View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4607-Insertion-1 (Length: 1031)

Name: NF4607-Insertion-1
Description: NF4607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4607-Insertion-1
NF4607-Insertion-1
[»] chr1 (41 HSPs)
chr1 (414-865)||(29462487-29462937)
chr1 (213-417)||(29461783-29461987)
chr1 (8-212)||(29456945-29457149)
chr1 (864-948)||(5963041-5963125)
chr1 (863-946)||(50970743-50970826)
chr1 (869-946)||(21856508-21856585)
chr1 (143-232)||(29449134-29449223)
chr1 (864-983)||(15646619-15646742)
chr1 (869-943)||(4636439-4636513)
chr1 (869-946)||(8678544-8678621)
chr1 (869-946)||(17433680-17433757)
chr1 (864-946)||(29869618-29869700)
chr1 (864-946)||(39154485-39154567)
chr1 (869-946)||(5539819-5539896)
chr1 (869-946)||(9018976-9019053)
chr1 (869-946)||(17433219-17433296)
chr1 (869-946)||(18984122-18984199)
chr1 (869-946)||(21856045-21856122)
chr1 (869-946)||(26859062-26859139)
chr1 (869-946)||(29306956-29307033)
chr1 (869-946)||(29307407-29307484)
chr1 (869-946)||(29870084-29870161)
chr1 (869-946)||(39154022-39154099)
chr1 (862-946)||(5540283-5540367)
chr1 (869-941)||(15646195-15646267)
chr1 (874-946)||(33143925-33143997)
chr1 (869-941)||(33144389-33144461)
chr1 (864-946)||(18984584-18984666)
chr1 (869-946)||(8679006-8679083)
chr1 (869-946)||(9019428-9019505)
chr1 (865-982)||(15173095-15173216)
chr1 (869-946)||(50970281-50970358)
chr1 (869-941)||(47826967-47827039)
chr1 (869-948)||(5962581-5962660)
chr1 (8-42)||(29448994-29449028)
chr1 (864-982)||(52268288-52268410)
chr1 (869-946)||(2733422-2733499)
chr1 (869-946)||(15173559-15173635)
chr1 (869-946)||(26859524-26859601)
chr1 (47-94)||(29449062-29449109)
chr1 (502-560)||(29454488-29454546)
[»] chr8 (24 HSPs)
chr8 (864-980)||(33328156-33328276)
chr8 (869-946)||(9178100-9178177)
chr8 (869-946)||(31133685-31133762)
chr8 (869-985)||(41681137-41681257)
chr8 (863-946)||(13225104-13225187)
chr8 (869-946)||(11656458-11656535)
chr8 (869-982)||(31133223-31133340)
chr8 (869-946)||(9928912-9928989)
chr8 (869-946)||(19176293-19176370)
chr8 (869-946)||(19176755-19176832)
chr8 (869-946)||(34541013-34541090)
chr8 (869-946)||(41681599-41681676)
chr8 (866-946)||(12572316-12572396)
chr8 (735-853)||(26159175-26159294)
chr8 (869-940)||(33742925-33742996)
chr8 (864-946)||(44831245-44831327)
chr8 (864-941)||(8074021-8074098)
chr8 (869-946)||(12571866-12571943)
chr8 (869-946)||(33328605-33328682)
chr8 (863-946)||(9930122-9930205)
chr8 (863-946)||(11656922-11657005)
chr8 (869-946)||(4629800-4629877)
chr8 (870-942)||(13224645-13224716)
chr8 (869-945)||(44831711-44831787)
[»] chr5 (30 HSPs)
chr5 (854-948)||(5818917-5819011)
chr5 (869-946)||(2864757-2864834)
chr5 (869-946)||(8647903-8647980)
chr5 (865-946)||(15372338-15372419)
chr5 (863-985)||(16018586-16018711)
chr5 (865-946)||(18182969-18183050)
chr5 (869-946)||(2865220-2865297)
chr5 (869-946)||(5819394-5819471)
chr5 (869-946)||(14215708-14215785)
chr5 (869-946)||(18183434-18183511)
chr5 (869-946)||(19359601-19359678)
chr5 (869-985)||(15708974-15709094)
chr5 (864-946)||(8461396-8461478)
chr5 (869-946)||(164194-164271)
chr5 (869-946)||(8647441-8647518)
chr5 (869-946)||(24331562-24331639)
chr5 (869-982)||(24362261-24362378)
chr5 (869-940)||(4219666-4219737)
chr5 (869-946)||(19359139-19359216)
chr5 (708-757)||(37511204-37511253)
chr5 (869-941)||(6018317-6018389)
chr5 (869-979)||(14215244-14215358)
chr5 (872-982)||(24325218-24325332)
chr5 (872-982)||(24361843-24361957)
chr5 (864-946)||(29454738-29454820)
chr5 (864-946)||(29455207-29455289)
chr5 (869-946)||(8460933-8461010)
chr5 (869-941)||(4222192-4222264)
chr5 (828-866)||(15079021-15079059)
chr5 (869-942)||(7349486-7349559)
[»] chr3 (42 HSPs)
chr3 (866-946)||(41046700-41046780)
chr3 (862-946)||(20841026-20841110)
chr3 (869-946)||(17464494-17464571)
chr3 (862-946)||(32534955-32535039)
chr3 (860-946)||(5136974-5137060)
chr3 (869-946)||(4275829-4275906)
chr3 (869-946)||(20840563-20840640)
chr3 (869-982)||(24300981-24301098)
chr3 (869-946)||(31779117-31779194)
chr3 (869-946)||(32535428-32535505)
chr3 (869-946)||(43973444-43973521)
chr3 (862-946)||(37726925-37727009)
chr3 (863-946)||(39555575-39555658)
chr3 (864-946)||(27393659-27393741)
chr3 (869-946)||(25853237-25853314)
chr3 (869-946)||(39556042-39556119)
chr3 (869-946)||(43973905-43973982)
chr3 (869-941)||(51474804-51474876)
chr3 (864-943)||(27394045-27394124)
chr3 (869-948)||(29801879-29801958)
chr3 (863-946)||(31778650-31778733)
chr3 (866-948)||(25612440-25612522)
chr3 (864-946)||(30098228-30098310)
chr3 (872-946)||(48452995-48453069)
chr3 (869-946)||(22424817-22424894)
chr3 (869-942)||(37222040-37222113)
chr3 (869-946)||(37727395-37727472)
chr3 (870-982)||(22425238-22425354)
chr3 (862-942)||(23644458-23644538)
chr3 (869-985)||(30104485-30104605)
chr3 (869-941)||(51473431-51473503)
chr3 (869-932)||(23228486-23228549)
chr3 (862-945)||(24300553-24300635)
chr3 (867-941)||(32695704-32695778)
chr3 (869-946)||(23644930-23645007)
chr3 (869-946)||(25853692-25853769)
chr3 (861-946)||(26274562-26274647)
chr3 (869-914)||(26837852-26837897)
chr3 (869-946)||(29801359-29801436)
chr3 (869-982)||(50116834-50116951)
chr3 (869-946)||(5137446-5137523)
chr3 (865-946)||(26837359-26837440)
[»] chr7 (23 HSPs)
chr7 (863-946)||(37786764-37786847)
chr7 (865-946)||(19830419-19830500)
chr7 (869-946)||(19590528-19590605)
chr7 (869-946)||(19590990-19591067)
chr7 (869-946)||(34534256-34534333)
chr7 (863-979)||(19830848-19830967)
chr7 (864-946)||(4641438-4641520)
chr7 (869-946)||(23952733-23952811)
chr7 (862-948)||(29100314-29100400)
chr7 (869-946)||(32004617-32004694)
chr7 (869-946)||(35289366-35289443)
chr7 (869-946)||(38859106-38859183)
chr7 (879-946)||(29099863-29099930)
chr7 (869-946)||(2659305-2659382)
chr7 (869-946)||(32005079-32005156)
chr7 (869-946)||(34533794-34533871)
chr7 (863-946)||(38858640-38858723)
chr7 (869-946)||(2658842-2658919)
chr7 (869-946)||(35288906-35288983)
chr7 (865-933)||(4478178-4478246)
chr7 (869-941)||(28584392-28584464)
chr7 (869-945)||(37787233-37787309)
chr7 (869-941)||(38160954-38161026)
[»] scaffold0417 (1 HSPs)
scaffold0417 (869-946)||(11088-11165)
[»] chr4 (37 HSPs)
chr4 (865-946)||(54995532-54995613)
chr4 (860-946)||(12234794-12234880)
chr4 (869-946)||(20470976-20471053)
chr4 (864-946)||(18751597-18751679)
chr4 (865-946)||(4220024-4220105)
chr4 (869-946)||(15523238-15523315)
chr4 (869-946)||(23494908-23494985)
chr4 (869-946)||(45082889-45082966)
chr4 (862-946)||(22170402-22170485)
chr4 (869-948)||(25447699-25447778)
chr4 (863-946)||(48526646-48526729)
chr4 (869-943)||(11153615-11153689)
chr4 (869-946)||(12234332-12234409)
chr4 (869-946)||(18763985-18764062)
chr4 (869-946)||(22434182-22434259)
chr4 (869-946)||(25447250-25447327)
chr4 (869-946)||(46193870-46193947)
chr4 (865-985)||(22434599-22434722)
chr4 (869-985)||(48526199-48526319)
chr4 (863-985)||(2118717-2118843)
chr4 (864-982)||(15523659-15523781)
chr4 (864-933)||(16318254-16318323)
chr4 (869-946)||(25937673-25937750)
chr4 (869-946)||(33109929-33110006)
chr4 (869-946)||(38962284-38962361)
chr4 (869-946)||(46193408-46193485)
chr4 (869-946)||(51021260-51021337)
chr4 (865-946)||(54995068-54995149)
chr4 (869-941)||(2118296-2118368)
chr4 (863-942)||(25938140-25938219)
chr4 (869-942)||(4219560-4219633)
chr4 (869-946)||(23494446-23494523)
chr4 (869-946)||(33109687-33109764)
chr4 (862-946)||(11153142-11153226)
chr4 (869-941)||(48293597-48293669)
chr4 (863-941)||(16690933-16691011)
chr4 (869-942)||(48708298-48708371)
[»] scaffold0027 (2 HSPs)
scaffold0027 (864-946)||(42167-42249)
scaffold0027 (869-985)||(42580-42700)
[»] chr6 (29 HSPs)
chr6 (867-945)||(18504920-18504998)
chr6 (869-946)||(11445452-11445529)
chr6 (869-946)||(23075593-23075670)
chr6 (863-946)||(20741569-20741652)
chr6 (864-946)||(15828106-15828188)
chr6 (869-946)||(2319675-2319752)
chr6 (869-946)||(10900395-10900472)
chr6 (869-946)||(12935160-12935237)
chr6 (869-946)||(22219818-22219895)
chr6 (868-946)||(10899941-10900019)
chr6 (864-946)||(23073997-23074079)
chr6 (869-946)||(4811721-4811798)
chr6 (869-982)||(11277007-11277124)
chr6 (869-946)||(12935622-12935699)
chr6 (869-946)||(18257140-18257217)
chr6 (869-946)||(18257602-18257679)
chr6 (869-942)||(18505388-18505461)
chr6 (869-946)||(20741103-20741180)
chr6 (867-946)||(2322683-2322762)
chr6 (864-942)||(31470313-31470391)
chr6 (869-946)||(1149468-1149545)
chr6 (869-946)||(1149897-1149974)
chr6 (869-985)||(28472640-28472760)
chr6 (869-985)||(29859829-29859949)
chr6 (864-941)||(3835196-3835273)
chr6 (869-946)||(31470781-31470858)
chr6 (869-940)||(15827641-15827712)
chr6 (869-946)||(11444990-11445067)
chr6 (869-942)||(29033437-29033510)
[»] scaffold0951 (2 HSPs)
scaffold0951 (869-946)||(2132-2209)
scaffold0951 (869-941)||(1670-1742)
[»] scaffold0295 (2 HSPs)
scaffold0295 (869-946)||(4796-4873)
scaffold0295 (869-945)||(5257-5333)
[»] scaffold0113 (1 HSPs)
scaffold0113 (861-946)||(28708-28793)
[»] chr2 (36 HSPs)
chr2 (869-946)||(11090985-11091062)
chr2 (869-946)||(22374323-22374400)
chr2 (863-948)||(40027603-40027688)
chr2 (858-946)||(11090513-11090601)
chr2 (869-945)||(40815348-40815424)
chr2 (590-676)||(9363209-9363293)
chr2 (863-982)||(20444746-20444869)
chr2 (865-944)||(40815812-40815891)
chr2 (864-946)||(40027138-40027220)
chr2 (869-946)||(28616616-28616693)
chr2 (865-985)||(3025465-3025589)
chr2 (414-508)||(9363367-9363454)
chr2 (866-946)||(14432142-14432222)
chr2 (869-941)||(18451301-18451373)
chr2 (868-950)||(8425357-8425439)
chr2 (864-946)||(18450828-18450910)
chr2 (869-946)||(20440496-20440573)
chr2 (869-946)||(22374790-22374867)
chr2 (869-946)||(26538544-26538621)
chr2 (869-946)||(239356-239432)
chr2 (869-946)||(1978111-1978188)
chr2 (869-946)||(7446811-7446888)
chr2 (869-942)||(35781132-35781205)
chr2 (869-946)||(43058336-43058413)
chr2 (869-941)||(15551502-15551574)
chr2 (361-407)||(9295291-9295337)
chr2 (864-946)||(26538095-26538177)
chr2 (864-946)||(28617079-28617161)
chr2 (873-946)||(239817-239890)
chr2 (869-942)||(1978578-1978651)
chr2 (869-946)||(28847160-28847237)
chr2 (869-946)||(43058797-43058874)
chr2 (869-933)||(14432619-14432683)
chr2 (869-941)||(35779711-35779783)
chr2 (864-946)||(7446340-7446422)
chr2 (868-942)||(8425829-8425903)
[»] scaffold0007 (2 HSPs)
scaffold0007 (863-946)||(64770-64853)
scaffold0007 (864-946)||(64300-64382)
[»] scaffold1585 (1 HSPs)
scaffold1585 (869-942)||(570-643)
[»] scaffold0176 (2 HSPs)
scaffold0176 (869-946)||(19086-19163)
scaffold0176 (863-945)||(18832-18914)
[»] scaffold0273 (1 HSPs)
scaffold0273 (869-982)||(4632-4749)
[»] scaffold0019 (1 HSPs)
scaffold0019 (869-943)||(134141-134215)
[»] scaffold1223 (2 HSPs)
scaffold1223 (869-946)||(756-833)
scaffold1223 (869-946)||(1206-1283)
[»] scaffold0432 (2 HSPs)
scaffold0432 (862-946)||(9928-10012)
scaffold0432 (869-985)||(10294-10414)
[»] scaffold0076 (1 HSPs)
scaffold0076 (859-946)||(8474-8561)


