View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4607-Insertion-14 (Length: 923)
Name: NF4607-Insertion-14
Description: NF4607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4607-Insertion-14 |
 | |
|
| [»] chr5 (27 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 846; Significance: 0; HSPs: 27)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 846; E-Value: 0
Query Start/End: Original strand, 8 - 923
Target Start/End: Complemental strand, 41367179 - 41366264
Alignment:
| Q |
8 |
cggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41367179 |
cggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatc |
41367080 |
T |
|
| Q |
108 |
aataatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttat |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41367079 |
aataatggtatagaaggatgcaacctcattgtttctttgatgacggattttaagtatatcaattggtgcaactctgtctcattcacatatccctttttat |
41366980 |
T |
|
| Q |
208 |
caaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataacatagcttccgaagatgattgagt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
41366979 |
caaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataacacagcttcagaagatgattgagt |
41366880 |
T |
|
| Q |
308 |
gccaccaacaaacatgtcctgcaaatggattaacggtagccttgtctaatatcaaaccaaaatgaatttcttctatacaagctcaacnnnnnnnnnntgt |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
|
|
| T |
41366879 |
gccaccaacaaacatgtcctgcaaatggattaacggtagccttgtctaatatcaaaccaaaatgaatttcttctatacaaactcaacaaaaaaaaaaaat |
41366780 |
T |
|
| Q |
408 |
tattaatttgatgttccctccaaattactatactggaaattttacttttaagcaaatgaaaaattatgaactatcctttaaattgtgaaaataaatgtgt |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41366779 |
tattaatttgatgttccctccaaattactatactggaaattttacttttaaacaaatgaaaaattatgaactatcctttaaattgtgaaaataaatgtgt |
41366680 |
T |
|
| Q |
508 |
taacatattcgatttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgatttacacgttgaatcttgagaagaac |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41366679 |
taacatattcgatttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgatttacacgttgaatcttgagaagaac |
41366580 |
T |
|
| Q |
608 |
atctactagatcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttca |
707 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41366579 |
atctactagatcatcattcttcctagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttca |
41366480 |
T |
|
| Q |
708 |
agttttttccttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattg |
807 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41366479 |
agttttttccttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattg |
41366380 |
T |
|
| Q |
808 |
ctgatttaaacacttcttggtgtttattcttttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaac |
907 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41366379 |
ctgatttaaacacttcttggtgtttattcttttttccaaatgctgcccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaac |
41366280 |
T |
|
| Q |
908 |
tgatccttcacttgca |
923 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
41366279 |
cgatccttcacttgca |
41366264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 41287191 - 41286926
Alignment:
| Q |
9 |
ggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatca |
108 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| ||||| ||||| || ||||||||||||| ||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
41287191 |
ggatctcttccaattgcccaagcattgacaagaaccctagtcttggccgggatatcatatccattaatttggcatggcttcatactttctcttggaatca |
41287092 |
T |
|
| Q |
109 |
ataatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatc |
208 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||| |||||| |||| |
|
|
| T |
41287091 |
acaatggtatagcaggatgcaacctcattgtttctttgataacagacttcaagtatatcaattggtgcaactctgtctcaaccacatacccctttctatc |
41286992 |
T |
|
| Q |
209 |
aaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatc |
275 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
41286991 |
aaacactcttcttacctcagcttgtgct-tttccatcacctttggattctttaccatctcagacatc |
