 37567449
Alignment:
Q  257 aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttt 356  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  37567648 aaaaaataccaacttttatgctattattatgttttttcagacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttttcctttt 37567549  T
Q  357 tattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaag 456  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || ||||||||| ||||||||||||||||||| ||||    
T  37567548 tattttctccataatttttaatcaatgagaattatttttccatctttccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaag 37567449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 296 - 514
Target Start/End: Original strand, 34713511 - 34713729
Alignment:
Q  296 aacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattttt 395  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34713511 aacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattttt 34713610  T
Q  396 acatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgc 495  Q
    ||||||||| |  ||| |||||  ||| | |||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||| |    
T  34713611 acatctttctagaaaacttatttcaagaaaaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtgaattagtattttttac 34713710  T
Q  496 ttataaattaggacggagg 514  Q
    |||||| ||||||||||||    
T  34713711 ttataacttaggacggagg 34713729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 12108084 - 12108357
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaaga-ccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||| ||| ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| ||||| ||| ||||||| ||    
T  12108084 tctcatattttttatctcaaaatataagcaaaaaaaaaccaacttttatgccattattatattttttcaaacaaatcattttttc-aatgtaaaattcaa 12108182  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||              |||||| ||||||| |||||  || || |    
T  12108183 tgcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatg--------------atcttttcatgaaacttatttcaaagata 12108268  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagt-gttttttgcttataaattaggacggagg 514  Q
    ||||| |||||||||| |||||| | ||| ||||||||||||||||||||| |||||| |  |||||| |||||||||||| |||||||    
T  12108269 acacaaaaaattatacttcaaattactaaatgttagttttcttaataagtgagaattaatattttttttcttataaattagaacggagg 12108357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 2238828 - 2238555
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||  ||||||||||||||||||||||||||            | |||| ||||||| ||||||||||||| ||  |||||||||||    
T  2238828 tctcattttctttgtcctaaaatataagcaaaaaagaccaactt-----------ctgtgttatttcaaaaaaatcatcttttccaaagtaaaattaaat 2238740  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||| ||||||||||||||||||||| ||||  |||||| ||| ||||||||| | |||| ||||||||||||||||||||| |||||| ||| | ||    
T  2238739 gcaaatcgcattcaatttgttctcctttctattcactccatgattattaaccaataataattgtttttacatctttccatgaaacttattccaagaaaaa 2238640  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||  ||||||||||||||||  | || || || |||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  2238639 cac--aaaattatacctcaaactactatgtttttgttttcttaataagtgtgaatttgtgttttttgcttataaattgagacggagg 2238555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 299 - 512
Target Start/End: Original strand, 41426325 - 41426538
Alignment:
Q  299 aaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttaca 398  Q
    ||||||||||||  ||  |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||| | |||| ||| ||||    
T  41426325 aaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttatcctttctattatctccataatcattaaccaataataattgtttataca 41426424  T
Q  399 tctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgctta 498  Q
    ||||||||||||| |||||| ||| |||||||| |||||||||||| |||  | || || || ||||| | ||||| ||||||||  |||||||||||||    
T  41426425 tctttccatgaaacttattccaagaagaacacaaaaaattataccttaaactactatgtttttgttttttcaataaatgtgaatttttgttttttgctta 41426524  T
Q  499 taaattaggacgga 512  Q
    |||||| |||||||    
T  41426525 taaattgggacgga 41426538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 283 - 514
Target Start/End: Complemental strand, 24510886 - 24510657
Alignment:
Q  283 ttatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 382  Q
    ||||||| ||||||| ||||||| ||||| ||  ||  |||||||||||||||||||||||||||||| ||||||||| | ||||||||  |||||||||    
T  24510886 ttatgttatttcaaaaaaatcattttttccaaagtagtattaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaat 24510787  T
Q  383 gagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaat 482  Q
     | |||| ||||||||||||||||||||| |||||| ||  | |||||  ||||||||||||||||  | || || || ||||| |||||||||||||||    
T  24510786 aaaaattgtttttacatctttccatgaaacttattccaataaaaacac--aaaattatacctcaaactactatgtttttgttttattaataagtgtgaat 24510689  T
Q  483 tagtgttttttgcttataaattaggacggagg 514  Q
    |  ||||||||||||||||||| ||| |||||    
T  24510688 ttatgttttttgcttataaattgggatggagg 24510657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 40486628 - 40486505
Alignment:
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    |||||||| |||| ||||||||||||||| ||||||||||| ||| | |||||||||||||||||||| ||||| ||||||||||||||| ||| |||||    
T  40486628 ttcaatttattcttctttttattttctccttaatttttaactaataaaaattatttttacatctttccttgaaacttattctaaggagaatacaaaaaat 40486529  T
Q  438 tatacctcaaatcattaagtgtta 461  Q
    ||||||||||||||||||||||||    
T  40486528 tatacctcaaatcattaagtgtta 40486505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 282 - 479
Target Start/End: Original strand, 34899894 - 34900090
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||| ||||||| ||||||||||||||||  ||||||||||||| |||| ||||||||||||| | |||| || ||||||||| ||   |||||||    
T  34899894 attatgttatttcaaa-aaatcatcttttctaaagtaaaattaaatgctaatttcattcaatttgtttttctttatactttctccatgatcaataaccaa 34899992  T
Q  382 tgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 479  Q
    | | ||||||||||| ||| | | || ||| ||||||||||  ||||||| |||| |||| | ||||| |||| || |||||||||||||||||||||    
T  34899993 tcaaaattatttttaaatcctcctataaaacttattctaagaggaacacaaaaaaatatatcgcaaattattatgttttagttttcttaataagtgtg 34900090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 822 - 945
Target Start/End: Original strand, 40930829 - 40930954
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccatataca 920  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||| | || ||||||||||||||| || | |||    
T  40930829 gaaatggcaaaatattattaaccaacaagcccgtgcaagaagcactaataagctcgggtggaaaaaaatacaaacaaggggaaatcggttgtcacaaaca 40930928  T
Q  921 ccggctcg-acaaaaaccccttaaaa 945  Q
     ||||||| |||||||| ||||||||    
T  40930929 acggctcgaacaaaaactccttaaaa 40930954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 228 - 449
Target Start/End: Original strand, 16643296 - 16643519
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttca--aacaaatcatcttttctaatctaaaattaa 325  Q
    |||||| |||||||||  |||||||||   | ||| ||||||||| ||| ||||| ||| |||||||   || |||||| |||||  ||  |||||||||    
T  16643296 tctcattttctttgtcctaaaatataaatgagaaataccaactttcatggtattactattttttttcttcaaaaaatcaactttttaaaagtaaaattaa 16643395  T
Q  326 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggag 425  Q
    ||||||||| ||||||| || || ||||||||||||||||||||||  || ||||||||||| | | ||||||||||||||| ||| |||||| | | ||    
T  16643396 atgcaaattacattcaagttattttcctttttattttctccataatcattgaccaatgagaaatgtatttacatctttccataaaacttattccaggaag 16643495  T
Q  426 aacacataaaattatacctcaaat 449  Q
    || ||| ||| ||||||| |||||    
T  16643496 aatacaaaaagttataccccaaat 16643519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 228 - 358
Target Start/End: Original strand, 16635490 - 16635620
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    |||||| |||||||||  |||||||||| || ||||||||||||||||||||||| |||||||| |||||| ||||||||||||| ||  ||||||| ||    
T  16635490 tctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttcttcaaa-aaatcatcttttcaaaagtaaaatttaa 16635588  T
Q  327 tgcaaattgcattcaatttgttctccttttta 358  Q
    | |||||| ||||||| ||||| |||||||||    
T  16635589 ttcaaatttcattcaagttgttttccttttta 16635620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 229 - 371
Target Start/End: Original strand, 17314744 - 17314887
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||  |||| ||||||||||||||| ||||||||||  ||||  |||||||||||||||| || | |||||||||||   |||||||||    
T  17314744 ctcattttctttgttccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aacttatcttttctaaaagaaaattaaa 17314842  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    | |||| ||||||||||||| ||||||||| |||||||| |||||    
T  17314843 tccaaagtgcattcaatttgctctccttttcattttctctataat 17314887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 235 - 402
Target Start/End: Original strand, 8673302 - 8673469
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    ||||||||| |||| ||||||||||||||||||||||||||  |||| ||  || |||| ||| |||| |||||||| ||   ||||||||||||||| |    
T  8673302 ttctttgtcccaaattataagcaaaaaagaccaacttttatcatattttttagtgtttttaaaaaaattatcttttccaaaggaaaattaaatgcaaagt 8673401  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
     ||||||||||| |||| |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  8673402 acattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 8673469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 228 - 358
Target Start/End: Original strand, 16635354 - 16635488
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-----caaacaaatcatcttttctaatctaaaat 322  Q
    |||||| |||||||||  |||||||||| || ||||||||||||||||||||||| ||||||||||     |||| ||||||||||||| ||  ||||||    
T  16635354 tctcattttctttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttttttcttcaaa-aaatcatcttttcaaaagtaaaat 16635452  T
Q  323 taaatgcaaattgcattcaatttgttctccttttta 358  Q
    | ||| |||||||||||||| ||||| |||||||||    
T  16635453 ttaattcaaattgcattcaagttgttttccttttta 16635488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 31133828 - 31133765
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt 293  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  31133828 tcatattctttgtctcaaaatataagaaaaaaagaccaacttttatgctattgttatgtttttt 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 229 - 431
Target Start/End: Original strand, 5217306 - 5217509
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||  |||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| | ||||||||| | ||    ||||||||    
T  5217306 ctcattttctttgtaccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-acatcatctttcccaaggagaaattaaa 5217404  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||| ||||||||| | || | ||  ||| |||||||| |||| |  |||||||| | |||| |||||||||||||| |||||| |||||  ||||| |    
T  5217405 tgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggata 5217504  T
Q  427 acaca 431  Q
    |||||    
T  5217505 acaca 5217509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 453 - 514
Target Start/End: Complemental strand, 37566518 - 37566457
Alignment:
Q  453 taagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37566518 taagtattagtttttttaataagtgtgaattagtgttttttgcttataaattaggacggagg 37566457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 228 - 358
Target Start/End: Original strand, 16635622 - 16635756
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-----ttcaaacaaatcatcttttctaatctaaaat 322  Q
    |||||| || ||||||  |||||||||| || ||||||||||||||||||||||| ||||||||     |||||| ||||||||||||| ||  ||||||    
T  16635622 tctcattttatttgtcctaaaatataagtaagaaagaccaacttttatgctattactatgttttttatcttcaaa-aaatcatcttttcaaaagtaaaat 16635720  T
Q  323 taaatgcaaattgcattcaatttgttctccttttta 358  Q
    | ||| |||||||||||||| ||||| |||||||||    
T  16635721 ttaattcaaattgcattcaagttgttttccttttta 16635756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 34890331 - 34890133
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  34890331 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 34890232  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| ||||||||||  |||||  ||| || ||||||||||||||||||||||  ||  | |||||||||||||| || |||||||||    
T  34890231 tccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattttttttttttttgcttataatttgggacggagg 34890133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 319 - 480
Target Start/End: Complemental strand, 29920423 - 29920262
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    ||||||||| | |||| ||||||||||   |||  || |||||| ||||||||   || ||||||| |||| |||||||||||| |||||||| ||||||    
T  29920423 aaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccatgaaacttattc 29920324  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
     || || |||||| |||||| ||| ||||||  ||| || ||||||||||||||||||||||    
T  29920323 caaagataacacaaaaaattgtacttcaaattcttatgttttagttttcttaataagtgtga 29920262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 40487870 - 40487794
Alignment:
Q  268 acttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaattt 345  Q
    |||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  40487870 acttttttgctattattatgttttt-caaacaaatcatcttttccaatgtaaaattcaatgcaagttgcattcaattt 40487794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 826 - 945
Target Start/End: Original strand, 5200485 - 5200608
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgc--catatacacc 922  Q
    ||||||||||||||||||||||||| |||||| |||  |||||| ||| | ||||||||||||| | |||| |||| |||||||||||  || | |||||    
T  5200485 cggcaaaatattattaaccaacaagtccgtgcaagaaacactaataagtttgggtggagaaaaaaacatacaagggaaaatcggttgccgcacaaacacc 5200584  T
Q  923 ggctcg-acaaaaaccccttaaaa 945  Q
    |||||| |||||||||||||||||    
T  5200585 ggctcgaacaaaaaccccttaaaa 5200608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 17336713 - 17336830
Alignment:
Q  284 tatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatg 383  Q
    |||||||||||||| |||| |||||||||||   ||||||||||||||| ||||||||||||| ||||||||| |||| ||| |||||     |||||||    
T  17336713 tatgttttttcaaa-aaattatcttttctaaaggaaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatg 17336811  T
Q  384 agaattatttttacatctt 402  Q
    | |||| ||||||||||||    
T  17336812 aaaattgtttttacatctt 17336830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 822 - 946
Target Start/End: Original strand, 13959218 - 13959348
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaa--taaataccaggggaaatcggttgccatata 918  Q
    |||||||||||||||||||| |||||||||||||||| || ||| ||| ||||||||||||| |||||  || | || | || ||||||||||||| |||    
T  13959218 gaaacggcaaaatattattagccaacaagcccgtgcaagaagcaataataagctcgggtggaaaaaaaaatacaaacaaaggaaaatcggttgccacata 13959317  T
Q  919 --caccggctcga-caaaaaccccttaaaac 946  Q
      ||||||||| | |||||||||||||||||    
T  13959318 aacaccggctcaaacaaaaaccccttaaaac 13959348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 431
Target Start/End: Complemental strand, 2628400 - 2628207
Alignment:
Q  239 ttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgc 336  Q
    ||||| |||| |||||| |||||| ||||||||||||  ||||  ||||| || ||||||| |||| |||||||  ||   |||||| |||||||| ||     
T  2628400 ttgtcccaaattataagaaaaaaacaccaacttttatcatatttaattatattgtttcaaa-aaattatctttttcaaaggaaaatttaatgcaaagtga 2628302  T
Q  337 attcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    |||||||||| ||||  ||| |||||||| ||||    |||||||||| ||||||||||||||||| | || ||| ||||| |||||| ||||||    
T  2628301 attcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttattttaaggataacaca 2628207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 826 - 952
Target Start/End: Original strand, 24200625 - 24200754
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgc--catatacacc 922  Q
    ||||||||||||||||| ||||||| |||||| ||| ||||||| ||||| ||||||| ||||| | |||| ||||||||||||||||  || | |||||    
T  24200625 cggcaaaatattattaatcaacaagtccgtgcaagaagcactaataagcttgggtgga-aaaaaaacatacaaggggaaatcggttgccgcaaaaacacc 24200723  T
Q  923 ggctcg-acaaaaaccccttaaaaccacccc 952  Q
    |||||| |||||||| | | |||||||||||    
T  24200724 ggctcgaacaaaaacacttaaaaaccacccc 24200754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 371
Target Start/End: Complemental strand, 41791699 - 41791563
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    |||||||||  ||| ||||||||||| | || |||||||||  ||||  ||||| |||||||||| ||||||||||||| ||   ||||||||||| |||    
T  41791699 ttctttgtcctaaattataagcaaaacaaac-aacttttatcatatttaattatcttttttcaaa-aaatcatcttttccaaaagaaaattaaatgtaaa 41791602  T
Q  333 ttgcattcaatttgttctcctttttattttctccataat 371  Q
     ||||||||||||| |||| ||||||||||||| |||||    
T  41791601 atgcattcaatttgctctcttttttattttctctataat 41791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 398 - 512
Target Start/End: Original strand, 2052947 - 2053061
Alignment:
Q  398 atctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgctt 497  Q
    ||||| |||| ||| ||||||||| || |||||| |||||||||| || ||| |||| || |||||||||||||||||||||| |||   ||||||||||    
T  2052947 atcttcccataaaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttttcttaataagtgtgatttaagtttttttgctt 2053046  T
Q  498 ataaattaggacgga 512  Q
    | || || |||||||    
T  2053047 acaatttgggacgga 2053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 831 - 945
Target Start/End: Original strand, 25829272 - 25829392
Alignment:
Q  831 aaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg--agaaaaataaataccaggggaaatcggttgcc--atatacaccggc 925  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||  | ||||||| | || |||||||||||||| ||  ||| ||||||||    
T  25829272 aaatattattaaccaacaagcccgtgcaagaagcactaataagctcgggtggaaaaaaaaatacaaacaaggggaaatcggtttccctataaacaccggc 25829371  T
Q  926 tcg-acaaaaaccccttaaaa 945  Q
    | | | |||||||||||||||    
T  25829372 ttgaataaaaaccccttaaaa 25829392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 319 - 483
Target Start/End: Original strand, 27740611 - 27740772
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||| ||||| ||||| ||||| ||| |||| |||||||| ||| ||   || ||||| |||||||||||||||||||||  ||||| ||||||    
T  27740611 aaattaaatgtaaatttcattcgatttgctcttctttctattttcttcatgatcaatagccaattagaattatttttacatctttcagtgaaacttattc 27740710  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 483  Q
     |   | |||||| ||||||||| ||||||| | || || ||| |||| ||||||||| ||||||    
T  27740711 aa---aaaacacaaaaaattatatctcaaattactatgttttaatttttttaataagtatgaatt 27740772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 343
Target Start/End: Original strand, 17713137 - 17713252
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| |||||| |||||||||||||||||||  ||||  ||||| || |||| ||||||| |||||||| ||   |||||||||    
T  17713137 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattgtttc-aacaaattatcttttccaaaggaaaattaaa 17713235  T
Q  327 tgcaaattgcattcaat 343  Q
    |||||| ||||||||||    
T  17713236 tgcaaagtgcattcaat 17713252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 402
Target Start/End: Complemental strand, 25195277 - 25195118
Alignment:
Q  245 caaaatataagcaaaaaa-gaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattca 341  Q
    |||| ||||||||||||| | ||||||| |||  ||||  |||||||||||||||| || | |||||||| ||   ||||||||||||||| ||||||||    
T  25195277 caaattataagcaaaaaaaggccaacttctatcatatttaattatgttttttcaaa-aacttatcttttccaaagaaaaattaaatgcaaagtgcattca 25195179  T
Q  342 atttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||| |||| |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  25195178 atttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatctt 25195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 26483535 - 26483731
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||| ||||| ||||||||||  |||   ||| ||||| ||||||||   || ||||||| |||| |||||||||||  | || ||| || |    
T  26483535 taaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaactttt 26483634  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |  || || |||||| |||| ||||| ||||||  ||| || ||||||||||||||||||||| |||  |||||||| ||||||| || |||||||||    
T  26483635 ttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg-atttttgtttttttcttataatttgggacggagg 26483731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 828 - 888
Target Start/End: Original strand, 38086419 - 38086480
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||||||||    
T  38086419 gcaaaatattattaaccaataagcccgtgcaagacgcactaataagctcgggtggagaaaaa 38086480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 13144226 - 13144174
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  13144226 ctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatcctatt 13144174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 15824725 - 15824641
Alignment:
Q  386 aattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttctta 470  Q
    |||| ||||||||||||||||||||| ||||||||| || |||||| |||| ||||| ||||||  ||| || ||||||||||||    
T  15824725 aattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttctta 15824641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 16635786 - 16635871
Alignment:
Q  260 aaagaccaacttttatgctattattatgttt--tttcaaacaaatcatcttttctaatct-aaaattaaatgcaaattgcattcaa 342  Q
    ||||||||| ||||||||||||| |||||||  ||||||| ||||||||||||| ||  | ||||||||||||||||| |||||||    
T  16635786 aaagaccaatttttatgctattactatgttttctttcaaaaaaatcatcttttcaaaagtaaaaattaaatgcaaatttcattcaa 16635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 826 - 918
Target Start/End: Complemental strand, 22839383 - 22839289
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaataa-ataccaggggaaatcggttgccatata 918  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||| |||| ||||| |||| || | |  || |||||||||||||||||||    
T  22839383 cggcaaaatattattaaccaacaagcccgtgcaagacgcactaataagttcggatggaggaaaaaaacaaagaagaggaaatcggttgccatata 22839289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 402
Target Start/End: Complemental strand, 26954632 - 26954464
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgcta--ttattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| |||| |||||| |||||||||||| ||||||  ||  ||| |||||| ||||||| |||| |||||||| ||   |||||||||||||||    
T  26954632 ttctttgtcccaaattataagtaaaaaagaccaaattttatcatattttactatgttgtttcaaa-aaattatcttttccaaaagaaaattaaatgcaaa 26954534  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
     |||||||| |||| | ||  ||| |||||||| ||||     ||||||||| |||| ||||||||||||    
T  26954533 gtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatctt 26954464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 4047049 - 4046932
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| |||| |||||  ||||  ||||||||| |||||||    |  ||||||| |||||||||||||| ||||||||||| |||||     
T  4047049 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatgaaacttatta 4046950  T
Q  419 taaggagaacacataaaa 436  Q
    ||| || |||||| ||||    
T  4046949 taaagaaaacacacaaaa 4046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 16643195 - 16643284
Alignment:
Q  260 aaagaccaacttttatgctattattatgttttttc-aaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgtt 348  Q
    ||||| ||||||||||  ||||||||||||||||  ||||||||||||||||| ||  |||||| |||||||||||  |||||| |||||    
T  16643195 aaagatcaacttttatcttattattatgttttttttaaacaaatcatcttttcaaaagtaaaataaaatgcaaattatattcaagttgtt 16643284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 4047159 - 4047107
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  4047159 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttattctatt 4047107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 822 - 858
Target Start/End: Complemental strand, 7845173 - 7845137
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgca 858  Q
    |||||||||||||||||||||||||||||||||||||    
T  7845173 gaaacggcaaaatattattaaccaacaagcccgtgca 7845137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 370
Target Start/End: Original strand, 27819585 - 27819715
Alignment:
Q  241 gtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcat 338  Q
    |||| ||| |||||||||||||||  |||||||||  ||||  ||| |||| ||||||| ||||||||||||  ||   ||||||||||||||| | |||    
T  27819585 gtcttaaattataagcaaaaaagataaacttttatcatatttaattttgttatttcaaa-aaatcatctttttcaaaggaaaattaaatgcaaactacat 27819683  T
Q  339 tcaatttgttctcctttttattttctccataa 370  Q
    | |||||| ||||| |||||||||||| ||||    
T  27819684 ttaatttgctctcccttttattttctctataa 27819715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 501
Target Start/End: Original strand, 36190775 - 36190959
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||||||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  36190775 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 36190874  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataa 501  Q
    |  || || |||||| |||| |||||   ||||  ||| || ||||||||||||| |||||||| ||  | |||||| |||||||    
T  36190875 ttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaacaagtgtgatttttttttttttacttataa 36190959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 402
Target Start/End: Complemental strand, 41362498 - 41362379
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||||||||||| |||| |||||||| ||   ||||||||||||||| |||||| |||||| || | |||| |||||||| |||||     |||||    
T  41362498 attatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaa 41362400  T
Q  382 tgagaattatttttacatctt 402  Q
    ||| |||| ||||||||||||    
T  41362399 tgaaaattgtttttacatctt 41362379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 28497750 - 28497641
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattg 335  Q
    |||||| |||| ||||||||||| | ||||||||||||  ||||  |||||||| ||||||| |||| |||||||| ||   ||||||||||||| | ||    
T  28497750 tttgtcccaaattataagcaaaatataccaacttttatcatatttaattatgttatttcaaa-aaattatcttttccaaaggaaaattaaatgcatagtg 28497652  T
Q  336 cattcaatttg 346  Q
    |||||||||||    
T  28497651 cattcaatttg 28497641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 317 - 404
Target Start/End: Complemental strand, 35456181 - 35456094
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 404  Q
    |||||||||||| ||||| |||||| |||  ||||  ||||||||| |||||||||  || ||||||| |||| ||||||||||||||    
T  35456181 taaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttc 35456094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 41809059 - 41809016
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  41809059 tttgtctcaaaatataagcaaaaaagacaaacttttattctatt 41809016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 34890439 - 34890393
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  34890439 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 34890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 493
Target Start/End: Complemental strand, 8709941 - 8709767
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| |||||||||  |||||  || ||||||||||||||  | ||  |||||| || | ||||||| |||| |||||| | ||||    
T  8709941 taaaattaaatgcaaattacattcaatt--ttctctcttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccatgagacttat 8709844  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtttttt 493  Q
    |  || || |||||| |||| |||||  |||||  ||| || |||||||| ||| ||||||||| || | |||||||    
T  8709843 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgtgattttgagtttttt 8709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 7022631 - 7022591
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  7022631 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 7022591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 7858460 - 7858500
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  7858460 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 7858500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 8711881 - 8711965
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||||||||||||||||    
T  8711881 aaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatctt 8711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 24892733 - 24892785
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||| |||||    
T  24892733 ctcattttctttgttccaaaatataagcaaaaaagacaaacttttatcctatt 24892785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 35525493 - 35525545
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  35525493 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatt 35525545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 36190666 - 36190718
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| |||||||||||||||||||||  |||||||| |||||    
T  36190666 ctcattttctttgtcccaaaatataagcaaaaaagacacacttttatcctatt 36190718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 38072117 - 38072157
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  38072117 ttctttgtcccaaattataagcaaaaaagaccaacttttat 38072157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 888
Target Start/End: Original strand, 584134 - 584201
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||| ||||| | |||| ||||||    
T  584134 gaaacggcaaaatattattagccaacaagcccgtacaagaagcactaataagcttgagtggggaaaaa 584201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 41362885 - 41362846
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaactttta 274  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  41362885 ttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 13143659 - 13143705
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||  |||||||||    
T  13143659 ctcattttctttgtcccaaaatataagcaaaaaagataaacttttat 13143705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 30576086 - 30576040
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||||||| ||||||||||||||||||||| || |||||| |||||    
T  30576086 ttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatt 30576040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 4039037 - 4038984
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    ||||||||||| ||| ||||||||||||| |||| |||| |||||||| |||||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataat 4038984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 29147393 - 29147340
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    ||||||||||||||| |||||| |||||| ||||| ||| |||||||| |||||    
T  29147393 aaaattaaatgcaaactgcatttaatttgatctccatttcattttctctataat 29147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 255; Significance: 1e-141; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 792600 - 792314
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  792600 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaatcatcttttccaatgtaaaattaaat 792501  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  792500 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 792401  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  792400 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 792314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 21539669 - 21539955
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  21539669 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 21539768  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  21539769 gcaagttgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 21539868  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21539869 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 21539955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 232 - 514
Target Start/End: Complemental strand, 14565614 - 14565331
Alignment:
Q  232 atattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaatgca 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||    
T  14565614 atattctttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtttttttcaaagaaatcatcttttccaatgtaaaattaaatgca 14565515  T
Q  331 aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacac 430  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14565514 aattgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacac 14565415  T
Q  431 ataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14565414 aaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaattaggacggagg 14565331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 29514263 - 29513978
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  29514263 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttttaatgtaaaattaaat 29514164  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  29514163 gcaaattgcattcaatttgttctcatttttattttctctataatttttaaccaatgaaaattatttttacatcttttcatgaaatttattctaaggagaa 29514064  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29514063 cacaaaaaattatacctcaaattactaagtgtta-ttttcttaataagtgtgaattactgttttttgcttataaattaggacggagg 29513978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 33635248 - 33635534