Alignment Details
Target: chr1 (Bit Score: 329; Significance: 0; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 414 - 865
Target Start/End: Original strand, 29462487 - 29462937
Alignment:
Q  414 ctcagagccagaatagaatattgaagatgaagaaaaaagaaattgaagatcggataccagatgtacgtgtcttcttttcttcccttttatttggtgtatc 513  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||||    
T  29462487 ctcagagccagaatagaatattgaagatgaagaaaaaagaaattgaagatcggataccaga----cgtgtcttcttttctttccttttatttggtgtatc 29462582  T
Q  514 acttgctctataattgcgaggatcctgcgacacttgttatacgcaattnnnnnnn-ggcatgtttgtcgttttgaggtaacaaagtgttgaaaaatggcc 612  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |||||    
T  29462583 acttgctctataattgcgaggatcctgcaacacttgttatacgcaataaaaaaaaaggcatgtttgtcgttttgaggtaacaaagtgttgaaaa-tggcc 29462681  T
Q  613 tatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgtacgcaannnnnnnnn---atgaaaataaatttaacac 709  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||    
T  29462682 tatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgtacgcatttttttttttttatgaaaataaatttaacac 29462781  T
Q  710 tcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacaaggtggctagcataagaattggcctccctagcgaagctatgagcaac 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29462782 tcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacatggtggctagcataagaattggcctccctagcgaagctatgagcaac 29462881  T
Q  810 catatgctcttgtctgtaaataaactttacctcaaagttacattacaaatttaaaa 865  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  29462882 catatgctcttgtctgcaaataaactttacttcaaagttacattgcaaatttaaaa 29462937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 213 - 417
Target Start/End: Original strand, 29461783 - 29461987
Alignment:
Q  213 gactttgactgccattccttgtgcctaaggttgttttatagatccaatagaagaaatagatacgatgtgtgtgttgttataagaagtggcagattattat 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29461783 gactttgactgccattccttgtgcctaaggttgttttatagatccaatagaagaaatagatacgatgtgtgtgttgttataagaagtggcagattattat 29461882  T
Q  313 tgataaatgtgtgctgtgtgtcagtttaagagttgacctgtgactagctaaagaaagaatcttggtatgaattgttttgtttccattcattgtttgagat 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29461883 tgataaatgtgtgctgtgtgtcagtttaagagttgacctgtgactagctaaagaaagaatcttggtatgaattgttttgtttccattcattgtttgagat 29461982  T
Q  413 cctca 417  Q
    |||||    
T  29461983 cctca 29461987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 29456945 - 29457149
Alignment:
Q  8 aatctcaacttccattttaaagaagcaaaggtactgcataaatttgtactcgcaaaagaaacctacaaagtattttcacacaaaaacacccnnnnnnnat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  29456945 aatctcaacttccattttaaagaagcaaaggtactgcataaatttgtactcgcaaaagaaacctacaaagtattttcacacaaaaacaccctttttttat 29457044  T
Q  108 catgtcttgaatacgtgctcagactaaaaattatgatattttttctacaaggtatgttttatattgtaatatcataatgtggactattattccttttctg 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29457045 catgtcttgaatacgtgctcagactaaaaattatgatattttttctacaaggtatgttttatgttgtaatatcataatgtggactattattccttttctg 29457144  T
Q  208 ctgta 212  Q
    |||||    
T  29457145 ctgta 29457149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 864 - 948
Target Start/End: Complemental strand, 5963125 - 5963041
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||| | |||||||| |||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctt 5963041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 50970826 - 50970743
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| ||||||||||||    
T  50970826 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtc 50970743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 21856585 - 21856508
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | | |||||||||| ||||||||||||||| ||||||||||||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtc 21856508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 29449134 - 29449223
Alignment:
Q  143 atattttttctacaaggtatgttttatattgtaatatcataatgtggactattattccttttctgctgtagactttgactgccattcctt 232  Q
    |||||||||||||||  || ||||||| |||||||||||||| ||||||| ||| ||||||| ||||||||||||||| |||||| ||||    
T  29449134 atattttttctacaaattaagttttatgttgtaatatcataaggtggactcttaatccttttatgctgtagactttgaatgccatccctt 29449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 864 - 983
Target Start/End: Complemental strand, 15646742 - 15646619
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatctttttt 961  Q
    |||| ||||||||||||||||| ||||||||||| |||| | |||||||||||| | || |||||||||| ||||||||||| |||| | |||| |||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 15646643  T
Q  962 g-tgca-ttttcgtcctaccccca 983  Q
    | |||| |||||||||||||||||    
T  15646642 gttgcatttttcgtcctaccccca 15646619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 869 - 943
Target Start/End: Complemental strand, 4636513 - 4636439
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacg 943  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacg 4636439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 8678544 - 8678621
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtc 8678621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 17433757 - 17433680
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| |||||||| || |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 17433680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 29869618 - 29869700
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtc 29869700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 39154567 - 39154485
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||||||||||| ||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtc 39154485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 5539819 - 5539896
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtc 5539896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 9018976 - 9019053
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  |||| |||||||||| ||||||||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtc 9019053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 17433219 - 17433296
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||| ||||||| |||| | | |||||||| |||||| |||||||||| ||||||||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtc 17433296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 18984122 - 18984199
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 18984199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 21856045 - 21856122
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 21856122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 26859062 - 26859139
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| || |||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtc 26859139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 29306956 - 29307033
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| ||||| | |||||||||| ||||||||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtc 29307033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 29307484 - 29307407
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| |||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 29307407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 29870161 - 29870084
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||||| ||||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtc 29870084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 39154022 - 39154099
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||  || ||||||| | || | ||||||||||||||||| |||||||||| ||||||||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtc 39154099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 862 - 946
Target Start/End: Complemental strand, 5540367 - 5540283
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || || | |||||||||| || |||||||||    
T  5540367 aaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtc 5540283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 15646195 - 15646267
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaa 15646267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 874 - 946
Target Start/End: Original strand, 33143925 - 33143997
Alignment:
Q  874 tacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 33143997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 869 - 941
Target Start/End: Complemental strand, 33144461 - 33144389
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 33144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 18984666 - 18984584
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtc 18984584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 8679083 - 8679006
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||| ||||| || |||| |||||||||| ||||||| ||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtc 8679006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 9019505 - 9019428
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | || |||||| |  |||| |||||||||| ||||||||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtc 9019428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 865 - 982
Target Start/End: Original strand, 15173095 - 15173216
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacgg-tcttc-agtatcttttttg 962  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| ||||||||   |||||||||| ||||| | |||| ||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttg 15173194  T
Q  963 -tgca-ttttcgtcctaccccc 982  Q
     |||| ||||||||||||||||    
T  15173195 ttgcatttttcgtcctaccccc 15173216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 50970281 - 50970358
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  ||||||| || ||||||||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtc 50970358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 47826967 - 47827039
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| |||||||||||  ||| | |||||| || ||||||| |||||||| |||||||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 869 - 948
Target Start/End: Original strand, 5962581 - 5962660
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    ||||||||| ||||||| |||||||| ||  ||||| ||||||||| ||  ||| |||||||||| ||||||||||||||    
T  5962581 ttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctt 5962660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 29448994 - 29449028
Alignment:
Q  8 aatctcaacttccattttaaagaagcaaaggtact 42  Q
    |||||||||||||||||||||||||||||||||||    
T  29448994 aatctcaacttccattttaaagaagcaaaggtact 29449028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 982
Target Start/End: Original strand, 52268288 - 52268410
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc-ttcag-tatctttttt 961  Q
    |||| ||||||||||||||||| ||||| ||||| |||  | |||||| || || |||| |||||||||| |||||||| ||| ||||| |||| |||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcattttt 52268387  T
Q  962 g-tgca-ttttcgtcctaccccc 982  Q
    | |||| ||||||||||||||||    
T  52268388 gttgcacttttcgtcctaccccc 52268410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 2733499 - 2733422
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||||| || |||||||| ||||||  ||||| || || |||| |||||||||| ||||||||||||    
T  2733499 ttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtc 2733422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 15173635 - 15173559
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | || |||||| || |||| |||||||||| ||||||| ||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtc 15173559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 26859601 - 26859524
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | |||||||||||  ||| | |||||||| ||| |||| |||||||||| ||||| ||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtc 26859524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 29449062 - 29449109
Alignment:
Q  47 aaatttgtactcgcaaaagaaacctacaaagtattttcacacaaaaac 94  Q
    |||| |||||| ||||||||||||||||| | ||||||||||||||||    
T  29449062 aaatatgtacttgcaaaagaaacctacaaggcattttcacacaaaaac 29449109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 502 - 560
Target Start/End: Original strand, 29454488 - 29454546
Alignment:
Q  502 atttggtgtatcacttgctctataattgcgaggatcctgcgacacttgttatacgcaat 560  Q
    ||||||||||||||||| ||| ||||||| ||||||||||| ||| || |||| |||||    
T  29454488 atttggtgtatcacttggtctgtaattgctaggatcctgcggcacctgctataagcaat 29454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 1e-25; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 864 - 980
Target Start/End: Original strand, 33328156 - 33328276
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatctttttt 961  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||||| ||||||||||| |||| |||||| |||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  962 g-tgca-ttttcgtcctaccc 980  Q
    | |||| ||||||||||||||    
T  33328256 gttgcatttttcgtcctaccc 33328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 9178177 - 9178100
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| | |||||||| ||||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtc 9178100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 31133762 - 31133685
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtc 31133685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 869 - 985
Target Start/End: Original strand, 41681137 - 41681257
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||| |||| | |||| |||||| |||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  41681237 atttttcgtcctacccccatt 41681257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 13225187 - 13225104
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  13225187 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtc 13225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 11656458 - 11656535