41286926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 41332997 - 41332723
Alignment:
| Q |
11 |
atctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| | ||| ||||||||||||||| |||||||||||||||| || |
|
|
| T |
41332997 |
atctcttccaatagcccaagcattaaccattacccttgtcttagctgggatttcatacccattaatttggcatggcttcatactttctcttggaattaac |
41332898 |
T |
|
| Q |
111 |
aatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaa |
210 |
Q |
| |
|
|||||| | ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
41332897 |
aatggtgcaacgggatgtaacctcaatgtttctttgacgacagactttaagtatatcaattggtgcaactctgactcatccacatacccctttttatcaa |
41332798 |
T |
|
| Q |
211 |
acactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataaca |
285 |
Q |
| |
|
||||||||||||| |||| |||||| |||||| |||| | || |||||||||||||||||||||| |||||||| |
|
|
| T |
41332797 |
acactcttcttacttcaatctgtgcttcttccaatacctttgggttctttaccatctcagacatcgcccataaca |
41332723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 41329064 - 41328790
Alignment:
| Q |
11 |
atctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaat |
110 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| | ||| ||||||||| || | ||||||||||||||| || |
|
|
| T |
41329064 |
atctcttccaatagcccaagcattaaccattacccttgtcttagctgggatttcatacccattgatttggcatctctccctactttctcttggaactaac |
41328965 |
T |
|
| Q |
111 |
aatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaa |
210 |
Q |
| |
|
|||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
41328964 |
aatggtgcaacgggatgcaacctcaatgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcatccacatactcctttttatcaa |
41328865 |
T |
|
| Q |
211 |
acactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataaca |
285 |
Q |
| |
|
||||||| ||||| ||| |||||||| ||||||||||| | || ||||| |||||||||||||||| |||||||| |
|
|
| T |
41328864 |
acactctacttacttcatcttgtgcttcttccattacctttgggttcttcaccatctcagacatcgcccataaca |
41328790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 9 - 341
Target Start/End: Complemental strand, 41317025 - 41316693
Alignment:
| Q |
9 |
ggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatca |
108 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||| ||||| || ||||| | ||| ||||||||| || | ||||||||||||||| | |
|
|
| T |
41317025 |
ggatctcttccaatagcccaagcattgacagcaacccttgtcttggctggaatctcataaccattgatttggcatctctccctactttctcttggaacta |
41316926 |
T |
|
| Q |
109 |
ataatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatc |
208 |
Q |
| |
|
| ||||| | ||||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
41316925 |
acaatggagcaacaggatacaacctcaatgtttctttgatgacagactttaagtatatcaattggtacaactctgtctcatccacatatccctttttatc |
41316826 |
T |
|
| Q |
209 |
aaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataacatagcttccgaagatgattgagtg |
308 |
Q |
| |
|
||||||||||||||| ||| |||||||| ||||||||| | | || ||||||||| ||||||||| ||| | || ||| || || |||| || ||| |
|
|
| T |
41316825 |
aaacactcttcttacttcagcttgtgcttgttccattacatttgagttttttaccatcgcagacatcgcccaaatcacagcctctgacgatgtttcagta |
41316726 |
T |
|
| Q |
309 |
ccaccaacaaacatgtcctgcaaatggattaac |
341 |
Q |
| |
|
||| || |||||||||||||||||||||||||| |
|
|
| T |
41316725 |
ccagcaccaaacatgtcctgcaaatggattaac |
41316693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 9 - 285
Target Start/End: Complemental strand, 41325089 - 41324813
Alignment:
| Q |
9 |
ggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatca |
108 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | ||| ||||||||| || | ||||||||||||||| | |
|
|
| T |
41325089 |
ggatctcttccaatagcccaagcattaaccatgacccttgtcttagctgggatttcatacccattgatttggcatctctccctactttctcttggaagta |
41324990 |
T |
|
| Q |
109 |
ataatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatc |
208 |
Q |
| |
|
| || |||| | ||||| | |||||||||||| ||||| || || |||||||||||||||||||||||||||||||||| |||| | ||||| |||| |
|
|
| T |
41324989 |
acaacggtacggttggatgtagcctcattgtttccttgatcacagattttaagtatatcaattggtgcaactctgtctcatccacaaaccccttcctatc |
41324890 |
T |
|