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  33635248 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttctaatgtaaaattaaat 33635347  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||    
T  33635348 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaatttattccaagaaaaa 33635447  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33635448 cacaaaaaattatatctcaaatcactaaatattagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 33635534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 232 - 514
Target Start/End: Original strand, 35832328 - 35832610
Alignment:
Q  232 atattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaa 331  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  35832328 atattctttgtctcaaaatataagcaaaaaagacatatttttatgctattattatgttttttcaaacaaatcatcttttccaatataaaattaaatgcaa 35832427  T
Q  332 attgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  35832428 attgcattcaatctgttcacctttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaatttattccaaggagaacaca 35832527  T
Q  432 taaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35832528 aaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggatggagg 35832610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 506
Target Start/End: Complemental strand, 38549887 - 38549609
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  38549887 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcatcttttccaatgtaaaattaaat 38549788  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  38549787 gcaagttgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 38549688  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 506  Q
     ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38549687 tacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 38549609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 29514718 - 29514433
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  29514718 tctcatattctttgtctcaaaatataag-aaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttcccaatgtaaaattaaat 29514620  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||    
T  29514619 gtaaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgaaaattatttttacatcttttcatgaaacttattctaaggataa 29514520  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||| | |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  29514519 cacaaaaaattatacctcaaattactaagtgttagtttttttaataagtatgaattactgttttttgcttataaattaggacggagg 29514433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 43075662 - 43075947
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  43075662 tctcatattttttgtgtcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatctattccaatgtaaaattaaat 43075761  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||||    
T  43075762 gcaaattgcattcaatttgttttcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttatttcaaggagaa 43075861  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || | ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43075862 cata-aaaattacacctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaattaggacggagg 43075947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 235 - 508
Target Start/End: Original strand, 28492439 - 28492712
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  28492439 ttctttgtcttaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcattttttccaatgtaaaattaaatgcaaatt 28492538  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| ||    
T  28492539 gcattcaacttattctcctttttattttctctataatttttaaccaatgagaattatttttacatatttccatgaaacttattccaaggagaacacaaaa 28492638  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattagga 508  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  28492639 aattatatctcaaatcattaagtgttagttttcttaataagtgtgatttagtgctttttgcttataaattagga 28492712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 4091922 - 4092209
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaa 326  Q
    |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||| ||||||||||||  ||| ||||||||||    
T  4091922 tctcattttctttgtctcaaaatataagcaagaaaaaccaacttttatgctattattatatttttttcaaataaatcatctttttcaatgtaaaattaaa 4092021  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  4092022 tgcaagttgcattcaatttgttctcctttttgttttttccataatttttaaccattgagaattatttttacatctttccatgaaacttattccaaggaga 4092121  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  4092122 acacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaagtagtgttttttgcttataaattagaacggagg 4092209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 5091784 - 5091498
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt--caaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||||||||||||  ||| |||||||||||    
T  5091784 tcatattctttatctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttttcaaacaaatcatctttttcaatgtaaaattaaat 5091685  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || | ||||    
T  5091684 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttttcatgaaacttattttaggaagaa 5091585  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  5091584 cacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaattaaaacggagg 5091498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 8784307 - 8784594
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||    
T  8784307 tctcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgctattattatgttatttcaaacaaatcatctttttcaatgtaaaattaaat 8784406  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||  ||| ||||    
T  8784407 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaatcaataagaattatttttacatctttccatgaaacttatttcaagaagaa 8784506  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||  |||||||    
T  8784507 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtatgaattaatgtttttttgcttataaattaaaacggagg 8784594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 232 - 514
Target Start/End: Original strand, 28424190 - 28424471
Alignment:
Q  232 atattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaa 331  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  28424190 atattctttgtctcaaaatttaagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaa 28424289  T
Q  332 attgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||| |||||| ||||||||||||    
T  28424290 attgtattcaatttgttctcctttttattttctccataatttttaacc---gaaaattatttttacatctttccatgaaacttattccaaggagaacaca 28424386  T
Q  432 taaaattatac--ctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     ||  || |||  ||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  28424387 aaattttttacatctcaaatcactaagtgttagttttcttaataagtatcaattagtgttttttgcttataaattaggacggagg 28424471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 10478087 - 10478376
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaaga--ccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaatta 324  Q
    |||||| || ||||||||||||||||||||||||| |  |||| |||||||||||| ||||||||| ||||||||||| |||||||| ||| ||||||||    
T  10478087 tctcattttttttgtctcaaaatataagcaaaaaaaaaaccaatttttatgctatttttatgtttttttcaaacaaatgatcttttccaatgtaaaatta 10478186  T
Q  325 aatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaagga 424  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||    
T  10478187 aatgcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaagga 10478286  T
Q  425 gaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10478287 gaacacaaaaaattatatctcaactcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaattaggacggagg 10478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 240 - 515
Target Start/End: Original strand, 44803823 - 44804097
Alignment:
Q  240 tgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcatt 339  Q
    |||||||||||||||| ||||||||  |||||||||| ||||||||| |||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  44803823 tgtctcaaaatataagtaaaaaagataaacttttatgttattattatatttttt-aaataaatcatcttttccaatgtaaaattaaatacaaattgcatt 44803921  T
Q  340 caatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaatta 439  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||| |||||||    
T  44803922 caatttgttctcctatttattttctccataatttttaaccaatgagaattatttttacatctttccattaaacttattccaaggagaacacaaaaaatta 44804021  T
Q  440 tacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    |||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  44804022 tacctcaaatcactaagtgttaattttcttaataagtgtgaattaatgttgtttgcttataaattaggacggagga 44804097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 235 - 469
Target Start/End: Complemental strand, 4033912 - 4033678
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  4033912 ttctttgtctcaaaatataagcaaaaaagatcaatttttatgctattattatgttttttcaaacaaaacatctttttcaatgtaaaattaaatgcaaatt 4033813  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||    
T  4033812 gcattcaatttattctcctttttattttctccataatttttaaccaacgagaattatttttacatctttccatgaaacttattttaaggagaacacaaaa 4033713  T
Q  435 aattatacctcaaatcattaagtgttagttttctt 469  Q
    |||||||||||||||||||||||||||||||||||    
T  4033712 aattatacctcaaatcattaagtgttagttttctt 4033678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 283 - 514
Target Start/End: Original strand, 43451472 - 43451703
Alignment:
Q  283 ttatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 382  Q
    ||||||| ||||||||||||||||||||  ||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  43451472 ttatgttatttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaat 43451571  T
Q  383 gagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaat 482  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| |||||    
T  43451572 gaaaattatttttacatctttccatgaaacttattctaaggagaacacaaaaaatcatacctcaaatcactaaatgttagttttcttaataagtatgaat 43451671  T
Q  483 tagtgttttttgcttataaattaggacggagg 514  Q
    |||| |||||||||||||||||||||||||||    
T  43451672 tagtattttttgcttataaattaggacggagg 43451703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 235 - 514
Target Start/End: Complemental strand, 18834149 - 18833867
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttc---aaacaaatcatcttttctaatctaaaattaaatgcaa 331  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    ||| ||||||||||| ||||  |||||||||||||||    
T  18834149 ttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttttaaaaaaaaatcatcttt-ctaaagtaaaattaaatgcaa 18834051  T
Q  332 attgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||| |||||| ||| | ||||||    
T  18834050 attgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttattccaagaataacaca 18833951  T
Q  432 taaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagt-gttttttgcttataaattaggacggagg 514  Q
     ||||||||||||||||| |  |  | |||| |||||||||||||||||| | ||  |||||||||||||||||||||||||||    
T  18833950 aaaaattatacctcaaattacaatattttagctttcttaataagtgtgaaattgtatttttttgcttataaattaggacggagg 18833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 10979197 - 10979367
Alignment:
Q  344 ttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacc 443  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||    
T  10979197 ttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttattccaagaagaacacaaaaaattatacc 10979296  T
Q  444 tcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10979297 tcaaatcactaagtgttagttttcttaatgagtgtgaattagtgttttttgcttataaattaggacggagg 10979367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 257 - 514
Target Start/End: Complemental strand, 38071658 - 38071408
Alignment:
Q  257 aaaaaagaccaacttttatgctattattatgttt-----tttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctc 351  Q
    |||||||| ||||||||||| |||||||||| ||     ||||||||||||||||||||| ||| |||||||| || ||||||||||| |              
T  38071658 aaaaaagagcaacttttatgttattattatgattatgtttttcaaacaaatcatcttttccaatgtaaaattatatacaaattgcattaa---------- 38071569  T
Q  352 ctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatca 451  Q
      |||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||| |||||||||| ||||||||    
T  38071568 --tttttttttcttcataatttttaaccaatgagaattatttttacatctttccaaaaaacttattctaaggagaatacaaaaaattatacttcaaatca 38071471  T
Q  452 ttaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38071470 ctaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 38071408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 230 - 513
Target Start/End: Original strand, 15068660 - 15068933
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||      |||||     |||||  ||||||||||||| ||  |||||||||||||    
T  15068660 tcattttctttgtctcaaaatataagcaaaaaagatcaatttttat------attat-----ttcaagaaaatcatcttttccaaagtaaaattaaatgc 15068748  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||||||||||||||| |||| ||||||||||  ||||||||| |||||| ||| |||||||||| |||||| |||||| ||| ||||||    
T  15068749 aaattgcattcaatttgttctcctttctattctctccataatcattaaccaataagaattgtttatacatctttctatgaaatttattccaagaagaaca 15068848  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggag 513  Q
    || ||||| ||||||||||  | |  || || ||||||||||||||||||| ||  || ||||||||||||||||| ||||||||    
T  15068849 caaaaaatcatacctcaaactactctgtttttgttttcttaataagtgtgattttatgtttttttgcttataaattgggacggag 15068933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 283 - 510
Target Start/End: Complemental strand, 13822959 - 13822729
Alignment:
Q  283 ttatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 382  Q
    ||||||| ||| ||| |||| |||||||  ||  ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||    
T  13822959 ttatgttattttaaaaaaataatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcatttctattctctccataatcattaaccaat 13822860  T
Q  383 gagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaa---atcattaagtgttagttttcttaataagtgtg 479  Q
     |||||  ||||||||||||| ||||||| |||||||||| |||||||| |||||||||||||||   |  | || || || ||||||||||||||||||    
T  13822859 aagaatggtttttacatcttttcatgaaacttattctaagaagaacacaaaaaattatacctcaaaatactagtatgtttttgttttcttaataagtgtg 13822760  T
Q  480 aattagtgttttttgcttataaattaggacg 510  Q
    |||| || ||||||||||||||||| |||||    
T  13822759 aatttgtattttttgcttataaattgggacg 13822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 230 - 342
Target Start/End: Complemental strand, 15858852 - 15858740
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  15858852 tcatattctttgtctcaaaatataagtaaaaaagaccaaattttatgctattattatgttttttcaaataaatcatcttttccaatgtaaaattaaatgc 15858753  T
Q  330 aaattgcattcaa 342  Q
    |||||||||||||    
T  15858752 aaattgcattcaa 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 22162249 - 22162368
Alignment:
Q  246 aaaatataagcaaaaaagacc-aacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatt 344  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||     
T  22162249 aaaatataagcaaaaaagacttaacttttatgctattattatgttttttcaaacaaataatcttttccaatgtaaaattaaatgcaaattgcattcaatg 22162348  T
Q  345 tgttctcctttttattttct 364  Q
    ||||||||||||||||||||    
T  22162349 tgttctcctttttattttct 22162368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 264 - 514
Target Start/End: Original strand, 9294603 - 9294854
Alignment:
Q  264 accaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttc 363  Q
    ||||| ||||||| | |||||||||| ||||| | ||||||||||||  ||  |||||||||||||||||||||||||||||||||| || | |||| ||    
T  9294603 accaatttttatgttcttattatgttatttcataaaaatcatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttcttctctctattctc 9294702  T
Q  364 tccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagt 463  Q
    ||||||||  ||||||||| |||||| ||||||||| ||||||||||| |||||  ||| | || ||| |||||||||| |||||  | ||  | |||||    
T  9294703 tccataatcattaaccaataagaattgtttttacatttttccatgaaacttatttcaagaaaaatacaaaaaattatacttcaaactactatcttttagt 9294802  T
Q  464 tttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    ||||||||||| || |||||  || |||||| | ||||||||||||| ||||    
T  9294803 tttcttaataaatgcgaattgatgttttttttcctataaattaggactgagg 9294854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 420 - 514
Target Start/End: Complemental strand, 15858741 - 15858647
Alignment:
Q  420 aaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15858741 aaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtgaattagtgttttttgcttataaattaggacggagg 15858647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 10979104 - 10979186
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttc 311  Q
    |||||| || |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10979104 tctcattttttttgtctcaaaatata-gcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttc 10979186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 827 - 945
Target Start/End: Complemental strand, 41419748 - 41419624
Alignment:
Q  827 ggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg--agaaaaataaataccaggggaaatcggttgccata--tacac 921  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  | ||||| |||||| ||||||||||||||||||||   ||||    
T  41419748 ggcaaaatattattaaccaacaagcccgtgcaagatgcactaataagctcgggtggaaaaaaaaacaaatacaaggggaaatcggttgccataataacac 41419649  T
Q  922 cggctcg-acaaaaaccccttaaaa 945  Q
    || |||| |||||||||||||||||    
T  41419648 cgactcgaacaaaaaccccttaaaa 41419624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 230 - 436
Target Start/End: Original strand, 26998234 - 26998441
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||  ||| ||||||||||||||||||||||||||  ||||  ||||| |||||||||| |||| |||||||| ||   ||||||||||    
T  26998234 tcattttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatcttttccaaaggaaaattaaat 26998332  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||| ||||||||||||| |||| |||| |||||||| |||||     |||||||| |||| |||||||||||| | || ||| ||||| ||| || ||    
T  26998333 gcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttattttaaagataa 26998432  T
Q  428 cacataaaa 436  Q
    |||| ||||    
T  26998433 cacaaaaaa 26998441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 433 - 514
Target Start/End: Complemental strand, 38564756 - 38564675
Alignment:
Q  433 aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  38564756 aaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattatcgttttttgtttataaattaggacggagg 38564675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 824 - 953
Target Start/End: Complemental strand, 38908800 - 38908667
Alignment:
Q  824 aacggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcca-tatacac 921  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||||||| | |||||||||||| |||| |||||||| ||||  | ||||    
T  38908800 aacggcaaaatattattaaccaataaggccgtgcaagatgcactaataagctcgggtgaaaaaaaataaatacaagggaaaatcggtagccacaaaacac 38908701  T
Q  922 cggctcg-acaaaaacccctt-aaaaccacccca 953  Q
    ||| ||| ||||||||||||| ||||||||||||    
T  38908700 cggttcgaacaaaaaccccttaaaaaccacccca 38908667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 230 - 483
Target Start/End: Original strand, 32010019 - 32010273
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||  |||| |||||| |||||||| ||||||||||  ||||  ||||| |||||||||| |||| |||||||  ||   ||||||||||    
T  32010019 tcattttctttgttccaaattataagtaaaaaagatcaacttttatcatatttaattatattttttcaaa-aaattatctttttcaaaggaaaattaaat 32010117  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||| |||||| |||||| |||| |||| |||||||| |||||     |||||||| ||||||||||||||||| | || ||| |||||  || || ||    
T  32010118 gcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataa 32010217  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 483  Q
    |||| |||| ||||   ||||  | || || |||||||||||||||||||||||||    
T  32010218 cacaaaaaactatattacaaactactatgtattagttttcttaataagtgtgaatt 32010273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 358 - 480
Target Start/End: Complemental strand, 7645341 - 7645219
Alignment:
Q  358 attttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagt 457  Q
    |||||||||||||||  || ||||||| |||| ||||||||| || |||||||| |||||||||||| |||||| || |||||||  |||||  ||| ||    
T  7645341 attttctccataattaatagccaatgaaaattgtttttacatgttcccatgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgt 7645242  T
Q  458 gttagttttcttaataagtgtga 480  Q
     ||||||||||||||||||||||    
T  7645241 tttagttttcttaataagtgtga 7645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 245 - 371
Target Start/End: Original strand, 20380055 - 20380182
Alignment:
Q  245 caaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaa 342  Q
    |||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| | || |||||||| ||   ||||||||||||||| |||||||||    
T  20380055 caaattataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaatgcaaagtgcattcaa 20380153  T
Q  343 tttgttctcctttttattttctccataat 371  Q
    |||| |||| |||| |||||||| |||||    
T  20380154 tttgctctcgttttcattttctctataat 20380182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 38070912 - 38071085
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| |||||||||||||||| |||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||    
T  38070912 ctcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 38071010  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    || ||| ||||||||||||| |||  |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  38071011 tgtaaagtgcattcaatttgctct-attttcattttctctataatcaactaccaatgaaaattgtttttacatctt 38071085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 317 - 515
Target Start/End: Original strand, 3201331 - 3201530
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||||| || ||| || |    
T  3201331 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 3201430  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataaattaggacggagga 515  Q
    || || || |||||| |||| ||||| | ||||  ||| || ||||||||||||||||||||||  || || |||||||||||||| || ||||||||||    
T  3201431 tccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgatttttgttttttttgcttataatttgggacggagga 3201530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 319 - 514
Target Start/End: Complemental strand, 29524194 - 29523999
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| |||| |||||  ||||  ||||||||| |||||||    |  ||||||| |||| |||||||||||| |||||||| ||||||    
T  29524194 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattc 29524095  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     || || |||||| |||||||| |  |||||  ||| |  ||||||||| |||||||||||| ||    |||||||||||||| ||||||||||||    
T  29524094 caaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgtgatttttgtttttttgcttataatttaggacggagg 29523999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 235 - 371
Target Start/End: Original strand, 32273593 - 32273730
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    |||||||||  ||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| |||| || ||||| ||   ||||||||||| |||    
T  32273593 ttctttgtcctaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatattttccaaaggaaaattaaatgtaaa 32273691  T
Q  333 ttgcattcaatttgttctcctttttattttctccataat 371  Q
     ||||||||||||| |||| |||| |||||||| |||||    
T  32273692 gtgcattcaatttgctctctttttcattttctctataat 32273730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 229 - 371
Target Start/End: Original strand, 44442049 - 44442190
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatg 328  Q
    ||||| ||||||||| |||| |||||| ||||| || ||||||||||  | | |||||||||||| ||| |||| |||||||||||   |||||||||||    
T  44442049 ctcattttctttgtcccaaattataaggaaaaa-gagcaacttttattatttaattatgttttttgaaaaaaattatcttttctaaaggaaaattaaatg 44442147  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataat 371  Q
    |||| ||||||||||||| | || |||| |||||||| |||||    
T  44442148 caaagtgcattcaatttgctatctttttcattttctctataat 44442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 822 - 910
Target Start/End: Original strand, 14732339 - 14732428
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggtt 910  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||  |||||  ||||| ||||||||||||||    
T  14732339 gaaaaggcaaaatattattaaccaacaagcccgtgcgaggtgcactaataagctcgggtgggaaaaaaataatacaaggggaaatcggtt 14732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 317 - 510
Target Start/End: Original strand, 35517128 - 35517321
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| ||||||||||||||||  | || ||| || |    
T  35517128 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttt 35517227  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| ||||||||    
T  35517228 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacg 35517321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 235 - 402
Target Start/End: Original strand, 9709436 - 9709603
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| |||| |||||  ||||||||| |||||||||  ||||  |||||||| ||||||| |||| |||||| | ||   |||||||| ||||||    
T  9709436 ttctttgtcccaaattataataaaaaaagactaacttttatcatatttaattatgttgtttcaaa-aaattatctttaccaaagaaaaattaa-tgcaaa 9709533  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||||||||||||||||||  ||| |||||||| |||||   |||| ||||| |||| |||| |||||||    
T  9709534 ttgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatctt 9709603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 378 - 514
Target Start/End: Original strand, 8701668 - 8701803
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||| |||||||||||| |||||||| |||||| || || |||| | |||| ||| |  |||||  ||| || ||||||||||||||||| |    
T  8701668 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttttcttaataagcg 8701767  T
Q  478 tgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| || || |||||||||||||| || |||||||||    
T  8701768 tgattttgt-ttttttgcttataatttgggacggagg 8701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 319 - 480
Target Start/End: Complemental strand, 9864870 - 9864710
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| ||||||||||  ||||  ||  ||||||||||||||   |  ||||||| |||| ||||||| |||| |||||||| ||||||    
T  9864870 aaattaaatgcaaattacattcaattttatctc--ttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccatgaaacttattc 9864773  T
Q  419 taaggagaacac-ataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
     || || ||||| | |||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  9864772 caaagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 9864710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 826 - 915
Target Start/End: Original strand, 22649068 - 22649158
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccat 915  Q
    ||||||||| |||||||||||||||||||||| ||| | ||||| ||||| |||| |||||||| | | |  |||||||||||||||||||    
T  22649068 cggcaaaattttattaaccaacaagcccgtgcaagaagtactaataagcttgggtagagaaaaaaacaaagaaggggaaatcggttgccat 22649158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 25571941 - 25572025
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttc 311  Q
    ||||| ||||||||| |||||||||||||||||| || ||||||||| |||||  ||  |||||||| ||| |||||||||||||    
T  25571941 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttattctatttaatcttgttttttaaaaaaaatcatcttttc 25572025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 480
Target Start/End: Original strand, 19264104 - 19264268
Alignment:
Q  317 taaaattaaatgcaaa-ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaatta 415  Q
    |||||||||||||||| || ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| ||     
T  19264104 taaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttt 19264203  T
Q  416 ttctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    ||| || || |||||| ||||||||||   ||||  ||| || ||||||||||||||||||||||    
T  19264204 ttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttttcttaataagtgtga 19264268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 480
Target Start/End: Original strand, 12938249 - 12938410
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcc-atgaaaattatt 417  Q
    |||||||||||||||| ||||||  ||  ||||  ||||||||||||||||||   || ||||||| |||| |||||||| |||||| || ||| |||||    
T  12938249 aaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttaca-ctttcctataaaacttatt 12938347  T
Q  418 ctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
      || || | |||| |||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  12938348 tcaaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 12938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 19263996 - 19264042
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  19263996 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 19264042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 378 - 480
Target Start/End: Original strand, 25572111 - 25572213
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||| |||||||||||| |||||||| |||||| || || |||||| |||| ||| |  |||||  ||| |  |||||||||||||||||||    
T  25572111 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtg 25572210  T
Q  478 tga 480  Q
    |||    
T  25572211 tga 25572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 6110427 - 6110387
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  6110427 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 6110387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 29524304 - 29524252
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  29524304 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttattctatt 29524252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 33198898 - 33198846
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| || |||||| |||||    
T  33198898 ctcattttctttgtcccaaaatataagcaaaaaagacaaaattttatcctatt 33198846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 45660259 - 45660311
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| |||||||||||||||||| || ||||||||| |||||    
T  45660259 ctcattttctttgtcccaaaatataagcaaaaaaaacaaacttttatcctatt 45660311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 479
Target Start/End: Complemental strand, 33198783 - 33198624
Alignment:
Q  320 aattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattct 419  Q
    ||||||||||||||| ||||||||||  ||||  ||| |||||||||||||    |||||||| | |||| |||||||||||| | || ||| || || |    
T  33198783 aattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaacttctttt 33198684  T
Q  420 aaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 479  Q
    || || |||||| |||| || |   |||||  |||  | |||||||||||||||||||||    
T  33198683 aaagaaaacacaaaaaactagagtccaaattcttatattttagttttcttaataagtgtg 33198624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 35022967 - 35023069
Alignment:
Q  380 aatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 479  Q
    ||||| |||| |||||||||||| | |||||| ||| || ||  | |||||| ||||||||||  |||||  ||| || |||||||||||||||||||||    
T  35022967 aatgaaaattgtttttacatcttcctatgaaacttactccaaaaa-aacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtg 35023065  T
Q  480 aatt 483  Q
    ||||    
T  35023066 aatt 35023069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 514
Target Start/End: Complemental strand, 40808811 - 40808675
Alignment:
Q  380 aatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 479  Q
    ||||| |||| |||||||||||| |||||||| |||||| || || |||||| |||| ||| |  |||||  ||| |  |||||||||||||||||||||    
T  40808811 aatgaaaattgtttttacatctt-ccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtg 40808713  T
Q  480 aatt---agtgttttttgcttataaattaggacggagg 514  Q
    | ||     | |||||||||||||| ||||||||||||    
T  40808712 atttttgttttttttttgcttataatttaggacggagg 40808675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 311
Target Start/End: Complemental strand, 40808970 - 40808892
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttc 311  Q
    ||||||||| ||||||||||||||||||||| || |||||| |||||  ||   ||||||| ||| |||||||||||||    
T  40808970 ttctttgtcccaaaatataagcaaaaaagacaaatttttattctatttaatctcgttttttaaaaaaaatcatcttttc 40808892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 882
Target Start/End: Original strand, 41378216 - 41378263
Alignment:
Q  836 ttattaaccaacaagcccgtg-cagatgcactaacaagctcgggtgga 882  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||    
T  41378216 ttattaaccaacaagcccgtgaaagatgcactaataagctcgggtgga 41378263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 479
Target Start/End: Original strand, 4707484 - 4707585
Alignment:
Q  375 taaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataa 474  Q
    |||||||||| |||| |||| ||||||| || | ||| |||||||||||| |||||| |||| |||||  ||||||||   || ||||| ||||||||||    
T  4707484 taaccaatgaaaattgttttaacatcttcccgttaaacttattctaaggaaaacacaaaaaactatactccaaatcat---gttttagtgttcttaataa 4707580  T
Q  475 gtgtg 479  Q
     ||||    
T  4707581 atgtg 4707585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 5280738 - 5280692
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||||||| ||||||||||||||||||||| || |||||| |||||    