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||  ||||||||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtc 11656535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 982
Target Start/End: Original strand, 31133223 - 31133340
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||| ||  ||| |||||||||| |||||||| || |||| |||||| |||||| |||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  966 a-ttttcgtcctaccccc 982  Q
    | ||||||||||||||||    
T  31133323 atttttcgtcctaccccc 31133340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 9928912 - 9928989
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 9928989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 19176293 - 19176370
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| ||||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtc 19176370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 19176832 - 19176755
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||| ||||| || |||| |||||||||| ||||||||||||    
T  19176832 ttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtc 19176755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 34541090 - 34541013
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||||||||||| ||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtc 34541013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 41681676 - 41681599
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || | || |||||||||| ||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtc 41681599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 866 - 946
Target Start/End: Complemental strand, 12572396 - 12572316
Alignment:
Q  866 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||| |||||||||||  ||| | ||||||||  ||||||  |||||||||| ||||||||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtc 12572316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 735 - 853
Target Start/End: Complemental strand, 26159294 - 26159175
Alignment:
Q  735 aatacaaagaggaacataatcatgaacaaggtggctagcataagaattggc-ctccctagcgaagctatgagcaaccatatgctcttgtctgtaaataaa 833  Q
    ||||||| |||||||||||||||||||  ||||||||| ||||||||||||   ||||||| || |||||||| |||| || | |||||||    |||||    
T  26159294 aatacaaggaggaacataatcatgaacttggtggctagaataagaattggcaaaccctagctaaactatgagctaccaaattcgcttgtctccgtataaa 26159195  T
Q  834 ctttacctcaaagttacatt 853  Q
    ||| |||| |||||||||||    
T  26159194 cttcacctaaaagttacatt 26159175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 869 - 940
Target Start/End: Original strand, 33742925 - 33742996
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaa 940  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa 33742996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 44831245 - 44831327
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||| ||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtc 44831327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 864 - 941
Target Start/End: Complemental strand, 8074098 - 8074021
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    |||| ||| ||| ||||||||| ||||||||||| |||||| |||||| |||||||| | |||||||||| |||||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaa 8074021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 12571866 - 12571943
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  | || |||||||||| ||||||||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtc 12571943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 33328682 - 33328605
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||||| ||||||||||  |||| | ||||||||  ||||||  |||||||||||||||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtc 33328605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 9930205 - 9930122
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| ||||| ||||| |||| | ||||||||| || |||| |||||||| | ||||||| ||||    
T  9930205 aaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtc 9930122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 11657005 - 11656922
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| ||  | | |||||||||| ||||||| ||||    
T  11657005 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtc 11656922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 4629800 - 4629877
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| |||||||  ||||||||||||| | |||| ||||||||| || |||| |||||||| | ||||||||||||    
T  4629800 ttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtc 4629877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 942
Target Start/End: Original strand, 13224645 - 13224716
Alignment:
Q  870 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaac 13224716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 945
Target Start/End: Complemental strand, 44831787 - 44831711
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    ||||| ||||||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggt 44831711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 2e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 854 - 948
Target Start/End: Original strand, 5818917 - 5819011
Alignment:
Q  854 acaaatttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||||    
T  5818917 acaaatttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctt 5819011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 2864757 - 2864834
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| || |||||||| |||| | |||||| |||||||||| |||||||||||||||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtc 2864834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 8647980 - 8647903
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtc 8647903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 865 - 946
Target Start/End: Complemental strand, 15372419 - 15372338
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  15372419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 15372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 863 - 985
Target Start/End: Original strand, 16018586 - 16018711
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttt 960  Q
    ||||| |||||||||||||||||  |||||||||| |||||| |||||| |||||||||| |||||||| | ||||||||||| |||| | ||| |||||    
T  16018586 aaaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattatattttt 16018685  T
Q  961 tgtgcatttt-cgtcctacccccatt 985  Q
      |||||||| |||||||||||||||    
T  16018686 attgcattttccgtcctacccccatt 16018711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 865 - 946
Target Start/End: Original strand, 18182969 - 18183050
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||||  |||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  18182969 aggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 18183050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 2865297 - 2865220
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 2865220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 5819471 - 5819394
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 5819394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 14215785 - 14215708
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtc 14215708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 18183511 - 18183434
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 18183434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 19359678 - 19359601
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 19359601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 869 - 985
Target Start/End: Original strand, 15708974 - 15709094
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| || |||||||| |||| | ||||||||| | ||||| |||||||||| ||||||||||| |||| | |||| |||||| |||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  966 at-tttcgtcctacccccatt 985  Q
    || ||||||||||||||||||    
T  15709074 atatttcgtcctacccccatt 15709094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 8461478 - 8461396
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||||||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtc 8461396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 164194 - 164271
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| ||||| |||| ||||||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtc 164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 8647441 - 8647518
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtc 8647518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 24331562 - 24331639
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 24331639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 982
Target Start/End: Complemental strand, 24362378 - 24362261
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||| ||||| |||| | ||||||||| || |||| |||||||||| || |||||||| |||| |||||| |||||| |||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  966 a-ttttcgtcctaccccc 982  Q
    | ||||||||||||||||    
T  24362278 atttttcgtcctaccccc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 869 - 940
Target Start/End: Original strand, 4219666 - 4219737
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaa 940  Q
    ||||||||||||||| | |||||||||||  |||||||| ||| || |||||||||||||||||| ||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaa 4219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 19359139 - 19359216
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||| |||||||| | ||||||||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtc 19359216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 708 - 757
Target Start/End: Original strand, 37511204 - 37511253
Alignment:
Q  708 actcatttcattaatcaatgaagagttaatacaaagaggaacataatcat 757  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  37511204 actcatttcgttaatcaataaaaagttaatacaaagaggaacataatcat 37511253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 6018317 - 6018389
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||| |||||||||||||||||||  ||| | ||||||||| ||||| | |||||||||| |||||||    
T  6018317 ttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaa 6018389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 869 - 979
Target Start/End: Original strand, 14215244 - 14215358
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttcag-tatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| | || || |||||||||| ||||||| ||| |||||| |||| |||||| |||    
T  14215244 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgc 14215343  T
Q  966 a-ttttcgtcctacc 979  Q
    | |||||||||||||    
T  14215344 atttttcgtcctacc 14215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 872 - 982
Target Start/End: Original strand, 24325218 - 24325332
Alignment:
Q  872 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttgt-gca-t 967  Q
    |||||||||||||| | | ||||||| ||||   ||||||||||||||||| || ||||||| ||||||| ||| |||| |||||| ||||||| ||| |    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  968 tttcgtcctaccccc 982  Q
    |||||||||||||||    
T  24325318 tttcgtcctaccccc 24325332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 872 - 982
Target Start/End: Original strand, 24361843 - 24361957
Alignment:
Q  872 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgca-t 967  Q
    |||||||||||||| | | ||||||| ||||   ||||||||||||||||| || ||||||| ||||||| ||| |||| |||||| |||||| |||| |    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  968 tttcgtcctaccccc 982  Q
    |||||||||||||||    
T  24361943 tttcgtcctaccccc 24361957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 29454738 - 29454820
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| |||||| ||||||||||  | |||||||| |||| | |||||| || ||||||| |||||||||| ||||||||||||    
T  29454738 aaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtc 29454820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 29455289 - 29455207
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| |||||||||| |||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  29455289 aaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtc 29455207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 8460933 - 8461010
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||  |||| ||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  8460933 ttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 8461010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 941
Target Start/End: Complemental strand, 4222264 - 4222192
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| |||||||||||  ||  | |||||| || ||||||| |||||||||| |||||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaa 4222192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 828 - 866
Target Start/End: Complemental strand, 15079059 - 15079021
Alignment:
Q  828 aataaactttacctcaaagttacattacaaatttaaaag 866  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15079059 aataaactttacctcaaagttacaatgcaaatttaaaag 15079021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 942
Target Start/End: Complemental strand, 7349559 - 7349486
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||| |||||||||||  ||| | |||||| || || |||  |||||||||| ||||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaac 7349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 866 - 946
Target Start/End: Original strand, 41046700 - 41046780
Alignment:
Q  866 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  41046700 ggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtc 41046780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 862 - 946
Target Start/End: Complemental strand, 20841110 - 20841026
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| ||||||||||||    
T  20841110 aaaaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtc 20841026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 17464494 - 17464571