| Q |
209 |
aaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataaca |
285 |
Q |
| |
|
||| ||||||||||||||| |||||||| ||||||| ||| | |||||||||||||||||||| |||| |||||||| |
|
|
| T |
41324889 |
aaaaactcttcttacctcagcttgtgcttcttccatcacctttggattctttaccatctcagatatcgcccataaca |
41324813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 9 - 268
Target Start/End: Complemental strand, 41311230 - 41310967
Alignment:
| Q |
9 |
ggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatca |
108 |
Q |
| |
|
|||||||||||||||||||||||| ||| || ||| ||||||||| |||||| |||| ||||| ||||||||| || | ||||||||||||||| | |
|
|
| T |
41311230 |
ggatctcttccaatagcccaagcaataataacgactcttgtcttaattgggatctcatgcctattaatttggcatctctccctactttctcttggaacta |
41311131 |
T |
|
| Q |
109 |
ataatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatat----ccctttt |
204 |
Q |
| |
|
| |||||| | ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||| ||||||| |
|
|
| T |
41311130 |
acaatggtgcaactggatgcaacctcagtgtttctttgatgacaaactttaagtatatcaacaggtgcaactccatctcatccacatatatacccctttt |
41311031 |
T |
|
| Q |
205 |
tatcaaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctc |
268 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||||| | || |||||||||||||| |
|
|
| T |
41311030 |
tatcaaacactcttcttacttcaacttgtgcttcttccattacctttgggttctttaccatctc |
41310967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 9 - 282
Target Start/End: Complemental strand, 41337806 - 41337533
Alignment:
| Q |
9 |
ggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatca |
108 |
Q |
| |
|
|||||||||||||| |||||| |||| ||| |||||||||||||||||||| ||||| | ||| |||| ||| || ||||||||||||||| || |
|
|
| T |
41337806 |
ggatctcttccaattgcccaaacattgacagcaacccttgtcttagctgggatctcatacccattgatttcacatctctctctactttctcttggaacca |
41337707 |
T |
|
| Q |
109 |
ataatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatc |
208 |
Q |
| |
|
| || |||| || |||||| | ||| | ||||||||||||||| ||||||||||| |||| || |||||||||||||| | ||||| ||||||||||| |
|
|
| T |
41337706 |
acaaaggtacagtaggatgtagcctaaatgtttctttgatgacacactttaagtatgtcaactgttgcaactctgtctcgtctacatacccctttttatc |
41337607 |
T |
|
| Q |
209 |
aaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccata |
282 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| || || ||||||| |||||| ||||||| ||||| |
|
|
| T |
41337606 |
aaacactcttcttacctcaacttgtgcttcttccattactattgggttctttatcatctccgacatcgcccata |
41337533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 11 - 339
Target Start/End: Original strand, 31177813 - 31178141
Alignment:
| Q |
11 |
atctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaat |
110 |
Q |
| |
|
|||||||||||| |||||| |||| | | || ||||| ||||||||||| ||||| | ||| ||||||||| || ||||||||||||||||||| |
|
|
| T |
31177813 |
atctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttcatacccattgatttggcatctctctctactttctcttggaatcaac |
31177912 |
T |
|
| Q |
111 |
aatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaa |
210 |
Q |
| |
|
|| |||| ||||||||||||||| | |||||||||||| | ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
31177913 |
aaaggtaaagaaggatgcaaccttaatgtttctttgattatagactttaagtatatcaaatggtgcaactctgtttcatcgacatgcccctttttatcaa |
31178012 |
T |
|
| Q |
211 |
acactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataacatagcttccgaagatgattgagtgcc |
310 |
Q |
| |
|
||||| ||||||| ||| |||||||| | | ||||| | | || ||||||| ||||||||| ||| |||||||| | || | || |||| || || || |
|
|
| T |
31178013 |
acacttttcttacttcagcttgtgcttccttcattatctttgggttctttatcatctcagatatcccccataacacaactcctgatgatgtttcggtacc |
31178112 |
T |
|
| Q |
311 |
accaacaaacatgtcctgcaaatggatta |
339 |
Q |
| |
|
|||||||||||| |||| ||||||||||| |
|
|
| T |
31178113 |
accaacaaacatatcctacaaatggatta |
31178141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 526 - 923
Target Start/End: Complemental strand, 41332484 - 41332084
Alignment:
| Q |
526 |
gactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactagatcatc |
622 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||| || ||||||| ||||| || || | ||||||||||||||||||||||||||||||| || |
|
|
| T |
41332484 |
gactaacctggatgattgatttcatattgtcatcggttaaaggatgttctgagtaataattttcctgttgaatcttgagaagaacatctactagatcttc |
41332385 |
T |
|
| Q |
623 |
attcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttccttggc |
722 |
Q |
| |
|
|| || | |||| ||||||| | ||| ||||||| |||||||| ||||||| |||||||||| ||||||||||| |||||| | ||| || | | |
|
|
| T |
41332384 |
atcgttgcttgcttccttgtgaatgcttctgtgatcgtcgatgatgtcttgcattatcatatcaagctctctatgaattttttccattttggtcttctcc |
41332285 |
T |
|
| Q |
723 |
caacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacactt |
822 |
Q |
| |
|
| ||| | |||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||| || || |||||||||| | ||||| | |
|
|
| T |
41332284 |
ctactcatgcattgaagcattttaatagaaggatacaaatctgcaatttcaaatcctcctaatagcaccaatactttctccattgctgatatgaacacat |
41332185 |
T |
|
| Q |
823 |
cttggtgtttattcttttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaactgatccttcacttgc |
922 |
Q |
| |
|
|||||| | ||||| |||| ||||| |||| ||||||||| |||||| |||| | ||||| |||| | |||||||||| ||||| |||||||||||||| |
|
|
| T |
41332184 |
cttggtttctattccttttcccaaaagctgcccgcgctgttatcccatttgtcattgagaaaatcttccgagtgagatttacaaccgatccttcacttgc |
41332085 |
T |
|
| Q |
923 |
a |
923 |
Q |
| |
|
| |
|
|
| T |
41332084 |
a |
41332084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 526 - 923
Target Start/End: Complemental strand, 41328471 - 41328071
Alignment:
| Q |
526 |
gactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactagatcatc |
622 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||| || ||||||| |||||||| || | ||||||||||||||||||||||||||||||| || |
|
|
| T |
41328471 |
gactaacctggatgattgatttcatattgtcatcggttaaaggatgttctgagtgataattttcctgttgaatcttgagaagaacatctactagatcttc |
41328372 |
T |
|
| Q |
623 |
attcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttccttggc |
722 |
Q |
| |
|
|| || | |||| ||||||| ||||| ||||||| |||||||| ||||| |||||||||| ||||| ||||||||||||| | ||| || | | |
|
|
| T |
41328371 |
atcattgcttgcttccttgtgaatacttctgtgatcgtcgatgatgtcttgtgctatcatatcaatctctgtatgaagtttttccattttggtcttctcc |
41328272 |
T |
|
| Q |
723 |
caacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacactt |
822 |
Q |
| |
|
| | | | | |||||| | |||||||||||||||||||||||||| ||||| ||| |||||| | || || || || ||||| | | ||||| | |
|
|
| T |
41328271 |
ctagtcatccattgaagcaatttaatagaaggatacaaatctgcaatttcaaatcttcctaatagcaccactactttctccaatgctggtatgaacacat |
41328172 |
T |
|
| Q |
823 |
cttggtgtttattcttttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaactgatccttcacttgc |
922 |
Q |
| |
|
|||||||| ||||| |||| ||||| |||| ||||||||| |||||| |||| | ||||| |||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
41328171 |
cttggtgtctattccttttcccaaaagctgcccgcgctgttatcccatttgtcattgagaaaatcttccgagtgagattaacaactgatccttcacttgc |
41328072 |
T |
|
| Q |
923 |
a |
923 |
Q |
| |
|
| |
|
|
| T |
41328071 |
a |
41328071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 11 - 271
Target Start/End: Original strand, 31187876 - 31188136
Alignment:
| Q |
11 |
atctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaat |
110 |
Q |
| |
|
|||||||||||| |||||| |||| | | || ||||| ||||||||||| ||||| | ||| ||||||||| || ||||||||||||||| ||| |
|
|
| T |
31187876 |
atctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttcatacccattgatttggcatctctctctactttctcttggaaccaac |
31187975 |
T |
|
| Q |
111 |
aatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaa |
210 |
Q |
| |
|
|| || | ||||||||| | ||||| ||||||| |||| | |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| |
|
|
| T |
31187976 |
aaaggcacagaaggatgtagcctcaatgtttctctgattatagactttaagtatatcaattggtgcaactctgtttcatcgacatacccctttttatcaa |
31188075 |
T |
|
| Q |
211 |
acactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcaga |
271 |
Q |
| |
|
||||| ||||||| ||| |||||||| ||||||| | | || ||||||||||||||||| |
|
|
| T |
31188076 |
acacttttcttacttcagcttgtgctttctccattatctttgggttctttaccatctcaga |