T  5280738 ttctttgtcccaaaatataagcaaaaaagacaaatttttatcctatt 5280692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 319 - 417
Target Start/End: Complemental strand, 30830749 - 30830651
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||||||||||||||| ||| ||||||  |||| |||| |||||||| |||||   |||||||||| | || |||||| |||||  ||||||| |||||    
T  30830749 aaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcatgaaacttatt 30830651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 45660370 - 45660569
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| |||| |||||  ||||  ||| |||||||||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  45660370 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 45660469  T
Q  417 tctaaggagaacacataaaattatacctcaaatca---ttaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    |  || || |||||| |||| |||||  ||||| |   ||| || |||||||||||||||| |||| |||  | |||||||||| ||| || ||||||||    
T  45660470 ttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataaatgtg-attttttttttttgcttttaatttgggacggag 45660568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 431
Target Start/End: Complemental strand, 921735 - 921587
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||||||||||| |||| || ||||||||    |||||||||||||  |||||||| | ||   ||| ||| |||||||| ||||||  ||| |||    
T  921735 attatgttttttcaaa-aaataatattttctaaaaagaaattaaatgcaatatgcattcattatgccatccctttcattttctctataattaataatcaa 921637  T
Q  382 tgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    | | ||||||||||| ||||||  |||||| |||||| ||| | ||||||    
T  921636 taaaaattatttttaaatctttttatgaaacttattcaaagaataacaca 921587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 402
Target Start/End: Complemental strand, 8032823 - 8032738
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctc-ctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||||||||||||| ||||||||||||| |||| | ||| |||||||| |||| |   ||||||| | |||| ||||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatctt 8032738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 41528193 - 41528230
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  41528193 tttgtcccaaaatataagcaaaaaagacaaacttttat 41528230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 43415468 - 43415569
Alignment:
Q  379 caatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgt 478  Q
    |||||| |||| |||||||||||| | || ||| || || ||| || |||||| |||||||||| ||||||  |||  | |||||||||||| |||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttagtaagtgt 43415567  T
Q  479 ga 480  Q
    ||    
T  43415568 ga 43415569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 35181103 - 35181389
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  35181103 tctcatattctttgtctcagaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 35181202  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  35181203 gcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 35181302  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35181303 cacaaaaaattatacctcaaatcagtaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 35181389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 43108109 - 43107822
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||||    
T  43108109 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 43108010  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  43108009 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggaga 43107910  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43107909 acacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaattaggacggagg 43107822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 231 - 514
Target Start/End: Original strand, 23106366 - 23106650
Alignment:
Q  231 catattctttgtctcaaaatataagcaaaaaa-gaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  23106366 catattatttgtctcaaaatataagcaaaaaaagactaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 23106465  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  23106466 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattttaaggagaaca 23106565  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  23106566 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaattaagacggagg 23106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 235 - 514
Target Start/End: Original strand, 47383324 - 47383603
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  47383324 ttctttgtctcaaaatataagcaaaaaataccaacttttatgatattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgtaaatt 47383423  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||    
T  47383424 gcattcaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattttaaggagaacacaaaa 47383523  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  47383524 aattatatctcaaatcattaagtgttagttttcttaatatgtgtgaatttgtgttttttgcttataaattaggacggagg 47383603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 230 - 514
Target Start/End: Original strand, 3157349 - 3157633
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  3157349 tcattttccttgtctcaaaatataagcaaaaaagactaacttttatgctattattatgtattttcaaacaaatcatcttttccaatgtaaaattaaatgc 3157448  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||||||    
T  3157449 aagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaagagaaca 3157548  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3157549 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtatgaattagtgttttttgcttataaattaggacggagg 3157633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 230 - 513
Target Start/End: Complemental strand, 19933256 - 19932973
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  19933256 tcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 19933157  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  19933156 aagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaaggagaaca 19933057  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    || ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19933056 caaaaaatcatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 19932973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 230 - 514
Target Start/End: Original strand, 41889084 - 41889368
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| || ||    
T  41889084 tcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgccattattatgttttttcaaacaaatcatcttttccaatgtaaaattcaaagc 41889183  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |    
T  41889184 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaata 41889283  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  41889284 caaaaaattatacatcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaattagaacggagg 41889368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 42617582 - 42617869
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||  ||| |||||||||||    
T  42617582 tctcatattctttttctcaaaatataagcaaaaaagacaaactcttatgatattattatgttttttcaaacaaattatttttttcaatgtaaaattaaat 42617681  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  42617682 gcaaattgcattcaatttgtgctcctttttattttctccataatttttaaccaattagaattatttttacatctttccatgaaacttattccaaggagaa 42617781  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  42617782 cacaaaaaattatacctcaaatcattaagtgttagtttttttaataagtgtgaattagtgtttttttgcttataaattaggacggagg 42617869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 21654324 - 21654038
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  21654324 tctcataatctttgtctcaaaatataaacaaaaaggaccaacttttatgctattattatgttttttcaaacaaatcaccttttccaatgtaaaattaaat 21654225  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  21654224 gcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 21654125  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||| ||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21654124 cacaaaaaatgatatctcaagtcactaagtattagttttcttaataagtgtgaattagtgttttttgcttataaattagaacggagg 21654038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 228 - 512
Target Start/End: Original strand, 48879299 - 48879583
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| ||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||||||||||    
T  48879299 tctcatattttttatcttaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaaaaaaatcatctttttcaatgtaaaattaaat 48879398  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||| ||||||||    
T  48879399 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctataaaacttattccaaggagaa 48879498  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  48879499 tacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtaaattagtgttttttgcttataaattagaacgga 48879583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 228 - 515
Target Start/End: Original strand, 44600357 - 44600644
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | | |||||||||||    
T  44600357 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaataaatcatcttttccagtgtaaaattaaat 44600456  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  44600457 gcaagttgcattcaatttgttctcttttttgttttctccataatttttaaccaatgaaaattatttttacatctttccttgaaacttattctaaggagaa 44600556  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  44600557 cacaaaaaattatacctcaaatcgctaagtgttagttttcttaataaatgtgaattagtattttttgcttataaattagaacggagga 44600644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 228 - 506
Target Start/End: Complemental strand, 41815896 - 41815618
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||    
T  41815896 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcatattttccaatgtaaaattaaat 41815797  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  41815796 gtaagttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaacttattccaaggagaa 41815697  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 506  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  41815696 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtcaattattattttttgcttataaattag 41815618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 240 - 512
Target Start/End: Original strand, 40583068 - 40583341
Alignment:
Q  240 tgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcatt 339  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  40583068 tgtctcaaaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcatt 40583167  T
Q  340 caatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaatta 439  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||||||| |||||||    
T  40583168 caatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccagaaaatttattccaaggagaacacaaaaaatta 40583267  T
Q  440 tacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtt-ttttgcttataaattaggacgga 512  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40583268 tacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttattttgcttataaattaggacgga 40583341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 228 - 512
Target Start/End: Original strand, 45598815 - 45599102
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  45598815 tctcatgttctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 45598914  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||    
T  45598915 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggaaaa 45599014  T
Q  428 cac-ataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta--gtgttttttgcttataaattaggacgga 512  Q
     || | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||  || ||||||| |||||||||||||||||    
T  45599015 tacaaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgcgaattactgttttttttgtttataaattaggacgga 45599102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 247 - 512
Target Start/End: Complemental strand, 22111514 - 22111248
Alignment:
Q  247 aaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttg 346  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||     
T  22111514 aaatataagcaaaaaataccaacttttatgttattattatgttttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattgcattcaattta 22111415  T
Q  347 ttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctca 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||||||||||| ||||||||||||||    
T  22111414 ttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccagaaaatttattccaaggagaacacaaaaaattatacctca 22111315  T
Q  447 aatcattaagtgttagttttcttaataagtgtgaattagtgtt-ttttgcttataaattaggacgga 512  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22111314 aatcactaagtgttagttttcttaataagtgtgaattagtgttattttgcttataaattaggacgga 22111248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 235 - 513
Target Start/End: Complemental strand, 32491302 - 32491025
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  32491302 ttctttgtctgaaaatataagcaaaaaaaaccaacttttatgctatt-ttatgttttttcaaacaaatcatcttttcgaatgtaaaattaaatgcaagtt 32491204  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| ||    
T  32491203 gcatttaatttgttctcctttttgttttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattataaggagaacacaaaa 32491104  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    |||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  32491103 aattatacatcaaatcaccaagtgttagttttcttaataaatgtgaattagtgttttttgcttataaattaggatggag 32491025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 235 - 514
Target Start/End: Original strand, 40560300 - 40560579
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||||||||||||| ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  40560300 ttctttgtctcaaaatataatcaaaaaagacccatttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 40560399  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||  |||||||||||| ||    
T  40560400 gcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctataaaacttatttcaaggagaacacaaaa 40560499  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  40560500 aattatacctcaaattattaagtgttagtttttttaataagtgtaaattaatgttttttgcttataaattaggacggagg 40560579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 228 - 486
Target Start/End: Original strand, 36576329 - 36576585
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  36576329 tctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgctattattatgttttttcaaataaatcatcttttccaatgtaaaattaaat 36576428  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  36576429 gcaagttgcattcaatttgttctcctttttgttttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattctaaggagaa 36576528  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagt 486  Q
     ||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  36576529 -acaaaaaattatacctcaaatcactaagtgttagttttctt-ataagtgtgaattagt 36576585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 228 - 482
Target Start/End: Original strand, 34808130 - 34808384
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||  |||||||||||    
T  34808130 tctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatctttttcaacgtaaaattaaat 34808229  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||| ||| ||||    
T  34808230 gcaaattgcattcaatttgttcacctttttattttctccataatttttaaccaataagaattatttttacatctttccatgaaactttttccaagaagaa 34808329  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaat 482  Q
    |||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  34808330 cacaaaaaattatacctcaaatcactaagtattagttttcttactaagtgtgaat 34808384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 240 - 514
Target Start/End: Original strand, 23731483 - 23731759
Alignment:
Q  240 tgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcatt 339  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  23731483 tgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttgcatt 23731582  T
Q  340 caatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaatta 439  Q
     ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||| |    
T  23731583 taatttgttctcctttttattttctccataatttttaatcaacgagaattatttttacatctctccatgaaacttattccaaggagaacacaaaaaatca 23731682  T
Q  440 tacctcaaatcattaagtgt--tagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| |||||||| |||||||  ||||||||||||||| |||||||||| |||||||  |||||||||||||||||||    
T  23731683 tacatcaaatcactaagtgttatagttttcttaataaatgtgaattagcgttttttttttataaattaggacggagg 23731759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 18206509 - 18206236
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||           |||||||||||||||||||||||  ||| |||||||||||||    
T  18206509 tcattttctttgtctcaaaatataagcaaaaaaaaccatcttttatg-----------ttttttcaaacaaatcatctttttcaatgtaaaattaaatgc 18206421  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18206420 aagttgtatttaatttgttctcctttttattttttccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaaca 18206321  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18206320 caaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 18206236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 230 - 474
Target Start/End: Complemental strand, 19964395 - 19964151
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  19964395 tcattttctttatctcaaaatataagcaaaaaagataaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 19964296  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  19964295 aagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaaggagaaca 19964196  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataa 474  Q
    || ||||| ||||||||||||| ||||||||||||||||||||||    
T  19964195 caaaaaatcatacctcaaatcactaagtgttagttttcttaataa 19964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 48938088 - 48937807
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaatg 328  Q
    ||||||||||||||| ||||||||||||||||    |||||||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||     
T  48938088 tcatattctttgtcttaaaatataagcaaaaat---caacttttgtgctattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaata 48937992  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaac 428  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||    
T  48937991 caaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatttttacatctttccataaaacttattccaaggagaac 48937892  T
Q  429 acataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||||||||||||| || || |||||||  ||||||||||||||| |||||| |||||||||| |||||||||| ||||||||    
T  48937891 acaaaaaattatacctc-aaccactaagtgtatgttttcttaataagtatgaatttgtgttttttgtttataaattaagacggagg 48937807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 228 - 513
Target Start/End: Complemental strand, 41890463 - 41890162
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatg------------------ttttttcaaacaaatcatcttt 309  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||                  ||||||||||||||||||||||    
T  41890463 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgctattattatggtgaacgtattattatgtttttttcaaacaaatcatcttt 41890364  T
Q  310 tctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatga 409  Q
    | |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  41890363 tttaatgtaaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaattaatgagaattattttta-atctttccatga 41890265  T
Q  410 aaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggac 509  Q
    || |||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  41890264 aacttatttcaaggagaacacaaaaaattataccccaaatcattaaatgttagttttcttaataagtttgaattagtgtttttt-cttataaattaggac 41890166  T
Q  510 ggag 513  Q
    ||||    
T  41890165 ggag 41890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 9818392 - 9818665
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||| ||| |||||||||||    
T  9818392 tctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttt--tttttcaaacaaatcatcttttccaatgtaaaattaaat 9818489  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    || |           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  9818490 gcca-----------tttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaacttattccaaggagaa 9818578  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || | ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  9818579 cataaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattagtgtttttgacttataaattacgacggagg 9818665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 10720317 - 10720590
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||| ||| |||||||||||    
T  10720317 tctcattttctttttctcaaaatataagcaaaaaagaccaacttttatgttattatttt--tttttcaaacaaatcatcttttccaatgtaaaattaaat 10720414  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    || |           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  10720415 gcca-----------tttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaacttattccaaggagaa 10720503  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || | ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  10720504 cataaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattagtgtttttgacttataaattacgacggagg 10720590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 7989493 - 7989224
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| || ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||                  | |||||||||||    
T  7989493 tctcattttatttgtttcaaaatataagtaaaaaagaccaacttttatgttattattatgttttttcaa------------------tgtaaaattaaat 7989412  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  7989411 gcaagttgcattcaatttgttatcctttttattttcttcataatttttaaccaatgagaattatttttacatctttccatgaaatttattccaaggagaa 7989312  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| |||||||| ||| |||||||    
T  7989311 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgtttttttacttataaaatagaacggagg 7989224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 230 - 404
Target Start/End: Complemental strand, 48943114 - 48942942
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaatg 328  Q
    ||||||||||||||| ||||||||||||||||    |||||||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||     
T  48943114 tcatattctttgtcttaaaatataagcaaaaat---caacttttgtgctattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaata 48943018  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttc 404  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48943017 caaattgcattcaatttgttctactttttattttctccataatttttaaccaataagaattatttttacatctttc 48942942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 291 - 515
Target Start/End: Original strand, 33153013 - 33153237
Alignment:
Q  291 tttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaatta 390  Q
    ||||||| |||| |||||||  ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||     
T  33153013 tttcaaaaaaattatctttttcaaagtaaaattaaatgcaaattgcattcaatttgttctcctttctattttctccataatcattaaccaataagaattg 33153112  T
Q  391 tttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttt 490  Q
    ||||||||||||||||| ||| |||||  ||| |||||||| |||||||||| |||||  |||| || || ||||| ||||||||||||||||  | |||    
T  33153113 tttttacatctttccataaaatttatttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgtgaatttatattt 33153212  T
Q  491 tttgcttataaattaggacggagga 515  Q
    ||| |||||||||| ||||||||||    
T  33153213 tttacttataaattgggacggagga 33153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 279 - 514
Target Start/End: Complemental strand, 35084253 - 35084017
Alignment:
Q  279 attattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaac 378  Q
    |||||||||||| |||| | |||||||| |||| ||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||| |    
T  35084253 attattatgtttcttcataaaaatcatcctttccaaagtaaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatc 35084154  T
Q  379 caatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgt 478  Q
    |||| |||||| |||||||||||||  |||||| |||||  ||| |||||||| |||| |||| ||||||| | |  || |||||||||||| |||||||    
T  35084153 caataagaattgtttttacatctttttatgaaacttatttcaagaagaacacaaaaaactataactcaaattactgtgttttagttttcttattaagtgt 35084054  T
Q  479 gaattagtg-ttttttgcttataaattaggacggagg 514  Q
    ||||| ||| ||||||||||||||||| |||||||||    
T  35084053 gaatttgtgtttttttgcttataaattgggacggagg 35084017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 228 - 509
Target Start/End: Original strand, 30082275 - 30082543
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||           ||||| ||||||||||||| ||  |||||||||||    
T  30082275 tctcattttctttgtcccaaaatataagcaaaaaagaccaatttttatgttatt-----------tcaaaaaaatcatcttttccaaagtaaaattaaat 30082363  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||| ||||| ||| |||| ||||||||||  ||||||||| |||||| ||||||||||||| ||  ||| |||||  ||| | ||    
T  30082364 gcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacatcttttcagaaaacttatttcaagaataa 30082463  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggac 509  Q
    |||  ||||||||||||||||  | || || || |||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  30082464 cac--aaaattatacctcaaactactatgtttttgttttcttaataagtgtgaatttgtgttttttgcctataaattgggac 30082543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 245 - 514
Target Start/End: Complemental strand, 29236242 - 29235986
Alignment:
Q  245 caaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatt 344  Q
    ||||||||||||||||||||||||||||           |||||| ||||||| ||||||||||||   |  |||||||||||  |||||||||||||||    
T  29236242 caaaatataagcaaaaaagaccaacttt-----------tatgttatttcaaaaaaatcatcttttacgaagtaaaattaaatataaattgcattcaatt 29236154  T
Q  345 tgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacct 444  Q
    | |||||||||||||| ||||||||||  ||||||||| | |||| |||||| || |||| |||||| |||||| ||  |||| ||| ||||||||||||    
T  29236153 t-ttctcctttttattctctccataatcattaaccaataaaaattgtttttatatatttctatgaaacttattccaaaaagaatacaaaaaattatacct 29236055  T
Q  445 caaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||  | || || ||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  29236054 caaactactatgt-ttcattttcttaatgagtgtgaatttgtgttttttgcttataaattaggacggagg 29235986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 236 - 371
Target Start/End: Original strand, 39348708 - 39348843
Alignment:
Q  236 tctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattg 335  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||| || | |||||||| ||  |||||||||||||||||||    
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttatgctattattgtgttgtttcaaaaaattaatcttttccaaagtaaaattaaatgcaaattg 39348807  T
Q  336 cattcaatttgttctcctttttattttctccataat 371  Q
     ||||||||||||||||||| ||||||||| |||||    
T  39348808 tattcaatttgttctcctttctattttctcgataat 39348843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 235 - 371
Target Start/End: Original strand, 39337445 - 39337584
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaa---tcatcttttctaatctaaaattaaatgcaa 331  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||   |||||||||| ||  ||||| |||||||||    
T  39337445 ttctttgtcccaaaatataagcaaaaaataccaacttttatgctattattgtgttgtttcaaaaaaaaaatcatcttttccaaattaaaactaaatgcaa 39337544  T
Q  332 attgcattcaatttgttctcctttttattttctccataat 371  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  39337545 attgcattcaaattgttctcctttctattttctccataat 39337584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 317 - 504
Target Start/End: Original strand, 28608373 - 28608560
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||  || |||||| |||||| ||||||||||||| ||||||| ||||    
T  28608373 taaaattaaatgcaaattgcattcaatttgttctcttttctattctctccataataattgaccaataagaattgtttttacatcttttcatgaaacttat 28608472  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaatt 504  Q
    |  ||| ||| || | |||||||||| || ||  | || || || |||||||||| || |||||||| || |||||| ||||||||||    
T  28608473 ttcaagaagaccataaaaaattatacttctaactactatgtttttgttttcttaaaaaatgtgaatttgtatttttttcttataaatt 28608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 826 - 953
Target Start/End: Original strand, 46691848 - 46691983
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggag---aaaaataaataccaggggaaatcggttgc--catatac 919  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||   ||||||| |||| ||||||||||||||||  |||| ||    
T  46691848 cggcaaaatattattaaccaacaagcccgtgcaagaagcactaacaagctcgggtggagaaaaaaaatacatacaaggggaaatcggttgccacataaac 46691947  T
Q  920 accggctcg-acaaaaacccctt-aaaaccacccca 953  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  46691948 accggctcgaacaaaaaccccttaaaaaccacccca 46691983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 321 - 514
Target Start/End: Original strand, 40593822 - 40594015
Alignment:
Q  321 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattcta 420  Q
    |||||||| |||||||||| ||||| |||| ||||||||| | ||| ||||  ||||||||| |||||| |||||||||||||  ||||||  |||||||    
T  40593822 attaaatgtaaattgcatttaatttattctactttttattctatccgtaatcattaaccaataagaattgtttttacatctttttatgaaacatattcta 40593921  T
Q  421 aggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |  | || ||| ||||||||| |||||| ||  | || ||  |||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  40593922 ataaaaatacaaaaaattatatctcaaaccaccatgttttttttttcttaataaatgtgaatttgtattttttgcttataaattaggacggagg 40594015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 18800966 - 18800686
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||| |||||||||||||||||||||  ||||||||| ||||           ||||  ||||||||||||  ||  |||||||||||    
T  18800966 tctcattttctttgtcccaaaatataagcaaaaaagacatacttttatgttatt-----------tcaagaaaatcatctttttcaaagtaaaattaaat 18800878  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataat--tt-----ttaaccaatgagaattatttttacatctttccatgaaaattattcta 420  Q
    | ||||||||||||||||| |||  ||| ||||  |||||||||  ||     ||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  18800877 gtaaattgcattcaatttgctcttatttctattccctccataatcattaatcattaaccaataagaattgtttttacatctttccatgaaatttattcta 18800778  T
Q  421 aggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    || | || ||| || |||||  ||||||  | ||  | ||  ||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  18800777 agaaaaatacaaaatattatgtctcaaactactatatttttattttcttaataagtgtgaatttgtattttttgcttataaattgggacgga 18800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 822 - 914
Target Start/End: Original strand, 30655597 - 30655691
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg-agaaaaataaataccaggggaaatcggttgcca 914  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| | ||||||| | || ||||||||||||||||||    
T  30655597 gaaacggcaaaatattattaaccaacaagcccgtgcaagacgcactaataagctcgggtggaaaaaaaatacaaacaaggggaaatcggttgcca 30655691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 828 - 945
Target Start/End: Original strand, 36615808 - 36615926
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccatatacaccggct 926  Q
    |||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||| || |||||||||||||||||| | || || |||    
T  36615808 gcaaaatattattacccaacaagcccgtgcaagaagcactaataagctcgggtggaaaaaaacaaa-acaaggggaaatcggttgccacaaactccagct 36615906  T
Q  927 cg-acaaaaaccccttaaaa 945  Q
    || |||||||||| ||||||    
T  36615907 cgaacaaaaaccctttaaaa 36615926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 25737782 - 25737585
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  25737782 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 25737683  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| |||| |||||| |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| || |||||||||    
T  25737682 tccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggagg 25737585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 245 - 371
Target Start/End: Complemental strand, 31769189 - 31769063
Alignment:
Q  245 caaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaa 342  Q
    |||| |||||||||||| |||||||||||||  ||||  |||||||||||||||| | || |||||||| ||   ||||||||||||||| |||||||||    
T  31769189 caaattataagcaaaaa-gaccaacttttatcatatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaatgcaaagtgcattcaa 31769092  T
Q  343 tttgttctcctttttattttctccataat 371  Q
    |||| |||| ||||||||||||| |||||    
T  31769091 tttgctctcatttttattttctctataat 31769063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 238 - 440
Target Start/End: Complemental strand, 35888203 - 35888001
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattg 335  Q
    |||||| |||| |||||| |||||||||||||||| ||  ||||  |||||||||||||||| |||| |||||||| ||   ||||| ||||||||| ||    
T  35888203 tttgtcccaaattataag-aaaaaagaccaactttcatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaataaaatgcaaagtg 35888106  T
Q  336 cattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaa 435  Q
    ||||||||||| |||| ||||||||||||| |||||     || ||||| |||| |||||||||||| | || ||| |||||  || || |||||| |||    
T  35888105 cattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatttcaaagataacacaaaaa 35888006  T
Q  436 attat 440  Q
    |||||    
T  35888005 attat 35888001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 229 - 417