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||| ||||||| |||||||||| ||||||||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtc 17464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 862 - 946
Target Start/End: Original strand, 32534955 - 32535039
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||||||| ||||||||||| | || | |||||| || || ||||||||||||||| ||||||||||||    
T  32534955 aaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtc 32535039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 860 - 946
Target Start/End: Original strand, 5136974 - 5137060
Alignment:
Q  860 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||||||| ||||||||||| || | | |||||| || ||||||| |||||||||| ||||||||||||    
T  5136974 ttaataggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtc 5137060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 4275906 - 4275829
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||  |||||||||| ||||||||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtc 4275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 20840563 - 20840640
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||| | ||||||||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtc 20840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 982
Target Start/End: Complemental strand, 24301098 - 24300981
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||| |||| |||||| |||||| |||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  966 a-ttttcgtcctaccccc 982  Q
    | ||||||||||||||||    
T  24300998 atttttcgtcctaccccc 24300981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 31779194 - 31779117
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 31779117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 32535505 - 32535428
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 32535428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 43973444 - 43973521
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| |||| ||||| |||||||||| ||||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtc 43973521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 862 - 946
Target Start/End: Original strand, 37726925 - 37727009
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||||||||| |||||||||||  ||  ||||||||||| |  |||| |||||||||||||||||||||||    
T  37726925 aaaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtc 37727009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 863 - 946
Target Start/End: Original strand, 39555575 - 39555658
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  39555575 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtc 39555658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 27393659 - 27393741
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | || |||||| || |||| |||||||||| ||||||||||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtc 27393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 25853237 - 25853314
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || ||||||| |||||||| | ||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtc 25853314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 39556119 - 39556042
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtc 39556042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 43973982 - 43973905
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  |||| |||||||||| ||||||||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtc 43973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 869 - 941
Target Start/End: Complemental strand, 51474876 - 51474804
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||||| ||||||||| | || | |||||| || ||||||| ||||||||||||||||||    
T  51474876 ttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaa 51474804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 864 - 943
Target Start/End: Complemental strand, 27394124 - 27394045
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacg 943  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||  | || ||||||||||||||| |||||||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacg 27394045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 869 - 948
Target Start/End: Complemental strand, 29801958 - 29801879
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    ||||||||||||||| | ||||| ||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||||    
T  29801958 ttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctt 29801879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 863 - 946
Target Start/End: Original strand, 31778650 - 31778733
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| |||||||||||  ||| | | ||||||| || |||| |||||||||| ||||||||||||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtc 31778733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 866 - 948
Target Start/End: Complemental strand, 25612522 - 25612440
Alignment:
Q  866 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    |||||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||| | |||||||| |||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtctt 25612440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 30098310 - 30098228
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||| ||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtc 30098228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 872 - 946
Target Start/End: Original strand, 48452995 - 48453069
Alignment:
Q  872 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtc 48453069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 22424817 - 22424894
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||||||||||   |||| ||||||||||| |  || | |||||||||| ||||||||||||    
T  22424817 ttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtc 22424894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 942
Target Start/End: Complemental strand, 37222113 - 37222040
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||| |||||||||||||||| | || ||| || || |||| |||||||||| ||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 37727472 - 37727395
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||  |||||||||| ||||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtc 37727395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 870 - 982
Target Start/End: Complemental strand, 22425354 - 22425238
Alignment:
Q  870 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgca 966  Q
    |||||||||||||||| ||||||||| | |||| | ||||| ||| ||||||| || ||||||| ||||||||||| |||| | |||| |||||| ||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  967 -ttttcgtcctaccccc 982  Q
     ||||||||||||||||    
T  22425254 tttttcgtcctaccccc 22425238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 862 - 942
Target Start/End: Original strand, 23644458 - 23644538
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    |||||| ||||||||||||||||| ||||| ||||| |||| | |||||| || || |||| |||||||||| ||||||||    
T  23644458 aaaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaac 23644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 985
Target Start/End: Original strand, 30104485 - 30104605
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| || | |||||| |||| | |||| |||||| |||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  30104585 atttttcgtcctacccccatt 30104605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 51473431 - 51473503
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| |||||||||||  ||||| |||||| || || |||| |||||||||| |||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaa 51473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 869 - 932
Target Start/End: Complemental strand, 23228549 - 23228486
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaac 932  Q
    ||||||||||||||||| | ||||||||| |||| | |||||| |||||||||| |||||||||    
T  23228549 ttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac 23228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 862 - 945
Target Start/End: Original strand, 24300553 - 24300635
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||| || || | |||||||||| || ||||||||    
T  24300553 aaaaggtttaattacatttttggt-ctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggt 24300635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 867 - 941
Target Start/End: Original strand, 32695704 - 32695778
Alignment:
Q  867 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||| ||||||| ||| | ||||| |||| |||||||| |||| ||| |||||||||||| |||||||    
T  32695704 gtttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaa 32695778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 23645007 - 23644930
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||||| ||||||||||| |||| | |||||| || || | || |||||||||| ||||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtc 23644930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 25853769 - 25853692
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | |||||||||||| ||| | ||||||||| || || | |||||||||| ||||||| ||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtc 25853692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 861 - 946
Target Start/End: Original strand, 26274562 - 26274647
Alignment:
Q  861 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||| | || || |||||  ||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  26274562 taaaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 26274647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 914
Target Start/End: Complemental strand, 26837897 - 26837852
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactg 914  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactg 26837852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 29801359 - 29801436
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||  |||||||||| | || | || |||||| || |||| |||||||||| ||||||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtc 29801436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 982
Target Start/End: Complemental strand, 50116951 - 50116834
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc-ttcag-tatcttttttg-tgc 965  Q
    ||||||||||||||| | ||||||||||| | || | |||||| || ||||||| |||| ||| | |||||||||||| ||||| |||| |||||| |||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  966 -attttcgtcctaccccc 982  Q
     |||||||||||||||||    
T  50116851 aattttcgtcctaccccc 50116834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 5137523 - 5137446
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| |  |||| |||||||| | ||||||| ||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtc 5137446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 865 - 946
Target Start/End: Original strand, 26837359 - 26837440
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||| ||||||| || || ||||| |||| | |||||| || || |||| ||||| |||||||| ||||||||    
T  26837359 aggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtc 26837440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 863 - 946
Target Start/End: Original strand, 37786764 - 37786847
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||||||||||||||||    
T  37786764 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtc 37786847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 865 - 946
Target Start/End: Original strand, 19830419 - 19830500
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  19830419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtc 19830500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 19590528 - 19590605
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 19590605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 19591067 - 19590990
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 19590990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 34534333 - 34534256
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||  ||||||||| ||||||||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtc 34534256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 863 - 979
Target Start/End: Complemental strand, 19830967 - 19830848
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttt 960  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | || |||||| || || | |||||||||||||||||||||| |||| | |||| ||||    
T  19830967 aaaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttt 19830868  T
Q  961 tg-tgcattttcgtcctacc 979  Q
    || |||||||| ||||||||    
T  19830867 tgttgcatttttgtcctacc 19830848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 4641438 - 4641520
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||||| ||||||||||| | || | ||||||||| || |||  |||| ||||||||||||||||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtc 4641520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 23952733 - 23952811
Alignment:
Q  869 ttaattacacttttggttctcgtgttttg-ccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| ||||| | |||||| || ||||||| |||||||||| ||||||||||||    
T  23952733 ttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtc 23952811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 862 - 948
Target Start/End: Complemental strand, 29100400 - 29100314
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    |||||||||||||||||||||||| |||||||||||  ||| | || ||| || || |||| |||||||||| ||||||||||||||    
T  29100400 aaaaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctt 29100314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 32004617 - 32004694
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| ||||| |||| |||||||||| ||||||| ||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtc 32004694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 35289443 - 35289366