31188136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 521 - 923
Target Start/End: Complemental strand, 41324578 - 41324173
Alignment:
| Q |
521 |
ttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactaga |
617 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| ||||| || |||||||||||||||| || | ||||||||||||||||||||||||||||| |
|
|
| T |
41324578 |
ttgttgactaacctggatgattgactttatattgtcatcggttaaaggatgttgtgagtgataattttcctgttgaatcttgagaagaacatctactaga |
41324479 |
T |
|
| Q |
618 |
tcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttcc |
717 |
Q |
| |
|
| || | || | | ||| ||||||| | ||||||||||| ||||| || |||||||||||||||||| ||||| | ||||||||||| | |||| || |
|
|
| T |
41324478 |
tattcttcattgctatcttccttgtgaatgcttttgtgatcgtcgataatgtcttgcaatatcatatcaatctctttgtgaagtttttcca-ttttggcc |
41324380 |
T |
|
| Q |
718 |
tt-ggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaa |
816 |
Q |
| |
|
|| | || ||| | |||||| | ||||||||||||||||||||| ||| | ||| |||||||| | | | |||||||| | ||||||||||| |
|
|
| T |
41324379 |
ttcgccctactcacgcattgaagcaatttaatagaaggatacaaatcaacaatacaaatgcctcccaacaaacttactatttcctctactgctgatttaa |
41324280 |
T |
|
| Q |
817 |
acacttcttggtgtttattcttttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaactgatccttc |
916 |
Q |
| |
|
|| || |||||||| || |||| ||||| || | ||||| ||| |||||| ||| | ||||| |||| | |||||||||||||||| ||||||||| |
|
|
| T |
41324279 |
acgattgctggtgtttgctccttttgccaaaagccgcccgcgttgttatcccatatgtcattgagaaaatcttatgagtgagattaacaattgatccttc |
41324180 |
T |
|
| Q |
917 |
acttgca |
923 |
Q |
| |
|
||||||| |
|
|
| T |
41324179 |
acttgca |
41324173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 521 - 923
Target Start/End: Complemental strand, 41316509 - 41316104
Alignment:
| Q |
521 |
ttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactaga |
617 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||| || || || |||||||||||||||| || | ||||||||||||||||||||||||||||| |
|
|
| T |
41316509 |
ttgtggactaacctggatgattgattttatattgtcatcagttaaaggatgttgtgagtgataattttcctgttgaatcttgagaagaacatctactaga |
41316410 |
T |
|
| Q |
618 |
tcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttcc |
717 |
Q |
| |
|
|| |||| || | ||| ||||||| | ||||||||||| |||||||| ||||||||| |||||||| |||| | ||||||||||| | ||| || |
|
|
| T |
41316409 |
tcttcatcattgctttcttccttgtgaatgcttttgtgatcgtcgatgatgtcttgcaatgtcatatcaagctctttgtgaagtttttccattttggtct |
41316310 |
T |
|
| Q |
718 |
ttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaa |
817 |
Q |
| |
|
| | | ||| || |||||| | ||||||||||||| ||||||| ||| | ||| |||||||| | | || ||||| ||||||||| |||| |
|
|
| T |
41316309 |
tcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaacaaacttgctacttcctctattgctgatctaaa |
41316210 |
T |
|
| Q |
818 |
cacttcttggtgtttattcttttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaactgatccttca |
917 |
Q |
| |
|
||||||||||||||| || |||| ||||| || | |||||||| |||||| ||| ||| | |||| | ||||||||||||||||||||||||||| |
|
|
| T |
41316209 |
cacttcttggtgtttgctccttttcccaaaagccgctcgcgctgttatcccatatgtcgttgacaaaatcttctgagtgagattaacaactgatccttca |
41316110 |
T |
|
| Q |
918 |
cttgca |
923 |
Q |
| |
|
|||||| |
|
|
| T |
41316109 |
cttgca |
41316104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 11 - 285
Target Start/End: Complemental strand, 31225902 - 31225628
Alignment:
| Q |
11 |
atctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaat |
110 |
Q |
| |
|
|||||||||||| |||||| |||| | | || ||||| ||||||||||| ||||| | ||| ||||||||| || ||||||||||||||| ||| |
|
|
| T |
31225902 |
atctcttccaattgcccaaacattgatagcaactcttgttttagctgggatttcatacccattgatttggcatctctctctactttctcttggaaccaac |
31225803 |
T |
|
| Q |
111 |
aatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaa |
210 |
Q |
| |
|
|| ||| ||| ||||| || |||| ||||||| | || | |||||||||||||| ||||||||||||||||| |||| |||| |||||||||||||| |
|
|
| T |
31225802 |
aaaggtgcagatggatgtaatctcaatgtttctctaattatagactttaagtatattaattggtgcaactctgtttcatcgacatgtccctttttatcaa |