Target Start/End: Original strand, 38260231 - 38260421
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaactttt-atgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaa 325  Q
    ||||| ||||||||| |||| |||||| |||||| || ||||||| ||| ||||  ||||| || ||||||| |||| |||||||| ||   ||||||||    
T  38260231 ctcattttctttgtcccaaattataagtaaaaaatacaaactttttatgatatttaattatattgtttcaaa-aaattatcttttccaaatgaaaattaa 38260329  T
Q  326 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    ||||||| |||||| |||||| ||||  ||| |||||||| |||||   |||||||||| ||||||||||||| ||||| || ||| |||||    
T  38260330 atgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 35923257 - 35923453
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||||| || ||| || |    
T  35923257 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttt 35923356  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||| ||||||| ||||||||||||    
T  35923357 tccaaagaaaacaca-aaaactatactccaaatttttatgttttagttttcttaataagtgtgatttttatttttttacttataatttaggacggagg 35923453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 823 - 945
Target Start/End: Original strand, 1039063 - 1039190
Alignment:
Q  823 aaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataa-ataccaggggaaatcggttgccatataca 920  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||||| ||||| || | || |||| ||||||||||| ||| | |    
T  1039063 aaacggcaaaatattattaaccgacaagcccgtgcaagaagcactaataagctcgggtggataaaaaaaacaaacaagggaaaatcggttgcaatacaaa 1039162  T
Q  921 c--cggctcg-acaaaaaccccttaaaa 945  Q
    |   |||||| |||||||||||||||||    
T  1039163 ctttggctcgaacaaaaaccccttaaaa 1039190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 317 - 480
Target Start/End: Complemental strand, 4910788 - 4910627
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| ||||||||   || ||||||| ||||||||||||||||| | || ||| || |    
T  4910788 taaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactttt 4910689  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    |||||  |||| ||| |||| ||||| ||||||  ||| || |||||||| | |||||||||||    
T  4910688 tctaa--agaaaacacaaaaatatacttcaaattcttatgttttagttttttaaataagtgtga 4910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 317 - 501
Target Start/End: Original strand, 45485960 - 45486144
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| ||||||||||||||||| | || ||| || |    
T  45485960 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttt 45486059  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataa 501  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    ||||||||||||||    
T  45486060 tccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatttttgtttttttgcttataa 45486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 48339389 - 48339245
Alignment:
Q  304 atcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttt 403  Q
    |||||||| || ||||||||||||||||| |||||| ||||| |||| |||| |||||||||||||||   | ||  || ||||||| |||||||| |||    
T  48339389 atcttttccaaactaaaattaaatgcaaactgcatttaatttattcttctttctattttctccataatcaatcacagataagaattacttttacattttt 48339290  T
Q  404 ccatgaaaattattctaaggagaacacataaaattatacctcaaa 448  Q
     || |||| |||||| ||  |||||||  |||| |||||||||||    
T  48339289 tcaagaaacttattccaataagaacacgcaaaactatacctcaaa 48339245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 399
Target Start/End: Original strand, 22369148 - 22369313
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    |||||||| ||||| |||||| |||||| || |||||||||  ||||  |||||||||||||||| ||||||||||||| ||    |||||||||||||     
T  22369148 ttctttgtatcaaattataagaaaaaaaaactaacttttatcatatttaattatgttttttcaaa-aaatcatcttttcaaaggagaaattaaatgcaat 22369246  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacat 399  Q
    ||||||||| | || ||||  ||| ||||| || |||| |  |||||||| | ||||||||||||||    
T  22369247 ttgcattcattatgctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 826 - 941
Target Start/End: Original strand, 31424775 - 31424896
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataa-ataccaggggaaatcggttgccat---ataca 920  Q
    |||||||||||||||||||||||| ||||||| |||  |||||| ||||| ||||||||||||| || | |  |||||||||||||||||||   | |||    
T  31424775 cggcaaaatattattaaccaacaaacccgtgcaagaaacactaataagcttgggtggagaaaaaaaacaaagaaggggaaatcggttgccattcgaaaca 31424874  T
Q  921 ccggctcga-caaaaacccctt 941  Q
    ||||||||| ||||||||||||    
T  31424875 ccggctcgatcaaaaacccctt 31424896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 832 - 945
Target Start/End: Original strand, 49035862 - 49035982
Alignment:
Q  832 aatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaa---taaataccaggggaaatcggttgc--catatacaccggc 925  Q
    ||||||||||||||||||| |||| || || ||||||| |||||||||||||||||||   || | || ||||||||||||||||  |||| |||||||     
T  49035862 aatattattaaccaacaagtccgtacaagaagcactaataagctcgggtggagaaaaaaattacaaacaaggggaaatcggttgccacataaacaccggt 49035961  T
Q  926 tcg-acaaaaaccccttaaaa 945  Q
    ||| |||||||||||||||||    
T  49035962 tcgaacaaaaaccccttaaaa 49035982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 823 - 888
Target Start/End: Complemental strand, 42598118 - 42598052
Alignment:
Q  823 aaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||| |||||||||||||    
T  42598118 aaacggcaaaatattattaaccaacaaacccgtgcaagaagcactaataagcttgggtggagaaaaa 42598052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 18102535 - 18102732
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||   |||  ||| ||||| |||||||    |  ||||||| |||| |||||||||||| | || ||| || |    
T  18102535 taaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 18102634  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |  || || |||||| ||||||||||  |||||  ||| || |||||||||||||||||||||| ||  | |||||||||||||| || |||| ||||    
T  18102635 ttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgatttttttttttttgcttataatttgggacagagg 18102732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 480
Target Start/End: Original strand, 47779611 - 47779772
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| |||| |||||  |||   ||||||||| |||||||    |  ||||||| |||| |||||||||||| |||||||| ||||||    
T  47779611 aaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccatgaaacttattc 47779710  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    ||| || |||||| |||| ||| |  |||||  ||| |  ||||||||||||||||||||||    
T  47779711 taaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtga 47779772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 25944581 - 25944779
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||||||||| |||||||    |  ||||||| |||| |||||||||||| | || ||| || |    
T  25944581 taaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttt 25944680  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| ||| ||||||  |||||  |||  | |||||||||||||||||||| |  ||  | |||||||||||||| |||| |||||||    
T  25944681 tccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataagtgttattttttttttttttgcttataatttagaacggagg 25944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 402
Target Start/End: Original strand, 39170457 - 39170624
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    |||||||||||||| ||||| ||||||| | ||||||||||  ||||  |||||||| || |||| |||| |||||||| ||   |||||||||||||||    
T  39170457 ttctttgtctcaaattataaacaaaaaatatcaacttttattatatttaattatgttgttacaaa-aaattatcttttcaaaag-aaaattaaatgcaaa 39170554  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
     ||||||||||||| | ||  ||| |||||||| |||||   | || ||||| |||| ||||||||||||    
T  39170555 gtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatctt 39170624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 829 - 945
Target Start/End: Complemental strand, 41702992 - 41702871
Alignment:
Q  829 caaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataa-ataccaggggaaatcggttgc--catatacaccgg 924  Q
    ||||||||||| ||||||| ||||||||| ||  ||||||| ||| | ||||||||||||| || |||| ||||||| ||||||||  || | |||||||    
T  41702992 caaaatattatcaaccaactagcccgtgcaaggagcactaataagtttgggtggagaaaaaaaacatacaaggggaagtcggttgccgcacaaacaccgg 41702893  T
Q  925 ctcg-acaaaaaccccttaaaa 945  Q
    |||| |||||||||||||||||    
T  41702892 ctcgaacaaaaaccccttaaaa 41702871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 46760412 - 46760215
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| |||||||| |  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  46760412 taaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 46760313  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |  || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| || |||||||||    
T  46760312 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggagg 46760215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 515
Target Start/End: Complemental strand, 2633418 - 2633295
Alignment:
Q  391 tttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttt 490  Q
    |||||||||||| |  | ||| ||||| ||||||||||||  ||| || ||||| |||| |||| || |||||||||||||||| |||||||| || |||    
T  2633418 tttttacatcttcctgtaaaatttattttaaggagaacaccaaaagttttacctaaaattattatgttttagttttcttaataaatgtgaattggt-ttt 2633320  T
Q  491 tttgcttataaattaggacggagga 515  Q
    ||| ||||||| || ||| ||||||    
T  2633319 ttttcttataatttgggatggagga 2633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 317 - 480
Target Start/End: Original strand, 6191050 - 6191213
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||| ||||| |||| |||||  ||||  ||| |||||||||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  6191050 taaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 6191149  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    |  || || |||||| |||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  6191150 ttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 6191213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 830 - 888
Target Start/End: Complemental strand, 22197797 - 22197738
Alignment:
Q  830 aaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||||||||||||||| |||||| || |||||||| ||||||||||||| |||||    
T  22197797 aaaatattattaaccaacaagtccgtgcaaggtgcactaaaaagctcgggtggaaaaaaa 22197738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 830 - 888
Target Start/End: Original strand, 22240024 - 22240083
Alignment:
Q  830 aaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||||||||||||||| |||||| || |||||||| ||||||||||||| |||||    
T  22240024 aaaatattattaaccaacaagtccgtgcaaggtgcactaaaaagctcgggtggaaaaaaa 22240083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 480
Target Start/End: Complemental strand, 19912922 - 19912761
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    |||||||||| |||| ||||||||| || | || ||| || |||    
T  19912922 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttc 19912823  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
     || || |||||| |||| |||||  |||||  ||| || |||||||||||||||| |||||    
T  19912822 caaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 19912761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 25944474 - 25944519
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||    
T  25944474 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 25944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 29713235 - 29713360
Alignment:
Q  358 attttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagt 457  Q
    |||||||| ||||||  || ||||||| |||| |||||||| ||||| |||||| ||||||||| ||  |||||  ||| |||||  ||||  || | ||    
T  29713235 attttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattctaaagatgacacaagaaactatactacaaacaatgatgt 29713334  T
Q  458 gttagttttcttaataagtgtgaatt 483  Q
     |||||||||||||||| ||||||||    
T  29713335 cttagttttcttaataaatgtgaatt 29713360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 945
Target Start/End: Complemental strand, 33320825 - 33320711
Alignment:
Q  831 aaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcc--atatacaccggctc 927  Q
    ||||||| ||||||||||||||||||| ||| ||||||| |||||||||||| ||||   ||| || ||||||||| |||||||  | | ||||||||||    
T  33320825 aaatattgttaaccaacaagcccgtgcaagaagcactaataagctcgggtgg-gaaa---aaaaacaaggggaaattggttgccttacaaacaccggctc 33320730  T
Q  928 g-acaaaaaccccttaaaa 945  Q
    | |||||| ||||||||||    
T  33320729 gaacaaaacccccttaaaa 33320711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 47557973 - 47557932
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatg 276  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  47557973 ttctttgtcccaaaatataagcaaaaaagacaaacttttatg 47557932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 18102463 - 18102503
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  18102463 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 18102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 24151817 - 24151777
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  24151817 ttctttgtcccaaattataagcaaaaaagaccaacttttat 24151777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 47778669 - 47778721
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| || |||||| |||||    
T  47778669 ctcattttctttgtcccaaaatataagcaaaaaagacaaatttttattctatt 47778721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 830 - 888
Target Start/End: Original strand, 19471096 - 19471155
Alignment:
Q  830 aaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||||||| ||||||||| |||| || |||||||| ||||||||||||| |||||    
T  19471096 aaaatattattaagcaacaagccggtgcaaggtgcactaataagctcgggtggaaaaaaa 19471155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 417
Target Start/End: Original strand, 15995782 - 15995824
Alignment:
Q  375 taaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||||||||  |||||||||||||||||||||||||| |||||    
T  15995782 taaccaatggaaattatttttacatctttccatgaaacttatt 15995824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 380 - 501
Target Start/End: Original strand, 16917539 - 16917661
Alignment:
Q  380 aatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 479  Q
    ||||| |||| |||||||||||| |||||||| |||||| || || || ||| ||  |||||  ||||||  ||| || ||| |||||||||||||||||    
T  16917539 aatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgttttaattttcttaataagtgtg 16917638  T
Q  480 a-attagtgttttttgcttataa 501  Q
    |  ||||| ||||||||| ||||    
T  16917639 attttagttttttttgctaataa 16917661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 823 - 876
Target Start/End: Complemental strand, 32679077 - 32679023
Alignment:
Q  823 aaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcg 876  Q
    ||||||| |||| |||||||||||||||||||||| ||| ||||||| |||||||    
T  32679077 aaacggctaaattttattaaccaacaagcccgtgcaagacgcactaataagctcg 32679023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 28843653 - 28843552
Alignment:
Q  294 caaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt 393  Q
    |||| ||||||||||||| ||  |||||||||||  ||||| |||| |||||  ||| |||| |||| ||||||||||  |||| |||| |||||| |||    
T  28843653 caaaaaaatcatcttttccaaaataaaattaaatataaattacatttaattttatctactttctattctctccataatcattaatcaataagaattgttt 28843554  T
Q  394 tt 395  Q
    ||    
T  28843553 tt 28843552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 247; Significance: 1e-136; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 39970200 - 39969914
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||    
T  39970200 tctcatattctttgtctcaaaatataagcaaaaaagactaatttttatgctattattatgttttttcaaccaaatcatcttttccaatgtaaaattaaat 39970101  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  39970100 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 39970001  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39970000 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattactgttttttgcttataaattaggacggagg 39969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 29180623 - 29180337
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  29180623 tctcatattctttgtctcaaaatataagcaaaaaagacaaacttttatgttattattatgttttttcaaagaaattatcttttccaatgtaaaattaaat 29180524  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||    
T  29180523 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctatgaaacttattccaaggagaa 29180424  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29180423 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 29180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 30776695 - 30776409
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  30776695 tctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatcttttccaatgtaaaattaaat 30776596  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  30776595 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 30776496  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30776495 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagttttttttgcttataaattaggacggagg 30776409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 53677690 - 53677404
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  53677690 tctcatattctttgtctcaaaatataagcaaaaaaaaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 53677591  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||    
T  53677590 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctatgaaactcattccaaggagaa 53677491  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  53677490 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttacttataaattaggacggagg 53677404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 230 - 513
Target Start/End: Complemental strand, 3043376 - 3043093
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3043376 tcatattctttgtctcaaaatataagcgaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 3043277  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||| |||    
T  3043276 aaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagtaca 3043177  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3043176 caaaaaattatacctcaactcactaagtgttagttttcttaataagtgtgaattagtgttttttacttataaattaggacggag 3043093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 30777396 - 30777683
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  30777396 tctcatattatttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaagaaattatcttttccaatgtaaaattaaat 30777495  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  30777496 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaa 30777595  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30777596 cacaaaaaattatacctcaaatcactaattgttagttttcttaataagtgtgaattagtgtttttttgcttataaattaggacggagg 30777683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 10591713 - 10591428
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| |||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10591713 tctcatattttttgtctcaaaatataag-aaaaaagactaatttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 10591615  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  10591614 gcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaa 10591515  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10591514 cacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaattactgttttttgcttataaattaggacggagg 10591428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 43980407 - 43980693
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  43980407 tctcatattctttgtcttaaaatataagtaaaaaataccaacttttatgctattattatattttttcaaacaaatcatcttttccaatgtaaaattaaat 43980506  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  43980507 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttttcatgaaacttatttcaaggagaa 43980606  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43980607 cacaaaaatttatacctcaaatcactaaatgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 43980693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 50768354 - 50768640
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  50768354 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 50768453  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||    
T  50768454 gcaagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttattccaaggaaaa 50768553  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50768554 cacaaaaaattatatctcgaatcactaagtattagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 50768640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 228 - 504
Target Start/End: Complemental strand, 32012538 - 32012261
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  32012538 tctcattttctttgtctcaaaatataagcaaaaaagacaaacttttatgctattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 32012439  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  32012438 gcaaattgcattcaatttattctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccatgaaacttaatttaaggagaa 32012339  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaatt 504  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  32012338 cacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattaatgtttttttgcttataaatt 32012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 230 - 508
Target Start/End: Original strand, 37788362 - 37788640
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  37788362 tcattttctttatctcaaaatataagtaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 37788461  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  37788462 aacttgcatttaatttgttctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaaca 37788561  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattagga 508  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  37788562 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatattttttgcttataaattagga 37788640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 228 - 506
Target Start/End: Original strand, 49901935 - 49902214
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaa-cttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  49901935 tctcatattctttgtctcaaaatataagcaaaaaaaaacaaacttttatgttattattatgttttttcaaacaaatcatcttttccaatataaaattaaa 49902034  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||  |||    
T  49902035 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttttcatgaaacttattccaactaga 49902134  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 506  Q
    ||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49902135 acataaaaaattatacttcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 49902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 228 - 510
Target Start/End: Complemental strand, 9798286 - 9798004
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  9798286 tctcatattctttatcttaaaatataagcaaaaaagatcaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 9798187  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  9798186 gcaaattggattcaatgtgttctcctttttattttctccataatttgtaatcaatgagaattatttttacatctttccatgaaacttatttcaaggagaa 9798087  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
    | || ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9798086 cgcaaaaaattatacctcaaatcactaaatgttagttttcttaataaatgtgaattagtgttttttgcttataaattaggacg 9798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 55937914 - 55937628
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  55937914 tctcattttctttgtcttaaaatataagcaaaaaagaccaacttttatgatatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 55937815  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  ||||||||    
T  55937814 gcaagttgtatttaatttgttctcctttttatcttctccataatttttaaccaatgagaattatttttacatttttccatgaaacttatttcaaggagaa 55937715  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  55937714 cacaaaaacttatacctcaaatcactaagtgttagttttcttaataagtatgaattagtgttttttacttataaattaggacggagg 55937628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 29899624 - 29899910
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| || ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  29899624 tctcattttgtttgtttcaacatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 29899723  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  29899724 gcaagttgcatttaatttgttcacctttttattttcttcatgatttttaaccaatgagaattatttttacatctttccataaaacttattccaaggagaa 29899823  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29899824 cacaaaaaattatacctcaaatcactacgtgttagttttcttaataaatgtgaattagtgttttttacttataaattaggacggagg 29899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 230 - 488
Target Start/End: Original strand, 38940780 - 38941038
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  38940780 tcattttctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 38940879  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||||| |||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||  |||||| |||||| ||||||||||    
T  38940880 aaattgcattcaatttattcttctttttattttttccaaaatttttaatcaatgagaattatttttacatcttttaatgaaacttattccaaggagaaca 38940979  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgt 488  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38940980 caaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgt 38941038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 38187937 - 38187653
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||    
T  38187937 tctcattttctttatctcaaaatataagtaaaaaagatcaacttttatgctattagtatgtattttcaaacaaatcatcttttccaatgtaaaattaaat 38187838  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||   ||||    
T  38187837 gcaagttgcattcaatttgttctcttttttattttctccataatttttaacaaatgagaattatttttacatcttttcatgaaacttattcta---agaa 38187741  T
Q  428 cac-ataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38187740 cacaaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgtttttagcttataaattaggacggagg 38187653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 246 - 514
Target Start/End: Original strand, 51495079 - 51495343
Alignment:
Q  246 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaattt 345  Q
    ||||||||||||||||||| ||||||||||||||||   ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  51495079 aaaatataagcaaaaaagatcaacttttatgctatt---atgtttttttaaacaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaattt 51495175  T
Q  346 gttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctc 445  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| ||| ||||||||| |||||||||||||    
T  51495176 attctcctttttattttctccataatttttaaccaatgagaatcatttttacatcttttcatgaaacttattataaagagaacacaaaaaattatacctc 51495275  T
Q  446 aaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  51495276 aaatcattaagtgttaattttcttaataactgtgaattagtgtttttt-cttataaattaggacggagg 51495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 228 - 506
Target Start/End: Original strand, 1619938 - 1620217
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  1619938 tctcatattctttgtctcaaaatataatcataaaacaccaacttttatgctattattatattttttcaaacaaatcatctttttcaatgtaaaattaaat 1620037  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  1620038 gcaatttgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatattttcatgaaacttattctaaggagaa 1620137  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattag 506  Q
    |||| ||||| ||| ||||||||| ||||| |||  || ||||||||||||||||||||| ||||||| |||||||||||    
T  1620138 cacaaaaaatgatatctcaaatcactaagtattaacttccttaataagtgtgaattagtgtttttttgtttataaattag 1620217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 281 - 513
Target Start/End: Original strand, 47807157 - 47807388
Alignment:
Q  281 tattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacca 380  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47807157 tattatgttttttcaaagaaatcatcttttccaatgtaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaacca 47807256  T
Q  381 atgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    | ||||||||||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||||| ||||  ||| ||||||||||||||||||    
T  47807257 acgagaattatttttacatctttccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaaggattaattttcttaataagtgtga 47807356  T
Q  481 attagtgttttttgcttataaattaggacggag 513  Q
    ||||||| |||||||||||||||||||||||||    
T  47807357 attagtg-tttttgcttataaattaggacggag 47807388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 228 - 484
Target Start/End: Original strand, 52712972 - 52713220
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  52712972 tctcatattctttgtctcaaaatataagtaaaaaagaccaatttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 52713071  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||        ||||||||||| |||||| ||| | ||    
T  52713072 gcaaattgcatttaatttgttctcctttttattttctccataattttcaaccaataagaattatt--------tttccatgaaacttattccaagaaaaa 52713163  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatta 484  Q
    |||| |||||||||| |||||||| ||||| |||||||||||||||| | |||||||    
T  52713164 cacaaaaaattatacttcaaatcactaagtattagttttcttaataaatatgaatta 52713220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 230 - 506
Target Start/End: Complemental strand, 27750557 - 27750278
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||| |||||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  27750557 tcattttctttatctcaaaatataagcataacagaccaacttttatgctatttttatgttatttcaaacaaatcatcttttccaatgtaaaattaaatgc 27750458  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| |||||||||| ||||||||||| ||||||||||||||| | | | |||||||||||||||||||||||||| |||||  ||  | ||||    
T  27750457 aagttgcatttaatttgttcttctttttattttttccataatttttaacaattaaaaattatttttacatctttccatgaaacttattaaaaaaaaaaca 27750358  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttct---taataagtgtgaattagtgttttttgcttataaattag 506  Q
    || ||||| ||| ||||||||| ||| ||||| ||||||   |||||||||| ||||| | |||||||| ||||||||||    
T  27750357 caaaaaatcatatctcaaatcactaaatgttaattttcttaataataagtgtaaattaatattttttgcctataaattag 27750278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 235 - 514
Target Start/End: Complemental strand, 30012157 - 30011878
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaa--tcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||  |||||||| | ||  ||||||||||||||||    
T  30012157 ttctttgtcccaaaatataagcaaaaaagatcaacttttattctattattatgttttttaaaaaaaaaatcatctttccaaag-taaaattaaatgcaaa 30012059  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacat 432  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||| |||||| ||  | ||||||     
T  30012058 ttgcattcaatttgttct--tttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttattccaaaaataacacaa 30011961  T
Q  433 aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagt-gttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||| |  |  | |||  |||||||||||||||||| | ||  |||||||||||| |||||||| |||||    
T  30011960 aaaattatacctcaaattacaatattttaactttcttaataagtgtgaaattgtatttttttgcttatgaattaggatggagg 30011878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 5222509 - 5222217
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaa-----tcatcttttctaatctaaaat 322  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||     |||| ||||| ||  ||||||    
T  5222509 tctcattttctttgtcctaaaatataagtaaaaaagaccaacttttatactattattatgtttttttaaaaaaaaaaaatcattttttccaaagtaaaat 5222410  T
Q  323 taaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaag 422  Q
    ||||||||||||||||| ||||||||||||||||||||||  | |||||  ||| ||||| |||||| ||||||||| |||  |||||| |||||  |||    
T  5222409 taaatgcaaattgcattgaatttgttctcctttttatttttcctataatcattatccaataagaattgtttttacatttttttatgaaacttatttcaag 5222310  T
Q  423 gagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa-ttagtgttttttgcttataaattaggacggagg 514  Q
     |||||||| ||||||||| ||||||| | || || ||||||||||||||||||||||| |||   |||||||||||||||||  ||||||||    
T  5222309 aagaacacaaaaaattataactcaaattactatgtattagttttcttaataagtgtgaatttatatttttttgcttataaattgagacggagg 5222217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 28681724 - 28681853
Alignment:
Q  384 agaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 483  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  28681724 agaattattttaacatctttccataaaacttattctaaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgtgaatt 28681823  T
Q  484 agtgttttttgcttataaattaggacggag 513  Q
    ||| ||||||||||||||||||||||||||    
T  28681824 agtattttttgcttataaattaggacggag 28681853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 262 - 398
Target Start/End: Complemental strand, 5234179 - 5234043
Alignment:
Q  262 agaccaacttttatgctattattatgttttttcaaacaaa-tcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttatt 360  Q
    |||| ||||||||||||||||||||||||||||||| ||| | ||||||| |||  |||||||||||| |||||||||||||||| ||||||||||||||    
T  5234179 agacaaacttttatgctattattatgttttttcaaaaaaaattatctttt-taaaataaaattaaatgtaaattgcattcaatttattctcctttttatt 5234081  T