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 35289366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 38859183 - 38859106
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtc 38859106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 879 - 946
Target Start/End: Original strand, 29099863 - 29099930
Alignment:
Q  879 ttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtc 29099930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 2659382 - 2659305
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| |||| |||||| |||||| | ||||||| || |||| |||||||||| ||||||||||||    
T  2659382 ttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtc 2659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 32005156 - 32005079
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||| ||||||| | || | ||||||||| ||||||| |||||||| | ||||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtc 32005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 34533794 - 34533871
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||  |||||||||| || |||| ||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtc 34533871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 863 - 946
Target Start/End: Original strand, 38858640 - 38858723
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||| ||||||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| ||||||||||||    
T  38858640 aaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtc 38858723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 2658842 - 2658919
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||| || ||||||||||| |||| | ||||||||| || |||| |||||||| | ||||||| ||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtc 2658919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 35288906 - 35288983
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||  |||| ||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtc 35288983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 865 - 933
Target Start/End: Complemental strand, 4478246 - 4478178
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaaca 933  Q
    |||||||| |||||||||| | ||||||||||| |||| | ||||||||| || |||| ||||||||||    
T  4478246 aggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaaca 4478178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 941
Target Start/End: Complemental strand, 28584464 - 28584392
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    |||||||||||||| || |||||| |||| |||||| |||||| || ||||| | |||||||||| |||||||    
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaa 28584392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 945
Target Start/End: Complemental strand, 37787309 - 37787233
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| || |||  ||||||| || |||||||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggt 37787233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 38160954 - 38161026
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| |||| |||||| |||| | |||||| | ||| |||| |||||||||| |||||||    
T  38160954 ttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaa 38161026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 11165 - 11088
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||||||||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtc 11088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 2e-21; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 865 - 946
Target Start/End: Complemental strand, 54995613 - 54995532
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||| | ||||||||||||    
T  54995613 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtc 54995532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 860 - 946
Target Start/End: Complemental strand, 12234880 - 12234794
Alignment:
Q  860 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| || ||||||| ||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||||| ||||||||||||    
T  12234880 ttaaatggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtc 12234794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 20471053 - 20470976
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| |||| || |||||||||| ||||||||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtc 20470976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 18751597 - 18751679
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||||| ||||||||||| |||| | |  |||||| ||||||| |||||||||| ||||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtc 18751679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 865 - 946
Target Start/End: Complemental strand, 4220105 - 4220024
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||||| ||||||||||| |||| | |||||||||||| |||  |||||||||| ||||||| ||||    
T  4220105 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtc 4220024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 15523238 - 15523315
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 15523315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 23494985 - 23494908
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 23494908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 45082966 - 45082889
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| ||||||| |||||||||| ||||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 45082889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 862 - 946
Target Start/End: Complemental strand, 22170485 - 22170402
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | |||||| || || ||||||||||||||| ||||||||||||    
T  22170485 aaaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtc 22170402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 869 - 948
Target Start/End: Complemental strand, 25447778 - 25447699
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    |||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctt 25447699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 48526729 - 48526646
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||| ||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  48526729 aaaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtc 48526646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 869 - 943
Target Start/End: Complemental strand, 11153689 - 11153615
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacg 943  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacg 11153615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 12234332 - 12234409
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||| ||||||| | |||| ||||||||| || |||| |||||||||| ||||||||||||    
T  12234332 ttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 12234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 18764062 - 18763985
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||| | |||||||||| ||||||| ||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtc 18763985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 22434182 - 22434259
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||    
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 22434259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 25447250 - 25447327
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||||| ||||||||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtc 25447327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 46193947 - 46193870
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtc 46193870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 865 - 985
Target Start/End: Complemental strand, 22434722 - 22434599
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc-ttc-agtatcttttttg 962  Q
    ||||||||||||| ||||||| ||||||||||| |||| | ||||||||| || |||| |||| ||||| |||||||||||| ||| | |||| ||||||    
T  22434722 aggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcatttttg 22434624  T
Q  963 -tgca-ttttcgtcctacccccatt 985  Q
     |||| |||||||||||||||||||    
T  22434623 ttgcatttttcgtcctacccccatt 22434599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 869 - 985
Target Start/End: Original strand, 48526199 - 48526319
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||||||||||||||| |||| | | |||||||    |||| |||||||||| ||||||||||| |||| | |||| |||||| |||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  48526299 atttttcgtcctacccccatt 48526319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 863 - 985
Target Start/End: Complemental strand, 2118843 - 2118717
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc-ttc-agtatcttttt 960  Q
    |||||||||||||||||||||||  |||||||||| |||  | | ||||||| || |  | ||||||||||||||||||||||| ||| | |||| ||||    
T  2118843 aaaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttt 2118744  T
Q  961 tg-tgca-ttttcgtcctacccccatt 985  Q
    || |||| |||||||||||||||||||    
T  2118743 tgttgcatttttcgtcctacccccatt 2118717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 982
Target Start/End: Complemental strand, 15523781 - 15523659
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatctttttt 961  Q
    |||| |||||||||||||||||  ||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||| ||| |||| |||||| |||||    
T  15523781 aaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattttt 15523682  T
Q  962 g-tgca-ttttcgtcctaccccc 982  Q
    | |||| ||||||||||||||||    
T  15523681 gttgcatttttcgtcctaccccc 15523659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 864 - 933
Target Start/End: Complemental strand, 16318323 - 16318254
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaaca 933  Q
    |||| ||||||||||||||||| ||||||||||| |||| | || ||||||||| |||| ||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaaca 16318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 25937673 - 25937750
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| ||||||||||  |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 25937750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 33110006 - 33109929
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||| ||||||| |||  | |||||| || || |||| |||||||||||||||||||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtc 33109929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 38962361 - 38962284
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| |||||||||||  ||||| ||||||||| ||  ||| |||||||||| ||||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtc 38962284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 46193408 - 46193485
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||| ||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtc 46193485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 51021337 - 51021260
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtc 51021260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 865 - 946
Target Start/End: Original strand, 54995068 - 54995149
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||||| ||||||| ||| |||| | ||||||||  || | || |||||||||| ||||||||||||    
T  54995068 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtc 54995149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 2118296 - 2118368
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| || |||||||| |||| | |||||| || || |||| ||||||||||||||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaa 2118368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 863 - 942
Target Start/End: Complemental strand, 25938219 - 25938140
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||| ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| ||||||||    
T  25938219 aaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaac 25938140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 942
Target Start/End: Original strand, 4219560 - 4219633
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||| || |||| |||||||| | ||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaac 4219633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 23494446 - 23494523
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||| |||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtc 23494523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 33109687 - 33109764
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| ||||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtc 33109764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 862 - 946
Target Start/End: Original strand, 11153142 - 11153226
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||| ||||||||| ||||||||||| |||| | || ||| || ||||||| |||||||| | || |||||||||    
T  11153142 aaaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtc 11153226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 48293597 - 48293669
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| ||||||||||| | || | |||||| ||||| || || ||||||||| |||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaa 48293669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 863 - 941
Target Start/End: Original strand, 16690933 - 16691011
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||| ||||||| || ||||||||  ||| | |||||| || || ||||| ||||||||| |||||||    
T  16690933 aaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaa 16691011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 942
Target Start/End: Original strand, 48708298 - 48708371
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||| |  |||||||| ||||   |||||| ||||| |||| |||||||||| ||||||||    
T  48708298 ttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaac 48708371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 42167 - 42249
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||| ||||||||||||||  ||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  42167 aaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtc 42249  T