31225703 |
T |
|
| Q |
211 |
acactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatcgtccataaca |
285 |
Q |
| |
|
||| ||||||| ||| |||||||| | ||||||| | | || ||||||||||||||||| ||| |||||||| |
|
|
| T |
31225702 |
acatgtttcttacttcagcttgtgcttcctccattatctttgggttctttaccatctcagatatcccccataaca |
31225628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 137 - 283
Target Start/End: Complemental strand, 41432112 - 41431966
Alignment:
| Q |
137 |
tgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatcaaacactcttcttacctcaacttgtgct |
236 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| ||||||||| ||||||| |||||| || || ||||||||||||||||||||||| |||||||| |
|
|
| T |
41432112 |
tgtttctttgatgatagacttcaagtatatcaattagtgcaactcagtctcatccacataccctttcatatcaaacactcttcttacctcagcttgtgct |
41432013 |
T |
|
| Q |
237 |
gcttccattaccatcggattctttaccatctcagacatcgtccataa |
283 |
Q |
| |
|
||||||| || |||| ||||| ||||||||||||||| |||||| |
|
|
| T |
41432012 |
tcttccatcacattcgggttcttcgccatctcagacatcgcccataa |
41431966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 589 - 852
Target Start/End: Original strand, 31178408 - 31178671
Alignment:
| Q |
589 |
gttgaatcttgagaagaacatctactagatcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagt |
688 |
Q |
| |
|
|||||||||||| ||| |||| |||||||| |||| ||| | ||| ||||||| | |||| |||||||||| ||| |||||||||||||||||| | |
|
|
| T |
31178408 |
gttgaatcttgataagtgcatcaactagatcttcatccttgctttcttccttgtgaatgtttttatgatcatcgacgatatcttgcaatatcatatcaat |
31178507 |
T |
|
| Q |
689 |
ctctctatgaagtttttcaagttttttccttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagc |
788 |
Q |
| |
|
|||| |||||| ||||||| ||| || | || ||| | | |||||| ||||||||||||||||||| ||| |||| | |||||||||||| | |
|
|
| T |
31178508 |
ctctttatgaaacttttcaaatttggtcttcaccccactcacccgttgaagcattttaatagaaggatacacatcagcaatacaaaatcctcccatcaaa |
31178607 |
T |
|
| Q |
789 |
ttaaatatttccttcattgctgatttaaacacttcttggtgtttattcttttttccaaatgctg |
852 |
Q |
| |
|
| ||||||||| |||||||||| ||||||| ||||||||||||| |||| ||||| |||| |
|
|
| T |
31178608 |
ctcgctatttcctttattgctgattggaacacttgttggtgtttattccttttcccaaacgctg |
31178671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 521 - 706
Target Start/End: Complemental strand, 41310769 - 41310581
Alignment:
| Q |
521 |
ttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactaga |
617 |
Q |
| |
|
|||| |||| |||||||||| ||||| |||||||| || || || ||||||| |||||||| || | ||| ||||||||||||||||||||||||| |
|
|
| T |
41310769 |
ttgtagacttacctggatgattgatttcatattgtcatccgttaaaggatgttctgagtgataattttcctgtttaatcttgagaagaacatctactaga |
41310670 |
T |
|
| Q |
618 |
tcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttc |
706 |
Q |
| |
|
|| |||| || | | ||| |||| || | ||||||||||| |||||||| |||||||||||||||| | ||||| | |||| |||||| |
|
|
| T |
41310669 |
tcttcatcattgctatcttccttgcgaatgcttttgtgatcgtcgatgatgtcttgcaatatcatataaatctctttgtgaactttttc |
41310581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 649 - 814
Target Start/End: Complemental strand, 41369869 - 41369703
Alignment:
| Q |
649 |
ttttgtgatcatcgatgatctcttgcaatatcatatca-gtctctctatgaagtttttcaagttttttccttggccaacttaacatttgaagaattttaa |
747 |
Q |
| |
|
|||||||||||| |||||| ||||||||||| |||||| | || ||| ||||||||||| | ||| || ||| || ||||| | ||||||| ||||||| |
|
|
| T |
41369869 |
ttttgtgatcattgatgatatcttgcaatataatatcatgcctttctctgaagtttttccattttggtctttgccctacttaccctttgaagtattttaa |
41369770 |
T |
|
| Q |
748 |
tagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgattt |
814 |
Q |
| |
|
|||||||||||||||| |||| |||||||| |||||| ||| | | ||||| |||||||||||| |
|
|
| T |
41369769 |
tagaaggatacaaatcagcaatgcaaaatccttccaataactttattgattcctccattgctgattt |
41369703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 589 - 852
Target Start/End: Original strand, 31188453 - 31188716
Alignment:
| Q |
589 |
gttgaatcttgagaagaacatctactagatcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagt |
688 |
Q |
| |
|