Q  361 ttctccataatttttaaccaatgagaattatttttaca 398  Q
    |||||||||||  ||||||||| | |||| ||||||||    
T  5234080 ttctccataataattaaccaataataattgtttttaca 5234043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 229 - 431
Target Start/End: Original strand, 40553684 - 40553886
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| |||| ||||||| ||||||| |||||  ||||  |||||||| ||| ||| ||||||||||||| ||    ||||||||    
T  40553684 ctcattttctttgtcccaaattatatgcaaaaa-gaccaacatttatcatatttaattatgttatttaaaa-aaatcatcttttccaaagagaaattaaa 40553781  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||||| |||  ||||||||| | ||||||||||| |  |||||||||| | || |||||||||||||| |||||| |||||||||||| |    
T  40553782 tgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacatctttctatgaaacttattctaaggata 40553881  T
Q  427 acaca 431  Q
    |||||    
T  40553882 acaca 40553886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 229 - 431
Target Start/End: Complemental strand, 8013327 - 8013124
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| |||||| |||||||||||||||||||  ||||  ||||| |||||||||| |||| |||||||| ||   |||||||||    
T  8013327 ctcattttctttgtcccaaattataagtaaaaaagaccaacttttatcatatttaattatattttttcaaa-aaattatcttttccaagtaaaaattaaa 8013229  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||| ||||||||| | |||||||  ||| |||||||| || | |  |||||||| | |||| |||||||||||||| |||||| |||||  ||||| |    
T  8013228 tgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggata 8013129  T
Q  427 acaca 431  Q
    |||||    
T  8013128 acaca 8013124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 827 - 913
Target Start/End: Complemental strand, 16572198 - 16572110
Alignment:
Q  827 ggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg-agaaaaataaataccaggggaaatcggttgcc 913  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||||| |||||||||||||||||    
T  16572198 ggcaaaatattattaaccaacaagcccgtgcgagatgcactaataagctcgggtggaaaaaaaataaatacaaggggaaatcggttgcc 16572110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 23978353 - 23978179
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| || |||| ||||||| ||||||||||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||    
T  23978353 ctcattttctttatcccaaattataagcgaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaa 23978255  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||||| ||||||||||||| |||| |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  23978254 tgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 23978179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 826 - 913
Target Start/End: Original strand, 15186984 - 15187072
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcc 913  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||  ||||| |||||||||||||||||    
T  15186984 cggcaaaatattattaaccaacaagcccgtgcaagatgcactaataagcttgggtggataaaaaagaatacaaggggaaatcggttgcc 15187072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 229 - 436
Target Start/End: Original strand, 37911798 - 37912006
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| |||||| ||||||||| || ||||||  ||||  |||||||||||||||| | || |||||||| ||   |||||||||    
T  37911798 ctcattttctttgtcccaaattataagtaaaaaagactaaattttatcatatttaattatgttttttcaaa-atattatcttttccaaaggaaaattaaa 37911896  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    |||||| |||||| |||||| |||| ||||||||||||| |||||     |||||||| |||| ||||||||| |||| || ||| ||||| ||| || |    
T  37911897 tgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttattttaaagata 37911996  T
Q  427 acacataaaa 436  Q
    ||||| ||||    
T  37911997 acacaaaaaa 37912006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 826 - 944
Target Start/End: Original strand, 47571574 - 47571694
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccatatacaccgg 924  Q
    |||||||||||||||||||||||| |||||| | |  ||||||| ||||||||||| | |||||||||||| |||| |||| |||||||| | |||||||    
T  47571574 cggcaaaatattattaaccaacaaacccgtggaaggagcactaataagctcgggtgaaaaaaaataaatacaagggaaaattggttgccacaaacaccgg 47571673  T
Q  925 ctc-gacaaaaaccccttaaa 944  Q
    |||  ||||||||||||||||    
T  47571674 ctcaaacaaaaaccccttaaa 47571694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 301 - 474
Target Start/End: Complemental strand, 17799299 - 17799126
Alignment:
Q  301 atcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatc 400  Q
    ||||||||||| ||  | ||| ||||||||||||||||| |||||||||||| | | |||||||||||||    |||||||||| |||| ||||||||||    
T  17799299 atcatcttttccaaagtgaaactaaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatc 17799200  T
Q  401 tttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataa 474  Q
    || |||| ||| | |||| ||| |||||||   |||||||||  ||||| || |  | ||||||||||||||||    
T  17799199 ttcccataaaactaattccaagaagaacaccagaaattatactccaaattatcatattttagttttcttaataa 17799126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 47867882 - 47868079
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  47867882 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 47867981  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| ||||||||||||    
T  47867982 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggagg 47868079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 230 - 370
Target Start/End: Complemental strand, 8178475 - 8178335
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||  ||||  ||||| || ||||||| |||| || ||||||||   ||||||||||    
T  8178475 tcattttctttgtctcaaattataag-aaaaaagaccaacttttatcatatttaattatattgtttcaaa-aaattatattttctaaaagaaaattaaat 8178378  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataa 370  Q
    ||||| ||||||||||||| ||||  ||| |||||||| ||||    
T  8178377 gcaaagtgcattcaatttgctctctctttcattttctcaataa 8178335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 319 - 480
Target Start/End: Complemental strand, 5483425 - 5483264
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||| ||| ||||||||||  ||||  ||  |||||||||||||    || ||||||| |||| |||||||||||| | || ||| |||||     
T  5483425 aaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctattaaacttattt 5483326  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    ||| || |||||| |||||||||| ||||||  ||| || ||||||||||||| ||||||||    
T  5483325 taaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagtgtga 5483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 8683394 - 8683258
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||||||||||||| ||||||||||| |||||| || || |||||| |||| ||| |  |||||  ||| |  |||||||| ||||||||||    
T  8683394 ccaatgaaaattatttttacatatttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtg 8683295  T
Q  478 tgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||    |||||||||||||| ||||||||||||    
T  8683294 tgatttttgtttttttgcttataatttaggacggagg 8683258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 47806809 - 47806861
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatta 282  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  47806809 tcatattctttgtctcaaaatataagcaaaaaagatcaatttttatgctatta 47806861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 4058718 - 4058912
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    |||||||||| |||| |||||||||||| | || ||| || |    
T  4058718 taaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaactttt 4058817  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |  || || |||||| |||| |||||  |||||  ||| || |||||||||||||||| ||||| |   | |||||||||||||| || |||||||||    
T  4058818 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtgatt---ttttttttgcttataatttgggacggagg 4058912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 17236446 - 17236342
Alignment:
Q  246 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaa--tcatcttttctaatctaaaattaaatgcaaattgcattcaat 343  Q
    |||||||||| |||| |||| || ||||||| |||||||||  || || ||| |||  |||| ||||||||  |||||||||||||||||||||||||||    
T  17236446 aaaatataagtaaaatagacaaatttttatgttattattattcttatttaaaaaaaaatcattttttctaaaataaaattaaatgcaaattgcattcaat 17236347  T
Q  344 ttgtt 348  Q
    |||||    
T  17236346 ttgtt 17236342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 501
Target Start/End: Complemental strand, 28142860 - 28142586
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaa-aaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaa 325  Q
    ||||| ||||||||  |||| ||||||||| |||| | ||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||||    
T  28142860 ctcattttctttgttccaaattataagcaaaaaaaaatcaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaa 28142762  T
Q  326 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggag 425  Q
    |||||||  ||||| |||||| |||| |||| |||||||| |||||     |||||||| |||| |||||||||| | | || ||| ||||| ||| ||     
T  28142761 atgcaaa-agcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttattttaaagat 28142663  T
Q  426 aacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataa 501  Q
    |||||| ||||||||    ||||  || |  | ||||||||||||||||||||||  ||| | ||||||||||||||    
T  28142662 aacacaaaaaattatgttacaaactatcatattttagttttcttaataagtgtgattttatttttttttgcttataa 28142586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 365
Target Start/End: Original strand, 40411021 - 40411152
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||  |||| ||||| ||||||| ||||||||||||  ||||  |||| ||||||| ||| |||| ||||||| |||  |||||||||||| |||    
T  40411021 ttctttgttccaaattataaacaaaaaaaaccaacttttatcatatttaattaagtttttttaaaaaaat-atcttttttaaagtaaaattaaatgtaaa 40411119  T
Q  333 ttgcattcaatttgttctcctttttattttctc 365  Q
     ||||||||||||| |||| |||| ||||||||    
T  40411120 ctgcattcaatttgatctctttttcattttctc 40411152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 431
Target Start/End: Complemental strand, 5842016 - 5841814
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatta--ttatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||| ||| |||||| ||||||||  |||||||||  ||||   |||| || ||||||| |||| |||||||||||   |||||| |||    
T  5842016 tcattttctttgtctaaaattataagtaaaaaagattaacttttatcatatttagttatattgtttcaaa-aaattatcttttctaaagaaaaattcaat 5841918  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||| |||| |||||||| ||||  ||| ||||| || ||||    |||||||||| ||||||||||||||||| | || ||| |||||  ||||| ||    
T  5841917 gcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatttcaaggataa 5841818  T
Q  428 caca 431  Q
    ||||    
T  5841817 caca 5841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 16605092 - 16605040
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  16605092 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatgctatt 16605040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 402
Target Start/End: Complemental strand, 28318655 - 28318481
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| | ||||||||||| || |||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||    
T  28318655 ctcattttctttgtcccaaattgtaagcaaaaaaaactaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 28318557  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    || ||| ||||||||||||  |  | |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  28318556 tgtaaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 28318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 32410332 - 32410416
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||||||||||||| || |||||||||| |||| ||||||||||||| ||||||    | |||||| |||||||||||||||||    
T  32410332 aaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagcaatgaaaattatttttacatctt 32410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 378 - 474
Target Start/End: Complemental strand, 35310830 - 35310734
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataa 474  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||| || |||||| |||| ||| |  |||||  ||| || ||||||||||||||||    
T  35310830 ccaatgaaaattgtttttacatctttccatgaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataa 35310734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 378 - 514
Target Start/End: Original strand, 42915594 - 42915730
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||| ||||||||||||||||||||| |||||| || || |||||| |||| ||| |  |||||  |||  | |||||||| ||||||||||    
T  42915594 ccaatgaaaattgtttttacatctttccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtg 42915693  T
Q  478 tgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||  ||    |||||||||||||| ||||||||||||    
T  42915694 tggtttttgattttttgcttataatttaggacggagg 42915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 826 - 888
Target Start/End: Original strand, 25641272 - 25641335
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||    
T  25641272 cggcaaaatgttattaaccaacaagcccgtgcaagaagcactaaaaagcttgggtggagaaaaa 25641335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 317 - 480
Target Start/End: Original strand, 29203509 - 29203672
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||||   |    
T  29203509 taaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaatt 29203608  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    |  || || |||||| ||||||||||  |||||  ||| || ||||||||||||||||||||||    
T  29203609 tgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 29203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 826 - 941
Target Start/End: Complemental strand, 32183410 - 32183288
Alignment:
Q  826 cggcaaaatattattaaccaa-caagcccgtgca-gatgcactaacaagctcgggtgga-gaaaaataa-ataccaggggaaatcggttgccat--atac 919  Q
    ||||||||||||||||||||| |||||||||||| |  ||||||| ||||||||||||| |||||| || | |  |||||||||||||||||||  | ||    
T  32183410 cggcaaaatattattaaccaaacaagcccgtgcaaggcgcactaataagctcgggtggaagaaaaaaaacaaagaaggggaaatcggttgccatacaaac 32183311  T
Q  920 accggctcg-acaaaaacccctt 941  Q
    ||||||||| |||||||||||||    
T  32183310 accggctcgaacaaaaacccctt 32183288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 370
Target Start/End: Complemental strand, 47516423 - 47516287
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| |||| ||||||||||||||||||||||||||   |||  |||||||| ||||||| |||| |||||||| ||   |||||||||| ||||    
T  47516423 ttctttgtcccaaattataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatacaaa 47516325  T
Q  333 ttgcattcaatttgttctcctttttattttctccataa 370  Q
     ||||||  ||||| ||||  ||| |||||||| ||||    
T  47516324 gtgcatttgatttgctctctctttcattttctcaataa 47516287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 317 - 513
Target Start/End: Original strand, 20281594 - 20281787
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  20281594 taaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 20281693  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    || || || |||||| |||| |||||  |||||  ||| || ||||||||||||||||||||||  || | |||||||||||||| || ||||||||    
T  20281694 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga--ta-ttttttttgcttataatttgggacggag 20281787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 28669149 - 28668953
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    ||||||||||| |||||| ||||||||||  ||||  ||| ||||| || |||| |  |||||||||| |||| ||||||||| || | || |||  | |    
T  28669149 taaaattaaatacaaattacattcaattttctctctctttcattttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaaccttt 28669051  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| || |||||| |||| ||||| | ||||  ||| || |||||||||||||||||||||| ||  | | || | ||||||| ||||||||||||    
T  28669050 tctaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtgattttttttcttcttcttataatttaggacggagg 28668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 39078160 - 39078356
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||| ||| ||||||||||  | ||  ||| ||||| || |||| |  || ||||||| |||| |||||||||||| | || ||| || |    
T  39078160 taaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt-ctataaaactttt 39078258  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||  | |||||| ||||||| || |||||||||    
T  39078259 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattttttttttttttcttataatttgggacggagg 39078356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 48793716 - 48793582
Alignment:
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtg 477  Q
    ||||||| |||| |||||||||||| |||||||| |||||| || || ||||||  ||| ||| |  |||||  ||| |  |||||||||||||||||||    
T  48793716 ccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacaca--aaactatgctacaaattcttatgctttagttttcttaataagtg 48793619  T
Q  478 tgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| ||   ||||||| ||||||| ||||||||||||    
T  48793618 tgatttttggtttttttcttataatttaggacggagg 48793582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 17187039 - 17186987
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  17187039 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatt 17186987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 402
Target Start/End: Complemental strand, 46070753 - 46070586
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaa-gaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaa 331  Q
    ||||||||| |||| ||||||||||||| |||||| ||||||  ||||  |||||||| ||| ||| |||| |||||||| ||   ||||||||||||||    
T  46070753 ttctttgtcccaaattataagcaaaaaaagaccaatttttatcatatttaattatgttgtttgaaa-aaattatcttttccaaaggaaaattaaatgcaa 46070655  T
Q  332 attgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    | ||||||||||||  ||||  ||| |||||||| ||||     ||||||||| |||| ||||||||||||    
T  46070654 agtgcattcaatttactctc--tttcattttctcaataaccaacaaccaatgaaaattgtttttacatctt 46070586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 346
Target Start/End: Original strand, 53848381 - 53848499
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| |||||| |||||||||||||||||||   |||  ||||| || ||||||| ||||||||||||  ||   |||| ||||    
T  53848381 ctcatcttctttgtcccaaattataagtaaaaaagaccaacttttatcaaatttaattatattgtttcaaa-aaatcatctttttcaaagaaaaaataaa 53848479  T
Q  327 tgcaaattgcattcaatttg 346  Q
    |||||| |||||||||||||    
T  53848480 tgcaaagtgcattcaatttg 53848499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 463 - 514
Target Start/End: Original strand, 51495372 - 51495422
Alignment:
Q  463 ttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  51495372 ttttcttaataagtgtgaattaatatttttt-cttataaattaggacggagg 51495422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 318 - 480
Target Start/End: Complemental strand, 5064803 - 5064641
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    ||||||||||||||| ||||||||||||  |||| |||| |||||||| |||||     || ||||| |||| |||||||||||| |  | ||| |||||    
T  5064803 aaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatt 5064704  T
Q  418 ctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
      || || |||||| ||||||||    ||||| | || || ||||||||||||||||||||||    
T  5064703 tcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagtgtga 5064641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 395 - 473
Target Start/End: Complemental strand, 17236340 - 17236262
Alignment:
Q  395 tacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaata 473  Q
    ||||| |||| |||||| |||||  ||| |||||||| ||||||||||||||||  |||| || |||||||||||||||    
T  17236340 tacatttttctatgaaacttatttcaagaagaacacaaaaaattatacctcaaactattatgttttagttttcttaata 17236262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 417
Target Start/End: Complemental strand, 25297369 - 25297271
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||||||||| ||||| ||||||||||    ||  || |||||||||||||||   || ||||||| |||| ||||||||||||||||||||| |||||    
T  25297369 aaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctttccatgaaacttatt 25297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 35311000 - 35310954
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||    
T  35311000 ctcattttctttgtcttaaaatataagcaaaaaagacaaacttttat 35310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 35529572 - 35529618
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  35529572 ttctttgtcccaaaatataagcaaaaaagacaaacttttattctatt 35529618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 38140896 - 38140826
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcc 352  Q
    |||||||| ||||||| ||||||||||||| ||  | |||||||||| |||||||||| | ||||||||||    
T  38140896 attatgttatttcaaaaaaatcatcttttccaaaatgaaattaaatgaaaattgcatttagtttgttctcc 38140826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 514
Target Start/End: Original strand, 2229254 - 2229447
Alignment:
Q  321 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattcta 420  Q
    |||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||| | |||| |||||||||||| | || ||| || ||| |    
T  2229254 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttcca 2229353  T
Q  421 aggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    | || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| || |||||||||    
T  2229354 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggagg 2229447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 828 - 888
Target Start/End: Original strand, 16662312 - 16662373
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    |||||||||||||||||||||||||||||| ||| ||||||| |||||  |||||| |||||    
T  16662312 gcaaaatattattaaccaacaagcccgtgcgagaagcactaataagctaaggtggaaaaaaa 16662373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 55580562 - 55580607
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaactttta 274  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  55580562 ctcattttctttgtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 317 - 417
Target Start/End: Complemental strand, 1585496 - 1585396
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||| ||||| ||||||||||  ||||  ||  ||||||||||||||   || ||||| | |||| |||| |||||||||||||||| ||||    
T  1585496 taaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccatgaaacttat 1585397  T
Q  417 t 417  Q
    |    
T  1585396 t 1585396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 2229179 - 2229219
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  2229179 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 14332691 - 14332731
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  14332691 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 14332731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 26916257 - 26916297
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  26916257 ttctttgtctcaaaatataagcaaaaaagataaacttttat 26916297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 39078052 - 39078104
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  39078052 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatt 39078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 42915430 - 42915470
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  42915430 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 48793883 - 48793831
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||||| ||||||| ||||||||| |||||    
T  48793883 ctcattttctttgtcccaaaatataagcataaaagacaaacttttattctatt 48793831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 363
Target Start/End: Original strand, 49080175 - 49080306
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttct-aatctaaaattaaatgcaa 331  Q
    |||| |||| |||| ||||||||||||||| ||||||||||  ||||  |||||||||||| ||| ||||  |  ||| | ||   ||||||||||||||    
T  49080175 ttctctgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattgttatttttcaaaggaaaattaaatgcaa 49080274  T
Q  332 attgcattcaatttgttctcctttttattttc 363  Q
    | ||||||||||||| |||| |||| ||||||    
T  49080275 agtgcattcaatttgatctctttttcattttc 49080306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 7652172 - 7652121
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccat 368  Q
    |||||||||||| ||||| || |||||||||||||| || ||||||||||||    
T  7652172 taaaattaaatgaaaatttcactcaatttgttctccattctattttctccat 7652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 4058615 - 4058661
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||||||||  |||||||||||||||||||| ||||||||| |||||    
T  4058615 ttctttgtcctaaaatataagcaaaaaagacaaacttttatcctatt 4058661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 828 - 858
Target Start/End: Original strand, 45511407 - 45511437
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgca 858  Q
    |||||||||||||||||||||||||||||||    
T  45511407 gcaaaatattattaaccaacaagcccgtgca 45511437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 4512954 - 4512991
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4512954 tttgtcccaaattataagcaaaaaagaccaacttttat 4512991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 8018445 - 8018490
Alignment:
Q  379 caatgagaattatttttacatctttccatgaaaattattctaagga 424  Q
    |||||| ||||||||||||||||||  |||||| ||||||||||||    
T  8018445 caatgaaaattatttttacatctttatatgaaacttattctaagga 8018490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 245; Significance: 1e-135; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 230 - 514
Target Start/End: Original strand, 55400653 - 55400937
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  55400653 tcatattctttgtctcaaaatataagcaaaaaagacttacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 55400752  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  55400753 aaattgcattcaatttgttcacctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaagagaaca 55400852  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55400853 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 55400937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 26641319 - 26641033
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||    
T  26641319 tctcatattctttgtctcaaaatataagcaaaaaacaccaacttttatgctattattatgttttttcaaacaaatcatctttttcaaggtaaaattaaat 26641220  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  26641219 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttgcatctttccatgaaacttattccaaggagaa 26641120  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26641119 cacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 26641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 21654157 - 21654444
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  21654157 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattattatgtttttttcaaacaaatcatcttttccaatgtaaaattaaa 21654256  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||  |||||||    
T  21654257 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaacaaatgaaaattatttttacatctttccatgaaacttatttcaaggaga 21654356  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21654357 acacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 21654444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 228 - 505
Target Start/End: Original strand, 31126125 - 31126402
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  31126125 tctcatattctttgtctcaaaatataaacaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcattttttccaatgtaaaattaaat 31126224  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||  ||||||||    
T  31126225 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttatttcaaggagaa 31126324  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaatta 505  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31126325 cacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaatta 31126402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 230 - 512
Target Start/End: Original strand, 46580451 - 46580732
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||||||||    
T  46580451 tcatattctttgtctcaaaatataagtaaaaaagaccaacttttatgccattattatgttttttcaaacaaatcatattttacaatgtaaaattaaatgc 46580550  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||  ||||||||||    
T  46580551 aaattgcattcaatttgttctcctttttattttctccataatttttaatcaatgagaattatttttacatctttccatg-aacttatttcaaggagaaca 46580649  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46580650 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattagaacgga 46580732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 53020095 - 53020382
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt-ttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||    
T  53020095 tctcatattttttgtctcaaaatataagtaaaaaataccaacttttatgctattattatgtttttttcaaacaaatcatctttttcaatgtaaaattaaa 53020194  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||| |||    
T  53020195 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttccataaaacttattccaagaaga 53020294  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53020295 acacaaaaaattataactcaaatcactaaatgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 53020382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 51426530 - 51426818
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttt--ttcaaacaaatcatcttttctaatctaaaattaa 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||| |||||||||    
T  51426530 tctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattcttatgttttttttcaaacaaatcatcttttctaatgtaaaattaa 51426629  T
Q  326 atgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggag 425  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  51426630 atgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaatttattctaagaag 51426729  T
Q  426 aacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||| ||||||||||||||||||| ||| |||||||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  51426730 aacacaaaaaattatacctcaaatcactaaatgttagtttttttaataagcgtaaattagtgttttttgcttataaattaggacggagg 51426818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 238 - 499
Target Start/End: Original strand, 28793084 - 28793346
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaa-ttaaatgcaaattgc 336  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  28793084 tttgtctcaaaatataagcaaaaaagaccaacttttatgctatttttatgttttttcaaacaaatcatcttttctaatgtaaaaattaaatgcaagttgc 28793183  T
Q  337 attcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaa 436  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  28793184 atttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaatttattccaaggataacacaaaaaa 28793283  T
Q  437 ttatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttat 499  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| |||||    
T  28793284 ttatacctcaaatcactaagtgttagttttcttaataagtgtgaattattattttttacttat 28793346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 32322446 - 32322160
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||| ||||||||| |  |||||||||||| |||||||||||||||||||| |||||||  ||| |||||||||||    
T  32322446 tctcattttctttgtctcaaaatataagtaaaaaagactagattttatgctatttttatgttttttcaaacaaattatctttttcaatgtaaaattaaat 32322347  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
     ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  32322346 acaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttgcatctttccatgaaacttattccaaggagaa 32322247  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32322246 cacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 32322160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 231 - 514
Target Start/End: Complemental strand, 37324292 - 37324004
Alignment:
Q  231 catattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt----caaacaaatcatcttttctaatctaaaattaaa 326  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||    |||||||||||||||||| ||| ||||||||||    
T  37324292 catattctttgtcttaaaatataagcaaaaaagaccaacttttatgtcattattatgttttttttttcaaacaaatcatcttttccaatgtaaaattaaa 37324193  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaa-ttattctaaggag 425  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || ||     
T  37324192 tgcaaattgcattcaatttgtttccctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaacttatttcaaagat 37324093  T
Q  426 aacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37324092 aacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattagaacggagg 37324004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 228 - 502
Target Start/End: Original strand, 1335023 - 1335297
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  1335023 tctcatattctttgtctcaaaatataagcaaaaaagaccaatttttatgttattattatgttttttcaaacaaatcatctttttcaatgtaaaattaaat 1335122  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||    
T  1335123 gcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattatttttacatctttccatgaaacttattccaaggagaa 1335222  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaa 502  Q
    |||| ||||| ||| |||||| || ||||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  1335223 cacaaaaaataatatctcaaaacactaagtattagttttcttaataagtgtgaattaatgtttttttcttataaa 1335297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 246 - 514