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Target: scaffold0027; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 985
Target Start/End: Complemental strand, 42700 - 42580
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttcag-tatcttttttg-tgc 965  Q
    ||||||| ||||||||  |||||||||||  ||| | | |||||||||  |||| |||||||||| ||||||||||| |||||| |||| |||||| | |    
T  42700 ttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttc 42601  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  42600 atttttcgtcctacccccatt 42580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 1e-19; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 867 - 945
Target Start/End: Original strand, 18504920 - 18504998
Alignment:
Q  867 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| |||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggt 18504998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 11445529 - 11445452
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| ||||||||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtc 11445452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 23075670 - 23075593
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 23075593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 20741652 - 20741569
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  20741652 aaaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtc 20741569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 15828188 - 15828106
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| |||| || |||||||||| ||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtc 15828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 2319675 - 2319752
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 2319752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 10900472 - 10900395
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||| ||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 10900395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 12935160 - 12935237
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 12935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 22219895 - 22219818
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 22219818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 868 - 946
Target Start/End: Original strand, 10899941 - 10900019
Alignment:
Q  868 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 10900019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 23073997 - 23074079
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||| | ||||||||||||    
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtc 23074079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 4811798 - 4811721
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||| | ||||||||||| |||| | | |||||||||||||| ||||||||||| ||||||||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtc 4811721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 982
Target Start/End: Complemental strand, 11277124 - 11277007
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacgg-tcttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||| ||||| | |||| |||||| |||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  966 a-ttttcgtcctaccccc 982  Q
    | ||||||||||||||||    
T  11277024 atttttcgtcctaccccc 11277007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 12935699 - 12935622
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || ||||||| ||||||| ||||||||||||    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtc 12935622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 18257140 - 18257217
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 18257217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 18257679 - 18257602
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 18257602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 942
Target Start/End: Complemental strand, 18505461 - 18505388
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||| ||||||||| |||||||||||  ||| | |||||||||||| |||| |||||||||||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaac 18505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 20741103 - 20741180
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtc 20741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 867 - 946
Target Start/End: Complemental strand, 2322762 - 2322683
Alignment:
Q  867 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||  ||||||||||  ||| | ||||||||  || ||||||||||||||| ||||||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtc 2322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 942
Target Start/End: Original strand, 31470313 - 31470391
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    |||| ||||||||||||||| | ||||||||||| |||| | ||||||||| ||||||  |||||||||| ||||||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaac 31470391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 1149468 - 1149545
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtc 1149545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 1149974 - 1149897
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||  |||| | | ||||||| ||||||| |||||||| | ||||||||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtc 1149897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 985
Target Start/End: Original strand, 28472640 - 28472760
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc-ttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| || | | |||||| || || |||| |||||||||| ||||||| |||| ||| | |||| |||||| |||    
T  28472640 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 28472739  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  28472740 atttttcgtcctacccccatt 28472760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 985
Target Start/End: Original strand, 29859829 - 29859949
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc-ttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| ||||||||||| || | | |||||| || || |||| |||||||||| ||||||| |||| ||| | |||| |||||| |||    
T  29859829 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 29859928  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  29859929 atttttcgtcctacccccatt 29859949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 864 - 941
Target Start/End: Complemental strand, 3835273 - 3835196
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    |||||||||||||||||||||| |  |||||||| |||| | |||||| || || ||||| ||||||||| |||||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaa 3835196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 31470858 - 31470781
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| || |||||||  |||| | ||||||||| |  |||| |||||||||| ||||||||||||    
T  31470858 ttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtc 31470781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 869 - 940
Target Start/End: Original strand, 15827641 - 15827712
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaa 940  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| |  || | |||||||||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaa 15827712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 11444990 - 11445067
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||| ||| || ||||  ||||||||| || |||| ||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtc 11445067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 942
Target Start/End: Original strand, 29033437 - 29033510
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||| ||||| ||||| |||  | |||||| || || |||| |||||||||| ||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaac 29033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 2209 - 2132
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| ||||||||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtc 2132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 1670 - 1742
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||| |||||||||| |||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 1742  T