||||||||||||||||| ||| |||||||| |||| ||| | ||| ||||||| | |||| |||||| ||||||| |||||||||||||||||| | |
|
|
| T |
31188453 |
gttgaatcttgagaagagtatcaactagatcttcatccttgctttcttccttgtgaatgtttttatgatcaacgatgatatcttgcaatatcatatcaat |
31188552 |
T |
|
| Q |
689 |
ctctctatgaagtttttcaagttttttccttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagc |
788 |
Q |
| |
|
|||| ||||||| ||||||| ||| || | | || ||| | | ||||| ||||||| ||||||||||| ||| |||| | ||||| |||||| | |
|
|
| T |
31188553 |
ctctttatgaagcttttcaactttcgtcttcgccctactcacccattgaaacattttaacagaaggatacacatcagcaatacaaaattctcccagcaaa |
31188652 |
T |
|
| Q |
789 |
ttaaatatttccttcattgctgatttaaacacttcttggtgtttattcttttttccaaatgctg |
852 |
Q |
| |
|
|| ||| ||||| ||||||||||| || |||||||||||||| || |||| ||||| |||| |
|
|
| T |
31188653 |
ctagctatctcctttattgctgatttgaaagcttcttggtgtttactccttttcccaaacgctg |
31188716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 589 - 783
Target Start/End: Complemental strand, 31225360 - 31225166
Alignment:
| Q |
589 |
gttgaatcttgagaagaacatctactagatcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagt |
688 |
Q |
| |
|
|||| |||||||||||| ||| |||||||| |||| ||| | ||| ||||||| | |||| |||||||||||||| |||||||||||||||||| | |
|
|
| T |
31225360 |
gttgtatcttgagaagagtatcaactagatcttcatccttgctttcttccttgtgaatgtttttatgatcatcgatgatatcttgcaatatcatatcaat |
31225261 |
T |
|
| Q |
689 |
ctctctatgaagtttttcaagttttttccttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctccca |
783 |
Q |
| |
|
|||| ||||||| ||||||| ||| || | | || ||| | | |||||| ||||| ||||||||||||| ||| ||| | |||||||||||| |
|
|
| T |
31225260 |
ctctttatgaagcttttcaactttggtcttcgccctactcacccattgaagcatttttatagaaggatacacatcaacaatacaaaatcctccca |
31225166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 693
Target Start/End: Complemental strand, 41337412 - 41337243
Alignment:
| Q |
527 |
actaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtg---atttacacgttgaatcttgagaagaacatctactagatcatca |
623 |
Q |
| |
|
||||||||| ||||| ||||||||||| || || |||||||| ||||||||||| |||| || |||||| ||||||||||||||| ||||| || ||| |
|
|
| T |
41337412 |
actaacctgaatgactgattttatattttcatcagtcaagggttgttgtgagtgaacattttcatgttgaaccttgagaagaacatcaactaggtcttca |
41337313 |
T |
|
| Q |
624 |
ttcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctc |
693 |
Q |
| |
|
| ||| | | ||| ||||| | || | ||||||| |||||| |||||||||||| ||||| |||||| |
|
|
| T |
41337312 |
tccttgcttgttttactgtgattgtttctatgatcattgatgatgtcttgcaatatcctatcaatctctc |
41337243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 738 - 922
Target Start/End: Complemental strand, 41286325 - 41286141
Alignment:
| Q |
738 |
agaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacacttcttggtgtttattct |
837 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| |||||||||||| || | ||| ||||| ||||||| |||| || ||||||||||| | |||| |
|
|
| T |
41286325 |
agaaatttaatagaaggatacaaatcaacaatgcaaaatcctcccatcaggctcaatgcttcctccattgctaatttgaatgcttcttggtgtatgttct |
41286226 |
T |
|
| Q |
838 |
tttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaactgatccttcacttgc |
922 |
Q |
| |
|
|||| ||||| | || ||||| || |||||| ||| ||| | |||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
41286225 |
ttttcccaaaagttgcacgcgccgttatcccataggttgttgacaaaatcttctgagtgagattaacaactgatccttcacttgc |
41286141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 275
Target Start/End: Complemental strand, 14235962 - 14235879
Alignment:
| Q |
192 |
acatatccctttttatcaaacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacatc |
275 |
Q |
| |
|
||||| |||||| |||||||| | |||||||||||| |||||||| ||||||| ||| | || |||||||| |||||||||||| |
|
|
| T |
14235962 |
acatacccctttctatcaaactcccttcttacctcagcttgtgcttcttccatcaccctagggttctttacaatctcagacatc |
14235879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 41305337 - 41305279
Alignment:
| Q |
9 |
ggatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcata |
67 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| ||||| ||||||||||| |||||||| |
|
|
| T |