Target Start/End: Complemental strand, 46296266 - 46295997
Alignment:
Q  246 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaattt 345  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||| ||||||| |||||    
T  46296266 aaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccgatgtaaaattaaatgcaagttgcatttaattt 46296167  T
Q  346 gttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacac-ataaaattatacct 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||    
T  46296166 gttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaaattatacct 46296067  T
Q  445 caaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||| |||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  46296066 caaatcactaaccgttagttttcttaataagtgtgaattagtattttttacttataaattaggacggagg 46295997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 238 - 505
Target Start/End: Original strand, 43575881 - 43576147
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  43575881 tttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgtttt-tcaaacaaatcatcttttctaatgtaaaattaaatgcaagttgca 43575979  T
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  43575980 tttaatttattctcctttttattttctccataatttttaaccaatgataattatttttacatctttccatgaaacttattcgaaggagaacacaaaaaat 43576079  T
Q  438 tatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaatta 505  Q
     ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||  ||||||||||    
T  43576080 catacctcaaatcactaagtgttaattttcttaataagtatgaattagtgttttttagttataaatta 43576147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 235 - 514
Target Start/End: Complemental strand, 16739355 - 16739086
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||     ||    
T  16739355 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatattttttcaaacaaatcatcttttccaatgtaaaattaaat-----tt 16739261  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||  |    
T  16739260 gcatttaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttatatctttccatgaaacttattccaaggagaacacaaca 16739161  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||||||     | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16739160 aattatacctcaaat-----aatgttagttttcttaataagtgtgaattagtgtttttggcttataaattaggacggagg 16739086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 228 - 467
Target Start/End: Original strand, 45781310 - 45781549
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  45781310 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 45781409  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
     ||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  45781410 tcaagttgcatttaatttgttctcatttttatcttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattctaaagagaa 45781509  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttc 467  Q
    |||| |||||||||| |||||||| |||||||||||||||    
T  45781510 cacaaaaaattatacatcaaatcactaagtgttagttttc 45781549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 235 - 512
Target Start/End: Original strand, 51255108 - 51255383
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  51255108 ttctttgtctcaaaatataagtaaaaaagatcaacttttatgttatt--tatgttttttcaaacaaatcatcttttccaatctaaaattaaatgcaagtt 51255205  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||   ||||||||||| ||    
T  51255206 gcatttaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatatttccatgaaacttatttctaggagaacacaaaa 51255305  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||||||| ||| || | || ||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||    
T  51255306 aattatacttcatattactacgtgttagttttcttaataaatatgaattaatattttttgcttataaattaggacgga 51255383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 282 - 513
Target Start/End: Original strand, 49068018 - 49068249
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49068018 attatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaa 49068117  T
Q  382 tgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaa 481  Q
    |||||||||||||||||||||||||||||| |||||   ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  49068118 tgagaattatttttacatctttccatgaaacttatttataggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgtgaa 49068217  T
Q  482 ttagtgttttttgcttataaattaggacggag 513  Q
    ||| | ||||||||||||||||||||||||||    
T  49068218 ttaatattttttgcttataaattaggacggag 49068249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 228 - 431
Target Start/End: Original strand, 23513480 - 23513683
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||    
T  23513480 tctcatattctttgtctcaaaatataagcaaaaaataccaacttttatgctattattatgttttttcaaacaaaacatctttttcaatgtaaaattaaat 23513579  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  || |||||    
T  23513580 gcaaattgcattcaatttgttctcctttttattttctccataatttttacccaatgagaattatttttacatctttccatgaaacttatttcaaagagaa 23513679  T
Q  428 caca 431  Q
    ||||    
T  23513680 caca 23513683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 228 - 510
Target Start/End: Original strand, 46819962 - 46820229
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||    
T  46819962 tctcattttctttgtctcaaaatataaataaaaaagatcaacttttatgctatttttatgtttttttaaacaaatcatcttttccaatgtaaaattaaat 46820061  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| ||||||||||||||||||||||||||||               |||||||||| ||||||||||||||||| ||||||  || ||||    
T  46820062 gcaagttgcatttaatttgttctcctttttattttctccat---------------agaattatttatacatctttccatgaaatttattccgagaagaa 46820146  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  46820147 cacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgtgaattagtggtttttacttataaattaggacg 46820229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 283 - 514
Target Start/End: Original strand, 52252004 - 52252232
Alignment:
Q  283 ttatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 382  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  52252004 ttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagttacatttaatttgttctcttttttattttctccataatttttaatcaat 52252103  T
Q  383 gagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaat 482  Q
    ||||||||| ||||||||||||||||||| |||||| ||| |||||||| |||||||||| |||||||| ||||||||||||||||   ||||| |||||    
T  52252104 gagaattatatttacatctttccatgaaacttattccaagaagaacacaaaaaattatacttcaaatcactaagtgttagttttct---taagtatgaat 52252200  T
Q  483 tagtgttttttgcttataaattaggacggagg 514  Q
    || | |||||| ||||||||||||||||||||    
T  52252201 taatattttttacttataaattaggacggagg 52252232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 333 - 511
Target Start/End: Complemental strand, 45347815 - 45347637
Alignment:
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacat 432  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||     
T  45347815 ttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaa 45347716  T
Q  433 aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgg 511  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  45347715 aaaatcatacctcaaatcactaagtgttagttttcttaataaatatgaattagtgttttttacttataaattaggacgg 45347637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 235 - 514
Target Start/End: Complemental strand, 36189206 - 36188927
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttca-aacaaatcatcttttctaatctaaaattaaatgcaaat 333  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| || ||||| ||||||| ||  |||||||||||||||||    
T  36189206 ttctttgtc-caaaatataagcaaaaaagaccatcttttatgttattattatgttttttcacaaaaaatcttcttttccaaagtaaaattaaatgcaaat 36189108  T
Q  334 tgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacata 433  Q
    |||||||||||||||| |||||||||||| | || |||  ||||||||||||||||  |||||| ||||||||||||| |||||  |||||||| ||| |    
T  36189107 tgcattcaatttgttcacctttttattttattcacaatcattaaccaatgagaattggttttacttctttccatgaaacttatttcaaggagaatacaaa 36189008  T
Q  434 aaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| |||||||||||| | |  || |||| |||||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  36189007 aaactatacctcaaattactgtgttttagatttcttaataagtgtgaatttgtgttttttgcttataaattgggatggagg 36188927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 341 - 510
Target Start/End: Original strand, 34022625 - 34022794
Alignment:
Q  341 aatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattat 440  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||| ||||||||    
T  34022625 aatttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattat 34022724  T
Q  441 acctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34022725 acctcaaatcactaagtattagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 34022794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 13541194 - 13541343
Alignment:
Q  232 atattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaa 331  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  13541194 atattctttgtctcaaaatataagaaaaaaagaccaacttttatgttattattatgttttttcgaacaaatcatcttttccaatgtaaaattaaatgcaa 13541293  T
Q  332 attgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  13541294 attgcattcaatgtgttttcctttttattttctctataatttttaaccaa 13541343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 52172204 - 52172028
Alignment:
Q  242 tctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaatgcaaattgcattc 340  Q
    |||||||||||||||||||||||  || |||||||||||| ||||||||||| |||||||||||||||||  ||| ||||||||||||||| |||||||     
T  52172204 tctcaaaatataagcaaaaaagattaatttttatgctatttttatgtttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgcattt 52172105  T
Q  341 aatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  52172104 aatttgttctcctttttattttctccataatttttaaccaatgagaatcatttttacatcttttcataaaacttatt 52172028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 240 - 512
Target Start/End: Original strand, 51309348 - 51309611
Alignment:
Q  240 tgtctcaaaatataagcaaaaaa-gaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcat 338  Q
    ||||||||||||||||||||||| |||||||||||||      |||||     |||||  |||| |||||||||||  ||||||||||||||||||||||    
T  51309348 tgtctcaaaatataagcaaaaaaagaccaacttttat------attat-----ttcaagaaaataatcttttctaaattaaaattaaatgcaaattgcat 51309436  T
Q  339 tcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaatt 438  Q
    ||||||||||| ||||| |||| ||||||||||  ||||||||| |||||| ||| |||||||||| |||||| |||||| ||| |||||||| ||||||    
T  51309437 tcaatttgttcccctttctattctctccataatcattaaccaataagaattgtttatacatctttctatgaaacttattccaagaagaacacaaaaaatt 51309536  T
Q  439 atacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacgga 512  Q
    ||||||||||  | || || ||  |||||||||||| |||||||| ||| ||||||||||||||||| |||||||    
T  51309537 atacctcaaactactatgtttttattttcttaataaatgtgaatttgtgtttttttgcttataaattgggacgga 51309611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 828 - 956
Target Start/End: Original strand, 28934741 - 28934873
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccatatacaccggct 926  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||  || || |||||||||||||||||| | |||||||||    
T  28934741 gcaaaatattattaaccaacaagcccgtgcaagaagcactaataagctcgggtggagaaaaaacaaaacaaggggaaatcggttgccacaaacaccggct 28934840  T
Q  927 cg-acaaaaacccctt--aaaaccaccccacac 956  Q
    || |||||||||||||  |||||||||||||||    
T  28934841 cgaacaaaaaccccttaaaaaaccaccccacac 28934873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 826 - 953
Target Start/End: Original strand, 43073049 - 43073180
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccat-atacaccg 923  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||  ||||| ||||||||||||||||| | | ||||||    
T  43073049 cggcaaaatattattaaccaacaagcccgtgcaagatgcactaataagcttgggtggaaaaaaaagaatacaaggggaaatcggttgccttaaaacaccg 43073148  T
Q  924 gctcg-acaaaaacccctt-aaaaccacccca 953  Q
    ||||| ||||||||||||| ||||||||||||    
T  43073149 gctcgaacaaaaaccccttaaaaaccacccca 43073180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 417
Target Start/End: Original strand, 21214155 - 21214344
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| ||||||||||||||| ||||||||||   |||  |||||||||||||||| | || |||||||| ||   |||||||||    
T  21214155 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatcacatttaattatgttttttcaaa-atattatcttttccaaatgaaaattaaa 21214253  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||||| ||||||||||||| |||| ||||||||||||| |||||     |||||||| |||| |||||||||||||| || ||| |||||    
T  21214254 tgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatt 21214344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 229 - 417
Target Start/End: Complemental strand, 23209484 - 23209295
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||||  ||||  |||||||| ||||||| ||||||||||| | ||    ||||||||    
T  23209484 ctcattttctttgtcttaaattataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaa-aaatcatctttcccaaagagaaattaaa 23209386  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    ||||||||||||||| | |||||||| ||| ||||||||  ||| |  |||||||| | |||||||||| |||||||| || ||| |||||    
T  23209385 tgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttatt 23209295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 34022534 - 34022617
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttc 311  Q
    |||||| |||||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||    
T  34022534 tctcattttctttgtctcaaaatataagcaaaaaaaaccattttttatgctatttttatgttttttcaaacaaatcatcttttc 34022617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 433 - 514
Target Start/End: Original strand, 13541351 - 13541432
Alignment:
Q  433 aaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  13541351 aaaattatacctcaaattactaagtgttaattttcttaataagtgtgaattagtgttttttggttataaattagaacggagg 13541432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 229 - 371
Target Start/End: Complemental strand, 22456212 - 22456069
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| || |||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||    
T  22456212 ctcattttctttatcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 22456114  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    |||||| ||||||||||||| |||| |||| |||||||| |||||    
T  22456113 tgcaaaatgcattcaatttgctctctttttcattttctctataat 22456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 230 - 371
Target Start/End: Complemental strand, 22479257 - 22479115
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||| |||| |||||||||||||||| |||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||||||    
T  22479257 tcattttctttgtcccaaattataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaat 22479159  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    ||||| ||||||||||||| |||| |||| |||||||| |||||    
T  22479158 gcaaagtgcattcaatttgctctctttttcattttctctataat 22479115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 822 - 953
Target Start/End: Original strand, 8431417 - 8431551
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgcca-tatac 919  Q
    ||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||| |||| ||||||||| || |||||||||||||||| |  | ||    
T  8431417 gaaacggcaaaatattattgatcaagaagcccgtgcaagatgcactaacaagctcggatgga-aaaaataaacacaaggggaaatcggttgcaacaaaac 8431515  T
Q  920 accggctcg-acaaaaacccctt-aaaaccacccca 953  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  8431516 accggctcgaacaaaaaccccttaaaaaccacccca 8431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 428 - 514
Target Start/End: Original strand, 23514554 - 23514641
Alignment:
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| || |||||||||||||||||| ||||||||    
T  23514554 cacacaaaattatacctcaaatcaataagtgttagttttcttaataaatgtgaattaatgtttttttgcttataaattaagacggagg 23514641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 350 - 493
Target Start/End: Original strand, 30612213 - 30612356
Alignment:
Q  350 tcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaat 449  Q
    ||||||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||||| | ||| ||| ||||||| | ||||||||| || ||||    
T  30612213 tcctttttattttttccataatcattaaccaatgagaattgtttttacatctttctatgaaactcattttaaagagaacataaaaaattatatcttaaat 30612312  T
Q  450 cattaagtgttagttttcttaataagtgtgaattagtgtttttt 493  Q
     | ||  | || |||||||||||||||||||||| || ||||||    
T  30612313 tactatatttttgttttcttaataagtgtgaatttgtatttttt 30612356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 229 - 401
Target Start/End: Original strand, 38401294 - 38401467
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||| |||| ||||||||||||||| ||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||    
T  38401294 ctcattttctttgtcccaaattataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aaataatcttttccaaaagaaaattaaa 38401392  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatct 401  Q
    |||||| | |||| |||||  |||| |||| |||||||| ||||||    |||||||| ||||||||||||||||    
T  38401393 tgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatct 38401467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 230 - 402
Target Start/End: Original strand, 10251926 - 10252099
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||||||| | || |||||||| ||   |||||||||     
T  10251926 tcattttctttgtctcaaattataagcaaaaaataccaacttttatcatatttaattatgttttttcaaa-agattatcttttccaaaggaaaattaaaa 10252024  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||| ||||||||||||| |||  |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  10252025 gcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 10252099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 827 - 945
Target Start/End: Original strand, 44656229 - 44656353
Alignment:
Q  827 ggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataa---ataccaggggaaatcggttgccatat-acac 921  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||   |||| |||| |||||||||||||||| ||||    
T  44656229 ggcaaaatattattaaccaacaagcccgtgcaagatgcacaaataagctcgggtggagaaaaaaaaaccatacaagggaaaatcggttgccatataacac 44656328  T
Q  922 cggctcg-acaaaaaccccttaaaa 945  Q
     | |||| ||||||| |||||||||    
T  44656329 agactcgaacaaaaatcccttaaaa 44656353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 245 - 514
Target Start/End: Complemental strand, 7886806 - 7886535
Alignment:
Q  245 caaaatataagcaaaaaag-accaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattca 341  Q
    |||| |||||||||||||  ||||||||||||  ||||  |||||||| ||| ||| ||||||||||||| ||   ||||| ||||||||| ||||||||    
T  7886806 caaattataagcaaaaaaataccaacttttatcatatttaattatgttgttttaaa-aaatcatcttttccaaagaaaaatcaaatgcaaagtgcattca 7886708  T
Q  342 atttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattata 441  Q
    ||||| ||||  ||| |||||||| |||| |  |||||||||| |||| |||||||||||||| || ||| |||||  ||| | ||||||  ||| |||     
T  7886707 atttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatttcaagaataacacaagaaactatg 7886608  T
Q  442 cctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     | ||||  | || || |||||||||||||||||| ||| ||  | ||||||||||||||  | |||||||||    
T  7886607 tcacaaactactatgttttagttttcttaataagtttgattttattttttttgcttataatattggacggagg 7886535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 283 - 475
Target Start/End: Original strand, 34105500 - 34105697
Alignment:
Q  283 ttatgttttttcaaacaaatcatcttttctaatctaaaattaaat-----gcaaattgcattcaatttgttctcctttttattttctccataatttttaa 377  Q
    ||||||| ||||||| ||||||||||||| ||  |||||||||||     | |||||||||| |||||||||| |||| |||| ||| ||||||  ||||    
T  34105500 ttatgttatttcaaaaaaatcatcttttcaaaagtaaaattaaattaaatgtaaattgcattgaatttgttctgctttctattctcttcataatcattaa 34105599  T
Q  378 ccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataag 475  Q
    ||||| |||||| ||||||||||||||||| ||| |||||  ||| | || ||| |||| ||||||| |||  | || || || ||||||||||||||    
T  34105600 ccaataagaattgtttttacatctttccataaaacttattacaagaataaaacaaaaaactataccttaaactactatgtttttgttttcttaataag 34105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 235 - 371
Target Start/End: Complemental strand, 2994616 - 2994479
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| |||| |||||| ||||| ||| |||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||||||||    
T  2994616 ttctttgtcccaaattataagaaaaaatgacaaacttttatcgtatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgcaaa 2994518  T
Q  333 ttgcattcaatttgttctcctttttattttctccataat 371  Q
     ||||||||||||| |||| |||| |||||||| |||||    
T  2994517 gtgcattcaatttgctctctttttcattttctctataat 2994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 235 - 402
Target Start/End: Original strand, 34194808 - 34194976
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| || | ||||||||||||||||||||||||||  | ||  |||||||| ||||||| |||| |||||||| ||   |||||||||||||||    
T  34194808 ttctttgtcccagattataagcaaaaaagaccaacttttatcatttttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatgcaaa 34194906  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
     |||||||| |||| ||||  ||| |||||||| ||||    |||||||||| |||| ||||||||||||    
T  34194907 gtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatctt 34194976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 826 - 951
Target Start/End: Original strand, 9358752 - 9358883
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgc--catatacacc 922  Q
    |||||||||||||||| ||||||||||||||| ||| | ||||| ||||| ||||||||||||| | |||  ||||||||||||||||  || | |||||    
T  9358752 cggcaaaatattattacccaacaagcccgtgcgagaagtactaataagcttgggtggagaaaaaaacatagaaggggaaatcggttgccgcacaaacacc 9358851  T
Q  923 ggctcg-acaaaaacccctt--aaaaccaccc 951  Q
    |||||| |||||||||||||  ||||||||||    
T  9358852 ggctcgaacaaaaacccctttaaaaaccaccc 9358883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 230 - 480
Target Start/End: Original strand, 10114827 - 10115077
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| |||||||||||||| ||||||||||||| || |||||||||  ||||  ||||||||||||||| || || |||||||| ||   |||||||||     
T  10114827 tcattttctttgtctcaaattataagcaaaaaatac-aacttttatcatatttaattatgttttttcaa-cagattatcttttccaaaggaaaattaaaa 10114924  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||| ||||||||||||| |||  |||| |||||||| |||||     |||||||| |||| |||||||||||| | || ||| |||||  || || ||    
T  10114925 gcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataa 10115024  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
     ||| ||||||||    ||||  | || || ||||||||||||||||||||||    
T  10115025 tacaaaaaattatgttacaaactactatgttttagttttcttaataagtgtga 10115077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 37042532 - 37042335
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| ||||||||   || ||||||| |||| |||||||||||| | || ||| || |    
T  37042532 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttt 37042433  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| || |||||||||    
T  37042432 tccaacgaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggagg 37042335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 319 - 483
Target Start/End: Complemental strand, 26725104 - 26724940
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||| ||||||||| |||||| |||  ||||  || |||||||||||||||   |||||||||| |||| ||||||||||||  ||  ||| ||||||    
T  26725104 aaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttattc 26725005  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 483  Q
     || || |||||| |||||||||| ||||||  |||  | |||||||||||||||||| ||||||    
T  26725004 caaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttaataagtatgaatt 26724940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 49067028 - 49067080
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatta 282  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49067028 tcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgctatta 49067080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 240 - 365
Target Start/End: Original strand, 49583890 - 49584016
Alignment:
Q  240 tgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    |||| |||| ||||||||||||||||||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||||||| ||| ||||    
T  49583890 tgtcccaaattataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaatgtaaagtgca 49583988  T
Q  338 ttcaatttgttctcctttttattttctc 365  Q
    ||||||||| |||  |||| ||||||||    
T  49583989 ttcaatttgctctgtttttcattttctc 49584016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 230 - 370
Target Start/End: Complemental strand, 54725806 - 54725665
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||| |||| ||||||||||||||| | ||||||||  ||||  ||||| |||||||||| |||| |||||||  ||   ||||||||||    
T  54725806 tcattttctttgtcccaaattataagcaaaaaagatctacttttatcatatttaattatattttttcaaa-aaattatctttttcaaaagaaaattaaat 54725708  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataa 370  Q
     |||| ||||||||||||| |||| ||||||||||||| ||||    
T  54725707 acaaagtgcattcaatttgctctcttttttattttctcaataa 54725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 45347875 - 45347814
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtt 289  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  45347875 tctcattttctttgtctcaaaatataagcaaaaaagatcaacttttatactatttttatgtt 45347814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 831 - 951
Target Start/End: Complemental strand, 47821026 - 47820897
Alignment:
Q  831 aaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggag---aaaaataaataccaggggaaatcggttgc--catatacaccgg 924  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||   ||||||| | |  ||||||||||||||||  || | |||||||    
T  47821026 aaatattattaaccaacaagcccgtgcaagacgcactaataagctcgggtggaggaaaaaaatacaaagaaggggaaatcggttgccgcacaaacaccgg 47820927  T
Q  925 ctcg-acaaaaacccctt--aaaaccaccc 951  Q
    |||| |||||||||||||  ||||||||||    
T  47820926 ctcgaacaaaaacccctttaaaaaccaccc 47820897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 822 - 914
Target Start/End: Complemental strand, 10454417 - 10454320
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg----agaaaaataaataccaggggaaatcggttgcca 914  Q
    |||| ||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||    | ||||||| |||| ||||||||||||||||||    
T  10454417 gaaatggcaaaatattattaaccaacaagcccgtgcaaggagcactaataagctcgggtgggaaaaaaaaaatacatacaaggggaaatcggttgcca 10454320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 235 - 431
Target Start/End: Complemental strand, 30454923 - 30454726
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaaga-ccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaa 331  Q
    ||||||||| |||| ||||||||||||| | ||||||||||   ||||  |||||||| ||||||| |||| |||||||| ||   ||||||||||||||    
T  30454923 ttctttgtcccaaattataagcaaaaaaaaaccaacttttagcatatttaattatgttgtttcaaa-aaattatcttttccaaaggaaaattaaatgcaa 30454825  T
Q  332 attgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    | ||||||||||||| ||||  ||| |||||||| ||||    |||||||| | |||| |||||||||||||| || ||| |||||  ||||| ||||||    
T  30454824 agtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatttcaaggataacaca 30454726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 826 - 945
Target Start/End: Complemental strand, 31525492 - 31525370
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgc--catatacacc 922  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||| ||||| ||||||| ||||| | | || ||||||||||||||||  || | ||| |    
T  31525492 cggcaaaatattattaaccaacaagcctgtgcaagaagcactaataagcttgggtgga-aaaaaaacaaacaaggggaaatcggttgccacacaaacaac 31525394  T
Q  923 ggctcg-acaaaaaccccttaaaa 945  Q
    |||||| |||||||||||||||||    
T  31525393 ggctcgaacaaaaaccccttaaaa 31525370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 480
Target Start/End: Complemental strand, 50651152 - 50650989
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  ||||  |||||||||||||||||    ||  |||||| |||| |||||||||||| | || ||| || |    
T  50651152 taaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttt 50651053  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    |  || || |||||| |||| ||||  ||||||  ||| || ||||||||||||||||||||||    
T  50651052 tgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgtga 50650989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 826 - 888
Target Start/End: Complemental strand, 52076194 - 52076131
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  52076194 cggcaaaatattactaaccaacaagcccgtgcgagaagcactaataagctcgggtggagaaaaa 52076131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 318 - 480
Target Start/End: Complemental strand, 8097132 - 8096970
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    ||||||||||||||| ||||||||||||| ||||  ||| |||||||| ||||    |||||||||| ||||||||||||||||| | || ||| |||||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T
Q  418 ctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
      ||||| ||||||  ||| |||    ||||  | || || ||||||||||||||||||||||    
T  8097032 tcaaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgtga 8096970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 305 - 395
Target Start/End: Original strand, 46303534 - 46303624
Alignment:
Q  305 tcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattttt 395  Q
    ||||||||||   |||||||||||||||||||||| |||||||| | |||  |||||||||||||||  ||||||||| |||||| |||||    
T  46303534 tcttttctaaagaaaaattaaatgcaaattgcatttaatttgttattcttcctattttctccataatcattaaccaataagaatttttttt 46303624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 371
Target Start/End: Complemental strand, 47444174 - 47444034
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt-----attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    ||||||||| |||| ||||||||||||| | ||||||||||  ||||     | |||||||||||||| |||| |||||||| ||   ||||||||||||    
T  47444174 ttctttgtcccaaattataagcaaaaaatatcaacttttatcatatttaattactatgttttttcaaa-aaattatcttttccaaaggaaaattaaatgc 47444076  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataat 371  Q
    ||| ||||||||||||| | || |||| |||||||| |||||    
T  47444075 aaagtgcattcaatttgctatctttttcattttctctataat 47444034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 317 - 480
Target Start/End: Original strand, 35963161 - 35963324
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    ||||||||||||||||||||||| |||||  ||||  ||| |||||||||||||    |||||||| | |||| ||||| |||||| | || ||| || |    
T  35963161 taaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttt 35963260  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    || ||  | |||||| |||| |||||  |||||  ||| || ||||||||||||||||||||||    
T  35963261 tccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35963324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 317 - 442
Target Start/End: Complemental strand, 20847383 - 20847259
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| |||||||||| | |||  ||| ||||||||||||||   | |||||||| |||| |||  ||||||| | |||||| ||||    
T  20847383 taaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatgaaacttat 20847284  T
Q  417 tctaaggagaacacataaaattatac 442  Q
    || || || |||||| ||||||||||    
T  20847283 tccaaagaaaacaca-aaaattatac 20847259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 25242292 - 25242239
Alignment:
Q  318 aaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||| |||||    
T  25242292 aaaattaaacgcaaagtgcattcaatttgttctcttttttattttctctataat 25242239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 33974783 - 33974738
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaactttt 273  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||    
T  33974783 tctcattttctttgtctcaaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 48291763 - 48291870
Alignment:
Q  256 caaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcct 353  Q
    ||||||||| ||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||||||| ||| ||||||||||||| |||| |    
T  48291763 caaaaaagatcaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaatggaaagtgcattcaatttgctctctt 48291861  T
Q  354 ttttatttt 362  Q
    ||| |||||    
T  48291862 tttcatttt 48291870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 828 - 945
Target Start/End: Complemental strand, 20701275 - 20701153
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtg--gagaaaaataaataccaggggaaatcggttgccata-tacaccg 923  Q
    |||||||||||||||||||| ||||||| | ||| ||||||| |||||||||||  || ||||||| | || ||||||||||| |||||| |  ||  ||    
T  20701275 gcaaaatattattaaccaacgagcccgtacaagaagcactaataagctcgggtgaagaaaaaaatacaaacaaggggaaatcgattgccacacaactacg 20701176  T
Q  924 gctcg-acaaaaaccccttaaaa 945  Q
    ||||| |||||||||||||||||    
T  20701175 gctcgaacaaaaaccccttaaaa 20701153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 826 - 945