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Target: scaffold0295 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 4796 - 4873
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 4873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 945
Target Start/End: Complemental strand, 5333 - 5257
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || || | |||||||||| || ||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggt 5257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 861 - 946
Target Start/End: Complemental strand, 28793 - 28708
Alignment:
Q  861 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||  ||||||||||||||||  |||||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  28793 taaaaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtc 28708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 4e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 11091062 - 11090985
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 11090985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 22374323 - 22374400
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 22374400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 863 - 948
Target Start/End: Complemental strand, 40027688 - 40027603
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtctt 948  Q
    ||||||||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||||    
T  40027688 aaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctt 40027603  T

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Target: chr2; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 858 - 946
Target Start/End: Original strand, 11090513 - 11090601
Alignment:
Q  858 atttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| ||||||||||||    
T  11090513 atttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtc 11090601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 869 - 945
Target Start/End: Original strand, 40815348 - 40815424
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| ||||||||||||||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggt 40815424  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 590 - 676
Target Start/End: Complemental strand, 9363293 - 9363209
Alignment:
Q  590 taacaaagtgttgaaaaatggcctatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgta 676  Q
    |||||||||||||| ||||||| ||||||| |||||| |||||||| |||||||| ||||||||||   ||||||||||||||||||    
T  9363293 taacaaagtgttgagaaatggcttatatgtcgttaagttgtaaaaagtgttgaaacaatttataat--ctgtgtgattttgtatgta 9363209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 863 - 982
Target Start/End: Original strand, 20444746 - 20444869
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttcag-tatcttttt 960  Q
    ||||| ||||||||||||||||| ||||||||||| || | | ||||||||| || |||| |||||||||| ||||||||||| |||||| |||| ||||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 20444845  T
Q  961 tg-tgca-ttttcgtcctaccccc 982  Q
    || |||| ||||||||||||||||    
T  20444846 tgttgcagttttcgtcctaccccc 20444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 865 - 944
Target Start/End: Complemental strand, 40815891 - 40815812
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacgg 944  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| | ||||| |||||||||| ||||||||||    
T  40815891 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacgg 40815812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 40027138 - 40027220
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| |||||||||||||||||  |||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtc 40027220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 28616616 - 28616693
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtc 28616693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 865 - 985
Target Start/End: Original strand, 3025465 - 3025589
Alignment:
Q  865 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg 962  Q
    |||||| |||||| ||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||||||| |||| |||||| ||||||    
T  3025465 aggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttg 3025564  T
Q  963 -tgca-ttttcgtcctacccccatt 985  Q
     |||| |||||||||||||||||||    
T  3025565 ttgcatttttcgtcctacccccatt 3025589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 414 - 508
Target Start/End: Complemental strand, 9363454 - 9363367
Alignment:
Q  414 ctcagagccagaatagaatattgaagatgaagaaaaaagaaattgaagatcggataccagatgtacgtgtcttcttttcttcccttttatttggt 508  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||||||       ||||||||||| |||||||||||||| |||||||||||||    
T  9363454 ctcaaagccagaatagaatatggtagatgaagaaaaaggaaattgaag-------accagatgtacatgtcttcttttctttccttttatttggt 9363367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 866 - 946
Target Start/End: Original strand, 14432142 - 14432222
Alignment:
Q  866 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||| ||||||||||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtc 14432222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 869 - 941
Target Start/End: Complemental strand, 18451373 - 18451301
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaa 18451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 868 - 950
Target Start/End: Original strand, 8425357 - 8425439
Alignment:
Q  868 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtcttca 950  Q
    |||||||||||||||||| || |||||||| |||| | |||||| || || | ||||||||||||| ||||||||||||||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtcttca 8425439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 18450828 - 18450910
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| ||  ||| |||||||||| ||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtc 18450910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 20440573 - 20440496
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| || | | ||||||||| || |||| |||||||||| ||||||||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 20440496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 22374867 - 22374790
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtc 22374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 26538621 - 26538544
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| | |||||||| ||||||||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtc 26538544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 239356 - 239432
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtc 239432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 1978111 - 1978188
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| || |||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 1978188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 7446888 - 7446811
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||| | ||||||||||||| || | ||||||||| || |||| |||||||||| ||||||||||||    
T  7446888 ttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 7446811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 942
Target Start/End: Complemental strand, 35781205 - 35781132
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| || ||||||| |||||||||| ||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaac 35781132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 43058336 - 43058413
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | ||||||||||| || | | || |||||| || ||||||||||||||| ||||||||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtc 43058413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 15551502 - 15551574
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| |||||||||||   || | |||||| || |||||||||||||||||| |||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaa 15551574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 407
Target Start/End: Original strand, 9295291 - 9295337
Alignment:
Q  361 taaagaaagaatcttggtatgaattgttttgtttccattcattgttt 407  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  9295291 taaagaaagaattttggtatgaattgctttttttccattcattgttt 9295337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 26538095 - 26538177
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| |  |||| |||||||||| |||||| |||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtc 26538177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 946
Target Start/End: Complemental strand, 28617161 - 28617079
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| |  || | |||||||||| ||||||| ||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtc 28617079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 873 - 946
Target Start/End: Complemental strand, 239890 - 239817
Alignment:
Q  873 ttacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||| ||||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtc 239817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 942
Target Start/End: Complemental strand, 1978651 - 1978578
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| ||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaac 1978578  T