41305337 |
ggatctcttccaatcgcccaagcattgacaataaccctagtcttagctggaatatcata |
41305279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 852
Target Start/End: Complemental strand, 41337203 - 41337084
Alignment:
| Q |
733 |
tttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacacttcttggtgttt |
832 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||| | ||||| |||||||||| ||| ||||| |||| |||||| |||| || ||||||| | |
|
|
| T |
41337203 |
tttgaagtattttaatagaaggatacaagtcagcaatacaaaattctcccaataggcccaatgcttcctctattgttgatttgaacaattgttggtgtct |
41337104 |
T |
|
| Q |
833 |
attcttttttccaaatgctg |
852 |
Q |
| |
|
|||||||| ||||| |||| |
|
|
| T |
41337103 |
gttctttttcccaaacgctg |
41337084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 649 - 707
Target Start/End: Complemental strand, 41431311 - 41431253
Alignment:
| Q |
649 |
ttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttca |
707 |
Q |
| |
|
|||| ||||||| |||||| |||||||||||| ||||||| |||||| |||||||||| |
|
|
| T |
41431311 |
ttttatgatcattgatgatgtcttgcaatatcgtatcagtttctctacaaagtttttca |
41431253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 17248692 - 17248956
Alignment:
| Q |
10 |
gatctcttccaatagcccaagcattaacaatgacccttgtcttagctgggatatcatatctatttatttggcatggcttcgtactttctcttggaatcaa |
109 |
Q |
| |
|
||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||| | || ||| | ||| | | |||||| ||| |||||||| |
|
|
| T |
17248692 |
gatctcttccaattgcccaaacattaacagcaacccttgtcttagctggaatatcatacccgttgattcgacatttttccctactttgtctaggaatcaa |
17248791 |
T |
|
| Q |
110 |
taatggtatagaaggatgcaacctcattgtttctttgatgacggactttaagtatatcaattggtgcaactctgtctcattcacatatccctttttatca |
209 |
Q |
| |
|
||||||| | |||||||| ||||| ||||||||||||||| || ||||||||||| ||||| | |||||| || |||| ||||| |||||| ||||| |
|
|
| T |
17248792 |
caatggtacaataggatgcagcctcagtgtttctttgatgacagaatttaagtatattaattgatccaactccgtttcatctacatacccctttctatca |
17248891 |
T |
|
| Q |
210 |
aacactcttcttacctcaacttgtgctgcttccattaccatcggattctttaccatctcagacat |
274 |
Q |
| |
|
|| || |||||||||||| |||||||||||||||| ||| | || || |||| ||||||||||| |
|
|
| T |
17248892 |
aaaacacttcttacctcagcttgtgctgcttccatcacctttgggttttttattatctcagacat |
17248956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 521 - 921
Target Start/End: Original strand, 17249070 - 17249473
Alignment:
| Q |
521 |
ttgttgactaacctggatgaccgattttatattgtcgtcggtcaagggatgttgtgagtgat---ttacacgttgaatcttgagaagaacatctactaga |
617 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||| || ||||| | || ||||| || || || | |||||||||||| |||| |||| |||||| |
|
|
| T |
17249070 |
ttgtagactaacctggatgattgattttatattgtcatcagtcaatgaattttgtgggtaatcactttcttgttgaatcttgataagagcatcaactaga |
17249169 |
T |
|
| Q |
618 |
tcatcattcttcccagctttcttgtgactacttttgtgatcatcgatgatctcttgcaatatcatatcagtctctctatgaagtttttcaagttttttcc |
717 |
Q |
| |
|
|| |||| ||| | ||||| || || | | || |||||||||| ||||| |||||||||||||||||| | || |||||||||||||| | ||| | |
|
|
| T |
17249170 |
tcttcatccttgcgtgctttgttttgtccatttctgtgatcatctatgatatcttgcaatatcatatcaatttccctatgaagtttttccattttggttt |
17249269 |
T |
|
| Q |
718 |
ttggccaacttaacatttgaagaattttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaa |
817 |
Q |
| |
|
| | ||||| | ||| ||| ||||| ||||||||||||||||| ||| | ||||||||||||| | | | |||||||| ||||||||||| || |
|
|
| T |
17249270 |
tcacctgacttacccttttaagtattttgatagaaggatacaaatcaacaatacaaaatcctcccaacaaactcactatttcctctattgctgatttgaa |
17249369 |
T |
|
| Q |
818 |
cacttcttggtgtttattcttttttccaaatgctgtccgcgctgtcatcccaattgttaatgagagaatcatttgagtgagattaacaactgatccttca |
917 |
Q |
| |
|
||||| ||||||||| ||| |||| || || |||| ||||| |||||| |||||| || |||| | ||||||||||||||||| |||||||| |
|
|
| T |
17249370 |
cacttgttggtgtttgttccttttcccgaaagctgctcgcgccactatcccatatgttaaagaagaaatcttctgagtgagattaacaacacatccttca |
17249469 |
T |
|
| Q |
918 |
cttg |
921 |
Q |
| |
|
|||| |
|
|
| T |
17249470 |
cttg |
17249473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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