Target Start/End: Complemental strand, 42882010 - 42881886
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaa---ataaataccaggggaaatcggttgcca-tataca 920  Q
    |||||||||||||||| ||||||||| ||| || |||||||||| ||||||||| ||| ||||   | |||||| ||||||||||| ||||||  |||||    
T  42882010 cggcaaaatattatta-ccaacaagctcgtacaagatgcactaaaaagctcgggaggaaaaaaaacacaaatacaaggggaaatcgattgccacaataca 42881912  T
Q  921 ccggctc-gacaaaaaccccttaaaa 945  Q
    |||||||  |||||||| ||||||||    
T  42881911 ccggctcaaacaaaaacgccttaaaa 42881886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 317 - 512
Target Start/End: Original strand, 47864200 - 47864395
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| |||||||||| |||||  ||| ||||| | ||||||   ||  |||||| |||| |||||||||||| | || ||| || |    
T  47864200 taaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctataaaactttt 47864299  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |  || || ||  || |||| |||||  |||||  | | || |||||||||||||||| ||||| ||  | |||||||||||||| ||||||||||    
T  47864300 ttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttttcttaataaatgtgattttttcttttttgcttataatttaggacgga 47864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 317 - 515
Target Start/End: Complemental strand, 54465010 - 54464812
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||| ||||||| ||||||||||  ||||  ||| | ||| |||||||    || |||| || |||| |||||||||||| | || ||  || |    
T  54465010 taaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat-aatttttt 54464912  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataaattaggacggagga 515  Q
    | ||| || |||||| |||||||||| ||||||  ||| || |||||||||||||||| |||||  ||  | |||||||||||||| |||||||||||||    
T  54464911 tttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtgattttttttttttttgcttataatttaggacggagga 54464812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 2927189 - 2927235
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||    
T  2927189 ctcattttctttgtcttaaaatataagcaaaaaagacaaacttttat 2927235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 14752431 - 14752385
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  14752431 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 14752385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 458 - 508
Target Start/End: Original strand, 45782321 - 45782371
Alignment:
Q  458 gttagttttcttaataagtgtgaattagtgttttttgcttataaattagga 508  Q
    |||| |||| ||||||| ||| |||||||||||||||||||||||||||||    
T  45782321 gttaatttttttaataaatgtaaattagtgttttttgcttataaattagga 45782371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 402
Target Start/End: Original strand, 10014238 - 10014357
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||||||||||| | || |||||||| ||   ||||||||| ||||| ||||||||||||  |||  ||||||||||||| |||||     |||||    
T  10014238 attatgttttttcaaa-agattatcttttccaaaggaaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaa 10014336  T
Q  382 tgagaattatttttacatctt 402  Q
    ||| |||| ||||||||||||    
T  10014337 tgaaaattgtttttacatctt 10014357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 11054494 - 11054454
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  11054494 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 11054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 824 - 941
Target Start/End: Complemental strand, 28957079 - 28956957
Alignment:
Q  824 aacggcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtg-gagaaaaataaataccaggggaaatcggttgc--catatac 919  Q
    |||| |||||||||||||||||||||| ||||||| ||  |||| | ||||||||||| || ||||| | | |  ||||||||||||||||  || | ||    
T  28957079 aacgacaaaatattattaaccaacaagtccgtgcaagaaacactgataagctcgggtgagaaaaaaaaacaaagaaggggaaatcggttgccacacaaac 28956980  T
Q  920 accggctcg-acaaaaacccctt 941  Q
    ||||||||| |||||||||||||    
T  28956979 accggctcgaacaaaaacccctt 28956957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 37074860 - 37074911
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||| |||||    
T  37074860 tcattttctttgtcccgaaatataagcaaaaaagacaaacttttatcctatt 37074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 46711881 - 46711830
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||| ||||||||||||||||||||||| |||| || ||||||||| |||||    
T  46711881 tcattttctttgtctcaaaatataagcataaaaaacaaacttttatcctatt 46711830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 6752681 - 6752779
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattatt 417  Q
    |||||||||||||||| |||||| |||  ||||  ||  |||||||||||||    || ||||| | |||| ||||||||||||||||||||| |||||    
T  6752681 aaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctttccatgaaacttatt 6752779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 375 - 481
Target Start/End: Original strand, 31292672 - 31292778
Alignment:
Q  375 taaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataa 474  Q
    |||||||||| |||| |||||||||||| ||||  || | |||| |||||||||| |  ||||||||| |||||| |  | || |||||||| | |||||    
T  31292672 taaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttttttcaataa 31292771  T
Q  475 gtgtgaa 481  Q
    |||||||    
T  31292772 gtgtgaa 31292778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 36546480 - 36546518
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaactttt 273  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  36546480 ttctttgtcccaaaatataagcaaaaaagacaaactttt 36546518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 36561835 - 36561797
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaactttt 273  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  36561835 ttctttgtcccaaaatataagcaaaaaagacaaactttt 36561797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 436
Target Start/End: Complemental strand, 46557216 - 46557166
Alignment:
Q  386 aattatttttacatctttccatgaaaattattctaaggagaacacataaaa 436  Q
    ||||||||||||||||| |||||||| ||||||||| || |||||| ||||    
T  46557216 aattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaaa 46557166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 6438092 - 6438177
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||||||||||||||||| |||| |||||  ||||  ||| |||||||||||||    || ||||||| |||| ||||||||||||    
T  6438092 taaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 6438177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 402
Target Start/End: Complemental strand, 34722720 - 34722635
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||||||||||| ||||| ||||||||||  ||||||||| ||||| | |||||    || ||||||| |||| ||||||||||||    
T  34722720 taaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatctt 34722635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 50730118 - 50730171
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 370  Q
    |||||||||||| ||||| ||||||||||  |||| |||||||||| |||||||    
T  50730118 taaaattaaatgtaaattacattcaattttctctcttttttattttttccataa 50730171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 50782736 - 50782683
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataa 370  Q
    |||||||||||| ||||| ||||||||||  |||| |||||||||| |||||||    
T  50782736 taaaattaaatgtaaattacattcaattttctctcttttttattttttccataa 50782683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 10227824 - 10228110
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  10227824 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatcttttccaatataaaattaaat 10227923  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||    
T  10227924 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcgatgaaacttatttcaaggagaa 10228023  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10228024 cactaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 10228110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 231 - 514
Target Start/End: Complemental strand, 17722051 - 17721768
Alignment:
Q  231 catattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgca 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||||    
T  17722051 catattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaagaaatcatattttccaatgtaaaattaaatgca 17721952  T
Q  331 aattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacac 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  17721951 aattgcattcaatttgttctcctttttattttctccataatttttaacaaatgagaattatttttacatgtttccatgaaacttattccaaggagaacac 17721852  T
Q  431 ataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    | ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17721851 aaaaaattatacctcaaatcactaagtattagttttcttaataagtgtgaattaatgttttttgcttataaattaggacggagg 17721768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 230 - 510
Target Start/End: Original strand, 12278620 - 12278900
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  12278620 tcatattctttgtctcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaaacaaatcattttttcaaatgtaaaattaaatgc 12278719  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  12278720 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacaactttccatgaaacttattctaaggagaaca 12278819  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
    || ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  12278820 caaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattgatgttttttgcttataaattaagacg 12278900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 234 - 514
Target Start/End: Original strand, 374017 - 374297
Alignment:
Q  234 attctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaat 333  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||    
T  374017 attctttatctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatattttccgatgtaaaattaaatgcaaat 374116  T
Q  334 tgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacata 433  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |    
T  374117 tgcattcaatttgttctcctttttattttctctataatttttaaccaatgaaaattatttatacatctttccatgaaacttattctaaggagaacacaaa 374216  T
Q  434 aaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||||||| | ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  374217 aaattatacctcaaataactaagtattagtttttttaataaatgtgaattagtgttttttgcttataaattaggacggagg 374297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 235 - 514
Target Start/End: Original strand, 30949054 - 30949333
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaatt 334  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  30949054 ttctttgtctcaaaatataagcaaaaaagactaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaagtt 30949153  T
Q  335 gcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataa 434  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||| ||    
T  30949154 gcatttaatttgttctcctttttattttctctataatttttaaccaatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaa 30949253  T
Q  435 aattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  30949254 aattatacctcaaatcaataaatgttagttttgttaataagtgtgaattagtattttttgcttataaattaggatggagg 30949333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 228 - 510
Target Start/End: Original strand, 30766358 - 30766640
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||| || ||||  ||| |||||||||||    
T  30766358 tctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttatgttattattatgttttttcaaagaaattatttttttcaatgtaaaattaaat 30766457  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  30766458 gcaaattgcattgaatttgttctcctttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttattccaaggagaa 30766557  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30766558 cacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaattaggacg 30766640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 238 - 473
Target Start/End: Original strand, 17598215 - 17598450
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  17598215 tttgtcccaaaatataagcaaaaaagaccaacttgtatgttattattatgttttttcaaacaaatcttcttttccaatgtaaaattaaatgcaaattgca 17598314  T
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || ||||||||| |||||    
T  17598315 ttcaatttattctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttattccaaagagaacacaaaaaat 17598414  T
Q  438 tatacctcaaatcattaagtgttagttttcttaata 473  Q
    |||||||||||||||||||||||| |||||||||||    
T  17598415 tatacctcaaatcattaagtgttaattttcttaata 17598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 31887365 - 31887079
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttt-caaacaaatcatcttttctaatctaaaattaaatg 328  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  31887365 tcattttctttgtctcaaattataagcataaaagaccaacttttatgctatttttatgtttttttcaaacaaatcatcttttccaatgtaaaattaaatg 31887266  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaac 428  Q
    ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||  ||  | |||    
T  31887265 caagttgcatttaatttgttctcttttttattttctccataatttttaaccaataaaaattatttttacatctttccatgaaacttattaaaaaaaaaac 31887166  T
Q  429 acataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    ||| ||||| |||  |||||||| | |||||||||||| ||||||||||| ||||| || ||||||||||||||||||| |||||||    
T  31887165 acaaaaaatcatatatcaaatcactgagtgttagttttattaataagtgtaaattaatgtttttttgcttataaattagaacggagg 31887079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 228 - 456
Target Start/End: Original strand, 33756168 - 33756396
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||| |||||||||||    
T  33756168 tctcatattctttatctcaaaatataagaaaaaaataccaacttttatgctattattatgttttttcaaacaaatcatttttttcaatgtaaaattaaat 33756267  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |  ||||||||    
T  33756268 gcaaattgcattcaatttgtcctccttttcattttctccataatttttaaccaatgagaattatttttacatctttgcataaaacttacttcaaggagaa 33756367  T
Q  428 cacataaaattatacctcaaatcattaag 456  Q
    || | ||||| ||||||||||||| ||||    
T  33756368 caaaaaaaataatacctcaaatcactaag 33756396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 390 - 514
Target Start/End: Complemental strand, 5121539 - 5121415
Alignment:
Q  390 atttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtt 489  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5121539 atttttacatctttccatgaaacttattttaaggagaacacaaaaaactatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgtt 5121440  T
Q  490 ttttgcttataaattaggacggagg 514  Q
    |||||||||||||||||||||||||    
T  5121439 ttttgcttataaattaggacggagg 5121415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 230 - 504
Target Start/End: Complemental strand, 32882925 - 32882660
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||  |||||||||||||||||||||||||||| || ||||           ||||| || |||||||||| ||  |||||||||||||    
T  32882925 tcattttctttgtcctaaaatataagcaaaaaagaccaacttttgtgttatt-----------tcaaaaaagtcatcttttccaaagtaaaattaaatgc 32882837  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataattttta--accaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||||||||||||||||| ||||  ||| |||||| |||  || |||||||||| ||||||||||||||||||||| ||||| || | ||||    
T  32882836 aaatcgcattcaatttgttctcctttctattccctctataattattataactaatgagaattgtttttacatctttccatgaaacttattttatgaagaa 32882737  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaatt 504  Q
    |||| ||||||||||||||||  |  | || || |||||||||||||||||||||| |  |||||||||||||||||    
T  32882736 cacaaaaaattatacctcaaactacaatgtttttgttttcttaataagtgtgaatttgaattttttgcttataaatt 32882660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 299 - 504
Target Start/End: Original strand, 21963941 - 21964145
Alignment:
Q  299 aaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttaca 398  Q
    |||||||||||| |||  |||||||||||| ||||| ||| |||||||||||| |||||||||||||||| ||   |||||||| | |||||||||||||    
T  21963941 aaatcatctttt-taaagtaaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatttttaca 21964039  T
Q  399 tctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgctta 498  Q
    ||||||||| ||| ||||| ||||||||||||| ||||||||| ||| ||| | || || |||||||| ||| |||||||||||| |  |||||||||||    
T  21964040 tctttccataaaacttattttaaggagaacacaaaaaattatatctctaattactatgttttagttttattagtaagtgtgaattggatttttttgctta 21964139  T
Q  499 taaatt 504  Q
    ||||||    
T  21964140 taaatt 21964145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 3888362 - 3888484
Alignment:
Q  250 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgt 347  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||| |||| |||||||  ||   ||||||||||||||| ||||||||||||||    
T  3888362 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatctttttcaaaggaaaattaaatgcaaagtgcattcaatttgt 3888460  T
Q  348 tctcctttttattttctccataat 371  Q
    |||| |||| |||||||| |||||    
T  3888461 tctctttttcattttctctataat 3888484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 229 - 402
Target Start/End: Original strand, 4031901 - 4032075
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| ||||||| |||||||| |||||||||||||| ||  ||||  ||||||||||||| || |||| |||||||| ||   |||||||||    
T  4031901 ctcattttctttatctcaaattataagcataaaagaccaactttaatcatatttaattatgttttttcgaa-aaattatcttttcaaagggaaaattaaa 4031999  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    |||||| ||||||||||||| |||| |||| |||||||| |||||     |||||||| |||| ||||||||||||    
T  4032000 tgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatctt 4032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 230 - 370
Target Start/End: Complemental strand, 5300836 - 5300696
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||| |||| |||||||||||| || ||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||||||    
T  5300836 tcattttctttgtcccaaattataagcaaaaa-gatcaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaagaaaattaaat 5300739  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataa 370  Q
     |||| ||||||||||||| |||  ||||||||||||| ||||    
T  5300738 acaaagtgcattcaatttgctcttttttttattttctcaataa 5300696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 319 - 514
Target Start/End: Complemental strand, 7275029 - 7274834
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    ||||||||| |||||| |||| |||||  ||||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| |||||||| ||||||    
T  7275029 aaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattc 7274930  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     || || || ||| |||| ||| |  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| ||||||||||||    
T  7274929 caaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggagg 7274834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 235 - 402
Target Start/End: Original strand, 4987863 - 4988031
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaa 332  Q
    ||||||||| |||| |||||  ||||||||| |||||||||  ||||  | |||||||||| ||| |||| |||||||  ||   |||||||||||||||    
T  4987863 ttctttgtcccaaattataaataaaaaagactaacttttatcatattcaaatatgtttttttaaa-aaattatctttttcaaaggaaaattaaatgcaaa 4987961  T
Q  333 ttgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
     ||||||||||||| |||| |||| |||||||| |||||     |||||||| |||||||||||||||||    
T  4987962 atgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatctt 4988031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 468 - 514
Target Start/End: Original strand, 17599464 - 17599510
Alignment:
Q  468 ttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17599464 ttaataagtgtgaattaatgttttttgcttataaattaggacggagg 17599510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 402
Target Start/End: Original strand, 16524349 - 16524467
Alignment:
Q  282 attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaa 381  Q
    |||||||||||||||| |||| || ||||| ||   ||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||     |||||    
T  16524349 attatgttttttcaaa-aaattattttttccaaaagaaaattaaatgcaaagtgcattcaatttgttct-cttttcattttctctataatcaactaccaa 16524446  T
Q  382 tgagaattatttttacatctt 402  Q
    ||| |||| ||||||||||||    
T  16524447 tgaaaattgtttttacatctt 16524467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 826 - 945
Target Start/End: Original strand, 33112718 - 33112843
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaata--ccaggggaaatcggttgccatatacac- 921  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||| ||  ||||| ||| |  | |||||||||||||||||||| | ||     
T  33112718 cggcaaaatattattaaccaacaagcccgtgcaagacgcactaaaaagcttgggggggaaaaaaaaaacaagcaaggggaaatcggttgccatacaaact 33112817  T
Q  922 -cggctcg-acaaaaaccccttaaaa 945  Q
      |||||| |||||||||||||||||    
T  33112818 ttggctcgaacaaaaaccccttaaaa 33112843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 35129211 - 35129013
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattattt-ttacatctttccatgaaaatta 415  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    |||||||||| |||| ||| ||||||||| | || ||| ||     
T  35129211 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaacttt 35129112  T
Q  416 ttctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    ||| || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| ||  ||||||||    
T  35129111 ttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgagacggagg 35129013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 826 - 882
Target Start/End: Complemental strand, 6575854 - 6575797
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgga 882  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||| ||| |||||||||    
T  6575854 cggcaaaatattattaatcaacaagcccgtgcaagaagcactaataagttcgggtgga 6575797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 514
Target Start/End: Original strand, 21542427 - 21542620
Alignment:
Q  321 attaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattcta 420  Q
    |||||||||||||| ||||||||||  | |   ||| ||||| |||||||    || ||||| | |||| |||||||||||| | || ||| || ||| |    
T  21542427 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttcca 21542526  T
Q  421 aggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    | || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| || |||||||||    
T  21542527 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttgggacggagg 21542620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 3095948 - 3095908
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  3095948 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 3095908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 7764089 - 7764141
Alignment:
Q  379 caatgagaattatttttacatctttccatgaaaattattctaaggagaacaca 431  Q
    |||||| |||||||||||||| |||| |||||| |||||| ||||||||||||    
T  7764089 caatgaaaattatttttacatttttcaatgaaatttattccaaggagaacaca 7764141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 830 - 952
Target Start/End: Complemental strand, 10247035 - 10246909
Alignment:
Q  830 aaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccata-tacaccggctc 927  Q
    |||||||||||||||||||||||||||| ||| ||||||| | | || |||||||||||| | | |  |||| |||||||||| || |  ||||||||||    
T  10247035 aaaatattattaaccaacaagcccgtgcaagaagcactaaaaggttcaggtggagaaaaa-acaaagaagggaaaatcggttgtcacacaacaccggctc 10246937  T
Q  928 g-acaaaaacccctt--aaaaccacccc 952  Q
    | |||||||||||||  |||||||||||    
T  10246936 gaacaaaaacccctttaaaaaccacccc 10246909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 945
Target Start/End: Complemental strand, 11546899 - 11546773
Alignment:
Q  823 aaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataa-ataccaggggaaatcggttgccat--ata 918  Q
    |||||||||||||||||||||  |||||||||||| ||  ||||||| |||||||||| |||||||| || | |  ||| ||||||||||| |||  | |    
T  11546899 aaacggcaaaatattattaactgacaagcccgtgcaagtagcactaataagctcgggt-gagaaaaaaaacaaagaaggagaaatcggttgtcatacaaa 11546801  T
Q  919 caccggctcg-acaaaaaccccttaaaa 945  Q
    |||||||||| |||||||| ||||||||    
T  11546800 caccggctcgaacaaaaactccttaaaa 11546773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 826 - 941
Target Start/End: Complemental strand, 15859230 - 15859106
Alignment:
Q  826 cggcaaaatattattaaccaa--caagcccgtgca-gatgcactaacaagctcgggtggagaaaaataa---ataccaggggaaatcggttgcc--atat 917  Q
    ||||||||||||||||| |||  |||||||||||| |  ||||||| ||||||||||||||||||| ||   | |  |||||||||||||||||  | |     
T  15859230 cggcaaaatattattaatcaaaacaagcccgtgcaaggcgcactaataagctcgggtggagaaaaaaaaaacaaagaaggggaaatcggttgccaaacaa 15859131  T
Q  918 acaccggctcg-acaaaaacccctt 941  Q
    ||||||||||| |||||||||||||    
T  15859130 acaccggctcgaacaaaaacccctt 15859106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 21542352 - 21542392
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  21542352 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 21542392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 512
Target Start/End: Complemental strand, 3095875 - 3095681
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| ||||||||   || ||||||| |||| |||||||||||| | || |||| | |    
T  3095875 taaaattaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat-aaaacttt 3095777  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    || || || |||||| |||| |||||  |||||  ||| |  |||||||||||||||| | ||| ||    |||||| ||||||| ||||||||||    
T  3095776 tccaaagaaaacacaaaaaactatactccaaatttttatgctttagttttcttaataaatatgatttttgtttttttacttataatttaggacgga 3095681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 1130433 - 1130479
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| |||| ||||||||||||| ||||||||||||    
T  1130433 ctcattttctttgtcccaaattataagcaaaaaaaaccaacttttat 1130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 5822266 - 5822182
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttc 311  Q
    ||||| |||| |||| |||| ||||| |||||||||| || ||||||  ||||  |||||||||||| ||| |||||||||||||    
T  5822266 ctcattttctctgtcccaaattataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttc 5822182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 411
Target Start/End: Complemental strand, 5881997 - 5881814
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||| |||| |||| ||||| |||||| ||| || ||||||  ||||  |||||||||||  ||| ||||||||||||| ||    | ||||||    
T  5881997 ctcattttctctgtcccaaattataaacaaaaatgactaatttttatcatatttaattatgtttttaaaaa-aaatcatcttttccaaagagagattaaa 5881899  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaa 411  Q
    ||||| || |||| | | || | ||| ||| |||||||| ||||||  |||||||| | |||| |||||||||||||| ||||||    
T  5881898 tgcaatttccatttattatgctatccctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaa 5881814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 16655200 - 16655245
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttct 364  Q
    ||||||||||||||||||||||| |||| ||||| ||| |||||||    
T  16655200 aaattaaatgcaaattgcattcattttgctctccctttcattttct 16655245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 323 - 480
Target Start/End: Complemental strand, 17751894 - 17751737
Alignment:
Q  323 taaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaag 422  Q
    |||||||||||| |||||||||| |||||  ||  ||||||||||||||   || |||||||| | | ||||||||| |||  |  ||| ||| |||||     
T  17751894 taaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacattttttaaaaaaacttaatctaaa 17751795  T
Q  423 gagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
    || |||||| |||| |||||  |||||  |||  | ||| ||||||||||||||||||    
T  17751794 gaaaacacaaaaaactatactccaaattcttatattttaattttcttaataagtgtga 17751737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 235; Significance: 1e-129; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 4543 - 4828
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||    
T  4543 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgtttttccaaacaaatcatctttcc-aatataaaattaaat 4641  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||    
T  4642 gcaaattgcattcaatgtgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttcgatgaaacttatttcaaggagaa 4741  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4742 cactaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 235; Significance: 1e-129; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 8146258 - 8145972
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  8146258 tctcatattctttgtcttaaaatataagcaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 8146159  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||    
T  8146158 gcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttatttcaaggagaa 8146059  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8146058 cacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtgaattaatgttttttgcttataaattaggacggagg 8145972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 35462963 - 35462678
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||||||    
T  35462963 tctcattttctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaaacatctttttcaatgtaaaattaaat 35462864  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  35462863 gcaaatttcattcaatttattatcctttttattttcttcataatttttaaccaatgagaattatttttacatctttccatgaaactta-tccaaggagaa 35462765  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35462764 aacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 35462678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 228 - 512
Target Start/End: Original strand, 13146643 - 13146927
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  13146643 tctcatattctttgtatcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 13146742  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||    
T  13146743 gtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctttccataaaacttattccaaagagaa 13146842  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| |||||    
T  13146843 cacaaaaaattatacctcaaatcactaagtgttagttttcataataagtatgaattagtattttttgcttataaattagaacgga 13146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 230 - 506
Target Start/End: Original strand, 20914775 - 20915051
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  20914775 tcattttctttgtcttaaaatataagcaaaaaataccaacttttatgctatttttatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgc 20914874  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  20914875 aagttgcatttaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaaca 20914974  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattag 506  Q
    || ||||||||| || |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20914975 caaaaaattatatcttaaatcactaagtgttagttttcttaataagtgtgaattagtattttttgcttataaattag 20915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 228 - 512
Target Start/End: Complemental strand, 31690865 - 31690581
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  31690865 tctcatattttttgtctcaaaatataaacaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 31690766  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| | |||| ||| ||||    
T  31690765 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttctataaaactcattccaagaagaa 31690666  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  31690665 cacaaaaaattatacctcaaatcactaagtattaattttcttaataagtgtgaattagtattttttgcttataaattaagacgga 31690581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 246 - 527
Target Start/End: Complemental strand, 31317028 - 31316746
Alignment:
Q  246 aaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaattt 345  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||| ||| |    
T  31317028 aaaatataagcaaaaaagatcaacttttatgttatttttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgcaagttgcatttaatct 31316929  T
Q  346 gttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctc 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  31316928 gttcacctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctc 31316829  T
Q  446 aaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga-ggagtagttaataat 527  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31316828 aaatcactaagtgttagttttcttaataactgtgaattagtgttttttgcttataaattaggacggagggagtagttaataat 31316746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 238 - 514
Target Start/End: Complemental strand, 8541799 - 8541523
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    ||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  8541799 tttgtcttaaaatataacaaaaaaagaccaacttttatgttattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaatgcaaattgca 8541700  T
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| |||| ||| |||||    
T  8541699 ttaaatttgttctccattttattttctccataatttttaaccaatgagaattatttttacatctttccaagaaacttattccaagaagaatacaaaaaat 8541600  T
Q  438 tatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8541599 tatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatgttttttgcttataaattaggacggagg 8541523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 228 - 515
Target Start/End: Original strand, 12638804 - 12639089