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Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 28847237 - 28847160
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||| ||||||| |||||||||||  ||| | ||||||||| || |||  |||||||||| ||||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtc 28847160  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 43058874 - 43058797
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||| ||||    
T  43058874 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtc 43058797  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 933
Target Start/End: Complemental strand, 14432683 - 14432619
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaaca 933  Q
    ||||||||| ||||||| ||||||||||| |||| | | ||||||| ||||||| ||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaaca 14432619  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 869 - 941
Target Start/End: Original strand, 35779711 - 35779783
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 941  Q
    ||||||||||||||||| ||||||||||| | || | |||||| || || |||| |||||||||| |||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaa 35779783  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 7446340 - 7446422
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||| | |||||||||||  ||| | | |||| || || |||| |||||||||| ||||||||||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtc 7446422  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 868 - 942
Target Start/End: Complemental strand, 8425903 - 8425829
Alignment:
Q  868 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||||||||| ||||||||  ||| | |||||| || || |||| |||||||| | ||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaac 8425829  T

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Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 863 - 946
Target Start/End: Complemental strand, 64853 - 64770
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||||||||| ||||||||||| | || | ||||||||| ||  ||| |||||||||| ||||||||||||    
T  64853 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtc 64770  T

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Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 946
Target Start/End: Original strand, 64300 - 64382
Alignment:
Q  864 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||| ||||||||||||||||| ||||||||||| | || | |||||||||||| || | |||||||||| ||||||||||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtc 64382  T

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Target: scaffold1585 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 942
Target Start/End: Original strand, 570 - 643
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaac 942  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| |||||||||| |||||||||| ||||||||    
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaac 643  T

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Target: scaffold0176 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 19163 - 19086
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| ||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtc 19086  T

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Target: scaffold0176; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 863 - 945
Target Start/End: Original strand, 18832 - 18914
Alignment:
Q  863 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt 945  Q
    ||||| || |||||||||||||| ||  ||||||| |||| | ||||||||| || |||| ||||||||||||||||||||||    
T  18832 aaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggt 18914  T

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Target: scaffold0273 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 869 - 982
Target Start/End: Complemental strand, 4749 - 4632
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc--ttcagtatcttttttg-tgc 965  Q
    |||||||||||||||||  |||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||  || | |||| |||||| |||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  966 a-ttttcgtcctaccccc 982  Q
    | ||||||||||||||||    
T  4649 atttttcgtcctaccccc 4632  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 869 - 943
Target Start/End: Complemental strand, 134215 - 134141
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacg 943  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  ||||||| |||||| ||| |||||||||    
T  134215 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacg 134141  T

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Target: scaffold1223 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 756 - 833
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||||||  |||||||||| |||| | |||| |||| || |||| |||||||||| ||||||||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtc 833  T

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Target: scaffold1223; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 1283 - 1206
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||||||||||| || ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 1206  T

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Target: scaffold0432 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 862 - 946
Target Start/End: Original strand, 9928 - 10012
Alignment:
Q  862 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    ||||| |||||||||| ||||||| ||||||||||  |||||| |||||||||||| |||| |||||| | | ||||||| ||||    
T  9928 aaaagatttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtc 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 869 - 985
Target Start/End: Complemental strand, 10414 - 10294
Alignment:
Q  869 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggt-cttc-agtatcttttttg-tgc 965  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| |  | || |||||||||| ||||||||||| |||| | |||| |||||| |||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  966 a-ttttcgtcctacccccatt 985  Q
    | |||||||||||||||||||    
T  10314 atttttcgtcctacccccatt 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 859 - 946
Target Start/End: Complemental strand, 8561 - 8474
Alignment:
Q  859 tttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtc 946  Q
    |||||| ||||||||||||||||||||  || |||||||  ||| ||||||||||| || | || |||||||||| | ||||||||||    
T  8561 tttaaatggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtc 8474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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