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||| ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || ||||  ||| |||||||||||    
T  12638804 tctcatattatttatctcaaaatataag-aaaaaagactaacttttatgctattattatgttttttcaaacaaattatttttttcaatgtaaaattaaat 12638902  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  12638903 gcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttattccaaggagaa 12639002  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    |||| ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12639003 cacaaaaaattatacctcaaataactaaatgttagttttcttaataagtgtgaattagtgtttttt-cttataaattaggacggagga 12639089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 230 - 514
Target Start/End: Complemental strand, 25962695 - 25962407
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  25962695 tcattttctttgtctcaaaatataagcaaaaaatacaaacttttatgctatttttatgttttttcaaacaaatcatctttttcaatgtaaaattaaatgc 25962596  T
Q  330 aaat----tgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggag 425  Q
    || |    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  25962595 aagtcatttgcatttaatttgttctactttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggag 25962496  T
Q  426 aacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  25962495 aacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtgaattattcttttttgcttataaattaggacggagg 25962407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 228 - 514
Target Start/End: Original strand, 42364953 - 42365235
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    ||||||||||||||||||||||| ||| |||||||||||    
T  42364953 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgttattgtt----tttttcaaacaaatcatcttttccaatgtaaaattaaat 42365048  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||    
T  42365049 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaataagaa 42365148  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    |||| |||||| |||||||||||| ||||| |||||||||||||||| | |||||||||||||||| |||||||||||| |||||||    
T  42365149 cacaaaaaattgtacctcaaatcactaagtattagttttcttaataaatatgaattagtgttttttacttataaattagaacggagg 42365235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 228 - 515
Target Start/End: Complemental strand, 16286328 - 16286041
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| |||||||  ||| |||||||||||    
T  16286328 tctcattttctttgtctcaaaatataagtaaaaaagacaaacttttatgcaatttttatgttttttcaaacaaattatctttttcaatgtaaaattaaat 16286229  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||    
T  16286228 gcaagttgcatttagtttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatcttttcatgaaacttattccaaagagaa 16286129  T
Q  428 cacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  16286128 cacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgtgaattaatgttttttacttataaattaggacggagga 16286041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 236 - 515
Target Start/End: Complemental strand, 24432637 - 24432358
Alignment:
Q  236 tctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattg 335  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||||||||||| ||| ||||||||||||||| |||    
T  24432637 tctttgtctcaaaatataagcaaaaaaaaccaacttttatactatttttatattttttcaaataaatcatcttttccaatgtaaaattaaatgcaagttg 24432538  T
Q  336 cattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaa 435  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||    
T  24432537 catttaatttgttatcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaa 24432438  T
Q  436 attatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||    
T  24432437 attatacctcaaatcactaagtgttagttttcttaataagtgtgaattaatctttttttattataaattaagacggagga 24432358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 228 - 514
Target Start/End: Complemental strand, 30086793 - 30086505
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaat 327  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  30086793 tctcgtattctttgtctcaaaatataagtaaaaaagaccaacttttatgtcattattatgttttttcaaacaaatcatcttttccaatgtaaaattaaat 30086694  T
Q  328 gcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaa 427  Q
     ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||  ||||||||    
T  30086693 acaaattgcattcaatttattctcctttttattttctccataatttttagccaatgagaattatttttacttctttccatgaaacttatttcaaggagaa 30086594  T
Q  428 cac-ataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtg-ttttttgcttataaattaggacggagg 514  Q
    ||| | ||||||||||||||||| | ||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  30086593 cacgaaaaaattatacctcaaattactaaatgttagttttcttaataagtgtgaattaatgtttttttgcttataaattagaacggagg 30086505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 230 - 490
Target Start/End: Complemental strand, 37066466 - 37066206
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgc 329  Q
    ||||||||||||||| |||||||||||||||||||| || |||| |||||||||||| ||||||||||||||| |||||||| ||| |||||||||||||    
T  37066466 tcatattctttgtcttaaaatataagcaaaaaagactaatttttttgctattattatattttttcaaacaaataatcttttccaatgtaaaattaaatgc 37066367  T
Q  330 aaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaaca 429  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| |||| |    
T  37066366 aaattgcattcaatttgttgtcctttttattttctccataatttttaaccaatgagaattatttttacatctttccacgaaacttattccaagaagaata 37066267  T
Q  430 cataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttt 490  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37066266 caaaaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattactgttt 37066206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 230 - 513
Target Start/End: Original strand, 24439488 - 24439771
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaa-acaaatcatcttttctaatctaaaattaaatg 328  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||| | ||  ||||||||||||    
T  24439488 tcattttctttgtcgcaaaatataagcaaaaaagatcaacttttatgttattattatgttttttcaacaaaaatcatctttccaaag-taaaattaaatg 24439586  T
Q  329 caaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaac 428  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||| |||| ||||||||||||||||||||| |||||| ||| | |||    
T  24439587 caaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctttccatgaaacttattccaagaataac 24439686  T
Q  429 acataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggag 513  Q
    ||| ||||||||| ||||||| || | || |||  ||| |||||||||||||| | |||||||||||||||||||||||||||||    
T  24439687 acaaaaaattatatctcaaattataatgttttaacttttttaataagtgtgaaattgtgttttttgcttataaattaggacggag 24439771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 238 - 512
Target Start/End: Original strand, 8143858 - 8144132
Alignment:
Q  238 tttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgca 337  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||  ||  |||||||||||  ||||||||    
T  8143858 tttgtcccataatataagcaaaaaagatcaacttttatgctattattatgttttttcaaataaatcttctttttcaaagtaaaattaaatataaattgca 8143957  T
Q  338 ttcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaat 437  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||  |||||| |||||| |||||| |||||| ||| | || ||| ||| |    
T  8143958 ttcaatttgttctacattttattttctccataatcattaaccaatgagaattcgttttacttctttctatgaaacttattccaagaaaaatacaaaaatt 8144057  T
Q  438 tatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |||||||||||| | || || ||| ||||||||||||||||  |||  || ||||| ||||||||||||||||||    
T  8144058 tatacctcaaattaatatgttttatttttcttaataagtgtacattgatggttttttcttataaattaggacgga 8144132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 245 - 418
Target Start/End: Complemental strand, 17825425 - 17825253
Alignment:
Q  245 caaaatataag-caaaaaagaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaat 343  Q
    ||||||||||| |||||||||| || |||||||||| ||||||  ||||||||||||||||| ||||  ||| |||||||||||||||||| ||||||||    
T  17825425 caaaatataaggcaaaaaagacaaatttttatgctaatattat--tttttcaaacaaatcatatttttcaatgtaaaattaaatgcaaattacattcaat 17825328  T
Q  344 ttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  17825327 ttgtcctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccctcaaacttattc 17825253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 283 - 512
Target Start/End: Complemental strand, 2002323 - 2002096
Alignment:
Q  283 ttatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaat 382  Q
    ||||||| ||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  2002323 ttatgttatttcaaaaaaatcatcttttccaaaataaaattaaatgcaaattgcattcaatttgttctcctttctattctctccataatcattaaccaat 2002224  T
Q  383 gagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaat 482  Q
     |||||| ||||||||||||||||| ||| ||||| |||| | |||||  |||||||||| ||||   | ||  | || |||||||||||||||||||||    
T  2002223 aagaattgtttttacatctttccataaaacttattttaagaaaaacac--aaaattatacttcaagctactatatttttgttttcttaataagtgtgaat 2002126  T
Q  483 tagtgttttttgcttataaattaggacgga 512  Q
    | ||||||||| |||||||||| |||||||    
T  2002125 ttgtgtttttttcttataaattgggacgga 2002096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 228 - 441
Target Start/End: Complemental strand, 20452668 - 20452468
Alignment:
Q  228 tctcatattctttgtctcaaaatataagcaaaaaa-gaccaacttttatgctattattatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||||||| ||||| |||||||||||| |||||| || ||| ||||||||| ||||||| |||||||||| || |||||| ||  | | ||||||||||    
T  20452668 tctcatattgtttgtttcaaaatataagtaaaaaaagatcaatttttatgctgttattatattttttcaaataattcatctctttcattgtaaaattaaa 20452569  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    || |||||| ||||||||||||              |||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| ||| |||    
T  20452568 tgtaaattgtattcaatttgtt--------------ctccataatttttaaccaataagaattatttttacttctttctatgaaacttattcgaagaaga 20452483  T
Q  427 acacataaaattata 441  Q
    |  || |||||||||    
T  20452482 atgcaaaaaattata 20452468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 401 - 514
Target Start/End: Complemental strand, 36414008 - 36413895
Alignment:
Q  401 tttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttata 500  Q
    ||||||||||| |||||| ||  | |||||| ||||||||| ||||||  | || || || |||||||||||||||||||||| |||||||||| |||||    
T  36414008 tttccatgaaacttattccaataaaaacacaaaaaattatatctcaaactactatgtttttgttttcttaataagtgtgaatttgtgttttttgtttata 36413909  T
Q  501 aattaggacggagg 514  Q
    ||||||||||||||    
T  36413908 aattaggacggagg 36413895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 28906984 - 28907122
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| || |||| ||||||||||||||||||||| ||||  ||||  |||||||||| ||||| |||| |||||||  |||  |||||||||    
T  28906984 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28907082  T
Q  327 tgcaaattgcattcaatttgttctccttttt-attttctc 365  Q
    |||||| |||||||||||||||||| ||||| ||||||||    
T  28907083 tgcaaagtgcattcaatttgttctcttttttcattttctc 28907122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 28943379 - 28943517
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| || |||| ||||||||||||||||||||| ||||  ||||  |||||||||| ||||| |||| |||||||  |||  |||||||||    
T  28943379 ctcattttctttatcccaaattataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaa-aaattatctttttcaatagaaaattaaa 28943477  T
Q  327 tgcaaattgcattcaatttgttctccttttt-attttctc 365  Q
    |||||| |||||||||||||||||| ||||| ||||||||    
T  28943478 tgcaaagtgcattcaatttgttctcttttttcattttctc 28943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 317 - 514
Target Start/End: Original strand, 42273654 - 42273847
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    ||||||||||||||||||||||||||||  |||||  ||| |||||||||||||    || ||||||| |||| ||||||||||||   || ||| || |    
T  42273654 taaaattaaatgcaaattgcattcaatt--ttctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 42273751  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||  | |||||||||||||| || |||||||||    
T  42273752 tccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgattt--ttttttttgcttataatttgggacggagg 42273847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 250 - 371
Target Start/End: Complemental strand, 3464040 - 3463917
Alignment:
Q  250 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgt 347  Q
    ||||||||||||||| ||||||||||  ||||  |||||||||||| ||| |||| || ||||| ||   ||||||||||||||| |||||||||||||     
T  3464040 tataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattattttttccaagaaaaaattaaatgcaaagtgcattcaatttgc 3463941  T
Q  348 tctcctttttattttctccataat 371  Q
    |||| |||| |||||||| |||||    
T  3463940 tctctttttcattttctctataat 3463917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 229 - 478
Target Start/End: Original strand, 32079421 - 32079670
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| ||||||||  |||| |||||||||||||||  ||||||| |  || |  |||||||| ||||||| || || |||||||||| || ||||||||    
T  32079421 ctcattttctttgttccaaattataagcaaaaaagataaacttttgtcatacttaattatgttatttcaaa-aactcgtcttttctaaactgaaattaaa 32079519  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattctaaggaga 426  Q
    ||||||||||||| |||||  ||||| | | ||||||||  ||||   ||| | |||| |||| ||||||||||||||||| ||| | |||  |||||||    
T  32079520 tgcaaattgcatttaattt-ctctccctctcattttctctgtaataaataatcgatgaaaattgtttttacatctttccattaaactaatttcaaggaga 32079618  T
Q  427 acacataaaattatacctcaaatcattaagtgttagttttcttaataagtgt 478  Q
    ||| | |||| ||||   ||||| || | || ||||||||||||||||||||    
T  32079619 acataaaaaactataatccaaattataatgttttagttttcttaataagtgt 32079670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 317 - 516
Target Start/End: Complemental strand, 43590118 - 43589919
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||  | || ||| || |    
T  43590118 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 43590019  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggaggag 516  Q
    || || || |||||| |||| |||||  |||||  ||| || |||||||||||||||||||||| ||    |||||||||||||| ||||||||||||||    
T  43590018 tcaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacggaggag 43589919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 32433570 - 32433628
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctattattatg 287  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  32433570 ctcatattctttgtctcaaaatataagcaaaaaagacaaatttttatactattattatg 32433628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 8959577 - 8959699
Alignment:
Q  250 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgt 347  Q
    ||||||||||||||||||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||||||| ||| ||| |||||||||     
T  8959577 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagaaaaattaaatgtaaagtgcgttcaatttgc 8959675  T
Q  348 tctcctttttattttctccataat 371  Q
    |||| |||  |||||||| |||||    
T  8959676 tctcttttccattttctctataat 8959699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 319 - 514
Target Start/End: Original strand, 20644021 - 20644217
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| ||||||||||   |||  ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |||    
T  20644021 aaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttc 20644120  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataaattaggacggagg 514  Q
     || || |||||| ||||||||||  |||||  ||| || ||||||||||||||||||||||  ||  | |||||||||||||| || |||||||||    
T  20644121 caaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgattttttttttttttgcttataatttgggacggagg 20644217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 831 - 945
Target Start/End: Original strand, 23172981 - 23173100
Alignment:
Q  831 aaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg-agaaaaataaataccaggggaaatcggttgcc--atatacaccggct 926  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||| | ||||||| | || ||| |||||| ||||||  ||| |||||||||    
T  23172981 aaatattattaaccaacaagcccgtgcaagaagcactaataagctcgggtggaaaaaaaatacaaacaaggagaaatcagttgccctataaacaccggct 23173080  T
Q  927 cg-acaaaaaccccttaaaa 945  Q
    || |||||| ||||||||||    
T  23173081 cgaacaaaacccccttaaaa 23173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 375 - 515
Target Start/End: Complemental strand, 30893348 - 30893209
Alignment:
Q  375 taaccaatgagaattatttttacatctttccatgaaaattattctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataa 474  Q
    |||||||| | |||||||||||||||||||||| ||| | |||||||| | ||||||  ||| |||||  ||||| || | || ||||||||||||||||    
T  30893348 taaccaataaaaattatttttacatctttccataaaattaattctaagaaaaacacaagaaactatactccaaattatcatgttttagttttcttaataa 30893249  T
Q  475 gtgtgaattagtgttttttgcttataaattaggacggagga 515  Q
    ||||||| || | |||||| ||||||| || ||||| ||||    
T  30893248 gtgtgaaataat-ttttttacttataatttgggacgaagga 30893209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 512
Target Start/End: Complemental strand, 11262040 - 11261846
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||| | || ||| || |    
T  11262040 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt 11261941  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacgga 512  Q
    |  || || |||||| ||||||||||  |||||  | | |||||||||| ||||||||||||| |||  | |||||||||||||| ||||||||||    
T  11261940 ttcaaagaaaacacaaaaaattatactccaaattctcatgtgttagtttacttaataagtgtg-attttttttttttgcttataatttaggacgga 11261846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 829 - 914
Target Start/End: Complemental strand, 22887337 - 22887251
Alignment:
Q  829 caaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggt-ggagaaaaataaataccaggggaaatcggttgcca 914  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||  |||| ||||| |||||||    
T  22887337 caaaatattattaaccaacaagcccgtgcgagatgcactaataagctcgggtgggagaaaaa-aaatataagggaaaatcagttgcca 22887251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 510
Target Start/End: Original strand, 25840871 - 25841062
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| |||| |||||  ||||  ||||||||| |||||||    |   |||||| |||| |||||||||||| |||||||| ||||||    
T  25840871 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccatgaaacttattc 25840970  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacg 510  Q
     || || |||||| |||| ||| |  |||||  ||| |  |||||||||||||||||||||| ||    |||||||||||||| ||||||||    
T  25840971 caaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgtgatttttgtttttttgcttataatttaggacg 25841062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 371
Target Start/End: Complemental strand, 16153590 - 16153447
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| || |||||| ||||  ||||||||||||||| |||||||||  ||||  |||||||||||||||| |||| |||||||| ||   |||||||||    
T  16153590 ctcattttgtttgtcccaaatgataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaaggaaaattaaa 16153492  T
Q  327 tgcaaattgcattcaatttgttctcctttttattttctccataat 371  Q
    | |||| |||||| |||||| |||| |||| | |||||| |||||    
T  16153491 tacaaagtgcatttaatttgctctctttttcactttctctataat 16153447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 402
Target Start/End: Complemental strand, 10154152 - 10153999
Alignment:
Q  250 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgt 347  Q
    |||||||||||||||| |||||||||  ||||  |||||||| ||||||| |||| |||| ||| ||   ||||||||||||||| |||||||||||||     
T  10154152 tataagcaaaaaagacaaacttttatcatatttaattatgttgtttcaaa-aaattatctcttccaaagaaaaattaaatgcaaagtgcattcaatttgc 10154054  T
Q  348 tctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    | ||  ||| |||||||| || |    |||||||||| |||| ||||||||||||    
T  10154053 tatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatctt 10153999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 479
Target Start/End: Original strand, 34425336 - 34425497
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    ||||||||||||||||||  |||||||||  ||||  ||||||||| ||||||||   || ||||||| |||| ||||||||| || | || ||| || |    
T  34425336 taaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctataaaactttt 34425434  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtg 479  Q
    |  || || |||||| |||| ||||| ||||||  ||| || |||||||||||||||||||||    
T  34425435 ttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg 34425497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 828 - 956
Target Start/End: Original strand, 819134 - 819266
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaataaataccaggggaaatcggttgccatatacaccggct 926  Q
    |||||||||||||| |||| ||| ||||| | || ||||||| ||| ||||||||| |||||  || || | |||||||||||||||| | |||||  ||    
T  819134 gcaaaatattattacccaataagtccgtgtaagaagcactaataagttcgggtggaaaaaaaataaaacaaagggaaatcggttgccacaaacaccaact 819233  T
Q  927 cg-acaaaaacccctt--aaaaccaccccacac 956  Q
    || |||||||||||||  |||||||||||||||    
T  819234 cgaacaaaaaccccttaaaaaaccaccccacac 819266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 831 - 913
Target Start/End: Original strand, 9931804 - 9931893
Alignment:
Q  831 aaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtgg--agaaaaataaat----accaggggaaatcggttgcc 913  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  ||||||| ||||    || |||||||||||||||||    
T  9931804 aaatattattaaccaacaagcccgtgcaagaagcactaacaagcttgggtgggaagaaaaaaaaatacaaacgaggggaaatcggttgcc 9931893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 829 - 953
Target Start/End: Complemental strand, 25539947 - 25539817
Alignment:
Q  829 caaaatattattaaccaacaagcccgtgca-gatgcactaacaagctcgggtggagaaaaat---aaataccaggggaaatcggttgccat-atacaccg 923  Q
    ||||||||||||| |||||||||||||||| || ||| ||| ||||||||||| | |||||    |||||| || |||||||||||||||| | ||| ||    
T  25539947 caaaatattatta-ccaacaagcccgtgcaagaagcattaataagctcgggtgaaaaaaaaacaaaaatacaagaggaaatcggttgccatcaaacatcg 25539849  T
Q  924 gctcg-acaaaaacccctt-aaaaccacccca 953  Q
    ||||| ||||||||||||| ||||||||||||    
T  25539848 gctcgaacaaaaaccccttaaaaaccacccca 25539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 346
Target Start/End: Original strand, 8506353 - 8506471
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaa 326  Q
    ||||| |||||| || |||| |||||| |||||||| |||||||| |  ||||  |||||||| ||||||| |||| |||||||| ||   |||||||||    
T  8506353 ctcattttctttctcccaaattataagtaaaaaagatcaacttttgtcatatttaattatgttgtttcaaa-aaattatcttttccaaagaaaaattaaa 8506451  T
Q  327 tgcaaattgcattcaatttg 346  Q
    |||||| |||||||||||||    
T  8506452 tgcaaagtgcattcaatttg 8506471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 431
Target Start/End: Complemental strand, 42104402 - 42104290
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||| | ||||||||||  || |  ||  |||||||||||||||  || ||||||| |||| |||||||||||| |||||||| || |||    
T  42104402 aaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaacttgttc 42104303  T
Q  419 taaggagaacaca 431  Q
     || |||||||||    
T  42104302 caaagagaacaca 42104290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 1144720 - 1144624
Alignment:
Q  250 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttg 346  Q
    ||||||||||||||||||||||||||  ||||  || ||| ||||||||| |||| |||||||| ||   ||||||||||||||| |||||||||||||    
T  1144720 tataagcaaaaaagaccaacttttatcatatttaataatg-tttttcaaa-aaattatcttttccaaagaaaaattaaatgcaaagtgcattcaatttg 1144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 42273546 - 42273629
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgcta-ttattatgttttttcaaacaaatcatcttttc 311  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| ||| ||| | |  ||||| ||| |||||||||||||    
T  42273546 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatttaatcttgtttttaaaaaaaatcatcttttc 42273629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 9957680 - 9957634
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  9957680 ctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 9957634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 8225361 - 8225406
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||    
T  8225361 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 8225406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 480
Target Start/End: Original strand, 17351395 - 17351556
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||| ||||| ||||||||||  ||||  | | ||||||||||||||   || ||||| | |||| ||||||||||||||||| ||| ||||||    
T  17351395 aaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccataaaacttattc 17351494  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga 480  Q
     || || || | | |||| |||||  ||| |  ||| || |||||||||||||||| |||||    
T  17351495 caacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataaatgtga 17351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 39505495 - 39505450
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||    
T  39505495 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 39505450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 914
Target Start/End: Complemental strand, 10431193 - 10431098
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaataa--ataccaggggaaatcggttgcca 914  Q
    ||||||| ||||||||||||| |||||| ||||||| ||| ||| ||| ||| ||||||||||||||| ||  | || ||| ||||||||||||||    
T  10431193 gaaacggaaaaatattattaatcaacaaacccgtgcaagaagcattaataagttcgggtggagaaaaaaaaacaaacaaggagaaatcggttgcca 10431098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 12730251 - 12730199
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  12730251 ctcattttctttgtcccaaaatataagtaaaaaagacaaacttttatcctatt 12730199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 826 - 916
Target Start/End: Original strand, 42241592 - 42241684
Alignment:
Q  826 cggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtg-gagaaaaataaataccaggggaaatcggttgccata 916  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||| |||||||| || || ||||||| | |  ||||||||||||| ||||||    
T  42241592 cggcaaaatattattaaccaataagtccgggcaagatgcactaataagctcggatgagaaaaaaatacaaagaaggggaaatcggtcgccata 42241684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 25840766 - 25840843
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttc 311  Q
    ||||||||| ||||||||||||||||| ||| ||||||||| |||||  ||  |||||||| ||| |||||||||||||    
T  25840766 ttctttgtcccaaaatataagcaaaaatgacaaacttttattctatttaatcttgtttttt-aaaaaaatcatcttttc 25840843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 20643911 - 20643957
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||||    
T  20643911 ctcattttctttatcccaaaatataagcaaaaaagacaaacttttat 20643957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 34425227 - 34425273
Alignment:
Q  229 ctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||| |||||||||  |||||||||||||||||||| |||||||||    
T  34425227 ctcattttctttgtcctaaaatataagcaaaaaagacaaacttttat 34425273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 38280748 - 38280794
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||||||||||||||||||  ||||||||| ||||||||| |||||    
T  38280748 ttctttgtctcaaaatataaataaaaaagacaaacttttatcctatt 38280794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 317 - 399
Target Start/End: Original strand, 38280852 - 38280934
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacat 399  Q
    ||||||||||||||||||  |||||||||  ||||  ||| ||||| ||||||||   |||||||||| |||| |||||||||    
T  38280852 taaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacat 38280934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 446043 - 445990
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatt 372  Q
    |||||||||| |||||||||||||||| |||||  ||| ||||||||| |||||    
T  446043 aaattaaatgaaaattgcattcaattttttctctctttcattttctccgtaatt 445990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 828 - 888
Target Start/End: Original strand, 3677795 - 3677855
Alignment:
Q  828 gcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    |||| ||||||||| ||||||||||| ||| ||||||||||| ||||||||||||| |||||    
T  3677795 gcaatatattatta-ccaacaagcccatgcgagatgcactaataagctcgggtggaaaaaaa 3677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 285 - 418
Target Start/End: Original strand, 8146696 - 8146829
Alignment:
Q  285 atgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatga 384  Q
    ||||| ||||||| ||||||| ||||  ||  | |||||||||||||||| || | |||||| ||||| | | |||||||||||||    ||||||||||    
T  8146696 atgttatttcaaaaaaatcatttttttcaaaatgaaattaaatgcaaattacaattaatttgctctccctctcattttctccataacagataaccaatga 8146795  T
Q  385 gaattatttttacatctttccatgaaaattattc 418  Q
     ||||  ||||| || ||||||| ||| ||||||    
T  8146796 aaatttattttaaatttttccataaaacttattc 8146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 15006450 - 15006413
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctt 354  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  15006450 taaaattaaatacaaattgcattcaatttgttatcctt 15006413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 483
Target Start/End: Original strand, 20039216 - 20039273
Alignment:
Q  426 aacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaatt 483  Q
    |||||| ||||||||||  |||||  ||| || |||||||||||||||||||||||||    
T  20039216 aacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtgaatt 20039273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 3105 - 3227
Alignment:
Q  250 tataagcaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttctaatctaaaattaaatgcaaattgcattcaatttgt 347  Q
    ||||||||||||||| ||||||||||  ||||  |||||||||||||||| |||| |||||||| ||   ||||||| ||||||| ||||||||||||||    
T  3105 tataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaa-aaattatcttttccaaagcaaaattatatgcaaagtgcattcaatttgt 3203  T
Q  348 tctcctttttattttctccataat 371  Q
    | || |||| |||||||| |||||    
T  3204 tttctttttcattttctctataat 3227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 729 - 532
Alignment:
Q  317 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattat 416  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| |||||||||||  | || ||| || |    
T  729 taaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttt 630  T
Q  417 tctaaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtga-attagtgttttttgcttataaattaggacggagg 514  Q
    |  || || ||||||||||| |||||  |||||  ||| || |||||||||||||||||||||| ||| || |||||||||||||| ||||||||||||    
T  629 ttcaaagaaaacacataaaactatactccaaattcttatgttttagttttcttaataagtgtgatatttgt-ttttttgcttataatttaggacggagg 532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 319 - 514
Target Start/End: Original strand, 157801 - 157995
Alignment:
Q  319 aaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaaattattc 418  Q
    |||||||||||||||| |||| |||||  ||||  ||||||||| |||||||    |  ||||||| |||| |||||||||||  |||||||| ||||||    
T  157801 aaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaaacttattc 157900  T
Q  419 taaggagaacacataaaattatacctcaaatcattaagtgttagttttcttaataagtgtgaattagtgttttttgcttataaattaggacggagg 514  Q
     || || |||||| |||| ||| |  |||||  ||| |  |||||||||||||||||| || |||  | |||||||||||||| |||| |||||||    
T  157901 caaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtatg-atttttattttttgcttataatttagaacggagg 157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 157697 - 157743
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  157697 ttctttgtcccaaaatataagcaaaaaagacaaacttttattctatt 157743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 910 - 961
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  910 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatt 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 8870 - 8921
Alignment:
Q  230 tcatattctttgtctcaaaatataagcaaaaaagaccaacttttatgctatt 281  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  8870 tcattttctttgtcccaaaatataagcaaaaaagacaaacttttatcctatt 8921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 77891 - 77931
Alignment:
Q  235 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 275  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  77891 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 77931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 888
Target Start/End: Original strand, 12894 - 12961
Alignment:
Q  822 gaaacggcaaaatattattaaccaacaagcccgtgc-agatgcactaacaagctcgggtggagaaaaa 888  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||| ||||| | |||| ||||||    
T  12894 gaaacggcaaaatattattagccaacaagcccgtacaagaagcactaataagcttgagtggggaaaaa 12961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 320 - 402
Target Start/End: Complemental strand, 3581 - 3499
Alignment:
Q  320 aattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 402  Q
    ||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||||||||||||||||    
T  3581 aattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatctt 3499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University